KEGG 00900 Terpenoid backbone biosynthesis
[list]

Species ath(Arabidopsis) gma(Soybean) sly(Tomato) osa(Rice) zma(Maize) bra(Field mustard) vvi(Grape) ppo(Poplar) mtr(Medicago)
UMAP
Representative coexpressed gene network LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00900 Terpenoid backbone biosynthesis 15
ath00072 Synthesis and degradation of ketone bodies 2
ath00280 Valine, leucine and isoleucine degradation 2
ath00650 Butanoate metabolism 2
ath00860 Porphyrin and chlorophyll metabolism 2
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00900 Terpenoid backbone biosynthesis 39
gma00072 Synthesis and degradation of ketone bodies 5
gma00280 Valine, leucine and isoleucine degradation 5
gma00650 Butanoate metabolism 5
gma00071 Fatty acid degradation 4
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00900 Terpenoid backbone biosynthesis 17
sly00072 Synthesis and degradation of ketone bodies 3
sly00280 Valine, leucine and isoleucine degradation 3
sly00650 Butanoate metabolism 3
sly00100 Steroid biosynthesis 3
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00900 Terpenoid backbone biosynthesis 23
osa00860 Porphyrin and chlorophyll metabolism 2
osa00730 Thiamine metabolism 2
osa01212 Fatty acid metabolism 2
osa00072 Synthesis and degradation of ketone bodies 2
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00900 Terpenoid backbone biosynthesis 36
zma00072 Synthesis and degradation of ketone bodies 5
zma00280 Valine, leucine and isoleucine degradation 5
zma00650 Butanoate metabolism 5
zma01212 Fatty acid metabolism 3
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00900 Terpenoid backbone biosynthesis 15
bra00860 Porphyrin and chlorophyll metabolism 4
bra00906 Carotenoid biosynthesis 2
bra01212 Fatty acid metabolism 2
bra00730 Thiamine metabolism 2
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00900 Terpenoid backbone biosynthesis 13
vvi00072 Synthesis and degradation of ketone bodies 2
vvi00280 Valine, leucine and isoleucine degradation 2
vvi00650 Butanoate metabolism 2
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00900 Terpenoid backbone biosynthesis 14
ppo00072 Synthesis and degradation of ketone bodies 2
ppo00280 Valine, leucine and isoleucine degradation 2
ppo00650 Butanoate metabolism 2
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00900 Terpenoid backbone biosynthesis 17
mtr00906 Carotenoid biosynthesis 3
mtr00072 Synthesis and degradation of ketone bodies 3
mtr00280 Valine, leucine and isoleucine degradation 3
mtr00650 Butanoate metabolism 3
Gene list in the network
Symbol Function*
CPT cis-prenyltransferase
ATP3 gamma subunit of Mt ATP synthase
MVD1 mevalonate diphosphate decarboxylase 1
AT3G06460 GNS1/SUR4 membrane protein family
IPP2 isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase 2
HCF107 high chlorophyll fluorescent 107
AT3G49190 O-acyltransferase (WSD1-like) family protein
AT3G54250 GHMP kinase family protein
AT3G56290 potassium transporter
HMGS hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase / 3-hydroxy-3-methylglutaryl coenzyme A synthase
CLA1 Deoxyxylulose-5-phosphate synthase
FPS2 farnesyl diphosphate synthase 2
FLDH NAD(P)-binding Rossmann-fold superfamily protein
GUN5 magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH)
AT5G19850 alpha/beta-Hydrolases superfamily protein
FPS1 farnesyl diphosphate synthase 1
ACAT2 acetoacetyl-CoA thiolase 2
cPT4 Undecaprenyl pyrophosphate synthetase family protein
AT5G58784 Undecaprenyl pyrophosphate synthetase family protein
SPS2 solanesyl diphosphate synthase 2
AT1G74470 Pyridine nucleotide-disulfide oxidoreductase family protein
DWA2 DWD (DDB1-binding WD40 protein) hypersensitive to ABA 2
SPS1 solanesyl diphosphate synthase 1
Symbol Function*
TSB tryptophan synthase beta subunit
GPPS geranyl-diphosphate synthase
DXS1 1-deoxy-D-xylulose 5-phosphate synthase 1
LOC100306378 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic-like
LOC100306609 uncharacterized LOC100306609
ERA1B farnesyltransferase ERA1B
LOC100500596 probable acetyl-CoA acetyltransferase, cytosolic 2
LOC100776777 acetyl-CoA acetyltransferase, cytosolic 1
