ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-u.5	TPS14	terpene synthase 14
ath-r.7	TPS14	terpene synthase 14
ath-m.9	TPS14	terpene synthase 14
ath-e.2	TPS14	terpene synthase 14
ath-m.4.bio	TPS14	terpene synthase 14
ath-m.4.hor	TPS14	terpene synthase 14
ath-m.4.lig	TPS14	terpene synthase 14
ath-m.4.str	TPS14	terpene synthase 14
ath-m.4.tis	TPS14	terpene synthase 14
bra-r.6	103838436	S-(+)-linalool synthase, chloroplastic
ghi-r.1	107924963	(3S,6E)-nerolidol synthase 1
ghi-r.1	107940942	(3S,6E)-nerolidol synthase 1
cit-r.1	102617908	(3S,6E)-nerolidol synthase 1-like
cit-r.1	102617651	(3S,6E)-nerolidol synthase 1-like
gma-u.5	TPS5	terpene synthase 5
gma-u.5	NES	nerol synthase
vvi-u.5	100852527	(3S,6E)-nerolidol synthase 1, chloroplastic-like
vvi-u.5	100852561	(3S,6E)-nerolidol synthase 1
ppo-u.5	18102943	(3S,6E)-nerolidol synthase 1
mtr-u.5	120575746	(3S,6E)-nerolidol synthase 1
mtr-u.5	120579685	(3S,6E)-nerolidol synthase 1
mtr-u.5	120579435	(3S,6E)-nerolidol synthase 1
sly-u.5	TPS37	(3S,6E)-nerolidol synthase 1-like
sot-r.1	102592813	(3S,6E)-nerolidol synthase 1-like
sot-r.1	102580873	(3S,6E)-nerolidol synthase 1-like
nta-r.1	107828192	(3S,6E)-nerolidol synthase 1
osa-u.5	4328124	S-(+)-linalool synthase, chloroplastic-like
zma-u.5	732759	terpene synthase 3
zma-u.5	732758	terpene synthase 2
tae-r.2	123186200	S-(+)-linalool synthase, chloroplastic
hvu-r.1	123403584	S-(+)-linalool synthase, chloroplastic-like
hvu-r.1	123401580	S-(+)-linalool synthase, chloroplastic-like
sbi-r.1	8085231	S-(+)-linalool synthase, chloroplastic
sbi-r.1	8085232	S-(+)-linalool synthase, chloroplastic
sbi-r.1	8085234	S-(+)-linalool synthase, chloroplastic
bdi-r.1	100823591	S-(+)-linalool synthase, chloroplastic

Annotation

functional annotation

KEGG

ath00902 [list] [network] Monoterpenoid biosynthesis (7 genes)

GO BP

GO:0043693 [list] [network] monoterpene biosynthetic process

(4 genes)

IDA

GO CC

GO:0009507 [list] [network] chloroplast

(5014 genes)

ISM

GO MF

GO:0034007 [list] [network] S-linalool synthase activity

(1 genes)

IDA

Protein

NP_001185286.1 [sequence] [blastp]
NP_176361.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, mito 2, cyto_mito 1, nucl 1	(predict for NP_001185286.1)
chlo 6, mito 1, nucl 1, cyto_mito 1	(predict for NP_176361.2)

Subcellular
localization
TargetP

chlo 9	(predict for NP_001185286.1)
chlo 9	(predict for NP_176361.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for TPS14	ath-r.7 for TPS14	ath-m.9 for TPS14	ath-e.2 for TPS14	ath-m.4.bio for TPS14	ath-m.4.hor for TPS14	ath-m.4.lig for TPS14	ath-m.4.str for TPS14	ath-m.4.tis for TPS14	bra-r.6 for 103838436	ghi-r.1 for 107924963	ghi-r.1 for 107940942	cit-r.1 for 102617908	cit-r.1 for 102617651	gma-u.5 for TPS5	gma-u.5 for NES	vvi-u.5 for 100852527	vvi-u.5 for 100852561	ppo-u.5 for 18102943	mtr-u.5 for 120575746	mtr-u.5 for 120579685	mtr-u.5 for 120579435	sly-u.5 for TPS37	sot-r.1 for 102592813	sot-r.1 for 102580873	nta-r.1 for 107828192	osa-u.5 for 4328124	zma-u.5 for 732759	zma-u.5 for 732758	tae-r.2 for 123186200	hvu-r.1 for 123403584	hvu-r.1 for 123401580	sbi-r.1 for 8085231	sbi-r.1 for 8085232	sbi-r.1 for 8085234	bdi-r.1 for 100823591

