GO:0031047 gene silencing by RNA
183 ath genes in this database. |
[QuickGO]
term: gene silencing by RNA
goid: GO:0031047
Shaded genes do not have GeneChip data. The output was limited up to 100 for each of species.
Species | Symbol | Supportability of expression data |
Gene coexpression |
Locus page |
Full name* | Entrez Gene ID | Evidence* |
---|---|---|---|---|---|---|---|
ath | ETL1 | ☆ | SNF2 domain-containing protein / helicase domain-containing protein | 814740 | IEA | ||
ath | ABH1 | ☆☆☆ | ARM repeat superfamily protein | 815840 | |||
ath | DRD1 | ☆☆ | SNF2 domain-containing protein / helicase domain-containing protein | 816136 | |||
ath | TRN1 | ☆☆☆ | transportin 1 | 816198 | |||
ath | DWA1 | ☆ | DWD (DDB1-binding WD40 protein) hypersensitive to ABA 1 | 816462 | IMP | ||
ath | AT2G19910 | RNA-dependent RNA polymerase family protein | 816510 | ||||
ath | AT2G19920 | RNA-dependent RNA polymerase family protein | 816511 | ||||
ath | XCT | ☆☆☆ | XAP5 family protein | 816650 | |||
ath | AT2G22370 | mediator of RNA polymerase II transcription subunit | 816769 | ||||
ath | AGO4 | ☆☆☆ | Argonaute family protein | 817246 | |||
ath | SE | ☆☆☆ | C2H2 zinc-finger protein SERRATE (SE) | 817252 | |||
ath | HDT4 | ☆☆☆ | histone deacetylase-related / HD-like protein | 817331 | |||
ath | AGO5 | Argonaute family protein | 817334 | IEA | |||
ath | CSD2 | ☆☆☆ | copper/zinc superoxide dismutase 2 | 817365 | |||
ath | AT2G28230 | TATA-binding related factor (TRF) of subunit 20 of Mediator complex | 817369 | ||||
ath | DRB2 | ☆☆ | dsRNA-binding protein 2 | 817386 | |||
ath | RDM4 | ☆☆ | RNA-directed DNA methylation 4 | 817578 | IEA | ||
ath | SAD2 | ☆☆☆ | ARM repeat superfamily protein | 817722 | |||
ath | AGO6 | ☆☆ | Argonaute family protein | 817856 | |||
ath | SUVH2 | SU(VAR)3-9 homolog 2 | 817892 | ||||
ath | SUVH5 | ☆ | SU(VAR)3-9 homolog 5 | 818083 | |||
ath | NRPD1B | ☆☆☆ | nuclear RNA polymerase D1B | 818591 | |||
ath | AT2G41840 | ☆☆☆ | Ribosomal protein S5 family protein | 818784 | IEA | ||
ath | FPA | ☆☆☆ | RNA binding protein | 818942 | |||
ath | HST | ☆☆☆ | ARM repeat superfamily protein | 819666 | IEA | ||
ath | AT3G06670 | ☆☆☆ | binding protein | 819852 | |||
ath | AT3G07590 | ☆☆☆ | Small nuclear ribonucleoprotein family protein | 819950 | |||
ath | IBM1 | ☆☆☆ | Transcription factor jumonji (jmjC) domain-containing protein | 819952 | |||
ath | NAC052 | ☆☆ | NAC domain containing protein 52 | 820213 | |||
ath | AT3G11770 | ☆ | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | 820351 | IEA | ||
ath | FDM3 | ☆ | XH/XS domain-containing protein | 820435 | |||
ath | ROS4 | ☆☆ | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein | 820727 | |||
ath | AT3G15140 | ☆☆ | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | 820745 | |||
ath | SDE5 | silencing defective 5 | 820778 | ||||
ath | DCL2 | ☆☆ | dicer-like 2 | 821300 | |||
ath | AT3G20010 | ☆ | SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein | 821539 | |||
ath | DDL | ☆☆☆ | SMAD/FHA domain-containing protein | 821601 | |||
ath | RDM1 | ☆ | RNA-DIRECTED DNA METHYLATION 1 | 821839 | |||
ath | NRPD2A | ☆☆☆ | nuclear RNA polymerase D2A | 821960 | IMP | ||
ath | CHR38 | ☆ | chromatin remodeling 38 | 823287 | IMP | ||
ath | DCL3 | ☆☆☆ | dicer-like 3 | 823508 | |||
ath | SUO | ☆☆☆ | protein SUO | 823960 | |||
ath | IDN2 | ☆☆ | XH/XS domain-containing protein | 824027 | IEA | ||
ath | DMS3 | ☆☆ | defective in meristem silencing 3 | 824086 | IMP | ||
ath | RDR6 | ☆☆ | RNA-dependent RNA polymerase 6 | 824112 | IMP | ||
ath | HWS | Galactose oxidase/kelch repeat superfamily protein | 825332 | ||||
ath | DRB4 | double-stranded-RNA-binding protein 4 | 825455 | ||||
ath | RDR2 | ☆☆ | RNA-dependent RNA polymerase 2 | 826714 | |||
ath | SUVH9 | SU(VAR)3-9 homolog 9 | 826978 | ||||
ath | NRPD4 | ☆ | RNA polymerase II, Rpb4, core protein | 827277 | |||
