Coexpression PCA detail

mtr 

Platform: mtr-r.c4-0

PC1	PC2	PC3	PC4	PC5	PC6	PC7	PC8	PC9	PC10
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Loading 1 SRP229031 ACHILLEUS-RNASEQ loading run annotation attributes 0.9345 SRR10416758 MEDTR-7dpi-ROOT-M2-B Title MEDTR-7dpi-ROOT-M2 0.8913 SRR10416757 MEDTR-7dpi-ROOT-M2-A Title MEDTR-7dpi-ROOT-M2 0.8774 SRR10416734 MEDTR-7dpi-ROOT-M4-B Title MEDTR-7dpi-ROOT-M4 -0.8391 SRR10416781 MEDTR-1dpi-NOD-Rs-M3-A Title MEDTR-1dpi-NOD-Rs-M3 -0.8488 SRR10416729 MEDTR-2dpi-NOD-M2-A Title MEDTR-2dpi-NOD-M2 -0.8678 SRR10416755 MEDTR-1dpi-NOD-M3-A Title MEDTR-1dpi-NOD-M3 2 SRP220100 The U-box family genes in Medicago truncatula: key elements in response to salt, cold, and drought stresses loading run annotation attributes 0.8827 SRR10058816 stress Cold | time 6h 0.7822 SRR10058823 stress Salt | time 2h 0.7232 SRR10058824 stress Salt | time 6h -0.3999 SRR10058825 stress Salt | time 12h -0.4722 SRR10058815 stress Cold | time 2h -0.621 SRR10058820 stress Drought | time 6h 3 SRP349933 MT-DCRISPR2021-NODULES loading run annotation attributes 0.88 SRR17176364 efd_4DPI_CRISPR_EFD2_3-B Title efd_4DPI_CRISPR_EFD2_3 | Other_organism Sinorhizobium meliloti 2011 taxid=1286640 0.8602 SRR17176363 efd_4DPI_CRISPR_EFD2_3-A Title efd_4DPI_CRISPR_EFD2_3 | Other_organism Sinorhizobium meliloti 2011 taxid=1286640 0.8312 SRR17176370 A17_4DPI_CRISPR_EFD2_2-B Title A17_4DPI_CRISPR_EFD2_2 | Other_organism Sinorhizobium meliloti 2011 taxid=1286640 -0.8004 SRR17176341 A17_NOD_CRISPR_DRM_3-A Title A17_NOD_CRISPR_DRM_3 | Other_organism Sinorhizobium meliloti -0.8431 SRR17176340 A17_NOD_CRISPR_GUS_2-B Title A17_NOD_CRISPR_GUS_2 | Other_organism Sinorhizobium meliloti -0.856 SRR17176339 A17_NOD_CRISPR_GUS_2-A Title A17_NOD_CRISPR_GUS_2 | Other_organism Sinorhizobium meliloti 4 SRP077692 Medicago truncatula Transcriptome or Gene expression loading run annotation attributes 0.8307 SRR3735577 ecotype HM034 | tissue root | treatment Uninoculated 0.8259 SRR3735578 ecotype HM034 | tissue root | treatment Uninoculated 0.771 SRR3735579 ecotype HM034 | tissue root | treatment Uninoculated -0.6671 SRR3735573 ecotype HM101 | tissue nodule | treatment Inoculated by Sinorhizobium medicae (WSM419) -0.6898 SRR3735546 ecotype HM101 | tissue nodule | treatment Inoculated by Sinorhizobium meliloti (KH46c) -0.784 SRR3735580 ecotype HM101 | tissue nodule | treatment Inoculated by Sinorhizobium medicae (WSM419) 5 SRP349926 MT-EFFOR2019 loading run annotation attributes 0.8221 SRR17176041 MEDTR-PA-AT1 Title MEDTR-PA-AT | Molecule polyA_RNA | Extract_protocol qiagen PolyA 0.807 SRR17176042 MEDTR-PA-AT2 Title MEDTR-PA-AT | Molecule polyA_RNA | Extract_protocol qiagen PolyA 0.7601 SRR17176044 MEDTR-PA-ET1 Title MEDTR-PA-ET | Molecule polyA_RNA | Extract_protocol qiagen PolyA -0.6544 SRR17176052 MEDTR-PA-ABL_10_2_3 Title MEDTR-PA-ABL_10_2 | Molecule polyA_RNA | Extract_protocol qiagen PolyA | Other_organism Sinorhizobium meliloti BL255C taxid=698936 -0.7156 SRR17176065 MEDTR-RB-eBL_10_2_3-A Title MEDTR-RB-eBL_10_2_3 | Molecule total_RNA | Extract_protocol