LOC100779074 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic
LOC100779933 geranylgeranyl diphosphate reductase, chloroplastic
LOC100780213 probable acetyl-CoA acetyltransferase, cytosolic 2
LOC100780374 solanesyl diphosphate synthase 3, chloroplastic/mitochondrial
LOC100780822 serine carboxypeptidase-like 50
LOC100782137 farnesyl pyrophosphate synthase 1-like
LOC100782362 geranylgeranyl pyrophosphate synthase, chloroplastic
LOC100782595 putative hydroxymethylglutaryl-CoA synthase
LOC100783078 isopentenyl-diphosphate Delta-isomerase I
LOC100783538 probable solanesyl-diphosphate synthase 3, chloroplastic
LOC100784845 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic
LOC100785539 geranylgeranyl pyrophosphate synthase, chloroplastic
LOC100786607 probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic
LOC100786956 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1
LOC100788028 hydroxymethylglutaryl-CoA synthase
LOC100789279 probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic
LOC100790033 3-hydroxy-3-methylglutaryl-coenzyme A reductase
DXR1 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic-like
LOC100792725 solanesyl diphosphate synthase 3, chloroplastic/mitochondrial
LOC100797159 uncharacterized LOC100797159
LOC100797826 long chain acyl-CoA synthetase 8
LOC100799658 CAAX prenyl protease 1 homolog
LOC100800990 diphosphomevalonate decarboxylase MVD2, peroxisomal
LOC100801743 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic
LOC100802347 farnesyl pyrophosphate synthase 1
LOC100805842 probable solanesyl-diphosphate synthase 3, chloroplastic
LOC100805941 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic
LOC100808796 D-aminoacyl-tRNA deacylase-like
LOC100808856 squalene monooxygenase
LOC100811237 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1
LOC100812541 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic-like
ERA1A farnesyltransferase
LOC100815480 3-hydroxy-3-methylglutaryl-coenzyme A reductase 3
LOC100818067 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic
LOC100818360 CAAX prenyl protease 1 homolog
LOC100818443 phosphomevalonate kinase, peroxisomal
LOC100819481 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic
LOC100820343 mevalonate kinase-like
Symbol Function*
FPPS1 farnesyl pyrophosphate synthase
ispE 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic
HMGR 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1
HDS 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
LOC100037490 geranylgeranyl pyrophosphate synthetase-like protein
MDC mevalonate disphosphate decarboxylase 2
IDI2 isopentenyl diphosphate isomerase 2
LOC101246135 ATP-citrate synthase alpha chain protein 2
LOC101247218 probable mitochondrial-processing peptidase subunit beta, mitochondrial
LOC101247858 CAAX prenyl protease 1 homolog
HMGS1 hydroxymethylglutaryl-CoA synthase 1
dxs2 1-deoxy-D-xylulose 5-phosphate synthase 2
MPPDC1 mevalonate diphosphate decarboxylase 1
IDI1 isopentenyl diphosphate isomerase
HSD2 3beta-hydroxysteroid-dehydrogenase/decarboxylase
DWF5-2 7-dehydrocholesterol reductase
PMK1 phosphomevalonate kinase 1
ACAT1 acetyl-CoA C-acetyltranferase 1
ACAT3 acetyl-CoA C-acetyltranferase 3
C5-SD delta(7)-sterol-C5(6)-desaturase
LOC101266328 uncharacterized LOC101266328
HMG3 3-hydroxy-3-methylglutaryl-coenzyme A reductase 3
HMGR4 3-hydroxy-3-methylglutaryl-coenzyme A reductase 4
LOC101267503 ATP-citrate synthase beta chain protein 2
Symbol Function*
LOC4323925 protein VTE6, chloroplastic
LOC4324245 farnesyl pyrophosphate synthase
LOC4326153 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic-like
LOC4326901 magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic
LOC4326950 phosphatidylinositol transfer protein 3
LOC4327968 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic-like
LOC4328034 diphosphomevalonate decarboxylase MVD2, peroxisomal
LOC4328624 dehydrodolichyl diphosphate synthase complex subunit NUS1
LOC4329751 protein ACTIVITY OF BC1 COMPLEX KINASE 8, chloroplastic
LOC4329911 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic-like
LOC4330320 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic-like
LOC4330711 geranylgeranyl diphosphate reductase, chloroplastic-like
