KEGG 03018 RNA degradation

136  ppo genes in this database.

List of genes in ppo


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
7453895 C, C LOC7453895 DExH-box ATP-dependent RNA helicase DExH3
7454357 O, N LOC7454357 ABC transporter I family member 19
7454862 O, Y LOC7454862 sm-like protein LSM5
7454889 C, C LOC7454889 30S ribosomal protein 2, chloroplastic
7454929 O, K LOC7454929 ABC transporter I family member 20
7454988 O, N LOC7454988 protein PAT1 homolog
7455670 O, Y LOC7455670 probable CCR4-associated factor 1 homolog 7
7456004 O, Y LOC7456004 exosome complex component RRP42
7456770 O, Y LOC7456770 probable CCR4-associated factor 1 homolog 5
7458031 O, S LOC7458031 putative exosome complex component rrp40
7458412 O, Y LOC7458412 probable CCR4-associated factor 1 homolog 6
7458661 O, N LOC7458661 mRNA-decapping enzyme subunit 2
7458972 M, Y LOC7458972 putative CCR4-associated factor 1 homolog 8
7458986 M, Y LOC7458986 putative CCR4-associated factor 1 homolog 8
7459805 C, C LOC7459805 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial
7460081 O, Y LOC7460081 mRNA-decapping enzyme-like protein
7461333 O, N LOC7461333 probable CCR4-associated factor 1 homolog 11
7461344 C, C LOC7461344 chaperonin 60 subunit beta 2, chloroplastic
7461759 O, M LOC7461759 DEAD-box ATP-dependent RNA helicase 8
7462802 M, P LOC7462802 exosome complex component RRP4 homolog
7462869 O, X LOC7462869 polyadenylate-binding protein 2
7462927 O, Y LOC7462927 exosome complex exonuclease RRP46 homolog
7463897 O, Y LOC7463897 sm-like protein LSM5
7463898 O, Y LOC7463898 sm-like protein LSM8
7464439 M, C LOC7464439 poly(A)-specific ribonuclease PARN-like
7464596 O, N LOC7464596 sm-like protein LSM36B
7464663 O, N LOC7464663 DExH-box ATP-dependent RNA helicase DExH6
7465198 O, Y LOC7465198 ATP-dependent DNA helicase RecQ
7465252 O, N LOC7465252 mRNA-decapping enzyme-like protein
7465293 O, N LOC7465293 uncharacterized LOC7465293
7465425 O, N LOC7465425 nuclear nucleic acid-binding protein C1D
7465489 C, C LOC7465489 carbon catabolite repressor protein 4 homolog 4
7467793 S, X LOC7467793 polyadenylate-binding protein 3
7467821 O, Y LOC7467821 sm-like protein LSM3B
7467989 O, Y_N LOC7467989 exosome complex component RRP45B
7468513 M, Y LOC7468513 CCR4-NOT transcription complex subunit 9
7468590 O, Y LOC7468590 DExH-box ATP-dependent RNA helicase DExH11
7468678 O, Y LOC7468678 probable CCR4-associated factor 1 homolog 7
7469218 O, Y LOC7469218 sm-like protein LSM3B
7469379 C, C LOC7469379 uncharacterized CRM domain-containing protein At3g25440, chloroplastic
7469506 C, P LOC7469506 DExH-box ATP-dependent RNA helicase DExH3
7469680 M, M LOC7469680 heat shock 70 kDa protein, mitochondrial
7469871 O, N LOC7469871 CCR4-NOT transcription complex subunit 3
7469907 O, C LOC7469907 carbon catabolite repressor protein 4 homolog 1
7469944 M, C LOC7469944 DExH-box ATP-dependent RNA helicase DExH1
7469961 O, Y LOC7469961 probable CCR4-associated factor 1 homolog 11
7470588 O, N LOC7470588 polyadenylate-binding protein 6
7470787 M, M LOC7470787 heat shock 70 kDa protein, mitochondrial
7470819 C, C LOC7470819 CCR4-NOT transcription complex subunit 9
7471193 M, M LOC7471193 chaperonin CPN60-2, mitochondrial
7471701 C, C LOC7471701 enhancer of mRNA-decapping protein 4
7471958 O, N LOC7471958 ABC transporter I family member 19
7472468 O, C LOC7472468 sm-like protein LSM36B
7473620 O, Y LOC7473620 exosome complex component RRP43
7474535 O, N LOC7474535 tetratricopeptide repeat protein SKI3
7475679 O, Y LOC7475679 sm-like protein LSM1B
7479509 O, C LOC7479509 carbon catabolite repressor protein 4 homolog 1
7479883 O, N LOC7479883 mRNA-decapping enzyme subunit 2
7480092 O, C LOC7480092 sm-like protein LSM7
7480192 C, Y LOC7480192 ATP-dependent 6-phosphofructokinase 5, chloroplastic
7480371 O, N LOC7480371 protein PAT1 homolog
7480750 O, Y LOC7480750 sm-like protein LSM2
7481528 O, N LOC7481528 uncharacterized LOC7481528
7481831 O, Y LOC7481831 enolase
7481998 O, C LOC7481998 sm-like protein LSM7
7482178 S, Y LOC7482178 enolase
7482225 C, C LOC7482225 chaperonin 60 subunit beta 4, chloroplastic
7482356 O, N LOC7482356 general negative regulator of transcription subunit 3
7482373 O, N LOC7482373 protein RRP6-like 2