qiagen ribodepletion | Other_organism Sinorhizobium meliloti BL255C taxid=698936 -0.745 SRR17176066 MEDTR-RB-eBL_10_2_3-B Title MEDTR-RB-eBL_10_2_3 | Molecule total_RNA | Extract_protocol qiagen ribodepletion | Other_organism Sinorhizobium meliloti BL255C taxid=698936 6 SRP043103 Medicago truncatula Transcriptome or Gene expression loading run annotation attributes 0.8201 SRR1377058 Mt_NSP1_MYCNS_10-6M_2H+4H_R1 genotype nsp1-1 | treatment non sulphated Myc LCO at 10-6M 0.8058 SRR1377070 Mt_DMI3_ACN_2H+4H_R1 genotype dmi3-1 | treatment acetonitril solvent 0.7139 SRR1377063 Mt_NSP1_ACN_2H+4H_R3 treatment acetonitril solvent | genotype nsp1-1 -0.7147 SRR1377072 Mt_DMI3_ACN_2H+4H_R3 genotype dmi3-1 | treatment acetonitril solvent -1.0651 SRR1377068 Mt_DMI3_MYCNS_10-6M_2H+4H_R2 treatment non sulphated Myc LCO at 10-6M -1.1221 SRR1377066 Mt_DMI3_MYCS_10-6M_2H+4H_R3 treatment sulphated (S) Myc-LCOs at 10-6M 7 SRP323948 Processing of NODULE INCEPTION controls transition to nitrogen fixation in root nodules loading run annotation attributes 0.8061 SRR14804669 source_name regenerated root structure | genoytpe wild type ecotype jemalong A17 cultivar Jester transformed with pLjUBI:NIN | treatment no treatment 0.7125 SRR14804665 source_name regenerated root structure | genoytpe wild type ecotype jemalong A17 cultivar Jester transformed with pLjUBI:NIN | treatment no treatment 0.5743 SRR14804671 source_name regenerated root structure | genoytpe wild type ecotype jemalong A17 cultivar Jester transformed with pLjUBI:NIN | treatment no treatment -0.6202 SRR14804673 source_name root nodule | genoytpe wild type ecotype jemalong A17 | treatment Sinorhizobium meliloti -0.6304 SRR14804675 source_name root nodule | genoytpe wild type ecotype jemalong A17 | treatment Sinorhizobium meliloti -0.6653 SRR14804676 source_name root nodule | genoytpe wild type ecotype jemalong A17 | treatment Sinorhizobium meliloti 8 SRP212693 NODULE INCEPTION recruits the lateral root developmental program for symbiotic nodule organogenesis loading run annotation attributes 0.7961 SRR9623293 source_name 2-3mm segment of root | time 24h | tissue 2-3mm segment of root | genotype lbd16_mutant_ecotype_R108 | treatments mock 0.7051 SRR9623308 source_name 2-3mm segment of root | time 24h | tissue 2-3mm segment of root | genotype wild type ecotype R108 | treatments mock 0.6403 SRR9623377 source_name regenerated root structure | tissue regenerated root structure | genotype wild type ecotype jemalong cultivar Jester transformed with pLjUBI:GFP | treatments no treatment -0.6566 SRR9623261 source_name 2-3mm segment of root | time 168h | tissue 2-3mm segment of root | genotype wild type ecotype jemalong cultivar Jester | treatments Sinorhizobium meliloti strain 2011 -0.6946 SRR9623260 source_name 2-3mm segment of root | time 168h | tissue 2-3mm segment of root | genotype wild type ecotype jemalong cultivar Jester | treatments Sinorhizobium meliloti strain 2011 -0.707 SRR9623263 source_name 2-3mm segment of root | time 168h | tissue 2-3mm segment of root | genotype wild type ecotype jemalong