LOC4331944 dehydrodolichyl diphosphate synthase complex subunit NUS1
LOC4333858 uncharacterized LOC4333858
LOC4334003 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic-like
LOC4338768 1-deoxy-D-xylulose-5-phosphate synthase 1, chloroplastic-like
LOC4338791 isopentenyl-diphosphate Delta-isomerase I
LOC4339489 farnesyl pyrophosphate synthase
LOC4339755 mitochondrial adenine nucleotide transporter ADNT1
LOC4340251 dehydrodolichyl diphosphate synthase 6
LOC4342614 probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic
LOC4343523 isopentenyl-diphosphate Delta-isomerase I
LOC4343721 geranylgeranyl pyrophosphate synthase 7, chloroplastic
LOC4343863 dehydrodolichyl diphosphate synthase 6
LOC4345286 enoyl-[acyl-carrier-protein] reductase [NADH] 1, chloroplastic-like
LOC4346520 acetyl-CoA acetyltransferase, cytosolic 1
LOC4347614 hydroxymethylglutaryl-CoA synthase
LOC4351957 probable solanesyl-diphosphate synthase 3, chloroplastic
LOC9266653 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic-like
LOC9272514 solanesyl-diphosphate synthase 1, mitochondrial-like
Symbol Function*
LOC541901 uncharacterized LOC541901
LOC541903 farnesyl pyrophosphate synthase 1
LOC542023 dxr protein
LOC542690 uncharacterized LOC542690
LOC606484 deoxy xylulose synthase 1
LOC100191922 3-hydroxy-3-methylglutaryl-coenzyme A reductase 2
LOC100192004 uncharacterized LOC100192004
LOC100193519 Enoyl-[acyl-carrier-protein] reductase [NADH] chloroplastic
LOC100272499 uncharacterized LOC100272499
LOC100272824 Hydroxymethylglutaryl-CoA synthase
LOC100273044 uncharacterized LOC100273044
LOC100273420 farnesyl diphosphate synthase3
LOC100274033 ent-kaurene synthase B
LOC100274191 uncharacterized LOC100274191
LOC100275213 uncharacterized LOC100275213
LOC100276918 methyl erythritol cyclodiphosphate synthase2
LOC100279817 uncharacterized LOC100279817
LOC100282190 uncharacterized LOC100282190
LOC100282721 prenyl transferase
LOC100282760 uncharacterized LOC100282760
LOC100282878 Diphosphomevalonate decarboxylase MVD2
LOC100282968 phosphomevalonate kinase
LOC100283007 geranylgeranyl hydrogenase1
LOC100284320 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
LOC100284608 calcium sensing receptor
LOC100285783 hydroxymethylglutaryl-CoA synthase
lw1 lemon white1
LOC100383280 uncharacterized LOC100383280
LOC100384001 uncharacterized LOC100384001
LOC100384063 Mevalonate kinase
LOC100384769 putative hydroxymethylglutaryl-CoA synthase family protein
LOC100502421 uncharacterized LOC100502421
LOC100502542 putative geranylgeranyl pyrophosphate synthase 4
LOC101060998 phosphomevalonate kinase
LOC101202696 acetyl-CoA acetyltransferase, cytosolic 1
LOC103627645 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1
LOC103630362 isopentenyl-diphosphate Delta-isomerase I
LOC103636414 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic
LOC103643980 diphosphomevalonate decarboxylase MVD2, peroxisomal
LOC103644955 3-hydroxy-3-methylglutaryl-coenzyme A reductase-like
LOC103647599 hydroxymethylglutaryl-CoA synthase
LOC103653626 phosphoinositide phosphatase SAC7
LOC103653897 heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic
LOC103654554 long chain acyl-CoA synthetase 9, chloroplastic
Symbol Function*
LOC103830076 magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic
LOC103831923 geranylgeranyl diphosphate reductase, chloroplastic
LOC103832329 solanesyl diphosphate synthase 1
LOC103834423 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic
LOC103835193 15-cis-phytoene desaturase, chloroplastic/chromoplastic
LOC103837242 acetyl-CoA acetyltransferase, cytosolic 1-like
LOC103838115 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic-like
LOC103838937 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic
LOC103841340 diphosphomevalonate decarboxylase MVD2
LOC103841596 magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic
LOC103844580 uncharacterized LOC103844580
LOC103845475 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic
LOC103846871 uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic-like
LOC103849152 zeta-carotene desaturase, chloroplastic/chromoplastic
