Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   PnsB2   NDH-dependent cyclic electron flow 1 
 ath-r.7   PnsB2   NDH-dependent cyclic electron flow 1 
 ath-m.9   PnsB2   NDH-dependent cyclic electron flow 1 
 ath-e.2   PnsB2   NDH-dependent cyclic electron flow 1 
 ath-m.4.bio   PnsB2   NDH-dependent cyclic electron flow 1 
 ath-m.4.hor   PnsB2   NDH-dependent cyclic electron flow 1 
 ath-m.4.lig   PnsB2   NDH-dependent cyclic electron flow 1 
 ath-m.4.str   PnsB2   NDH-dependent cyclic electron flow 1 
 ath-m.4.tis   PnsB2   NDH-dependent cyclic electron flow 1 
 bra-r.6   103828016   photosynthetic NDH subunit of subcomplex B 2, chloroplastic 
 bna-r.1   106396454   photosynthetic NDH subunit of subcomplex B 2, chloroplastic-like 
 bna-r.1   106349529   photosynthetic NDH subunit of subcomplex B 2, chloroplastic 
 ghi-r.1   107942846   photosynthetic NDH subunit of subcomplex B 2, chloroplastic 
 ghi-r.1   107888432   photosynthetic NDH subunit of subcomplex B 2, chloroplastic 
 cit-r.1   102617967   photosynthetic NDH subunit of subcomplex B 2, chloroplastic 
 gma-u.5   100788455   photosynthetic NDH subunit of subcomplex B 2, chloroplastic 
 gma-u.5   100805680   photosynthetic NDH subunit of subcomplex B 2, chloroplastic 
 ppo-u.5   7491034   photosynthetic NDH subunit of subcomplex B 2, chloroplastic 
 mtr-u.5   11442672   photosynthetic NDH subunit of subcomplex B 2, chloroplastic 
 sly-u.5   101263383   photosynthetic NDH subunit of subcomplex B 2, chloroplastic 
 sot-r.1   102593344   photosynthetic NDH subunit of subcomplex B 2, chloroplastic 
 nta-r.1   107777778   photosynthetic NDH subunit of subcomplex B 2, chloroplastic-like 
 nta-r.1   107814256   photosynthetic NDH subunit of subcomplex B 2, chloroplastic-like 
 osa-u.5   4331681   photosynthetic NDH subunit of subcomplex B 2, chloroplastic 
 zma-u.5   100216780   Photosynthetic NDH subunit of subcomplex B 2 chloroplastic 
 zma-u.5   100278292   uncharacterized LOC100278292 
 tae-r.2   123098473   photosynthetic NDH subunit of subcomplex B 2, chloroplastic 
 tae-r.2   123093208   photosynthetic NDH subunit of subcomplex B 2, chloroplastic 
 tae-r.2   123084883   photosynthetic NDH subunit of subcomplex B 2, chloroplastic 
 hvu-r.1   123449489   photosynthetic NDH subunit of subcomplex B 2, chloroplastic 
 sbi-r.1   8080528   photosynthetic NDH subunit of subcomplex B 2, chloroplastic 
 bdi-r.1   100829462   photosynthetic NDH subunit of subcomplex B 2, chloroplastic 

close


Top 50 coexpressed genes to PnsB2 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to PnsB2 (ath-u.5 coexpression data)

CoexMap"842785"


athPnsB2 | Entrez gene ID : 842785      
Species ath bra bna ghi cit gma ppo mtr sly sot nta osa zma tae hvu sbi bdi vvi cre
Paralog 9 1 2 2 1 2 1 1 1 1 2 1 2 3 1 1 1 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009773 [list] [network] photosynthetic electron transport in photosystem I  (16 genes)  IMP  
GO:0005975 [list] [network] carbohydrate metabolic process  (601 genes)  IEA  
GO CC
GO:0010598 [list] [network] NAD(P)H dehydrogenase complex (plastoquinone)  (13 genes)  IDA IMP  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (314 genes)  IDA  
GO:0009534 [list] [network] chloroplast thylakoid  (417 genes)  HDA IDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA ISM  
GO:0005634 [list] [network] nucleus  (10367 genes)  HDA  
GO MF
GO:0030246 [list] [network] carbohydrate binding  (164 genes)  IEA  
GO:0003824 [list] [network] catalytic activity  (5718 genes)  IEA  
Protein NP_001031233.1 [sequence] [blastp]
NP_001185312.1 [sequence] [blastp]
NP_564840.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 2,  mito 1,  extr 1,  cyto_mito 1,  E.R._vacu 1,  mito_plas 1  (predict for NP_001031233.1)
chlo 5,  mito 3,  extr 1,  cyto_mito 1,  mito_plas 1  (predict for NP_001185312.1)
chlo 5,  vacu 1,  mito 1,  E.R._vacu 1,  nucl 1,  cyto 1,  cyto_nucl 1,  cyto_mito 1,  mito_plas 1  (predict for NP_564840.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_001031233.1)
chlo 7  (predict for NP_001185312.1)
chlo 7  (predict for NP_564840.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
PnsB2
ath-r.7
for
PnsB2
ath-m.9
for
PnsB2
ath-e.2
for
PnsB2
ath-m.4.bio
for
PnsB2
ath-m.4.hor
for
PnsB2
ath-m.4.lig
for
PnsB2
ath-m.4.str
for
PnsB2
ath-m.4.tis
for
PnsB2
bra-r.6
for
103828016
bna-r.1
for
106396454
bna-r.1
for
106349529
ghi-r.1
for
107942846
ghi-r.1
for
107888432
cit-r.1
for
102617967
gma-u.5
for
100788455
gma-u.5
for
100805680
ppo-u.5
for
7491034
mtr-u.5
for
11442672
sly-u.5
for
101263383
sot-r.1
for
102593344
nta-r.1
for
107777778
nta-r.1
for
107814256
osa-u.5
for
4331681
zma-u.5
for
100216780
zma-u.5
for
100278292
tae-r.2
for
123098473
tae-r.2
for
123093208
tae-r.2
for
123084883
hvu-r.1
for
123449489
sbi-r.1
for
8080528
bdi-r.1
for
100829462


