GO:0010017 red or far-red light signaling pathway
76 ath genes in this database. |
[QuickGO]
term: red or far-red light signaling pathway
goid: GO:0010017
Shaded genes do not have GeneChip data. The output was limited up to 100 for each of species.
Species | Symbol | Supportability of expression data |
Gene coexpression |
Locus page |
Full name* | Entrez Gene ID | Evidence* |
---|---|---|---|---|---|---|---|
ath | PKS1 | ☆ | phytochrome kinase substrate 1 | 814823 | IMP | ||
ath | PHYB | ☆ | phytochrome B | 816394 | |||
ath | PIL5 | phytochrome interacting factor 3-like 5 | 816538 | ||||
ath | AFR | Galactose oxidase/kelch repeat superfamily protein | 816990 | IMP | |||
ath | COL3 | ☆☆ | CONSTANS-like 3 | 817016 | |||
ath | ELF3 | ☆☆ | hydroxyproline-rich glycoprotein family protein | 817134 | |||
ath | TED4 | ☆☆ | Plant heme oxygenase (decyclizing) family protein | 817208 | |||
ath | FUS12 | ☆☆☆ | proteasome family protein | 817241 | |||
ath | COP1 | ☆☆☆ | Transducin/WD40 repeat-like superfamily protein | 817857 | |||
ath | SOUL-1 | ☆☆☆ | SOUL heme-binding family protein | 818374 | IMP | ||
ath | TOPP4 | type one serine/threonine protein phosphatase 4 | 818571 | ||||
ath | ELF4 | ☆☆☆ | EARLY FLOWERING-like protein (DUF1313) | 818596 | IMP | ||
ath | VOZ2 | ☆ | vascular plant one zinc finger protein 2 | 818841 | |||
ath | COR15A | ☆ | cold-regulated 15a | 818854 | IEP | ||
ath | PP5.2 | ☆☆ | protein phosphatase 5.2 | 818881 | IMP | ||
ath | PIF4 | ☆☆ | phytochrome interacting factor 4 | 818903 | IMP | ||
ath | SPA1 | ☆☆☆ | SPA (suppressor of phyA-105) protein family | 819242 | IMP | ||
ath | JAR1 | ☆ | Auxin-responsive GH3 family protein | 819244 | |||
ath | DAG2 | ☆ | Dof-type zinc finger DNA-binding family protein | 819271 | |||
ath | PRR9 | ☆☆☆ | pseudo-response regulator 9 | 819292 | IMP | ||
ath | PIL1 | phytochrome interacting factor 3-like 1 | 819311 | IEP,IMP | |||
ath | RFI2 | ☆☆ | RING/U-box superfamily protein | 819383 | |||
ath | FUS9 | ☆ | Ubiquitin-conjugating enzyme family protein | 820557 | |||
ath | SPA3 | ☆☆☆ | SPA1-related 3 | 820767 | |||
ath | HYH | ☆☆☆ | HY5-homolog | 821027 | IBA | ||
ath | BBX32 | ☆☆ | B-box 32 | 821667 | IMP | ||
ath | FHY3 | ☆☆ | far-red elongated hypocotyls 3 | 821781 | IMP | ||
ath | MYB21 | ☆ | myb domain protein 21 | 822401 | |||
ath | PIL6 | ☆☆☆ | phytochrome interacting factor 3-like 6 | 825075 | |||
ath | FUS6 | ☆☆ | COP9 signalosome complex subunit 1 | 825286 | |||
ath | PIL2 | phytochrome interacting factor 3-like 2 | 825382 | IEP | |||
ath | DDB1A | ☆☆☆ | damaged DNA binding protein 1A | 825890 | |||
ath | DET1 | ☆ | light-mediated development protein 1 / deetiolated1 (DET1) | 826609 | |||
ath | SPA2 | ☆☆☆ | SPA1-related 2 | 826712 | |||