ath | NRPB9B | ☆☆ | RNA polymerases M/15 Kd subunit | 827321 | |||
ath | FCA | ☆☆☆ | flowering time control protein FCA | 827323 | |||
ath | HEN1 | ☆☆ | double-stranded RNA binding protein-related / DsRBD protein-like protein | 827839 | |||
ath | EMB2770 | ☆☆☆ | pre-mRNA splicing factor-like protein | 827925 | |||
ath | FDM2 | ☆ | XH/XS domain-containing protein | 828016 | |||
ath | AT4G01180 | XH/XS domain-containing protein | 828058 | IEA | |||
ath | AT4G02840 | ☆☆☆ | Small nuclear ribonucleoprotein family protein | 828163 | |||
ath | NRPB2 | ☆☆☆ | DNA-directed RNA polymerase family protein | 828259 | |||
ath | SIC | ☆☆ | hydroxyproline-rich glycoprotein family protein | 828552 | |||
ath | RS40 | ☆☆ | arginine/serine-rich splicing factor 35 | 828654 | |||
ath | FWA | FLOWERING WAGENINGEN | 828658 | IMP | |||
ath | CRH1 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein | 829785 | IEA | |||
ath | CRT1 | ☆☆ | compromized recognition of TCV 1 | 829786 | IEA | ||
ath | AT4G37510 | ☆☆☆ | Ribonuclease III family protein | 829906 | |||
ath | KTF1 | ☆☆☆ | kow domain-containing transcription factor 1 | 830308 | |||
ath | AT5G06450 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | 830533 | IEA | |||
ath | Tudor1 | ☆☆☆ | TUDOR-SN protein 1 | 830626 | IEA | ||
ath | THO1 | ☆☆ | nuclear matrix protein-like protein | 830846 | IMP | ||
ath | EMB3011 | ☆☆☆ | RNA helicase family protein | 831141 | |||
ath | ESP4 | ☆☆☆ | HEAT repeat-containing protein | 831597 | |||
ath | AT5G20170 | ☆ | RNA polymerase II transcription mediator | 832140 | |||
ath | DCL4 | ☆☆☆ | dicer-like 4 | 832154 | |||
ath | AT5G21030 | PAZ domain-containing protein / piwi domain-containing protein | 832227 | IEA | |||
ath | TGH | ☆☆☆ | SWAP (Suppressor-of-White-APricot)/surp domain-containing protein | 832372 | |||
ath | SGS3 | ☆ | XS domain-containing protein / XS zinc finger domain-containing protein-like protein | 832422 | |||
ath | CPSF100 | ☆☆ | cleavage and polyadenylation specificity factor 100 | 832453 | |||
ath | AT5G35910 | ☆☆☆ | Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain-containing protein | 833577 | |||
ath | AGO10 | ☆☆ | Stabilizer of iron transporter SufD / Polynucleotidyl transferase | 834403 | IEA | ||
ath | SUVR2 | ☆☆ | SET-domain containing protein lysine methyltransferase family protein | 834422 | |||
ath | CBP20 | ☆☆ | CAP-binding protein 20 | 834443 | |||
ath | LBA1 | ☆☆☆ | RNA helicase | 834747 | |||
ath | RS41 | ☆☆☆ | RNA-binding (RRM/RBD/RNP motifs) family protein | 835279 | |||
ath | RCF3 | ☆ | RNA-binding KH domain-containing protein | 835386 | |||
ath | TEX1 | ☆☆ | Transducin/WD40 repeat-like superfamily protein | 835712 | IMP | ||
ath | MBD6 | ☆ | methyl-CPG-binding domain 6 | 836057 | IEA | ||
ath | AT5G59390 | XH/XS domain-containing protein | 836058 | IEA | |||
ath | AT5G60980 | ☆ | Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein | 836219 | IEA | ||
ath | Tudor2 | ☆☆☆ | TUDOR-SN protein 2 | 836300 | IEA | ||
ath | SDE3 | ☆ | P-loop containing nucleoside triphosphate hydrolases superfamily protein | 837047 | |||
ath | MOM | ☆☆☆ | ATP-dependent helicase family protein | 837322 | IEA | ||
ath | CSD1 | ☆☆☆ | copper/zinc superoxide dismutase 1 | 837405 | |||
ath | HYL1 | ☆☆ | dsRNA-binding domain-like superfamily protein | 837498 | |||
ath | FDM4 | ☆ | XH/XS domain-containing protein | 837939 | |||
ath | RDR1 | ☆ | RNA-dependent RNA polymerase 1 | 838044 | |||
ath | SHH1 | ☆ | SAWADEE HOMEODOMAIN protein | 838088 | IMP | ||
ath | FDM1 | ☆☆ | XH/XS domain-containing protein | 838161 | |||
ath | CSTF77 | ☆☆ | Tetratricopeptide repeat (TPR)-like superfamily protein | 838354 | IMP | ||
ath | DMS11 | ☆☆ | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein | 838492 | |||
ath | NFD2 | ☆ | Ribonuclease III family protein | 839061 | |||
ath | THO2 | ☆☆☆ | THO2 | 839081 |