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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   RHD6   ROOT HAIR DEFECTIVE6 
 ath-r.7   RHD6   ROOT HAIR DEFECTIVE6 
 ath-m.9   RHD6   ROOT HAIR DEFECTIVE6 
 ath-e.2   RHD6   ROOT HAIR DEFECTIVE6 
 ath-m.4.bio   RHD6   ROOT HAIR DEFECTIVE6 
 ath-m.4.hor   RHD6   ROOT HAIR DEFECTIVE6 
 ath-m.4.lig   RHD6   ROOT HAIR DEFECTIVE6 
 ath-m.4.str   RHD6   ROOT HAIR DEFECTIVE6 
 ath-m.4.tis   RHD6   ROOT HAIR DEFECTIVE6 
 mtr-u.5   11426918   putative transcription factor bHLH086 
 osa-u.5   4330488   putative transcription factor bHLH086 
 zma-u.5   103636726   transcription factor BHLH089 

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Top 50 coexpressed genes to RHD6 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to RHD6 (ath-u.5 coexpression data)

CoexMap"842965"


athRHD6 | Entrez gene ID : 842965      
Species ath mtr osa zma tae hvu ghi bdi cit vvi gma bra cre sbi ppo bna sly nta sot
Paralog 9 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0048766 [list] [network] root hair initiation  (20 genes)  IMP  
GO:0048768 [list] [network] root hair cell tip growth  (32 genes)  IEP  
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0046983 [list] [network] protein dimerization activity  (446 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_176820.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  chlo 1,  extr 1  (predict for NP_176820.1)
Subcellular
localization
TargetP
other 8  (predict for NP_176820.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
RHD6

.
ath-r.7
for
RHD6

.
ath-m.9
for
RHD6

.
ath-e.2
for
RHD6

.
ath-m.4.bio
for
RHD6

.
ath-m.4.hor
for
RHD6

.
ath-m.4.lig
for
RHD6

.
ath-m.4.str
for
RHD6

.
ath-m.4.tis
for
RHD6

.
mtr-u.5
for
11426918

.
osa-u.5
for
4330488

.
zma-u.5
for
103636726

.


Ortholog ID: 3504
Species ath osa zma mtr hvu nta
Symbol RHD6 LOC4330488 LOC103636726 LOC11426918 LOC123405617 LOC107785173
Function* ROOT HAIR DEFECTIVE6 putative transcription factor bHLH086 transcription factor BHLH089 putative transcription factor bHLH086 putative transcription factor bHLH086 putative transcription factor bHLH086
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00040 Pentose and glucuronate interconversions 2
ath00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00940 Phenylpropanoid biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842965 4330488 103636726 11426918 123405617 107785173
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