GO:0016070 RNA metabolic process
| 859 ath genes in this database. |
| 6 osa genes in this database. |
[QuickGO]
term: RNA metabolic process
goid: GO:0016070
Shaded genes do not have GeneChip data. The output was limited up to 100 for each of species.
| Species | Symbol | Gene coexpression |
Locus page |
Full name* | Entrez Gene ID | Evidence* |
|---|---|---|---|---|---|---|
| ath | AT2G01640 | ribosome biogenesis protein | 814693 | |||
| ath | EMB2794 | Tetratricopeptide repeat (TPR)-like superfamily protein | 814746 | |||
| ath | AT2G02570 | nucleic acid binding/RNA binding protein | 814787 | |||
| ath | MEE12 | maternal effect embryo arrest 12 | 814824 | |||
| ath | OTP85 | Pentatricopeptide repeat (PPR) superfamily protein | 814827 | |||
| ath | EMB2816 | Small nuclear ribonucleoprotein family protein | 814913 | |||
| ath | REME1 | Pentatricopeptide repeat (PPR) superfamily protein | 814914 | |||
| ath | RNEE/G | RNAse E/G-like protein | 814965 | |||
| ath | CPZ | Metallo-hydrolase/oxidoreductase superfamily protein | 814995 | |||
| ath | NRPB6B | RNA polymerase Rpb6 | 815006 | |||
| ath | AT2G05230 | DNAJ heat shock N-terminal domain-containing protein | 815071 | |||
| ath | GRF6 | growth-regulating factor 6 | 815176 | |||
| ath | HEN2 | RNA helicase, ATP-dependent, SK12/DOB1 protein | 815269 | TAS | ||
| ath | PFD1 | PREFOLDIN 1 | 815304 | |||
| ath | ABH1 | ARM repeat superfamily protein | 815840 | |||
| ath | SLO2 | Pentatricopeptide repeat (PPR) superfamily protein | 815845 | |||
| ath | NRPE3B | DNA-directed RNA polymerase family protein | 816032 | |||
| ath | NRPB3 | DNA-directed RNA polymerase family protein | 816035 | |||
| ath | OTP51 | endonuclease | 816078 | |||
| ath | DRD1 | SNF2 domain-containing protein / helicase domain-containing protein | 816136 | |||
| ath | PRORP2 | proteinaceous RNase P 2 | 816166 | |||
| ath | AT2G16940 | Splicing factor, CC1-like protein | 816197 | |||
| ath | AT2G17240 | arginine/serine-rich-like splicing factor | 816229 | |||
| ath | EMB2762 | CCAAT-binding factor | 816230 | |||
| ath | IRE1A | Endoribonuclease/protein kinase IRE1-like protein | 816258 | |||
| ath | AT2G17580 | Polynucleotide adenylyltransferase family protein | 816265 | |||
| ath | AT2G17970 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | 816307 | |||
| ath | HBI1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 816346 | |||
| ath | AT2G18410 | elongator complex protein | 816356 | |||
| ath | AT2G18740 | Small nuclear ribonucleoprotein family protein | 816389 | |||
| ath | DWA1 | DWD (DDB1-binding WD40 protein) hypersensitive to ABA 1 | 816462 | |||
| ath | PRMT1A | protein arginine methyltransferase 1A | 816486 | |||
| ath | CAF1 | RNA-binding CRS1 / YhbY (CRM) domain-containing protein | 816521 | |||
| ath | NOP10 | nucleolar RNA-binding Nop10p family protein | 816569 | |||
| ath | MEF21 | mitochondrial editing factor 21 | 816576 | |||
| ath | XCT | XAP5 family protein | 816650 | |||
| ath | GRP7 | cold, circadian rhythm, and rna binding 2 | 816705 | |||
| ath | AT2G22370 | mediator of RNA polymerase II transcription subunit | 816769 | |||
| ath | GRF1 | growth-regulating factor 1 | 816815 | |||
| ath | SNRNP-G | Putative small nuclear ribonucleoprotein G | 816925 | |||
| ath | FZF | Zinc finger protein 622 | 816986 | |||
| ath | RSZ22a | RNA recognition motif and CCHC-type zinc finger domains containing protein | 816995 | |||
| ath | AT2G25640 | SPOC domain / Transcription elongation factor S-II protein | 817105 | |||
| ath | PAPS2 | poly(A) polymerase 2 | 817127 | |||
| ath | AT2G25870 | haloacid dehalogenase-like hydrolase family protein | 817128 | |||
| ath | SMU2 | RED family protein | 817187 | |||
| ath | AGO4 | Argonaute family protein | 817246 | |||
| ath | SE | C2H2 zinc-finger protein SERRATE (SE) | 817252 | |||
| ath | HDT4 | histone deacetylase-related / HD-like protein | 817331 | |||
| ath | AT2G28050 | Pentatricopeptide repeat (PPR) superfamily protein | 817349 | |||
