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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   CRF10   Integrase-type DNA-binding superfamily protein 
 ath-r.7   CRF10   Integrase-type DNA-binding superfamily protein 
 ath-e.2   CRF10   Integrase-type DNA-binding superfamily protein 
 ath-u.5   CRF11   Integrase-type DNA-binding superfamily protein 
 ath-u.5   CRF12   AP2 domain-containing transcription factor family protein 
 bra-r.6   103840581   ethylene-responsive transcription factor ERF116 
 bra-r.6   103852490   ethylene-responsive transcription factor ERF118 
 bra-r.6   103830965   ethylene-responsive transcription factor ERF118 
 bna-r.1   106401739   ethylene-responsive transcription factor ERF116 
 bna-r.1   106440173   ethylene-responsive transcription factor ERF118 
 bna-r.1   106411073   ethylene-responsive transcription factor ERF118-like 
 ghi-r.1   107946425   ethylene-responsive transcription factor ERF119 
 ghi-r.1   107894136   ethylene-responsive transcription factor ERF119 
 ghi-r.1   107920596   ethylene-responsive transcription factor ERF119 
 cit-r.1   102611695   ethylene-responsive transcription factor ERF119 
 gma-u.5   102664259   ethylene-responsive transcription factor ERF118 
 gma-u.5   102667919   ethylene-responsive transcription factor ERF118 
 gma-u.5   102660769   ethylene-responsive transcription factor ERF118 
 vvi-u.5   100256010   ethylene-responsive transcription factor ERF118 
 ppo-u.5   7489346   ethylene-responsive transcription factor ERF119 
 ppo-u.5   7483950   ethylene-responsive transcription factor ERF119 
 sly-u.5   CRF10   cytokinin response factor 10 
 sly-u.5   101259143   ethylene-responsive transcription factor ERF119 
 sot-r.1   102596647   ethylene-responsive transcription factor ERF119-like 
 sot-r.1   102603135   ethylene-responsive transcription factor ERF118-like 
 nta-r.1   107778240   ethylene-responsive transcription factor ERF118 
 nta-r.1   107771562   ethylene-responsive transcription factor ERF118 
 nta-r.1   107800804   ethylene-responsive transcription factor ERF119 

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Top 50 coexpressed genes to CRF10 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CRF10 (ath-u.5 coexpression data)

CoexMap"843184"


athCRF10 | Entrez gene ID : 843184      
Species ath bra bna ghi cit gma vvi ppo sly sot nta tae zma bdi osa sbi hvu mtr cre
Paralog 5 3 3 3 1 3 1 2 2 2 3 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  IEA ISS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (716 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_177022.1 [sequence] [blastp]
NP_974106.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 1  (predict for NP_177022.1)
nucl 8,  cyto 1  (predict for NP_974106.1)
Subcellular
localization
TargetP
chlo 6  (predict for NP_177022.1)
chlo 6  (predict for NP_974106.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
CRF10
ath-r.7
for
CRF10
ath-e.2
for
CRF10
ath-u.5
for
CRF11
ath-u.5
for
CRF12
bra-r.6
for
103840581
bra-r.6
for
103852490
bra-r.6
for
103830965
bna-r.1
for
106401739
bna-r.1
for
106440173
bna-r.1
for
106411073
ghi-r.1
for
107946425
ghi-r.1
for
107894136
ghi-r.1
for
107920596
cit-r.1
for
102611695
gma-u.5
for
102664259
gma-u.5
for
102667919
gma-u.5
for
102660769
vvi-u.5
for
100256010
ppo-u.5
for
7489346
ppo-u.5
for
7483950
sly-u.5
for
CRF10
sly-u.5
for
101259143
sot-r.1
for
102596647
sot-r.1
for
102603135
nta-r.1
for
107778240
nta-r.1
for
107771562
nta-r.1
for
107800804


Ortholog ID: 3936
Species ath ath ath bra bra bra bna bna bna ghi ghi ghi cit gma gma gma vvi ppo ppo mtr mtr sly sly sot sot nta nta nta
Symbol CRF10 CRF11 CRF12 LOC103840581 LOC103854399 LOC103875336 LOC106411073 LOC125595210 LOC106394142 LOC107946425 LOC107894136 LOC107920596 LOC102611695 LOC102664259 LOC102667919 LOC100306276 LOC100256010 LOC7489346 LOC7483950 LOC25500574 LOC11439381 CRF10 LOC101259143 LOC102596647 LOC102603135 LOC107778240 LOC107771562 LOC107800804
Function* Integrase-type DNA-binding superfamily protein Integrase-type DNA-binding superfamily protein AP2 domain-containing transcription factor family protein ethylene-responsive transcription factor ERF116 ethylene-responsive transcription factor ERF119 ethylene-responsive transcription factor ERF119 ethylene-responsive transcription factor ERF118-like ethylene-responsive transcription factor ERF119-like ethylene-responsive transcription factor ERF118 ethylene-responsive transcription factor ERF119 ethylene-responsive transcription factor ERF119 ethylene-responsive transcription factor ERF119 ethylene-responsive transcription factor ERF119 ethylene-responsive transcription factor ERF118 ethylene-responsive transcription factor ERF118 ethylene-responsive transcription factor ERF118 ethylene-responsive transcription factor ERF118 ethylene-responsive transcription factor ERF119 ethylene-responsive transcription factor ERF119 ethylene-responsive transcription factor ERF118 ethylene-responsive transcription factor ERF118 cytokinin response factor 10 ethylene-responsive transcription factor ERF119 ethylene-responsive transcription factor ERF119-like ethylene-responsive transcription factor ERF118-like ethylene-responsive transcription factor ERF118 ethylene-responsive transcription factor ERF118 ethylene-responsive transcription factor ERF119
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00510 N-Glycan biosynthesis 6
ghi00230 Purine metabolism 4
ghi00240 Pyrimidine metabolism 4
ghi00500 Starch and sucrose metabolism 4
ghi00740 Riboflavin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00510 N-Glycan biosynthesis 6
ghi00230 Purine metabolism 4
ghi00240 Pyrimidine metabolism 4
ghi00500 Starch and sucrose metabolism 4
ghi00740 Riboflavin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04814 Motor proteins 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 6
gma00970 Aminoacyl-tRNA biosynthesis 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 7
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
mtr00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 6
sly04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 3
sot03010 Ribosome 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
nta00310 Lysine degradation 2
nta03015 mRNA surveillance pathway 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843184 822185 839133 103840581 103854399 103875336 106411073 125595210 106394142 107946425 107894136 107920596 102611695 102664259 102667919 100306276 100256010 7489346 7483950 25500574 11439381 101256485 101259143 102596647 102603135 107778240 107771562 107800804
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