GO:0034660 ncRNA metabolic process

308 ath genes in this database.
3 osa genes in this database.

[QuickGO]

term: ncRNA metabolic process
goid: GO:0034660

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Shaded genes do not have GeneChip data. The output was limited up to 10000.
Species Symbol Gene
coexpression		 Locus
page 		Full name* Entrez Gene ID Evidence*
ath AT2G01640 ribosome biogenesis protein 814693
ath RNEE/G RNAse E/G-like protein 814965
ath CPZ Metallo-hydrolase/oxidoreductase superfamily protein 814995
ath ABH1 ARM repeat superfamily protein 815840
ath OTP51 endonuclease 816078
ath DRD1 SNF2 domain-containing protein / helicase domain-containing protein 816136
ath PRORP2 proteinaceous RNase P 2 816166
ath AT2G17240 arginine/serine-rich-like splicing factor 816229
ath EMB2762 CCAAT-binding factor 816230
ath AT2G18410 elongator complex protein 816356
ath DWA1 DWD (DDB1-binding WD40 protein) hypersensitive to ABA 1 816462
ath PRMT1A protein arginine methyltransferase 1A 816486
ath XCT XAP5 family protein 816650
ath AT2G22370 mediator of RNA polymerase II transcription subunit 816769
ath FZF Zinc finger protein 622 816986
ath AT2G25870 haloacid dehalogenase-like hydrolase family protein 817128
ath AGO4 Argonaute family protein 817246
ath SE C2H2 zinc-finger protein SERRATE (SE) 817252
ath HDT4 histone deacetylase-related / HD-like protein 817331
ath AT2G28230 TATA-binding related factor (TRF) of subunit 20 of Mediator complex 817369
ath DRB2 dsRNA-binding protein 2 817386
ath RPC14 RNApolymerase 14 kDa subunit 817503
ath AT2G30350 Excinuclease ABC, C subunit, N-terminal 817585
ath AT2G31580 tRNAHis guanylyltransferase 817716
ath RAP RAP 817747
ath PRORP1 proteinaceous RNase P 1 817782
ath AT2G32320 tRNAHis guanylyltransferase 817793
ath AGO6 Argonaute family protein 817856
ath EMB3113 Ribosomal protein S5 family protein 817947
ath AT2G33840 Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial 817952
ath AT2G34160 Alba DNA/RNA-binding protein 817977
ath SVR1 pseudouridine synthase family protein 818500
ath AT2G39670 Radical SAM superfamily protein 818550
ath HESO1 Nucleotidyltransferase family protein 818559
ath RNS2 ribonuclease 2 818563
ath NRPD1B nuclear RNA polymerase D1B 818591
ath AT2G40430 Nop53 protein 818636
ath AT2G40570 initiator tRNA phosphoribosyl transferase family protein 818652
ath AT2G41750 DTW domain-containing protein 818774
ath POP4 ribonuclease P family protein 818920
ath EMB2777 Sas10/U3 ribonucleoprotein (Utp) family protein 818967
ath AT2G44120 Ribosomal protein L30/L7 family protein 819018
ath AT2G45620 Nucleotidyltransferase family protein 819170
ath AT2G45730 eukaryotic initiation factor 3 gamma subunit family protein 819181
ath POP1 ribonuclease Ps 819343
ath SWA1 transducin family protein / WD-40 repeat family protein 819411
ath AT2G48100 Exonuclease family protein 819422
ath AT3G04600 Nucleotidylyl transferase superfamily protein 819617
ath AT3G05300 Cytidine/deoxycytidylate deaminase family protein 819694
ath AT3G66652 fip1 motif-containing protein 819846 IEA
ath AT3G06670 binding protein 819852
ath AT3G07170 Sterile alpha motif (SAM) domain-containing protein 819904
ath NS2 asparaginyl-tRNA synthetase 2 819930
ath AT3G07530 integrator complex subunit 819942
ath SIEL ARM repeat superfamily protein 820027
ath NAC052 NAC domain containing protein 52 820213
ath MEE34 Mov34/MPN/PAD-1 family protein 820298
ath AT3G11964 RIBOSOMAL RNA PROCESSING 5 820370
ath AT3G02320 N2,N2-dimethylguanosine tRNA methyltransferase 820451
ath AT3G13740 Ribonuclease III family protein 820583
ath AT3G15080 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 820738
ath SDE5 silencing defective 5 820778
ath AT3G15460 Ribosomal RNA processing Brix domain protein 820785
ath TRZ4 tRNAse Z4 820872