Ortholog ID: 11107
Species ath bra bna bna ghi ghi cit gma gma ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol PnsB2 LOC103828016 LOC106396454 LOC106349529 LOC107942846 LOC107888432 LOC102617967 LOC100788455 LOC100805680 LOC7491034 LOC11442672 LOC101263383 LOC102593344 LOC107777778 LOC107814256 LOC4331681 LOC100216780 LOC100278292 LOC123098473 LOC123093208 LOC123084883 LOC123449489 LOC8080528 LOC100829462
Function* NDH-dependent cyclic electron flow 1 photosynthetic NDH subunit of subcomplex B 2, chloroplastic photosynthetic NDH subunit of subcomplex B 2, chloroplastic-like photosynthetic NDH subunit of subcomplex B 2, chloroplastic photosynthetic NDH subunit of subcomplex B 2, chloroplastic photosynthetic NDH subunit of subcomplex B 2, chloroplastic photosynthetic NDH subunit of subcomplex B 2, chloroplastic photosynthetic NDH subunit of subcomplex B 2, chloroplastic photosynthetic NDH subunit of subcomplex B 2, chloroplastic photosynthetic NDH subunit of subcomplex B 2, chloroplastic photosynthetic NDH subunit of subcomplex B 2, chloroplastic photosynthetic NDH subunit of subcomplex B 2, chloroplastic photosynthetic NDH subunit of subcomplex B 2, chloroplastic photosynthetic NDH subunit of subcomplex B 2, chloroplastic-like photosynthetic NDH subunit of subcomplex B 2, chloroplastic-like photosynthetic NDH subunit of subcomplex B 2, chloroplastic Photosynthetic NDH subunit of subcomplex B 2 chloroplastic uncharacterized LOC100278292 photosynthetic NDH subunit of subcomplex B 2, chloroplastic photosynthetic NDH subunit of subcomplex B 2, chloroplastic photosynthetic NDH subunit of subcomplex B 2, chloroplastic photosynthetic NDH subunit of subcomplex B 2, chloroplastic photosynthetic NDH subunit of subcomplex B 2, chloroplastic photosynthetic NDH subunit of subcomplex B 2, chloroplastic
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00630 Glyoxylate and dicarboxylate metabolism 3
ath01200 Carbon metabolism 3
ath00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 7
bra00630 Glyoxylate and dicarboxylate metabolism 6
bra00260 Glycine, serine and threonine metabolism 3
bra00710 Carbon fixation by Calvin cycle 2
bra04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00630 Glyoxylate and dicarboxylate metabolism 8
bna01200 Carbon metabolism 6
bna00020 Citrate cycle (TCA cycle) 4
bna00270 Cysteine and methionine metabolism 4
bna00566 Sulfoquinovose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00630 Glyoxylate and dicarboxylate metabolism 8
bna01200 Carbon metabolism 6
bna00020 Citrate cycle (TCA cycle) 4
bna00270 Cysteine and methionine metabolism 4
bna00566 Sulfoquinovose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
cit00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00260 Glycine, serine and threonine metabolism 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma00670 One carbon pool by folate 2
gma00785 Lipoic acid metabolism 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00710 Carbon fixation by Calvin cycle 2
ppo01200 Carbon metabolism 2
ppo00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 2
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 4
sly00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00710 Carbon fixation by Calvin cycle 2
nta01200 Carbon metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 4
zma00710 Carbon fixation by Calvin cycle 2
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 4
tae01200 Carbon metabolism 4
tae04146 Peroxisome 4
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00710 Carbon fixation by Calvin cycle 2
hvu01200 Carbon metabolism 2
hvu00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 3
bdi00710 Carbon fixation by Calvin cycle 2
bdi01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842785 103828016 106396454 106349529 107942846 107888432 102617967 100788455 100805680 7491034 11442672 101263383 102593344 107777778 107814256 4331681 100216780 100278292 123098473 123093208 123084883 123449489 8080528 100829462
The preparation time of this page was 0.2 [sec].