cultivar Jester | treatments Sinorhizobium meliloti strain 2011 9 SRP018396 Medicago truncatula strain:Jemalong A17/J5 Transcriptome or Gene expression loading run annotation attributes 0.6803 SRR670353 cultivar Jemalong A17 | genotype nfp (C31) 0.5853 SRR670348 cultivar Jemalong A17 | genotype wt 0.5232 SRR670356 cultivar Jemalong A17 | genotype nfp (C31) -0.4468 SRR670403 cultivar Jemalong J5 | genotype dmi3 (TRV25) -0.4512 SRR670352 cultivar Jemalong A17 | genotype nfp (C31) -0.5121 SRR670349 cultivar Jemalong A17 | genotype wt 10 SRP230996 Effects of arbuscular mycorrhizal fungus Rhizophagus irregularis in Medicago truncatula (wild type and SUNN mutant) loading run annotation attributes 0.6225 SRR10506590 0.5228 SRR10506587 0.4755 SRR10506589 -0.4157 SRR10506579 -0.6295 SRR10506584 -0.6609 SRR10506575	Loading 1 SRP220100 The U-box family genes in Medicago truncatula: key elements in response to salt, cold, and drought stresses loading run annotation attributes 0.9656 SRR10058816 stress Cold | time 6h 0.9437 SRR10058823 stress Salt | time 2h 0.9437 SRR10058824 stress Salt | time 6h -0.4885 SRR10058814 stress Cold | time 0h -0.6976 SRR10058815 stress Cold | time 2h -0.7959 SRR10058820 stress Drought | time 6h 2 SRP043103 Medicago truncatula Transcriptome or Gene expression loading run annotation attributes 0.9266 SRR1377058 Mt_NSP1_MYCNS_10-6M_2H+4H_R1 genotype nsp1-1 | treatment non sulphated Myc LCO at 10-6M 0.7824 SRR1377063 Mt_NSP1_ACN_2H+4H_R3 treatment acetonitril solvent | genotype nsp1-1 0.7743 SRR1377070 Mt_DMI3_ACN_2H+4H_R1 genotype dmi3-1 | treatment acetonitril solvent -0.8157 SRR1377065 Mt_DMI3_MYCS_10-6M_2H+4H_R2 treatment sulphated (S) Myc-LCOs at 10-6M -1.223 SRR1377068 Mt_DMI3_MYCNS_10-6M_2H+4H_R2 treatment non sulphated Myc LCO at 10-6M -1.2885 SRR1377066 Mt_DMI3_MYCS_10-6M_2H+4H_R3 treatment sulphated (S) Myc-LCOs at 10-6M 3 SRP212693 NODULE INCEPTION recruits the lateral root developmental program for symbiotic nodule organogenesis loading run annotation attributes 0.9186 SRR9623304 time 24h | genotype wild type ecotype R108 | treatments Sinorhizobium meliloti strain 2011 0.9153 SRR9623293 time 24h | genotype lbd16_mutant_ecotype_R108 | treatments mock 0.7888 SRR9623303 time 24h | genotype wild type ecotype R108 | treatments Sinorhizobium meliloti strain 2011 -0.9032 SRR9623147 time 2h | genotype wild type ecotype jemalong cultivar Jester | treatments Sinorhizobium meliloti strain 2011 -0.9098 SRR9623167 time 8h | genotype wild type ecotype jemalong cultivar Jester | treatments Sinorhizobium meliloti strain 2011 -0.9453 SRR9623148 time 2h | genotype wild type ecotype jemalong cultivar Jester | treatments Sinorhizobium meliloti strain 2011 4 SRP359760 Medicago truncatula seedling treatment with Pythium oligandrum oospores within in-vitro system. loading run annotation attributes 0.8886 SRR18015492 time point 14 days post treatment | replicate Biological replicate 5 0.8858 SRR18015491 time point 14 days post treatment | replicate Biological replicate 6 0.6206 SRR18015505 time point 7 days post treatment | replicate