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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   ndhD   NADH dehydrogenase subunit 4 
 zma-r.6   ndhD   NADH dehydrogenase subunit 4 
 osa-u.5   ndhD   NADH dehydrogenase subunit 4 
 ath-u.5   ndhD   NADH dehydrogenase subunit 4 
 gma-u.5   ndhD   NADH dehydrogenase subunit 4 
 sly-u.5   ndhD   NADH-plastoquinone oxidoreductase subunit 4 
 vvi-u.5   ndhD   NADH dehydrogenase subunit 4 
 ppo-u.5   ndhD   NADH dehydrogenase subunit 4 
 mtr-u.5   ndhD   NADH dehydrogenase subunit 4 

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Top 50 coexpressed genes to ndhD (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to ndhD (zma-u.5 coexpression data)

CoexMap"845183"


zmandhD | Entrez gene ID : 845183    
Species zma osa ath gma sly vvi ppo mtr bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 2 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma00190 [list] [network] Oxidative phosphorylation (267 genes)
GO BP
GO CC
GO MF
Protein NP_043087.1 [sequence] [blastp]
Subcellular
localization
wolf
E.R. 3,  chlo 1,  nucl 1,  plas 1,  nucl_plas 1,  cyto 1,  mito 1,  vacu 1,  golg 1,  cysk_nucl 1,  cysk_plas 1  (predict for NP_043087.1)
Subcellular
localization
TargetP
scret 9,  other 3  (predict for NP_043087.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
ndhD
zma-r.6
for
ndhD
osa-u.5
for
ndhD
ath-u.5
for
ndhD
gma-u.5
for
ndhD
sly-u.5
for
ndhD
vvi-u.5
for
ndhD
ppo-u.5
for
ndhD
mtr-u.5
for
ndhD


Ortholog ID: 11815
Species zma sbi osa hvu bdi ath gma sly vvi ppo mtr ghi sot cit nta
Symbol ndhD ndhD ndhD LOC123423806 ndhD ndhD ndhD ndhD ndhD ndhD ndhD ndhD ndhD ndhD ndhD
Function* NADH dehydrogenase subunit 4 NADH dehydrogenase subunit 4 NADH dehydrogenase subunit 4 NAD(P)H-quinone oxidoreductase chain 4, chloroplastic NADH dehydrogenase subunit 4 NADH dehydrogenase subunit 4 NADH dehydrogenase subunit 4 NADH-plastoquinone oxidoreductase subunit 4 NADH dehydrogenase subunit 4 NADH dehydrogenase subunit 4 NADH dehydrogenase subunit 4 NADH dehydrogenase subunit 4 NADH dehydrogenase subunit 4 NADH dehydrogenase subunit 4 NADH dehydrogenase subunit 4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 8
zma00190 Oxidative phosphorylation 4
zma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00195 Photosynthesis 9
sbi00190 Oxidative phosphorylation 7
sbi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 10
osa00970 Aminoacyl-tRNA biosynthesis 3
osa00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 4
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 12
ath00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 12
gma00195 Photosynthesis 6
gma03020 RNA polymerase 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 8
sly00195 Photosynthesis 8
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 10
vvi00195 Photosynthesis 7
vvi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 9
ppo00190 Oxidative phosphorylation 6
ppo03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 10
mtr00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 12
ghi00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 9
sot00190 Oxidative phosphorylation 7
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 6
cit00195 Photosynthesis 6
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 11
nta00190 Oxidative phosphorylation 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 845183 4549152 3131398 123423806 6439837 844756 3989361 3950410 4025039 4929740 5333190 3989241 4099905 4271114 800483
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