ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-u.5	AT1G70985	hydroxyproline-rich glycoprotein family protein
ath-r.7	AT1G70985	hydroxyproline-rich glycoprotein family protein
ath-m.9	AT1G70985	hydroxyproline-rich glycoprotein family protein
ath-e.2	AT1G70985	hydroxyproline-rich glycoprotein family protein
ath-m.4.bio	AT1G70985	hydroxyproline-rich glycoprotein family protein
ath-m.4.hor	AT1G70985	hydroxyproline-rich glycoprotein family protein
ath-m.4.lig	AT1G70985	hydroxyproline-rich glycoprotein family protein
ath-m.4.str	AT1G70985	hydroxyproline-rich glycoprotein family protein
ath-m.4.tis	AT1G70985	hydroxyproline-rich glycoprotein family protein
gma-u.5	100305848	proline-rich antigen homolog
gma-u.5	100820386	proline-rich antigen homolog
vvi-u.5	104880977	extensin
ppo-u.5	7482881	uncharacterized LOC7482881
sly-u.5	104647274	extensin
sly-u.5	104646795	uncharacterized LOC104646795

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0016020 [list] [network] membrane

(3740 genes)

TAS

GO MF

Protein

NP_565006.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 3, vacu 3, chlo 1, extr 1, E.R._vacu 1, cysk_plas 1, E.R._plas 1, mito_plas 1, cyto_plas 1

(predict for NP_565006.1)

Subcellular
localization
TargetP

scret 9

(predict for NP_565006.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for AT1G70985	ath-r.7 for AT1G70985	ath-m.9 for AT1G70985	ath-e.2 for AT1G70985	ath-m.4.bio for AT1G70985	ath-m.4.hor for AT1G70985	ath-m.4.lig for AT1G70985	ath-m.4.str for AT1G70985	ath-m.4.tis for AT1G70985	gma-u.5 for 100305848	gma-u.5 for 100820386	vvi-u.5 for 104880977	ppo-u.5 for 7482881	sly-u.5 for 104647274	sly-u.5 for 104646795

Ortholog

Ortholog ID: 12487

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

sly

sot

nta

Symbol

Function^*

hydroxyproline-rich glycoprotein family protein

leucine-rich repeat extensin-like protein 3

leucine-rich repeat extensin-like protein 6

nematocyst expressed protein 4-like

leucine-rich repeat extensin-like protein 3

leucine-rich repeat extensin-like protein 5

extensin-1

proline-rich antigen homolog

extensin

uncharacterized LOC7482881

extensin

uncharacterized LOC104646795

leucine-rich repeat extensin-like protein 6

uncharacterized LOC107780188

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00240	Pyrimidine metabolism	2
ghi01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00943	Isoflavonoid biosynthesis	2
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00904	Diterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
nta00940	Phenylpropanoid biosynthesis	2
nta00620	Pyruvate metabolism	2
nta00710	Carbon fixation by Calvin cycle	2
nta01200	Carbon metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

843437

103840799

103831626

106429792

107887629

107921276

102630102

100820386

100305848

104880977

7482881

104647274

104646795

102582490

107780188

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to AT1G70985 (ath-u.5 coexpression data)

Top 50 enrichment test to AT1G70985 (ath-u.5 coexpression data)


Species	ath	gma	vvi	ppo	sly	bdi	mtr	bra	hvu	cit	bna	sbi	ghi	osa	sot	nta	cre	tae	zma
Paralog	9	2	1	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT1G70985 (ath-u.5 coexpression data)

Top 50 enrichment test to AT1G70985 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**