GO:0010017 red or far-red light signaling pathway
76 ath genes in this database. |
[QuickGO]
term: red or far-red light signaling pathway
goid: GO:0010017
Shaded genes do not have GeneChip data. The output was limited up to 100 for each of species.
Species | Symbol | Supportability of expression data |
Gene coexpression |
Locus page |
Full name* | Entrez Gene ID | Evidence* |
---|---|---|---|---|---|---|---|
ath | PKS1 | ☆ | ![]() |
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phytochrome kinase substrate 1 | 814823 | IMP |
ath | PHYB | ☆ | ![]() |
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phytochrome B | 816394 | |
ath | PIL5 | ![]() |
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phytochrome interacting factor 3-like 5 | 816538 | ||
ath | AFR | ![]() |
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Galactose oxidase/kelch repeat superfamily protein | 816990 | IMP | |
ath | COL3 | ☆☆ | ![]() |
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CONSTANS-like 3 | 817016 | |
ath | ELF3 | ☆☆ | ![]() |
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hydroxyproline-rich glycoprotein family protein | 817134 | |
ath | TED4 | ☆☆ | ![]() |
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Plant heme oxygenase (decyclizing) family protein | 817208 | |
ath | FUS12 | ☆☆☆ | ![]() |
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proteasome family protein | 817241 | |
ath | COP1 | ☆☆☆ | ![]() |
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Transducin/WD40 repeat-like superfamily protein | 817857 | |
ath | SOUL-1 | ☆☆☆ | ![]() |
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SOUL heme-binding family protein | 818374 | IMP |
ath | TOPP4 | ![]() |
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type one serine/threonine protein phosphatase 4 | 818571 | ||
ath | ELF4 | ☆☆☆ | ![]() |
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EARLY FLOWERING-like protein (DUF1313) | 818596 | IMP |
ath | VOZ2 | ☆ | ![]() |
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vascular plant one zinc finger protein 2 | 818841 | |
ath | COR15A | ☆ | ![]() |
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cold-regulated 15a | 818854 | IEP |
ath | PP5.2 | ☆☆ | ![]() |
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protein phosphatase 5.2 | 818881 | IMP |
ath | PIF4 | ☆☆ | ![]() |
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phytochrome interacting factor 4 | 818903 | IMP |
ath | SPA1 | ☆☆☆ | ![]() |
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SPA (suppressor of phyA-105) protein family | 819242 | IMP |
ath | JAR1 | ☆ | ![]() |
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Auxin-responsive GH3 family protein | 819244 | |
ath | DAG2 | ☆ | ![]() |
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Dof-type zinc finger DNA-binding family protein | 819271 | |
ath | PRR9 | ☆☆☆ | ![]() |
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pseudo-response regulator 9 | 819292 | IMP |
ath | PIL1 | ![]() |
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phytochrome interacting factor 3-like 1 | 819311 | IEP,IMP | |
ath | RFI2 | ☆☆ | ![]() |
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RING/U-box superfamily protein | 819383 | |
ath | FUS9 | ☆ | ![]() |
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Ubiquitin-conjugating enzyme family protein | 820557 | |
ath | SPA3 | ☆☆☆ | ![]() |
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SPA1-related 3 | 820767 | |
ath | HYH | ☆☆☆ | ![]() |
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HY5-homolog | 821027 | IBA |
ath | BBX32 | ☆☆ | ![]() |
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B-box 32 | 821667 | IMP |
ath | FHY3 | ☆☆ | ![]() |
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far-red elongated hypocotyls 3 | 821781 | IMP |
ath | MYB21 | ☆ | ![]() |
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myb domain protein 21 | 822401 | |
ath | PIL6 | ☆☆☆ | ![]() |
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phytochrome interacting factor 3-like 6 | 825075 | |
ath | FUS6 | ☆☆ | ![]() |
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COP9 signalosome complex subunit 1 | 825286 | |
ath | PIL2 | ![]() |
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phytochrome interacting factor 3-like 2 | 825382 | IEP | |
ath | DDB1A | ☆☆☆ | ![]() |
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damaged DNA binding protein 1A | 825890 | |
ath | DET1 | ☆ | ![]() |
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light-mediated development protein 1 / deetiolated1 (DET1) | 826609 | |
ath | SPA2 | ☆☆☆ | ![]() |
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SPA1-related 2 | 826712 | |
ath | COP9 | ☆☆ | ![]() |
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COP9 signalosome, subunit CSN8 | 827049 | |
ath | FAR1 | ☆☆ | ![]() |
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FRS (FAR1 Related Sequences) transcription factor family | 827173 | IMP |