LOC103850337 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ
LOC103851624 dehydrodolichyl diphosphate synthase 2-like
LOC103852907 geranylgeranyl diphosphate reductase, chloroplastic
LOC103860788 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic
LOC103865611 geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic
LOC103867923 ATP-dependent zinc metalloprotease FTSH 2, chloroplastic
LOC103870527 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic-like
LOC103870868 acyl carrier protein SF2, chloroplastic
LOC103872491 solanesyl diphosphate synthase 2, chloroplastic
LOC103874719 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic
Symbol Function*
LOC100232946 solanesyl diphosphate synthase 3, chloroplastic/mitochondrial
LOC100244379 hydroxymethylglutaryl-CoA synthase
LOC100244987 dehydrodolichyl diphosphate synthase 2
LOC100245637 protein-S-isoprenylcysteine O-methyltransferase B
LOC100246988 solanesyl diphosphate synthase 1
LOC100248516 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic
LOC100251686 diphosphomevalonate decarboxylase MVD2
LOC100253429 CAAX prenyl protease 1 homolog
LOC100257071 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic
LOC100258627 uncharacterized LOC100258627
LOC100261596 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic
LOC100267479 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic
LOC100267959 protein-S-isoprenylcysteine O-methyltransferase B
LOC104882418 hydroxymethylglutaryl-CoA synthase
Symbol Function*
LOC7454465 uncharacterized LOC7454465
LOC7456102 phosphomevalonate kinase, peroxisomal
LOC7456294 protein-S-isoprenylcysteine O-methyltransferase A
LOC7456396 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic
LOC7458198 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic
LOC7469058 ATP-citrate synthase alpha chain protein 2
LOC7469336 acetyl-CoA acetyltransferase, cytosolic 1
LOC7472744 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic
LOC7472988 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic
LOC7473298 mevalonate kinase
LOC7479248 hydroxymethylglutaryl-CoA synthase
LOC7487248 CAAX prenyl protease 2
LOC7489339 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic
LOC7490682 glucose-induced degradation protein 8 homolog
LOC7490899 diphosphomevalonate decarboxylase MVD2, peroxisomal
LOC7491765 protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
LOC7497218 CAAX prenyl protease 1 homolog
Symbol Function*
LOC11407094 geranylgeranyl pyrophosphate synthase 7, chloroplastic
LOC11409457 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1
LOC11409691 protein LUTEIN DEFICIENT 5, chloroplastic
LOC11410760 farnesyl pyrophosphate synthase 1
LOC11413255 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic
LOC11413900 ATP-citrate synthase beta chain protein 1
LOC11415648 zeta-carotene desaturase, chloroplastic/chromoplastic
LOC11415814 isopentenyl-diphosphate Delta-isomerase I
LOC11416526 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1
LOC11423180 protein NRT1/ PTR FAMILY 1.2
LOC11424070 acetyl-CoA acetyltransferase, cytosolic 1
LOC11425190 phosphomevalonate kinase, peroxisomal
LOC11425415 ATP-citrate synthase alpha chain protein 2
LOC11427648 uncharacterized LOC11427648
LOC11429131 hydroxymethylglutaryl-CoA synthase
LOC11429779 mevalonate kinase
LOC11432737 phytoene dehydrogenase, chloroplastic/chromoplastic
LOC11432969 phospholipase A(1) LCAT3
LOC11433082 embryo-specific protein ATS3A
LOC11434381 beta-amyrin synthase
LOC11438073 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic
LOC11443066 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic
LOC25481093 acetyl-CoA acetyltransferase, cytosolic 1
LOC25485588 diphosphomevalonate decarboxylase MVD2, peroxisomal
LOC25490472 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic
LOC25490962 probable phytol kinase 3, chloroplastic
LOC25492334 putative phospholipid:diacylglycerol acyltransferase 2
LOC25492711 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic
LOC25499972 protein STRICTOSIDINE SYNTHASE-LIKE 10
LOC25501402 probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic


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