ATTED-II : GeneCoexpression result

Species	Gene	Description
osa-u.5	9270706	transcription factor SCREAM2
osa-r.6	9270706	transcription factor SCREAM2
osa-u.5	4351296	transcription factor SCREAM2
osa-u.5	4349582	transcription factor bHLH61
osa-u.5	4338459	transcription factor SCREAM2
zma-u.5	100274843	uncharacterized LOC100274843
ath-u.5	AT2G40435	transcription factor SCREAM-like protein
ath-u.5	AT3G56220	transcription regulator
gma-u.5	100814138	uncharacterized LOC100814138
gma-u.5	100305696	uncharacterized LOC100305696
gma-u.5	100306253	uncharacterized LOC100306253
sly-u.5	101268000	transcription factor bHLH61
vvi-u.5	100245026	uncharacterized LOC100245026
vvi-u.5	100241403	uncharacterized LOC100241403
ppo-u.5	7460428	transcription factor SCREAM2
ppo-u.5	7487355	transcription factor SCREAM2
mtr-u.5	11442077	uncharacterized LOC11442077
mtr-u.5	11434084	uncharacterized LOC11434084

Annotation

functional annotation

KEGG

GO BP

GO:0006355 [list] [network] regulation of DNA-templated transcription

(1615 genes)

IEA

GO CC

GO:0005634 [list] [network] nucleus

(3003 genes)

IEA

GO MF

GO:0046983 [list] [network] protein dimerization activity	(464 genes)	IEA
GO:0043565 [list] [network] sequence-specific DNA binding	(718 genes)	IEA
GO:0003700 [list] [network] DNA-binding transcription factor activity	(1113 genes)	IEA

Protein

XP_015644890.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 5, nucl 1, mito 1, nucl_plas 1, chlo 1, vacu 1, cyto_mito 1

(predict for XP_015644890.1)

Subcellular
localization
TargetP

mito 4

(predict for XP_015644890.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-u.5 for 9270706	osa-r.6 for 9270706	osa-u.5 for 4351296	osa-u.5 for 4349582	osa-u.5 for 4338459	zma-u.5 for 100274843	ath-u.5 for AT2G40435	ath-u.5 for AT3G56220	gma-u.5 for 100814138	gma-u.5 for 100305696	gma-u.5 for 100306253	sly-u.5 for 101268000	vvi-u.5 for 100245026	vvi-u.5 for 100241403	ppo-u.5 for 7460428	ppo-u.5 for 7487355	mtr-u.5 for 11442077	mtr-u.5 for 11434084

Ortholog

Ortholog ID: 1143

Species

osa

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

transcription factor SCREAM2

uncharacterized LOC100836923

uncharacterized LOC100274843

uncharacterized LOC8082324

transcription factor SCREAM-like protein

transcription regulator

uncharacterized LOC100305696

transcription factor bHLH61

uncharacterized LOC103830041

uncharacterized LOC103863111

uncharacterized LOC100245026

uncharacterized LOC7458829

transcription factor SCREAM2

uncharacterized LOC11434084

uncharacterized LOC107933782

uncharacterized LOC106356736

transcription factor SCREAM2-like

transcription factor bHLH61-like

uncharacterized LOC102616900

transcription factor SCREAM2-like

transcription factor bHLH61-like

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00564	Glycerophospholipid metabolism	2
zma00565	Ether lipid metabolism	2
zma00590	Arachidonic acid metabolism	2
zma00591	Linoleic acid metabolism	2
zma00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00942	Anthocyanin biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath02010	ABC transporters	2
ath04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00940	Phenylpropanoid biosynthesis	2
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00562	Inositol phosphate metabolism	3
ppo00564	Glycerophospholipid metabolism	2
ppo00565	Ether lipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr02010	ABC transporters	2
mtr04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00350	Tyrosine metabolism	3
bna00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
bna00270	Cysteine and methionine metabolism	2
bna00360	Phenylalanine metabolism	2
bna00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01200	Carbon metabolism	3
cit00630	Glyoxylate and dicarboxylate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00908	Zeatin biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

4338459

4351296

100836923

100274843

8082324

818637

824788

100305696

101268000

103830041

103863111

100245026

7458829

7460428

11434084

107933782

106356736

102583721

102600920

102616900

107772985

107785356

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 9270706 (osa-u.5 coexpression data)

Top 50 enrichment test to 9270706 (osa-u.5 coexpression data)


Species	osa	zma	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	5	1	2	3	1	2	2	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 9270706 (osa-u.5 coexpression data)

Top 50 enrichment test to 9270706 (osa-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**