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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   ACS10   ACC synthase 10 
 ath-r.7   ACS10   ACC synthase 10 
 ath-m.9   ACS10   ACC synthase 10 
 ath-e.2   ACS10   ACC synthase 10 
 ath-m.4.bio   ACS10   ACC synthase 10 
 ath-m.4.hor   ACS10   ACC synthase 10 
 ath-m.4.lig   ACS10   ACC synthase 10 
 ath-m.4.str   ACS10   ACC synthase 10 
 ath-m.4.tis   ACS10   ACC synthase 10 
 ath-u.5   ACS12   1-amino-cyclopropane-1-carboxylate synthase 12 
 gma-u.5   100811906   probable aminotransferase ACS12 
 gma-u.5   100800539   probable aminotransferase ACS12 
 gma-u.5   100783490   probable aminotransferase ACS12 
 vvi-u.5   100251582   probable aminotransferase ACS12 
 vvi-u.5   100244464   probable aminotransferase ACS10 
 ppo-u.5   7481838   probable aminotransferase ACS12 
 ppo-u.5   7465817   probable aminotransferase ACS10 
 mtr-u.5   25497153   probable aminotransferase ACS12 
 mtr-u.5   11436806   probable aminotransferase ACS10 
 sly-u.5   101257494   probable aminotransferase ACS10 
 sly-u.5   101245229   probable aminotransferase ACS12 
 osa-u.5   4340002   1-aminocyclopropane-1-carboxylate synthase 6-like 
 zma-u.5   100279580   1-aminocyclopropane-1-carboxylate synthase3 

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Top 50 coexpressed genes to ACS10 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to ACS10 (ath-u.5 coexpression data)

CoexMap"842598"


athACS10 | Entrez gene ID : 842598      
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 10 3 2 2 2 2 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006520 [list] [network] amino acid metabolic process  (242 genes)  IGI  
GO CC
GO MF
GO:0008793 [list] [network] aromatic-amino-acid transaminase activity  (7 genes)  IGI  
GO:0004069 [list] [network] L-aspartate:2-oxoglutarate aminotransferase activity  (9 genes)  IGI  
GO:0016847 [list] [network] 1-aminocyclopropane-1-carboxylate synthase activity  (11 genes)  IDA  
Protein NP_564804.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  cyto 2,  chlo_mito 2,  nucl 1,  plas 1,  nucl_plas 1,  cyto_E.R. 1  (predict for NP_564804.1)
Subcellular
localization
TargetP
other 9  (predict for NP_564804.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
ACS10
ath-r.7
for
ACS10
ath-m.9
for
ACS10
ath-e.2
for
ACS10
ath-m.4.bio
for
ACS10
ath-m.4.hor
for
ACS10
ath-m.4.lig
for
ACS10
ath-m.4.str
for
ACS10
ath-m.4.tis
for
ACS10
ath-u.5
for
ACS12
gma-u.5
for
100811906
gma-u.5
for
100800539
gma-u.5
for
100783490
vvi-u.5
for
100251582
vvi-u.5
for
100244464
ppo-u.5
for
7481838
ppo-u.5
for
7465817
mtr-u.5
for
25497153
mtr-u.5
for
11436806
sly-u.5
for
101257494
sly-u.5
for
101245229
osa-u.5
for
4340002
zma-u.5
for
100279580


Ortholog ID: 4299
Species ath ath bra bra bna bna ghi ghi cit cit gma gma vvi vvi ppo ppo mtr mtr sly sly sot sot nta nta osa zma tae tae hvu sbi bdi
Symbol ACS10 ACS12 LOC103852131 LOC103838354 LOC106430236 LOC106366537 LOC107944268 LOC121211231 LOC102617765 LOC102624941 LOC100800539 LOC100811906 LOC100251582 LOC100244464 LOC7465817 LOC7481838 LOC11436806 LOC25497153 LOC101257494 LOC101245229 LOC102604058 LOC102600659 LOC107823648 LOC107760426 LOC4340002 LOC100279580 LOC123149202 LOC123165334 LOC123413564 LOC8068383 LOC100828755
Function* ACC synthase 10 1-amino-cyclopropane-1-carboxylate synthase 12 probable aminotransferase ACS12 probable aminotransferase ACS10 probable aminotransferase ACS10 probable aminotransferase ACS10 probable aminotransferase ACS10 probable aminotransferase ACS12 probable aminotransferase ACS10 probable aminotransferase ACS12 probable aminotransferase ACS12 probable aminotransferase ACS12 probable aminotransferase ACS12 probable aminotransferase ACS10 probable aminotransferase ACS10 probable aminotransferase ACS12 probable aminotransferase ACS10 probable aminotransferase ACS12 probable aminotransferase ACS10 probable aminotransferase ACS12 probable aminotransferase ACS12 probable aminotransferase ACS10 putative aminotransferase ACS12 putative aminotransferase ACS12 1-aminocyclopropane-1-carboxylate synthase 6-like 1-aminocyclopropane-1-carboxylate synthase3 probable aminotransferase ACS12 probable aminotransferase ACS12 probable aminotransferase ACS12 probable aminotransferase ACS12 probable aminotransferase ACS12
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03013 Nucleocytoplasmic transport 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 5
bna00330 Arginine and proline metabolism 5
bna00790 Folate biosynthesis 4
bna01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 5
bna00330 Arginine and proline metabolism 5
bna00790 Folate biosynthesis 4
bna01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00220 Arginine biosynthesis 2
ghi00330 Arginine and proline metabolism 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 2
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00010 Glycolysis / Gluconeogenesis 2
mtr01200 Carbon metabolism 2
mtr00620 Pyruvate metabolism 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 2
sly00260 Glycine, serine and threonine metabolism 2
sly00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00290 Valine, leucine and isoleucine biosynthesis 6
sot01230 Biosynthesis of amino acids 6
sot00770 Pantothenate and CoA biosynthesis 4
sot01210 2-Oxocarboxylic acid metabolism 4
sot04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00260 Glycine, serine and threonine metabolism 3
zma01230 Biosynthesis of amino acids 3
zma04712 Circadian rhythm - plant 2
zma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 6
tae04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04814 Motor proteins 3
tae04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842598 835243 103852131 103838354 106430236 106366537 107944268 121211231 102617765 102624941 100800539 100811906 100251582 100244464 7465817 7481838 11436806 25497153 101257494 101245229 102604058 102600659 107823648 107760426 4340002 100279580 123149202 123165334 123413564 8068383 100828755
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