GO:0000398 mRNA splicing, via spliceosome
172 ath genes in this database. |
[QuickGO]
term: mRNA splicing, via spliceosome
goid: GO:0000398
Shaded genes do not have GeneChip data. The output was limited up to 100 for each of species.
Species | Symbol | Supportability of expression data |
Gene coexpression |
Locus page |
Full name* | Entrez Gene ID | Evidence* |
---|---|---|---|---|---|---|---|
ath | EMB2816 | ☆☆ | Small nuclear ribonucleoprotein family protein | 814913 | IEA | ||
ath | AT2G05720 | Transducin/WD40 repeat-like superfamily protein | 815121 | IBA | |||
ath | ABH1 | ☆☆☆ | ARM repeat superfamily protein | 815840 | |||
ath | OTP51 | ☆☆☆ | endonuclease | 816078 | |||
ath | GRP7 | ☆☆☆ | cold, circadian rhythm, and rna binding 2 | 816705 | |||
ath | SNRNP-G | ☆☆☆ | Putative small nuclear ribonucleoprotein G | 816925 | |||
ath | RSZ22a | ☆☆ | RNA recognition motif and CCHC-type zinc finger domains containing protein | 816995 | |||
ath | MAC5B | ☆☆☆ | CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein | 817507 | IEA | ||
ath | AT2G30000 | ☆ | PHF5-like protein | 817551 | IBA | ||
ath | U2B'' | ☆☆ | U2 small nuclear ribonucleoprotein B | 817576 | IBA | ||
ath | AT2G32600 | ☆☆ | hydroxyproline-rich glycoprotein family protein | 817820 | |||
ath | AT2G33730 | ☆☆☆ | P-loop containing nucleoside triphosphate hydrolases superfamily protein | 817938 | IBA,IMP | ||
ath | RS2Z33 | ☆ | arginine/serine-rich zinc knuckle-containing protein 33 | 818311 | TAS | ||
ath | EMB2765 | ☆☆☆ | P-loop containing nucleoside triphosphate hydrolases superfamily protein | 818459 | IEA | ||
ath | SAC3A | ☆☆☆ | SAC3/GANP/Nin1/mts3/eIF-3 p25 family | 818519 | |||
ath | LIS | ☆ | WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-like protein | 818748 | IBA,ISS | ||
ath | AT2G42270 | ☆☆☆ | U5 small nuclear ribonucleoprotein helicase | 818828 | IBA | ||
ath | AT2G42330 | ☆☆ | GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain-containing protein | 818834 | |||
ath | AT2G43370 | ☆☆ | RNA-binding (RRM/RBD/RNP motifs) family protein | 818938 | IBA | ||
ath | LSM6B | ☆☆☆ | Small nuclear ribonucleoprotein family protein | 818985 | IBA | ||
ath | RS31a | ☆☆ | RNA-binding (RRM/RBD/RNP motifs) family protein | 819273 | |||
ath | U1A | ☆☆ | spliceosomal protein U1A | 819371 | IBA,ISS | ||
ath | AT3G03970 | ☆☆ | ARM repeat superfamily protein | 819552 | |||
ath | AT3G04500 | ☆☆ | RNA-binding (RRM/RBD/RNP motifs) family protein | 819606 | IBA | ||
ath | AT3G07590 | ☆☆☆ | Small nuclear ribonucleoprotein family protein | 819950 | |||
ath | AT3G07860 | ☆☆ | Ubiquitin-like superfamily protein | 819977 | IEA | ||
ath | AT3G09620 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | 820119 | IBA | |||
ath | U11/U12-31K | RNA recognition motif and CCHC-type zinc finger domains containing protein | 820203 | IBA,IMP | |||
ath | EMB2769 | ☆☆ | Cwf15 / Cwc15 cell cycle control family protein | 820510 | |||