7482382 C, C LOC7482382 probable polyribonucleotide nucleotidyltransferase 1, chloroplastic
7482777 M, M LOC7482777 chaperonin CPN60-2, mitochondrial
7483228 C, C LOC7483228 chaperonin 60 subunit beta 2, chloroplastic
7483613 O, C LOC7483613 CCR4-NOT transcription complex subunit 9
7483819 O, P LOC7483819 CCR4-NOT transcription complex subunit 1
7484014 O, Y LOC7484014 exosome complex component RRP43
7484647 O, Y LOC7484647 WD repeat-containing protein VIP3
7485296 C, C LOC7485296 probable CCR4-associated factor 1 homolog 11
7485515 O, Y LOC7485515 DExH-box ATP-dependent RNA helicase DExH10
7486870 M, V LOC7486870 DExH-box ATP-dependent RNA helicase DExH3
7487078 C, M LOC7487078 enolase 1, chloroplastic
7487549 C, C LOC7487549 poly(A)-specific ribonuclease PARN
7487777 O, S LOC7487777 probable U6 snRNA-associated Sm-like protein LSm4
7487862 M, C LOC7487862 polyribonucleotide nucleotidyltransferase 2, mitochondrial
7488143 O, N LOC7488143 uncharacterized LOC7488143
7489156 O, N LOC7489156 nuclear nucleic acid-binding protein C1D
7490046 O, X LOC7490046 polyadenylate-binding protein 8
7491060 O, N LOC7491060 protein RRP6-like 2
7491063 C, C LOC7491063 polyribonucleotide nucleotidyltransferase 1, chloroplastic
7491150 C, C LOC7491150 exosome complex component RRP41-like
7491308 O, S LOC7491308 probable U6 snRNA-associated Sm-like protein LSm4
7492048 O, N LOC7492048 polyadenylate-binding protein 8
7492495 S, N LOC7492495 polyadenylate-binding protein 3
7492754 O, Y LOC7492754 exosome complex component RRP41 homolog
7493220 O, Y LOC7493220 probable CCR4-associated factor 1 homolog 6
7495641 O, N LOC7495641 protein PAT1 homolog 1
7496231 O, Y LOC7496231 exosome complex exonuclease RRP46 homolog
7496951 M, M LOC7496951 DEAD-box ATP-dependent RNA helicase 8
7497342 M, C LOC7497342 poly(A)-specific ribonuclease PARN-like
7497548 O, Y LOC7497548 ABC transporter I family member 20
7497624 C, C LOC7497624 ATP-dependent 6-phosphofructokinase 3
18094381 O, Y LOC18094381 probable CCR4-associated factor 1 homolog 10
18094535 O, Y LOC18094535 probable CCR4-associated factor 1 homolog 6
18094708 O, Y LOC18094708 sm-like protein LSM1B
18095311 C, N LOC18095311 probable NOT transcription complex subunit VIP2
18095590 C, N LOC18095590 non-canonical poly(A) RNA polymerase PAPD7
18096818 S, C LOC18096818 chaperonin CPN60-like 2, mitochondrial
18097075 C, K LOC18097075 ATP-dependent 6-phosphofructokinase 4, chloroplastic
18097124 M, M LOC18097124 chaperonin CPN60-2, mitochondrial
18098097 O, Y LOC18098097 probable CCR4-associated factor 1 homolog 11
18098212 C, C LOC18098212 exosome complex component RRP41-like
18098278 O, Y LOC18098278 sm-like protein LSM2
18098364 O, C LOC18098364 DExH-box ATP-dependent RNA helicase DExH9
18099924 O, N LOC18099924 CCR4-NOT transcription complex subunit 10
18100078 O, Y LOC18100078 enolase 2
18100238 O, N LOC18100238 uncharacterized LOC18100238
18101070 O, M LOC18101070 exosome complex exonuclease RRP44 homolog A
18102017 O, Y LOC18102017 cytosolic enolase 3
18102022 O, Y LOC18102022 exosome complex component RRP45A
18102215 O, Y LOC18102215 probable CCR4-associated factor 1 homolog 9
18103544 C, C LOC18103544 enhancer of mRNA-decapping protein 4
18104099 O, Y LOC18104099 exosome complex component CSL4
18104862 O, X LOC18104862 polyadenylate-binding protein 2
18105172 O, P LOC18105172 CCR4-NOT transcription complex subunit 1
18105991 O, Y LOC18105991 ATP-dependent 6-phosphofructokinase 2
18106064 O, N LOC18106064 protein PAT1 homolog 1
18107269 C, N LOC18107269 probable NOT transcription complex subunit VIP2
18107666 O, K LOC18107666 ATP-dependent 6-phosphofructokinase 3
18107811 O, N LOC18107811 CCR4-NOT transcription complex subunit 10
18107847 O, Y LOC18107847 DExH-box ATP-dependent RNA helicase DExH10
18108956 O, Y LOC18108956 exosome complex component CSL4
18109444 O, N LOC18109444 mRNA-decapping enzyme-like protein
112324893 O, Y LOC112324893 probable CCR4-associated factor 1 homolog 11
112324964 O, Y LOC112324964 probable CCR4-associated factor 1 homolog 11
112324970 O, Y LOC112324970 probable CCR4-associated factor 1 homolog 2
112325313 O, N LOC112325313 protein RRP6-like 2
112326905 S, Y LOC112326905 chaperonin CPN60-like 2, mitochondrial


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