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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   CUC3   NAC (No Apical Meristem) domain transcriptional regulator superfamily protein 
 ath-m.4.bio   CUC3   NAC (No Apical Meristem) domain transcriptional regulator superfamily protein 
 ath-m.4.hor   CUC3   NAC (No Apical Meristem) domain transcriptional regulator superfamily protein 
 ath-m.4.lig   CUC3   NAC (No Apical Meristem) domain transcriptional regulator superfamily protein 
 ath-m.4.str   CUC3   NAC (No Apical Meristem) domain transcriptional regulator superfamily protein 
 ath-m.4.tis   CUC3   NAC (No Apical Meristem) domain transcriptional regulator superfamily protein 
 osa-u.5   4346008   protein CUP-SHAPED COTYLEDON 3 
 zma-u.5   606438   Protein CUP-SHAPED COTYLEDON 3 

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Top 50 coexpressed genes to CUC3 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CUC3 (ath-m.9 coexpression data)

CoexMap"843975"


athCUC3 | Entrez gene ID : 843975      
Species ath osa zma tae mtr bdi vvi sbi ppo bna sly nta cre sot hvu ghi gma cit bra
Paralog 6 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010199 [list] [network] organ boundary specification between lateral organs and the meristem  (9 genes)  IGI  
GO:0010014 [list] [network] meristem initiation  (36 genes)  IGI TAS  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (716 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IDA IPI  
Protein NP_177768.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for NP_177768.1)
Subcellular
localization
TargetP
other 9  (predict for NP_177768.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
CUC3

.
ath-m.4.bio
for
CUC3

.
ath-m.4.hor
for
CUC3

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ath-m.4.lig
for
CUC3

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ath-m.4.str
for
CUC3

.
ath-m.4.tis
for
CUC3

.
osa-u.5
for
4346008

.
zma-u.5
for
606438

.


Ortholog ID: 8773
Species osa zma ghi ghi sbi
Symbol LOC4346008 LOC606438 LOC107917103 LOC107905712 LOC8064020
Function* protein CUP-SHAPED COTYLEDON 3 Protein CUP-SHAPED COTYLEDON 3 protein CUP-SHAPED COTYLEDON 3 protein CUP-SHAPED COTYLEDON 3-like protein CUP-SHAPED COTYLEDON 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 4
sbi00280 Valine, leucine and isoleucine degradation 3
sbi00410 beta-Alanine metabolism 3
sbi00640 Propanoate metabolism 3
sbi01200 Carbon metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4346008 606438 107917103 107905712 8064020
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