ath | AT3G13210 | crooked neck protein, putative / cell cycle protein | 820511 | IBA | |||
ath | SCL30A | ☆☆☆ | SC35-like splicing factor 30A | 820559 | IGI,TAS | ||
ath | AT3G14700 | SART-1 family | 820698 | ||||
ath | AT3G16650 | Transducin/WD40 repeat-like superfamily protein | 820917 | IBA | |||
ath | AT3G18790 | ☆☆☆ | pre-mRNA-splicing factor ISY1-like protein | 821412 | |||
ath | PRP40B | ☆☆☆ | pre-mRNA-processing protein 40B | 821504 | IBA | ||
ath | AT3G23325 | ☆☆☆ | Splicing factor 3B subunit 5/RDS3 complex subunit 10 | 821913 | IBA | ||
ath | AT3G24730 | ☆ | mRNA splicing factor, thioredoxin-like U5 snRNP | 822071 | IEA | ||
ath | AT3G25840 | ☆☆☆ | Protein kinase superfamily protein | 822178 | |||
ath | AT3G26560 | ☆☆☆ | ATP-dependent RNA helicase | 822264 | |||
ath | AT3G44850 | ☆☆ | Protein kinase superfamily protein | 823619 | |||
ath | AT3G45180 | Ubiquitin-like superfamily protein | 823654 | IBA | |||
ath | AT3G45950 | Pre-mRNA splicing Prp18-interacting factor | 823738 | IEA | |||
ath | AT3G47120 | ☆☆☆ | RNA recognition motif (RRM)-containing protein | 823865 | IBA | ||
ath | AT3G48120 | ☆☆ | serine/arginine-rich splicing factor | 823967 | |||
ath | SR34a | ☆☆☆ | SER/ARG-rich protein 34A | 824105 | |||
ath | U1-70K | ☆☆☆ | U1 small nuclear ribonucleoprotein-70K | 824230 | IBA,IDA | ||
ath | AT3G51110 | Tetratricopeptide repeat (TPR)-like superfamily protein | 824275 | IBA | |||
ath | SRPK4 | ☆ | ser/arg-rich protein kinase 4 | 824469 | |||
ath | RS2Z32 | ☆☆ | RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein | 824518 | TAS | ||
ath | SUA | ☆☆☆ | suppressor of abi3-5 | 824590 | IMP | ||
ath | SAP130a | ☆☆☆ | Cleavage and polyadenylation specificity factor (CPSF) A subunit protein | 824686 | IBA | ||
ath | SCL30 | ☆☆ | SC35-like splicing factor 30 | 824712 | TAS | ||
ath | AT3G56790 | RNA splicing factor-like protein | 824846 | IEA | |||
ath | LSM6A | ☆☆☆ | Small nuclear ribonucleoprotein family protein | 825150 | IBA | ||
ath | AT3G61360 | ☆☆ | Tetratricopeptide repeat (TPR)-like superfamily protein | 825308 | IMP | ||
ath | RS31 | ☆☆☆ | RNA-binding (RRM/RBD/RNP motifs) family protein | 825359 | IDA | ||
ath | AT4G01020 | ☆☆☆ | helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-like protein | 826439 | IBA | ||
ath | AT4G14342 | ☆☆ | Splicing factor 3B subunit 5/RDS3 complex subunit 10 | 827077 | IBA | ||
ath | PRL1 | ☆☆ | pleiotropic regulatory locus 1 | 827272 | IBA | ||
ath | AT4G19610 | ☆☆☆ | nucleotide/nucleic acid binding protein | 827703 | |||
ath | AT4G20030 | ☆ | RNA-binding (RRM/RBD/RNP motifs) family protein | 827748 | |||
ath | smB | ☆☆☆ | small nuclear ribonucleoprotein associated protein B | 827792 | IBA,TAS | ||
ath | AT4G21110 | ☆ | G10 family protein | 827859 | IBA | ||
ath | EMB2770 | ☆☆☆ | pre-mRNA splicing factor-like protein | 827925 | IBA,ISS | ||