Biological replicate 4 -0.5971 SRR18015527 time point 3 days post treatment | replicate Biological replicate 6 -0.6483 SRR18015528 time point 3 days post treatment | replicate Biological replicate 5 -0.8082 SRR18015529 time point 3 days post treatment | replicate Biological replicate 4 5 SRP349926 MT-EFFOR2019 loading run annotation attributes 0.7843 SRR17176029 MEDTR-RB-A2011_10_1-A Title MEDTR-RB-A2011_10_1 | Molecule total_RNA | Extract_protocol qiagen ribodepletion | Other_organism Sinorhizobium meliloti 2011 taxid=1286640 0.674 SRR17176030 MEDTR-RB-A2011_10_1-B Title MEDTR-RB-A2011_10_1 | Molecule total_RNA | Extract_protocol qiagen ribodepletion | Other_organism Sinorhizobium meliloti 2011 taxid=1286640 0.647 SRR17176035 MEDTR-RB-e2011_10_2-A Title MEDTR-RB-e2011_10_2 | Molecule total_RNA | Extract_protocol qiagen ribodepletion | Other_organism Sinorhizobium meliloti 2011 taxid=1286640 -0.5059 SRR17176045 MEDTR-PA-ET2 Title MEDTR-PA-ET | Molecule polyA_RNA | Extract_protocol qiagen PolyA -0.6229 SRR17176065 MEDTR-RB-eBL_10_2_3-A Title MEDTR-RB-eBL_10_2_3 | Molecule total_RNA | Extract_protocol qiagen ribodepletion | Other_organism Sinorhizobium meliloti BL255C taxid=698936 -0.6842 SRR17176066 MEDTR-RB-eBL_10_2_3-B Title MEDTR-RB-eBL_10_2_3 | Molecule total_RNA | Extract_protocol qiagen ribodepletion | Other_organism Sinorhizobium meliloti BL255C taxid=698936 6 SRP018396 Medicago truncatula strain:Jemalong A17/J5 Transcriptome or Gene expression loading run annotation attributes 0.7539 SRR670353 genotype nfp (C31) 0.6328 SRR670348 genotype wt 0.5566 SRR670356 genotype nfp (C31) -0.5906 SRR670349 genotype wt -0.6026 SRR670352 genotype nfp (C31) -0.6462 SRR670355 genotype nfp (C31) 7 ERP118927 Time-course transcriptome analysis of mature nodules in Medicago truncatula grown in split-root under different nitrogen (N) supply loading run annotation attributes 0.6921 ERR3762980 Illumina HiSeq 2500 sequencing; Time-course transcriptome analysis of mature nodules in Medicago truncatula grown in split-root under different nitrogen (N) supply External Id SAMEA6415139 | INSDC last update 2019-12-13T14:11:59Z | Submitter Id E-MTAB-8597:Control_0d_1 | growth condition control | sample name E-MTAB-8597:Control_0d_1 0.4251 ERR3762982 Illumina HiSeq 2500 sequencing; Time-course transcriptome analysis of mature nodules in Medicago truncatula grown in split-root under different nitrogen (N) supply External Id SAMEA6415141 | INSDC last update 2019-12-13T14:11:59Z | Submitter Id E-MTAB-8597:Control_0d_3 | growth condition control | sample name E-MTAB-8597:Control_0d_3 0.4238 ERR3762988 Illumina HiSeq 2500 sequencing; Time-course transcriptome analysis of mature nodules in Medicago truncatula grown in split-root under different nitrogen (N) supply External Id SAMEA6415147 | INSDC last update 2019-12-13T14:12:00Z | Submitter Id E-MTAB-8597:DN_3d_3 | growth condition N-limitation | sample name E-MTAB-8597:DN_3d_3 -0.2354 ERR3762994 Illumina HiSeq 2500 sequencing; Time-course transcriptome analysis of mature nodules in Medicago truncatula grown in