ath | PHYD | ☆ | ![]() |
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phytochrome D | 827319 | IGI |
ath | HB-2 | ☆ | ![]() |
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homeobox protein 2 | 827384 | IEP |
ath | PHYE | ☆ | ![]() |
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phytochrome E | 827538 | |
ath | DDB1B | ☆☆ | ![]() |
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damaged DNA binding protein 1B | 827857 | |
ath | EID1 | ☆ | ![]() |
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F-box family protein | 828008 | |
ath | SHB1 | ![]() |
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EXS (ERD1/XPR1/SYG1) family protein | 828638 | IMP | |
ath | LAF1 | ![]() |
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myb domain protein 18 | 828661 | ||
ath | CSN6B | ☆☆ | ![]() |
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COP9 signalosome subunit 6B | 828749 | |
ath | ROC1 | ☆☆ | ![]() |
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rotamase CYP 1 | 830029 | |
ath | PKS4 | ☆ | ![]() |
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phytochrome kinase substrate 4 | 830297 | IMP |
ath | HY5 | ☆☆☆ | ![]() |
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Basic-leucine zipper (bZIP) transcription factor family protein | 830996 | IBA,IMP |
ath | COP13 | ☆☆☆ | ![]() |
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Proteasome component (PCI) domain protein | 831275 | |
ath | CO | ☆ | ![]() |
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B-box type zinc finger protein with CCT domain-containing protein | 831441 | |
ath | KIN1 | ![]() |
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stress-responsive protein (KIN1) / stress-induced protein (KIN1) | 831453 | IEP | |
ath | PRR7 | ☆☆☆ | ![]() |
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pseudo-response regulator 7 | 831793 | IMP |
ath | PHYC | ☆☆ | ![]() |
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phytochrome C | 833570 | |
ath | COP8 | ☆☆ | ![]() |
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Proteasome component (PCI) domain protein | 834312 | |
ath | PAT1 | ![]() |
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GRAS family transcription factor | 834867 | ||
ath | HRB1 | ☆ | ![]() |
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Drought-responsive family protein | 834983 | |
ath | CSN6A | ☆☆ | ![]() |
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COP9 signalosome subunit 6A | 835727 | |
ath | SRR1 | ![]() |
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sensitivity to red light reduced protein (SRR1) | 836075 | IMP | |
ath | PIF7 | ☆ | ![]() |
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phytochrome-interacting factor7 | 836248 | |
ath | NDPK2 | ☆☆☆ | ![]() |
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nucleoside diphosphate kinase 2 | 836451 | |
ath | PIF3 | ![]() |
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phytochrome interacting factor 3 | 837479 | IMP | |
ath | PHYA | ☆☆ | ![]() |
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phytochrome A | 837483 | |
ath | ARR4 | ☆☆ | ![]() |
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response regulator 4 | 837587 | IMP |
ath | PKS2 | ☆☆ | ![]() |
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phytochrome kinase substrate 2 | 837989 | |
ath | AT1G18810 | ☆ | ![]() |
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phytochrome kinase substrate-like protein | 838463 | |
ath | PAPP2C | ☆☆ | ![]() |
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phytochrome-associated protein phosphatase type 2C | 838835 | |
ath | GI | ☆☆☆ | ![]() |
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gigantea protein (GI) | 838883 | |
ath | CSN5A | ☆☆☆ | ![]() |
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COP9 signalosome 5A | 838899 | |
ath | PFT1 | ☆☆☆ | ![]() |
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phytochrome and flowering time regulatory protein (PFT1) | 839141 | |
ath | FUS5 | ☆☆ | ![]() |
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Proteasome component (PCI) domain protein | 839241 | |
ath | HFR1 | ☆ | ![]() |
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basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 839300 | |
ath | VOZ1 | ![]() |
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vascular plant one zinc finger protein | 839752 | ||
ath | SPA4 | ☆☆☆ | ![]() |
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SPA1-related 4 | 841743 | |
ath | ARR3 | ☆ | ![]() |
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response regulator 3 | 842288 | |
ath | CSN5B | ☆ | ![]() |
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COP9-signalosome 5B | 843463 | |
ath | RAP2.4 | ☆☆ | ![]() |
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related to AP2 4 | 844143 | IGI |
ath | FHY1 | ☆ | ![]() |
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far-red elongated hypocotyl 1 | 5007942 |