ath AT3G16565 threonyl and alanyl tRNA synthetase second additional domain-containing protein 820906
ath RFC3 Translation elongation factor EF1B/ribosomal protein S6 family protein 820974
ath DRH1 DEAD box RNA helicase 1 821116
ath DCL2 dicer-like 2 821300
ath AT3G19810 BTB/POZ domain protein, putative (DUF177) 821518
ath DDL SMAD/FHA domain-containing protein 821601
ath RDM1 RNA-DIRECTED DNA METHYLATION 1 821839
ath AT3G23700 Nucleic acid-binding proteins superfamily 821951
ath NRPD2A nuclear RNA polymerase D2A 821960
ath AT3G24506 uncharacterized protein 822043
ath TRM11 tRNA modification 11 protein 822245
ath AT3G27970 Exonuclease family protein 822421
ath AT3G28460 methyltransferase 822476
ath DCL3 dicer-like 3 823508
ath HRS1 Histidyl-tRNA synthetase 1 823753
ath SUO protein SUO 823960
ath EDD1 glycine-tRNA ligase 823966
ath RDR6 RNA-dependent RNA polymerase 6 824112
ath SDN1 small RNA degrading nuclease 1 824172
ath CP33 chloroplast RNA-binding protein 33 824403
ath AT3G56120 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 824778
ath AT3G56330 N2,N2-dimethylguanosine tRNA methyltransferase 824800
ath BPG2 P-loop containing nucleoside triphosphate hydrolases superfamily protein 824885
ath DRB4 double-stranded-RNA-binding protein 4 825455
ath CSP41A chloroplast stem-loop binding protein of 41 kDa 825489
ath AT3G63510 FMN-linked oxidoreductases superfamily protein 825526
ath AT4G04670 Met-10+ like family protein / kelch repeat-containing protein 825800
ath AT4G04940 transducin family protein / WD-40 repeat family protein 825833
ath AT4G07950 DNA-directed RNA polymerase, subunit M, archaeal 826299
ath RH39 RH39 826559
ath ELP6 elongator protein 6 826600
ath RDR2 RNA-dependent RNA polymerase 2 826714
ath CFM3B CRM family member 3B 827098
ath NRPD4 RNA polymerase II, Rpb4, core protein 827277
ath NS1 Class II aminoacyl-tRNA and biotin synthetases superfamily protein 827443
ath AT4G17610 tRNA/rRNA methyltransferase (SpoU) family protein 827480
ath AT4G17720 RNA-binding (RRM/RBD/RNP motifs) family protein 827493
ath AT4G18900 Transducin/WD40 repeat-like superfamily protein 827624
ath AT4G18905 Transducin/WD40 repeat-like superfamily protein 827625
ath AT4G18930 RNA ligase/cyclic nucleotide phosphodiesterase family protein 827628
ath EMB1895 ARM repeat superfamily protein 827751
ath HEN1 double-stranded RNA binding protein-related / DsRBD protein-like protein 827839
ath EMB2271 Transducin/WD40 repeat-like superfamily protein 827861
ath AT4G02400 U3 ribonucleoprotein (Utp) family protein 828039
ath BSM Mitochondrial transcription termination factor family protein 828116
ath NRPB2 DNA-directed RNA polymerase family protein 828259
ath PRORP3 proteinaceous RNase P 3 828279
ath SIC hydroxyproline-rich glycoprotein family protein 828552
ath RS40 arginine/serine-rich splicing factor 35 828654
ath AT4G25550 Cleavage/polyadenylation specificity factor, 25kDa subunit 828660
ath FIB2 fibrillarin 2 828668
ath PRMT11 arginine methyltransferase 11 829072
ath La1 La protein 1 829408
ath AT4G35370 Transducin/WD40 repeat-like superfamily protein 829690
ath NRPB1 RNA polymerase II large subunit 829734
ath AT4G35910 Adenine nucleotide alpha hydrolases-like superfamily protein 829746
ath pde191 Mitochondrial transcription termination factor family protein 829972
ath AT5G01230 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 830268
ath KTF1 kow domain-containing transcription factor 1 830308
ath AT5G08180 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 830714
ath AT5G08600 U3 ribonucleoprotein (Utp) family protein 830761
ath THO1 nuclear matrix protein-like protein 830846
ath EMB2730 Ribonuclease II/R family protein 830864
ath AT5G10620 methyltransferase 830927
ath AT5G10880 tRNA synthetase-related / tRNA ligase-like protein 830955