split-root under different nitrogen (N) supply External Id SAMEA6415153 | INSDC last update 2019-12-13T14:12:00Z | Submitter Id E-MTAB-8597:SN_3d_3 | growth condition N-satiety | sample name E-MTAB-8597:SN_3d_3 -0.5685 ERR3762986 Illumina HiSeq 2500 sequencing; Time-course transcriptome analysis of mature nodules in Medicago truncatula grown in split-root under different nitrogen (N) supply External Id SAMEA6415145 | INSDC last update 2019-12-13T14:11:59Z | Submitter Id E-MTAB-8597:DN_3d_1 | growth condition N-limitation | sample name E-MTAB-8597:DN_3d_1 -0.7602 ERR3762989 Illumina HiSeq 2500 sequencing; Time-course transcriptome analysis of mature nodules in Medicago truncatula grown in split-root under different nitrogen (N) supply External Id SAMEA6415148 | INSDC last update 2019-12-13T14:12:00Z | Submitter Id E-MTAB-8597:SN_1d_1 | growth condition N-satiety | sample name E-MTAB-8597:SN_1d_1 8 SRP230996 Effects of arbuscular mycorrhizal fungus Rhizophagus irregularis in Medicago truncatula (wild type and SUNN mutant) loading run annotation attributes 0.5899 SRR10506580 0.5852 SRR10506579 0.4097 SRR10506578 -0.859 SRR10506575 -1.0019 SRR10506585 -1.1752 SRR10506584 9 SRP098557 Ethylene signaling is important for isoflavonoid mediated resistance to Rhizoctonia solani in roots of Medicago truncatula loading run annotation attributes 0.5895 SRR5217272 plant genotype A17 (wild type) | days after infection/mock treatment 7 days | disease phenotype moderately resistant to R. solani AG8 0.5204 SRR5217269 plant genotype A17 (wild type) | days after infection/mock treatment 7 days | disease phenotype moderately resistant to R. solani AG8 0.492 SRR5217270 plant genotype A17 (wild type) | days after infection/mock treatment 7 days | disease phenotype moderately resistant to R. solani AG8 -0.4043 SRR5217283 plant genotype sickle mutant (ethylene insensitive, point mutation in A17) | days after infection/mock treatment 7 days | disease phenotype Highly susceptible to R. solani AG8 -0.4241 SRR5217262 plant genotype A17 (wild type) | days after infection/mock treatment 2 days | disease phenotype moderately resistant to R. solani AG8 -0.477 SRR5217263 plant genotype A17 (wild type) | days after infection/mock treatment 2 days | disease phenotype moderately resistant to R. solani AG8 10 SRP349933 MT-DCRISPR2021-NODULES loading run annotation attributes 0.5806 SRR17176346 A17_NOD_CRISPR_DRM_1-B Title A17_NOD_CRISPR_DRM_1 | Other_organism Sinorhizobium meliloti 0.5647 SRR17176345 A17_NOD_CRISPR_DRM_1-A Title A17_NOD_CRISPR_DRM_1 | Other_organism Sinorhizobium meliloti 0.51 SRR17176336 A17_NOD_CRISPR_GUS_1-B Title A17_NOD_CRISPR_GUS_1 | Other_organism Sinorhizobium meliloti 2011 taxid=1286640 -0.4496 SRR17176361 A17_4DPI_CRISPR_EFD2_1-A Title A17_4DPI_CRISPR_EFD2_1 | Other_organism Sinorhizobium meliloti 2011 taxid=1286640 -0.4662 SRR17176368 efd_4DPI_CRISPR_EFD2_2-B Title efd_4DPI_CRISPR_EFD2_2 | Other_organism Sinorhizobium meliloti 2011 taxid=1286640 -0.4854 SRR17176367 efd_4DPI_CRISPR_EFD2_2-A Title efd_4DPI_CRISPR_EFD2_2 | Other_organism