ath | COP9 | ☆☆ | COP9 signalosome, subunit CSN8 | 827049 | |||
ath | FAR1 | ☆☆ | FRS (FAR1 Related Sequences) transcription factor family | 827173 | IMP | ||
ath | PHYD | ☆ | phytochrome D | 827319 | IGI | ||
ath | HB-2 | ☆ | homeobox protein 2 | 827384 | IEP | ||
ath | PHYE | ☆ | phytochrome E | 827538 | |||
ath | DDB1B | ☆☆ | damaged DNA binding protein 1B | 827857 | |||
ath | EID1 | ☆ | F-box family protein | 828008 | |||
ath | SHB1 | EXS (ERD1/XPR1/SYG1) family protein | 828638 | IMP | |||
ath | LAF1 | myb domain protein 18 | 828661 | ||||
ath | CSN6B | ☆☆ | COP9 signalosome subunit 6B | 828749 | |||
ath | ROC1 | ☆☆ | rotamase CYP 1 | 830029 | |||
ath | PKS4 | ☆ | phytochrome kinase substrate 4 | 830297 | IMP | ||
ath | HY5 | ☆☆☆ | Basic-leucine zipper (bZIP) transcription factor family protein | 830996 | IBA,IMP | ||
ath | COP13 | ☆☆☆ | Proteasome component (PCI) domain protein | 831275 | |||
ath | CO | ☆ | B-box type zinc finger protein with CCT domain-containing protein | 831441 | |||
ath | KIN1 | stress-responsive protein (KIN1) / stress-induced protein (KIN1) | 831453 | IEP | |||
ath | PRR7 | ☆☆☆ | pseudo-response regulator 7 | 831793 | IMP | ||
ath | PHYC | ☆☆ | phytochrome C | 833570 | |||
ath | COP8 | ☆☆ | Proteasome component (PCI) domain protein | 834312 | |||
ath | PAT1 | GRAS family transcription factor | 834867 | ||||
ath | HRB1 | ☆ | Drought-responsive family protein | 834983 | |||
ath | CSN6A | ☆☆ | COP9 signalosome subunit 6A | 835727 | |||
ath | SRR1 | sensitivity to red light reduced protein (SRR1) | 836075 | IMP | |||
ath | PIF7 | ☆ | phytochrome-interacting factor7 | 836248 | |||
ath | NDPK2 | ☆☆☆ | nucleoside diphosphate kinase 2 | 836451 | |||
ath | PIF3 | phytochrome interacting factor 3 | 837479 | IMP | |||
ath | PHYA | ☆☆ | phytochrome A | 837483 | |||
ath | ARR4 | ☆☆ | response regulator 4 | 837587 | IMP | ||
ath | PKS2 | ☆☆ | phytochrome kinase substrate 2 | 837989 | |||
ath | AT1G18810 | ☆ | phytochrome kinase substrate-like protein | 838463 | |||
ath | PAPP2C | ☆☆ | phytochrome-associated protein phosphatase type 2C | 838835 | |||
ath | GI | ☆☆☆ | gigantea protein (GI) | 838883 | |||
ath | CSN5A | ☆☆☆ | COP9 signalosome 5A | 838899 | |||
ath | PFT1 | ☆☆☆ | phytochrome and flowering time regulatory protein (PFT1) | 839141 | |||
ath | FUS5 | ☆☆ | Proteasome component (PCI) domain protein | 839241 | |||
ath | HFR1 | ☆ | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 839300 | |||
ath | VOZ1 | vascular plant one zinc finger protein | 839752 | ||||
ath | SPA4 | ☆☆☆ | SPA1-related 4 | 841743 | |||
ath | ARR3 | ☆ | response regulator 3 | 842288 | |||
ath | CSN5B | ☆ | COP9-signalosome 5B | 843463 | |||
ath | RAP2.4 | ☆☆ | related to AP2 4 | 844143 | IGI | ||
ath | FHY1 | ☆ | far-red elongated hypocotyl 1 | 5007942 |