GO:0006397 mRNA processing
| 183 ath genes in this database. |
| 1 osa genes in this database. |
[QuickGO]
term: mRNA processing
goid: GO:0006397
Shaded genes do not have GeneChip data. The output was limited up to 100 for each of species.
| Species | Symbol | Gene coexpression |
Locus page |
Full name* | Entrez Gene ID | Evidence* |
|---|---|---|---|---|---|---|
| ath | EMB2794 | Tetratricopeptide repeat (TPR)-like superfamily protein | 814746 | |||
| ath | AT2G02570 | nucleic acid binding/RNA binding protein | 814787 | IMP | ||
| ath | RNEE/G | RNAse E/G-like protein | 814965 | |||
| ath | HEN2 | RNA helicase, ATP-dependent, SK12/DOB1 protein | 815269 | IMP | ||
| ath | PFD1 | PREFOLDIN 1 | 815304 | ISS | ||
| ath | OTP51 | endonuclease | 816078 | |||
| ath | PRORP2 | proteinaceous RNase P 2 | 816166 | IMP | ||
| ath | AT2G16940 | Splicing factor, CC1-like protein | 816197 | IEA | ||
| ath | AT2G17580 | Polynucleotide adenylyltransferase family protein | 816265 | |||
| ath | GRP7 | cold, circadian rhythm, and rna binding 2 | 816705 | |||
| ath | SNRNP-G | Putative small nuclear ribonucleoprotein G | 816925 | |||
| ath | AT2G28050 | Pentatricopeptide repeat (PPR) superfamily protein | 817349 | |||
| ath | MAC5B | CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein | 817507 | IEA | ||
| ath | U2B'' | U2 small nuclear ribonucleoprotein B | 817576 | |||
| ath | MAC3B | MOS4-associated complex 3B | 817897 | |||
| ath | AT2G33730 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | 817938 | |||
| ath | AT2G35130 | Tetratricopeptide repeat (TPR)-like superfamily protein | 818079 | |||
| ath | RS2Z33 | arginine/serine-rich zinc knuckle-containing protein 33 | 818311 | |||
| ath | EMB2765 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | 818459 | |||
| ath | SAC3A | SAC3/GANP/Nin1/mts3/eIF-3 p25 family | 818519 | |||
| ath | LIS | WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-like protein | 818748 | |||
| ath | EMB2654 | Tetratricopeptide repeat (TPR)-like superfamily protein | 818771 | |||
| ath | FPA | RNA binding protein | 818942 | |||
| ath | AT2G43770 | Transducin/WD40 repeat-like superfamily protein | 818980 | IEA | ||
| ath | AT2G43960 | SWAP (Suppressor-of-White-APricot)/surp domain-containing protein | 819001 | |||
| ath | AT2G45620 | Nucleotidyltransferase family protein | 819170 | IMP | ||
| ath | U1A | spliceosomal protein U1A | 819371 | |||
| ath | PAC | pale cress protein (PAC) | 819424 | |||
| ath | CLPS3 | CLP-similar protein 3 | 819626 | IMP | ||
| ath | AT3G05760 | C2H2 and C2HC zinc fingers superfamily protein | 819745 | |||
| ath | AT3G66652 | fip1 motif-containing protein | 819846 | IEA | ||
| ath | AT3G06980 | DEA(D/H)-box RNA helicase family protein | 819883 | IEA | ||
| ath | AT3G07860 | Ubiquitin-like superfamily protein | 819977 | |||
| ath | AT3G09100 | mRNA capping enzyme family protein | 820064 | |||
| ath | HCF152 | Tetratricopeptide repeat (TPR)-like superfamily protein | 820122 | IMP | ||
| ath | U11/U12-31K | RNA recognition motif and CCHC-type zinc finger domains containing protein | 820203 | |||
| ath | AT3G12640 | RNA binding (RRM/RBD/RNP motifs) family protein | 820444 | IEA | ||
| ath | SCL30A | SC35-like splicing factor 30A | 820559 | |||
| ath | LSM1B | Small nuclear ribonucleoprotein family protein | 820624 | IGI | ||
| ath | HCF107 | high chlorophyll fluorescent 107 | 820961 | IEA,IMP | ||
| ath | UNE6 | LUC7 related protein | 821276 | |||
| ath | PRP40B | pre-mRNA-processing protein 40B | 821504 | |||
| ath | EIF4A-III | eukaryotic initiation factor 4A-III | 821513 | IPI | ||
| ath | PDF2 | prefoldin 2 | 821819 | IMP | ||
| ath | AT3G24730 | mRNA splicing factor, thioredoxin-like U5 snRNP | 822071 | |||
| ath | AT3G25840 | Protein kinase superfamily protein | 822178 | |||
| ath | AT3G26020 | Protein phosphatase 2A regulatory B subunit family protein | 822199 | |||
| ath | AT3G27550 | RNA-binding CRS1 / YhbY (CRM) domain protein | 822377 | |||
