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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT1G62020   Coatomer, alpha subunit 
 ath-r.7   AT1G62020   Coatomer, alpha subunit 
 ath-m.9   AT1G62020   Coatomer, alpha subunit 
 ath-e.2   AT1G62020   Coatomer, alpha subunit 
 ath-m.4.bio   AT1G62020   Coatomer, alpha subunit 
 ath-m.4.hor   AT1G62020   Coatomer, alpha subunit 
 ath-m.4.lig   AT1G62020   Coatomer, alpha subunit 
 ath-m.4.str   AT1G62020   Coatomer, alpha subunit 
 ath-m.4.tis   AT1G62020   Coatomer, alpha subunit 
 ath-u.5   AT2G21390   Coatomer, alpha subunit 
 gma-u.5   100778853   coatomer subunit alpha-1 
 gma-u.5   100784701   coatomer subunit alpha-2 
 gma-u.5   100781504   coatomer subunit alpha-2 
 vvi-u.5   100253944   coatomer subunit alpha-1 
 vvi-u.5   104878556   coatomer subunit alpha-1 
 ppo-u.5   7462537   coatomer subunit alpha-1 
 ppo-u.5   7484772   coatomer subunit alpha-1 
 mtr-u.5   11439634   coatomer subunit alpha-1 
 mtr-u.5   25484848   coatomer subunit alpha-2 
 sly-u.5   101251283   coatomer subunit alpha-1 
 sly-u.5   101264027   coatomer subunit alpha-1-like 
 osa-u.5   4346440   coatomer subunit alpha-3-like 
 osa-u.5   4333886   coatomer subunit alpha-2-like 
 osa-u.5   4333885   coatomer subunit alpha-1-like 
 zma-u.5   100502115   coatomer subunit alpha-3 
 zma-u.5   100384351   coatomer subunit alpha-3 
 zma-u.5   100192909   uncharacterized LOC100192909 

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Top 50 coexpressed genes to AT1G62020 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G62020 (ath-u.5 coexpression data)

CoexMap"842497"


athAT1G62020 | Entrez gene ID : 842497      
Species ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 10 3 2 2 2 2 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (121 genes)  ISS  
GO:0005886 [list] [network] plasma membrane  (2598 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  HDA  
GO MF
GO:0005198 [list] [network] structural molecule activity  (175 genes)  IEA  
Protein NP_176393.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  chlo 2,  nucl_plas 2,  plas 1,  cyto 1,  vacu 1,  E.R. 1,  cysk 1,  golg 1,  E.R._vacu 1,  mito_plas 1,  cyto_E.R. 1  (predict for NP_176393.1)
Subcellular
localization
TargetP
mito 8,  other 3  (predict for NP_176393.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT1G62020

.
ath-r.7
for
AT1G62020

.
ath-m.9
for
AT1G62020

.
ath-e.2
for
AT1G62020

.
ath-m.4.bio
for
AT1G62020

.
ath-m.4.hor
for
AT1G62020

.
ath-m.4.lig
for
AT1G62020

.
ath-m.4.str
for
AT1G62020

.
ath-m.4.tis
for
AT1G62020

.
ath-u.5
for
AT2G21390

.
gma-u.5
for
100778853

.
gma-u.5
for
100784701

.
gma-u.5
for
100781504

.
vvi-u.5
for
100253944

.
vvi-u.5
for
104878556

.
ppo-u.5
for
7462537

.
ppo-u.5
for
7484772

.
mtr-u.5
for
11439634

.
mtr-u.5
for
25484848

.
sly-u.5
for
101251283

.
sly-u.5
for
101264027

.
osa-u.5
for
4346440

.
osa-u.5
for
4333886

.
osa-u.5
for
4333885

.
zma-u.5
for
100502115

.
zma-u.5
for
100384351

.
zma-u.5
for
100192909

.


Ortholog ID: 2127
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit bdi bdi nta nta
Symbol AT1G62020 AT2G21390 LOC100802600 LOC100784701 LOC101264027 LOC101251283 LOC4333885 LOC4333886 LOC100384351 LOC100502115 LOC103828029 LOC103828031 LOC104878556 LOC100253944 LOC7484772 LOC7462537 LOC11439634 LOC25484848 LOC123087109 LOC123099147 LOC123449996 LOC123447450 LOC107949095 LOC107945013 LOC106361358 LOC106365985 CHLRE_13g565850v5 LOC8084335 LOC8063393 LOC102579561 LOC102582145 LOC102619148 LOC100841413 LOC100844017 LOC107801629 LOC107775546
Function* Coatomer, alpha subunit Coatomer, alpha subunit coatomer subunit alpha-2 coatomer subunit alpha-2 coatomer subunit alpha-1-like coatomer subunit alpha-1 coatomer subunit alpha-1-like coatomer subunit alpha-2-like coatomer subunit alpha-3 coatomer subunit alpha-3 coatomer subunit alpha-2 coatomer subunit alpha-2 coatomer subunit alpha-1 coatomer subunit alpha-1 coatomer subunit alpha-1 coatomer subunit alpha-1 coatomer subunit alpha-1 coatomer subunit alpha-2 coatomer subunit alpha-3 coatomer subunit alpha-3 coatomer subunit alpha-3-like coatomer subunit alpha-3 coatomer subunit alpha-1 coatomer subunit alpha-1 coatomer subunit alpha-2-like coatomer subunit alpha-2-like uncharacterized protein coatomer subunit alpha-3 coatomer subunit alpha-3 coatomer subunit alpha-1-like coatomer subunit alpha-1-like coatomer subunit alpha-2 coatomer subunit alpha-3 coatomer subunit alpha-3 coatomer subunit alpha-1 coatomer subunit alpha-1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 4
ath04141 Protein processing in endoplasmic reticulum 2
ath04142 Lysosome 2
ath05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04142 Lysosome 2
ath04144 Endocytosis 2
ath05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00520 Amino sugar and nucleotide sugar metabolism 4
gma00541 Biosynthesis of various nucleotide sugars 2
gma01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma04144 Endocytosis 3
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 4
sly05100 Bacterial invasion of epithelial cells 4
sly04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 4
sly05100 Bacterial invasion of epithelial cells 4
sly04142 Lysosome 3
sly00510 N-Glycan biosynthesis 3
sly04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 3
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 3
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 4
bra04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04142 Lysosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 3
ppo04142 Lysosome 2
ppo05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae00100 Steroid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00520 Amino sugar and nucleotide sugar metabolism 2
bna01250 Biosynthesis of nucleotide sugars 2
bna00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 6
cre00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 4
sot04142 Lysosome 3
sot05100 Bacterial invasion of epithelial cells 3
sot00970 Aminoacyl-tRNA biosynthesis 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04142 Lysosome 4
sot04144 Endocytosis 4
sot00970 Aminoacyl-tRNA biosynthesis 2
sot05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
cit03013 Nucleocytoplasmic transport 2
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 4
bdi04142 Lysosome 2
bdi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 5
bdi04142 Lysosome 2
bdi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00510 N-Glycan biosynthesis 2
nta00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04820 Cytoskeleton in muscle cells 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842497 816678 100802600 100784701 101264027 101251283 4333885 4333886 100384351 100502115 103828029 103828031 104878556 100253944 7484772 7462537 11439634 25484848 123087109 123099147 123449996 123447450 107949095 107945013 106361358 106365985 5719050 8084335 8063393 102579561 102582145 102619148 100841413 100844017 107801629 107775546
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