ath AT5G11010 Pre-mRNA cleavage complex II protein family 830968
ath AT5G11240 transducin family protein / WD-40 repeat family protein 830994
ath AT5G12220 las1-like family protein 831096
ath EMB3011 RNA helicase family protein 831141
ath SVR3 elongation factor family protein 831209
ath ABO1 IKI3 family protein 831213
ath AT5G15390 tRNA/rRNA methyltransferase (SpoU) family protein 831391
ath AT5G15550 Transducin/WD40 repeat-like superfamily protein 831408
ath AT5G15810 tRNA (guanine(26)-N(2))-dimethyltransferase 831438
ath EMB269 GTP1/OBG family protein 831975
ath AT5G20170 RNA polymerase II transcription mediator 832140
ath DCL4 dicer-like 4 832154
ath TGH SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 832372
ath SGS3 XS domain-containing protein / XS zinc finger domain-containing protein-like protein 832422
ath EMB2820 Cytidine/deoxycytidylate deaminase family protein 832539
ath AT5G24840 tRNA (guanine-N-7) methyltransferase 832553
ath AT5G28050 Cytidine/deoxycytidylate deaminase family protein 832875
ath AT5G35910 Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain-containing protein 833577
ath AT5G36980 U3 small nucleolar RNA-associated protein 833668
ath AT5G38720 ribosomal RNA-processing 7 protein 833863
ath AT5G40310 Exonuclease family protein 834029
ath AT5G41190 RNA-binding NOB1-like protein 834121
ath XRN2 exoribonuclease 2 834261
ath THO5 THO complex, subunit 5 834304
ath AGO10 Stabilizer of iron transporter SufD / Polynucleotidyl transferase 834403
ath CBP20 CAP-binding protein 20 834443
ath AT5G46580 pentatricopeptide (PPR) repeat-containing protein 834701
ath TRM10 tRNA (guanine(9)-N1)-methyltransferase-like protein 834819
ath AT5G48240 Rrp15p protein 834877
ath OVA2 tRNA synthetase class I (I, L, M and V) family protein 834962
ath AT5G49400 zinc knuckle (CCHC-type) family protein 835000
ath ELO3 radical SAM domain-containing protein / GCN5-related N-acetyltransferase (GNAT) family protein 835098
ath AT5G51170 U6 snRNA phosphodiesterase-like protein 835191
ath RS41 RNA-binding (RRM/RBD/RNP motifs) family protein 835279
ath FIB1 fibrillarin 1 835323
ath RCF3 RNA-binding KH domain-containing protein 835386
ath AT5G53770 Nucleotidyltransferase family protein 835458
ath AT5G54880 DTW domain-containing protein 835579
ath CNX5 co-factor for nitrate, reductase and xanthine dehydrogenase 5 835604
ath TEX1 Transducin/WD40 repeat-like superfamily protein 835712
ath RID2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 835833
ath SEN2 splicing endonuclease 2 836145
ath SAL1 SAL1 phosphatase-like protein 836519
ath ERS glutamate tRNA synthetase 836526
ath DIM1B Ribosomal RNA adenine dimethylase family protein 836768
ath AT5G66470 GTP-binding protein Era-like protein 836779
ath RHON1 Rho termination factor 837128
ath RNL RNAligase 837306
ath AT1G08410 P-loop containing nucleoside triphosphate hydrolases superfamily protein 837361
ath SIG2 RNApolymerase sigma subunit 2 837376
ath CRB chloroplast RNA binding protein 837455
ath HYL1 dsRNA-binding domain-like superfamily protein 837498
ath SRS Seryl-tRNA synthetase 837734
ath AT1G12800 Nucleic acid-binding, OB-fold-like protein 837836
ath DRL1 KTI12-like, chromatin associated protein 837946
ath RDR1 RNA-dependent RNA polymerase 1 838044
ath AT1G15420 WD repeat protein 838113
ath PWP2 periodic tryptophan protein 2 838115
ath RH36 RNA helicase 36 838197
ath NOF1 U3 small nucleolar RNA-associated protein 838345
ath CSTF77 Tetratricopeptide repeat (TPR)-like superfamily protein 838354
ath AT1G18850 uncharacterized protein 838466
ath SWI3C SWITCH/sucrose nonfermenting 3C 838774
ath THO2 THO2 839081
ath OVA9 glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS 839120
ath AT1G01760 denosine deaminases acting on tRNA 839252