| ath | AT3G27600 | SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein | 822382 | |||
| ath | CRR2 | Tetratricopeptide repeat (TPR)-like superfamily protein | 823832 | |||
| ath | AT3G48120 | serine/arginine-rich splicing factor | 823967 | |||
| ath | AT3G49130 | SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein | 824074 | |||
| ath | U1-70K | U1 small nuclear ribonucleoprotein-70K | 824230 | |||
| ath | RS2Z32 | RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein | 824518 | |||
| ath | SUA | suppressor of abi3-5 | 824590 | IMP | ||
| ath | SCL30 | SC35-like splicing factor 30 | 824712 | |||
| ath | AT3G56790 | RNA splicing factor-like protein | 824846 | |||
| ath | AT3G58560 | DNAse I-like superfamily protein | 825025 | IGI | ||
| ath | AT3G61360 | Tetratricopeptide repeat (TPR)-like superfamily protein | 825308 | |||
| ath | RS31 | RNA-binding (RRM/RBD/RNP motifs) family protein | 825359 | |||
| ath | AT3G62310 | RNA helicase family protein | 825404 | IEA | ||
| ath | PCFS4 | PCF11P-similar protein 4 | 825827 | IMP | ||
| ath | MTSSB | mitochondrially targeted single-stranded DNA binding protein | 826707 | |||
| ath | AT4G16200 | SWAP (Suppressor-of-White-APricot)/surp domain-containing protein | 827313 | |||
| ath | smB | small nuclear ribonucleoprotein associated protein B | 827792 | |||
| ath | EMB2770 | pre-mRNA splicing factor-like protein | 827925 | |||
| ath | PRORP3 | proteinaceous RNase P 3 | 828279 | IMP,IMP | ||
| ath | AT4G22350 | Ubiquitin C-terminal hydrolases superfamily protein | 828330 | |||
| ath | AT4G22410 | U4/U6.U5 tri-snRNP-associated-like protein | 828336 | |||
| ath | SIC | hydroxyproline-rich glycoprotein family protein | 828552 | |||
| ath | FC2 | LAMMER-type protein kinase AFC2 | 828576 | IDA | ||
| ath | RS40 | arginine/serine-rich splicing factor 35 | 828654 | |||
| ath | AT4G25550 | Cleavage/polyadenylation specificity factor, 25kDa subunit | 828660 | |||
| ath | PIRL8 | plant intracellular ras group-related LRR 8 | 828711 | |||
| ath | AT4G28010 | Tetratricopeptide repeat (TPR)-like superfamily protein | 828915 | |||
| ath | CFIM-25 | homolog of CFIM-25 | 829104 | |||
| ath | RUXF | small nuclear ribonucleoprotein F | 829145 | |||
| ath | RSZ22 | serine/arginine-rich 22 | 829285 | |||
| ath | AT4G32270 | Ubiquitin-like superfamily protein | 829360 | |||
| ath | ATU2AF65A | U2 snRNP auxilliary factor, large subunit, splicing factor | 829822 | |||
| ath | BGAL14 | beta-galactosidase 14 | 830016 | |||
| ath | CCR1 | cold, circadian rhythm, and RNA binding 1 | 830082 | |||
| ath | AT5G04050 | RNA-directed DNA polymerase (reverse transcriptase) | 830284 | IEA | ||
| ath | AT5G06520 | SWAP (Suppressor-of-White-APricot)/surp domain-containing protein | 830540 | |||
| ath | AT5G06890 | Ubiquitin-like superfamily protein | 830579 | |||
| ath | Tudor1 | TUDOR-SN protein 1 | 830626 | IMP | ||
| ath | YLS8 | mRNA splicing factor, thioredoxin-like U5 snRNP | 830725 | |||
| ath | ILP1 | GC-rich sequence DNA-binding factor-like protein | 830755 | |||
| ath | AT5G08720 | polyketide cyclase/dehydrase/lipid transporter | 830772 | |||
| ath | AT5G09210 | GC-rich sequence DNA-binding factor-like protein | 830780 | |||
| ath | AT5G09880 | Splicing factor, CC1-like protein | 830848 | IEA | ||
| ath | AT5G12280 | SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein | 831103 | |||
| ath | EMB3011 | RNA helicase family protein | 831141 | |||
| ath | FY | Transducin/WD40 repeat-like superfamily protein | 831191 | IGI | ||
| ath | ELF9 | RNA binding (RRM/RBD/RNP motifs) family protein | 831486 | |||
| ath | SCL28 | SC35-like splicing factor 28 | 831999 | |||
| ath | AT5G19350 | RNA-binding (RRM/RBD/RNP motifs) family protein | 832055 | |||
| ath | HUA2 | Tudor/PWWP/MBT domain-containing protein | 832379 | IMP | ||
| ath | PFD5 | prefoldin 5 | 832393 | ISS | ||
| ath | CPSF100 | cleavage and polyadenylation specificity factor 100 | 832453 | |||
| osa | LOC4325772 | flowering time control protein FY | 4325772 |