| ath | AT2G28230 | TATA-binding related factor (TRF) of subunit 20 of Mediator complex | 817369 | |||
| ath | DRB2 | dsRNA-binding protein 2 | 817386 | |||
| ath | AT2G28450 | zinc finger (CCCH-type) family protein | 817393 | |||
| ath | AT2G29210 | splicing factor PWI domain-containing protein | 817470 | |||
| ath | RPC14 | RNApolymerase 14 kDa subunit | 817503 | |||
| ath | MAC5B | CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein | 817507 | |||
| ath | AT2G29670 | Tetratricopeptide repeat (TPR)-like superfamily protein | 817517 | |||
| ath | OTP81 | Tetratricopeptide repeat (TPR)-like superfamily protein | 817526 | |||
| ath | U2B'' | U2 small nuclear ribonucleoprotein B | 817576 | |||
| ath | AT2G30350 | Excinuclease ABC, C subunit, N-terminal | 817585 | |||
| ath | LSH3 | LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) | 817672 | |||
| ath | AT2G31580 | tRNAHis guanylyltransferase | 817716 | |||
| ath | RAP | RAP | 817747 | |||
| ath | PRORP1 | proteinaceous RNase P 1 | 817782 | |||
| ath | AT2G32320 | tRNAHis guanylyltransferase | 817793 | |||
| ath | AGO6 | Argonaute family protein | 817856 | |||
| ath | MAC3B | MOS4-associated complex 3B | 817897 | |||
| ath | SWI3B | switch subunit 3 | 817927 | |||
| ath | AT2G33730 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | 817938 | |||
| ath | EMB3113 | Ribosomal protein S5 family protein | 817947 | |||
| ath | AT2G33840 | Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial | 817952 | |||
| ath | AT2G34160 | Alba DNA/RNA-binding protein | 817977 | |||
| ath | PTAC12 | plastid transcriptionally active 12 | 818029 | |||
| ath | AT2G35130 | Tetratricopeptide repeat (TPR)-like superfamily protein | 818079 | |||
| ath | MORF6 | plastid developmental protein DAG | 818091 | |||
| ath | GRF3 | growth-regulating factor 3 | 818213 | |||
| ath | AT2G36480 | pre-mRNA cleavage complex 2 Pcf11-like protein | 818222 | |||
| ath | SIGF | RNApolymerase sigma-subunit F | 818273 | |||
| ath | AT2G37020 | Translin family protein | 818276 | IEA | ||
| ath | RS2Z33 | arginine/serine-rich zinc knuckle-containing protein 33 | 818311 | |||
| ath | TFIIS | transcript elongation factor IIS | 818438 | |||
| ath | EMB2765 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | 818459 | |||
| ath | WTF9 | Ubiquitin carboxyl-terminal hydrolase family protein | 818498 | |||
| ath | SVR1 | pseudouridine synthase family protein | 818500 | |||
| ath | AT2G39260 | regulator of nonsense transcripts UPF2 | 818511 | |||
| ath | SAC3A | SAC3/GANP/Nin1/mts3/eIF-3 p25 family | 818519 | |||
| ath | AT2G39440 | ribonuclease H2 subunit C-like protein | 818529 | |||
| ath | AT2G39670 | Radical SAM superfamily protein | 818550 | |||
| ath | HESO1 | Nucleotidyltransferase family protein | 818559 | |||
| ath | RNS2 | ribonuclease 2 | 818563 | |||
| ath | NRPD1B | nuclear RNA polymerase D1B | 818591 | |||
| ath | AtCaN2 | Ca(2+)-dependent nuclease family protein | 818634 | |||
| ath | AT2G40430 | Nop53 protein | 818636 | |||
| ath | AT2G40570 | initiator tRNA phosphoribosyl transferase family protein | 818652 | |||
| ath | AT2G40650 | PRP38 family protein | 818660 | |||
| ath | RPB5D | RNA polymerase II fifth largest subunit, D | 818732 | |||
| ath | LIS | WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-like protein | 818748 | |||
| ath | AT2G41550 | Rho termination factor | 818753 | |||
| ath | EMB2654 | Tetratricopeptide repeat (TPR)-like superfamily protein | 818771 | |||
| ath | AT2G41750 | DTW domain-containing protein | 818774 | |||
| osa | rpoB | RNA polymerase beta chain | 3131432 | |||
| osa | matK | ORF542; ORF within trnK intron | 3131450 | |||
| osa | LOC4325772 | flowering time control protein FY | 4325772 | |||
| osa | LOC4341140 | probable methionine--tRNA ligase | 4341140 | |||
| osa | LOC4346642 | bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic | 4346642 | |||
| osa | LOC4349339 | protein NRT1/ PTR FAMILY 6.3 | 4349339 |