ath AT1G01210 DNA-directed RNA polymerase, subunit M, archaeal 839481
ath RRP4 ribosomal RNA processing 4 839521
ath TRM82 Transducin/WD40 repeat-like superfamily protein 839572
ath DCL1 dicer-like 1 839574
ath AT1G04230 rRNA-processing EFG1-like protein (DUF2361) 839575
ath AT1G27160 valyl-tRNA synthetase / valine-tRNA ligase-like protein 839605
ath AT1G28350 Nucleotidylyl transferase superfamily protein 839731
ath SRD2 snRNA activating complex family protein 839756
ath AT1G29250 Alba DNA/RNA-binding protein 839799
ath TRM9 RNA-binding (RRM/RBD/RNP motifs) family protein 840048
ath AT1G31660 bystin-like protein 840053
ath AT1G36310 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 840538
ath AT1G45230 DCL protein (DUF3223) 841096
ath emb2191 Cytidine/deoxycytidylate deaminase family protein 841237
ath NUC-L1 nucleolin like 1 841314
ath CLPR1 CLP protease proteolytic subunit 1 841420
ath AT1G50000 methyltransferase 841424
ath TOR target of rapamycin 841427
ath ZML2 ZIM-LIKE 2 841585
ath TRZ3 tRNAse Z3 841647
ath AT1G52930 Ribosomal RNA processing Brix domain protein 841726
ath XRN4 exoribonuclease 4 841891
ath AT1G55140 Ribonuclease III family protein 841957
ath AT1G56310 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 842084
ath MTR4 RNA helicase, ATP-dependent, SK12/DOB1 protein 842269
ath CPSF73-I cleavage and polyadenylation specificity factor 73-I 842393
ath NRPD1A nuclear RNA polymerase D1A 842605
ath IMP4 Ribosomal RNA processing Brix domain protein 842682
ath AT1G66260 RNA-binding (RRM/RBD/RNP motifs) family protein 842943
ath AT1G68420 Class II aaRS and biotin synthetases superfamily protein 843171
ath TADA tRNA arginine adenosine deaminase 843202
ath AGO7 Argonaute family protein 843276
ath EMB25 DEAD/DEAH box helicase 843343
ath AT1G70200 RNA-binding (RRM/RBD/RNP motifs) family protein 843356
ath CSTF64 cleavage stimulating factor 64 843510
ath BNS bonsai 843651
ath TRZ1 tRNAse Z1 843809
ath XRN3 5'-3' exoribonuclease 3 843900
ath AT1G76170 2-thiocytidine tRNA biosynthesis protein, TtcA 843949
ath La2 RNA recognition motif (RRM)-containing protein 844327
ath AT1G03502 3766647
ath AT1G03506 3766648
ath AT1G03743 3766653
ath AT1G03746 3766654
ath AT1G03935 3766655
ath AT1G07702 3766675
ath SNOR111 3766705
ath AT1G12015 3766706
ath AT1G19373 3766754
ath AT1G19376 3766755
ath AT1G20015 3766761
ath SNOR95 3766797
ath AT1G32385 3766878
ath AT1G74453 3767696
ath AT1G74456 3767697
ath AT1G75163 3767701
ath AT1G75166 3767702
ath AT2G17295 3767923
ath AT2G05765 3768358
ath AT2G35382 3768581
ath AT2G35384 3768582
ath AT2G35387 3768583
ath AT2G35742 3768584
ath AT2G35744 3768585
ath AT2G35747 3768586
ath AT2G20721 3768706
ath AT2G20722 3768707
ath AT2G20723 3768708
ath AT2G43137 3768731
ath AT2G43138 3768732
ath AT2G43139 3768733
ath AT2G43141 3768734
ath AT3G13525 3768827
ath AT3G14475 3768847
ath AT3G01313 3768851
ath AT3G01316 3768852
ath AT3G21805 3768883
ath AT3G24612 3768921
ath AT3G24614 3768922
ath AT3G24615 3768923
ath AT3G27865 3768959
ath AT3G47342 3769676
ath AT3G47347 3769677
ath AT3G47348 3769678
ath AT3G50825 3769700
ath AT3G58193 3769736
ath AT3G58196 3769737
ath U60.2F 3769900
ath AT4G02555 3770154
ath SNOR37-2 3770243
ath AT4G26365 3770269
ath U49.1 3770292
ath AT4G13245 3770540
ath AT4G03295 3770541
ath AT4G39361 3770594
ath AT4G39363 3770595
ath AT4G39364 3770596
ath AT4G39366 3770597
ath AT5G13225 3770670
ath SNOR77 3770695
ath AT5G44286 3771426
ath SNOR30 3771486
ath U60.1F 3771493
ath U3B 3771501
ath U3D 3771503
ath AT5G58595 3771531
ath AT5G66562 3771567
ath AT5G66564 3771568
ath AT5G66567 3771569
ath AT5G10605 methyltransferase 10723039
ath AT2G48121 ribonuclease III family protein 10723072
ath AT1G06233 28716455
ath AT5G38747 uncharacterized protein 28721231


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