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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   9271324   protein PHYTOCHROME-DEPENDENT LATE-FLOWERING 
 osa-r.6   9271324   protein PHYTOCHROME-DEPENDENT LATE-FLOWERING 
 osa-m.8   9271324   protein PHYTOCHROME-DEPENDENT LATE-FLOWERING 
 osa-e.1   9271324   protein PHYTOCHROME-DEPENDENT LATE-FLOWERING 
 tae-r.2   123056601   uncharacterized LOC123056601 
 tae-r.2   123068298   uncharacterized LOC123068298 
 bdi-r.1   100843036   uncharacterized LOC100843036 

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Top 50 coexpressed genes to 9271324 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 9271324 (osa-u.5 coexpression data)

CoexMap"9271324"


osaLOC9271324 | Entrez gene ID : 9271324    
Species osa tae bdi sot sly cit ath bna ppo ghi sbi gma mtr bra hvu vvi zma cre nta
Paralog 4 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (380 genes)  IEA  
GO CC
GO:0000124 [list] [network] SAGA complex  (16 genes)  IEA  
GO MF
GO:0003712 [list] [network] transcription coregulator activity  (107 genes)  IEA  
Protein XP_015643210.1 [sequence] [blastp]
XP_066164558.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  mito 2,  cyto_mito 1,  chlo 1,  cysk 1  (predict for XP_015643210.1)
nucl 4,  mito 3,  cyto_mito 2,  chlo 1,  cysk 1  (predict for XP_066164558.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_015643210.1)
mito 7  (predict for XP_066164558.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
9271324
osa-r.6
for
9271324
osa-m.8
for
9271324
osa-e.1
for
9271324
tae-r.2
for
123056601
tae-r.2
for
123068298
bdi-r.1
for
100843036


Ortholog ID: 18502
Species osa tae tae bdi
Symbol LOC9271324 LOC123056601 LOC123068298 LOC100843036
Function* protein PHYTOCHROME-DEPENDENT LATE-FLOWERING uncharacterized LOC123056601 uncharacterized LOC123068298 uncharacterized LOC100843036
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
tae03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 9271324 123056601 123068298 100843036
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