Ortholog

Ortholog ID: 925

Species

ath

bra

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

TPS14

NES

TPS37

Function^*

terpene synthase 14

S-(+)-linalool synthase, chloroplastic

(3S,6E)-nerolidol synthase 1

(3S,6E)-nerolidol synthase 1-like

nerol synthase

(3S,6E)-nerolidol synthase 1, chloroplastic-like

(3S,6E)-nerolidol synthase 1

(3S,6E)-nerolidol synthase 1-like

(3S,6E)-nerolidol synthase 1

S-(+)-linalool synthase, chloroplastic-like

terpene synthase 2

terpene synthase 2, chloroplastic-like

S-(+)-linalool synthase, chloroplastic

S-(+)-linalool synthase, chloroplastic-like

S-(+)-linalool synthase, chloroplastic

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00040	Pentose and glucuronate interconversions	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00196	Photosynthesis - antenna proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00909	Sesquiterpenoid and triterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00909	Sesquiterpenoid and triterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00909	Sesquiterpenoid and triterpenoid biosynthesis	3
cit00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00909	Sesquiterpenoid and triterpenoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00904	Diterpenoid biosynthesis	2
gma00909	Sesquiterpenoid and triterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00909	Sesquiterpenoid and triterpenoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	6
ppo00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00073	Cutin, suberine and wax biosynthesis	3
sly00909	Sesquiterpenoid and triterpenoid biosynthesis	2
sly04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00909	Sesquiterpenoid and triterpenoid biosynthesis	3
sot04075	Plant hormone signal transduction	2
sot00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
sot01230	Biosynthesis of amino acids	2
sot00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00909	Sesquiterpenoid and triterpenoid biosynthesis	2
sot00900	Terpenoid backbone biosynthesis	2
sot00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00402	Benzoxazinoid biosynthesis	3
osa00999	Biosynthesis of various plant secondary metabolites	3
osa04075	Plant hormone signal transduction	3
osa00230	Purine metabolism	2
osa00240	Pyrimidine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00402	Benzoxazinoid biosynthesis	2
zma00999	Biosynthesis of various plant secondary metabolites	2
zma00909	Sesquiterpenoid and triterpenoid biosynthesis	2
zma00902	Monoterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00999	Biosynthesis of various plant secondary metabolites	3
zma00402	Benzoxazinoid biosynthesis	2
zma02010	ABC transporters	2
zma04981	Folate transport and metabolism	2
zma00909	Sesquiterpenoid and triterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00902	Monoterpenoid biosynthesis	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00902	Monoterpenoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00902	Monoterpenoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00591	Linoleic acid metabolism	3

Expression

Expression pattern

Entrez Gene ID^*

842465

103838436

107924963

107940942

102617908

102617651

100789381

100852527

18102943

120575746

25481496

25490959

101244812

102592813

102580873

107828192

4328124

732758

103654934

123140864

123403584

110434455

8085230

100823591

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to TPS14 (ath-u.5 coexpression data)

Top 50 enrichment test to TPS14 (ath-u.5 coexpression data)


Species	ath	bra	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre	bna
Paralog	9	1	2	2	2	2	1	3	1	2	1	1	2	1	2	3	1	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to TPS14 (ath-u.5 coexpression data)

Top 50 enrichment test to TPS14 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**