ath | SR34b | ☆ | RNA-binding (RRM/RBD/RNP motifs) family protein | 828027 | |||
ath | AT4G03120 | ☆☆ | C2H2 and C2HC zinc fingers superfamily protein | 828071 | |||
ath | AT4G22350 | ☆ | Ubiquitin C-terminal hydrolases superfamily protein | 828330 | |||
ath | AT4G22380 | ☆☆☆ | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 828333 | IBA | ||
ath | SIC | ☆☆ | hydroxyproline-rich glycoprotein family protein | 828552 | IMP | ||
ath | RS40 | ☆☆ | arginine/serine-rich splicing factor 35 | 828654 | ISS | ||
ath | RUXF | ☆☆☆ | small nuclear ribonucleoprotein F | 829145 | |||
ath | AT4G30330 | ☆☆☆ | Small nuclear ribonucleoprotein family protein | 829156 | |||
ath | RSZ22 | ☆☆ | serine/arginine-rich 22 | 829285 | TAS | ||
ath | DBR1 | ☆ | debranching enzyme 1 | 829305 | IBA | ||
ath | AT4G32270 | Ubiquitin-like superfamily protein | 829360 | IEA | |||
ath | AT4G33370 | DEA(D/H)-box RNA helicase family protein | 829474 | IBA | |||
ath | ATU2AF65A | ☆☆☆ | U2 snRNP auxilliary factor, large subunit, splicing factor | 829822 | ISS | ||
ath | SMP2 | ☆☆☆ | Pre-mRNA splicing Prp18-interacting factor | 829866 | IEA | ||
ath | AT4G38780 | ☆☆ | pre-mRNA-processing-splicing factor-like protein | 830033 | |||
ath | CCR1 | ☆☆ | cold, circadian rhythm, and RNA binding 1 | 830082 | |||
ath | AT5G04210 | CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein | 830300 | IEA | |||
ath | AT5G05720 | RNA-binding (RRM/RBD/RNP motifs) family protein | 830456 | ||||
ath | ATO | ☆☆☆ | splicing factor-like protein | 830503 | IBA | ||
ath | MAC5C | CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein | 830597 | IEA | |||
ath | YLS8 | ☆☆☆ | mRNA splicing factor, thioredoxin-like U5 snRNP | 830725 | IEA | ||
ath | ILP1 | ☆☆☆ | GC-rich sequence DNA-binding factor-like protein | 830755 | IMP | ||
ath | AT5G10370 | ☆☆☆ | helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-like protein | 830901 | IBA | ||
ath | EMB3011 | ☆☆☆ | RNA helicase family protein | 831141 | IBA | ||
ath | ELF9 | ☆☆☆ | RNA binding (RRM/RBD/RNP motifs) family protein | 831486 | IEA | ||
ath | DOT2 | ☆☆☆ | SART-1 family | 831541 | |||
ath | AT5G17440 | ☆☆ | LUC7 related protein | 831610 | |||
ath | SCL28 | SC35-like splicing factor 28 | 831999 | TAS | |||
ath | AT5G22840 | ☆☆☆ | Protein kinase superfamily protein | 832347 | |||
ath | AT5G25230 | Ribosomal protein S5/Elongation factor G/III/V family protein | 832594 | IBA | |||
ath | AT5G25340 | Ubiquitin-like superfamily protein | 832606 | IEA | |||
ath | emb1644 | ☆☆ | Small nuclear ribonucleoprotein family protein | 832834 | |||
ath | AT5G28740 | ☆☆☆ | Tetratricopeptide repeat (TPR)-like superfamily protein | 832986 | IBA | ||
ath | AT5G41690 | RNA-binding (RRM/RBD/RNP motifs) family protein | 834172 | IBA | |||
ath | AT5G41770 | ☆☆☆ | crooked neck protein, putative / cell cycle protein | 834182 | IBA | ||
ath | UBL5 | ☆☆☆ | ubiquitin-like protein 5 | 834235 | IBA |