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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   FTSH12   FTSH protease 12 
 ath-r.7   FTSH12   FTSH protease 12 
 ath-m.9   FTSH12   FTSH protease 12 
 ath-e.2   FTSH12   FTSH protease 12 
 ath-m.4.bio   FTSH12   FTSH protease 12 
 ath-m.4.hor   FTSH12   FTSH protease 12 
 ath-m.4.lig   FTSH12   FTSH protease 12 
 ath-m.4.str   FTSH12   FTSH protease 12 
 ath-m.4.tis   FTSH12   FTSH protease 12 
 gma-u.5   100819005   ATP-dependent zinc metalloprotease FTSH 12, chloroplastic 
 vvi-u.5   100244978   ATP-dependent zinc metalloprotease FTSH 12, chloroplastic 
 ppo-u.5   18102652   ATP-dependent zinc metalloprotease FTSH 12, chloroplastic 
 mtr-u.5   11407282   ATP-dependent zinc metalloprotease FTSH 12, chloroplastic 
 sly-u.5   101256833   ATP-dependent zinc metalloprotease FTSH 12, chloroplastic 

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Top 50 coexpressed genes to FTSH12 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to FTSH12 (ath-u.5 coexpression data)

CoexMap"844294"


athFTSH12 | Entrez gene ID : 844294      
Species ath gma vvi ppo mtr sly bdi hvu bra cit bna sbi ghi osa sot nta cre tae zma
Paralog 9 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045037 [list] [network] protein import into chloroplast stroma  (29 genes)  IMP  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (569 genes)  IMP NAS  
GO CC
GO:0062091 [list] [network] Ycf2/FtsHi complex  (10 genes)  IDA  
GO:0009706 [list] [network] chloroplast inner membrane  (66 genes)  IDA  
GO:0009941 [list] [network] chloroplast envelope  (585 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (2598 genes)  ISM  
GO:0005739 [list] [network] mitochondrion  (4244 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA IDA ISM  
GO:0009536 [list] [network] plastid  (5443 genes)  HDA  
GO MF
GO:0016464 [list] [network] chloroplast protein-transporting ATPase activity  (8 genes)  IDA  
GO:0004176 [list] [network] ATP-dependent peptidase activity  (19 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001321596.1 [sequence] [blastp]
NP_001321597.1 [sequence] [blastp]
NP_565212.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  plas 1,  extr 1  (predict for NP_001321596.1)
chlo 8,  nucl 1,  plas 1,  extr 1,  nucl_plas 1  (predict for NP_001321597.1)
chlo 8,  nucl 1,  plas 1,  extr 1,  nucl_plas 1  (predict for NP_565212.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_001321596.1)
chlo 8  (predict for NP_001321597.1)
chlo 8  (predict for NP_565212.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
FTSH12
ath-r.7
for
FTSH12
ath-m.9
for
FTSH12
ath-e.2
for
FTSH12
ath-m.4.bio
for
FTSH12
ath-m.4.hor
for
FTSH12
ath-m.4.lig
for
FTSH12
ath-m.4.str
for
FTSH12
ath-m.4.tis
for
FTSH12
gma-u.5
for
100819005
vvi-u.5
for
100244978
ppo-u.5
for
18102652
mtr-u.5
for
11407282
sly-u.5
for
101256833


Ortholog ID: 13489
Species ath bra bna bna ghi ghi cit gma vvi ppo mtr sly sot nta nta
Symbol FTSH12 LOC103830476 LOC106405638 LOC106353400 LOC107919911 LOC107895151 LOC102626777 LOC100819005 LOC100244978 LOC18102652 LOC11407282 LOC101256833 LOC102589653 LOC107797813 LOC107807608
Function* FTSH protease 12 ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic-like ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
mtr00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
nta00260 Glycine, serine and threonine metabolism 2
nta00261 Monobactam biosynthesis 2
nta00270 Cysteine and methionine metabolism 2
nta00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844294 103830476 106405638 106353400 107919911 107895151 102626777 100819005 100244978 18102652 11407282 101256833 102589653 107797813 107807608
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