Sinorhizobium meliloti 2011 taxid=1286640	Loading 1 SRP230996 Effects of arbuscular mycorrhizal fungus Rhizophagus irregularis in Medicago truncatula (wild type and SUNN mutant) loading run annotation attributes 0.7128 SRR10506578 0.7009 SRR10506590 0.6734 SRR10506586 -0.7396 SRR10506572 -0.7571 SRR10506593 -0.8502 SRR10506575 2 ERP015760 Longitudinal and Diurnal Experiments of M. hapla and M. truncatula loading run annotation attributes 0.7051 ERR1421751 Illumina Genome Analyzer IIx paired end sequencing; Longitudinal and Diurnal Experiments of M. hapla and M. truncatula External Id SAMEA4003662 | Submitter Id E-MTAB-4724:Sample19_root_5_day_noinfection | organism part root | sample name E-MTAB-4724:Sample19_root_5_day_noinfection | time 5 day 0.701 ERR1421703 Illumina Genome Analyzer IIx paired end sequencing; Longitudinal and Diurnal Experiments of M. hapla and M. truncatula External Id SAMEA4003662 | Submitter Id E-MTAB-4724:Sample19_root_5_day_noinfection | organism part root | sample name E-MTAB-4724:Sample19_root_5_day_noinfection | time 5 day 0.6992 ERR1421642 Illumina Genome Analyzer IIx paired end sequencing; Longitudinal and Diurnal Experiments of M. hapla and M. truncatula External Id SAMEA4003662 | Submitter Id E-MTAB-4724:Sample19_root_5_day_noinfection | organism part root | sample name E-MTAB-4724:Sample19_root_5_day_noinfection | time 5 day -0.6855 ERR1421636 Illumina Genome Analyzer IIx paired end sequencing; Longitudinal and Diurnal Experiments of M. hapla and M. truncatula External Id SAMEA4003656 | Submitter Id E-MTAB-4724:Sample13_shoot_4_day_noinfection | organism part shoot | sample name E-MTAB-4724:Sample13_shoot_4_day_noinfection | time 4 day -0.69 ERR1421667 Illumina Genome Analyzer IIx paired end sequencing; Longitudinal and Diurnal Experiments of M. hapla and M. truncatula External Id SAMEA4003656 | Submitter Id E-MTAB-4724:Sample13_shoot_4_day_noinfection | organism part shoot | sample name E-MTAB-4724:Sample13_shoot_4_day_noinfection | time 4 day -0.6901 ERR1421720 Illumina Genome Analyzer IIx paired end sequencing; Longitudinal and Diurnal Experiments of M. hapla and M. truncatula External Id SAMEA4003656 | Submitter Id E-MTAB-4724:Sample13_shoot_4_day_noinfection | organism part shoot | sample name E-MTAB-4724:Sample13_shoot_4_day_noinfection | time 4 day 3 SRP043103 Medicago truncatula Transcriptome or Gene expression loading run annotation attributes 0.5147 SRR1377074 Mt_A17_MYCNS_10-6M_2H+4H_R2 cultivar A17 | treatment non sulphated Myc LCO at 10-6M | age missing 0.4099 SRR1377080 Mt_A17_MYCS_10-6M_2H+4H_R2 cultivar Jemalong A17 | age 4 day old | genotype A17 (wild type) | treatment sulphated (S) Myc-LCOs at 10-6M 0.3881 SRR1377079 Mt_A17_MYCS_10-6M_2H+4H_R1 cultivar Jemalong A17 | age 4 day old | genotype A17 (wild type) | treatment sulphated (S) Myc-LCOs at 10-6M -0.4102 SRR1377069 Mt_DMI3_MYCNS_10-6M_2H+4H_R3 cultivar A17 | treatment non sulphated Myc LCO at 10-6M | age missing -0.4512 SRR1377072 Mt_DMI3_ACN_2H+4H_R3 cultivar A17 | genotype dmi3-1 | treatment acetonitril solvent | age missing -0.4713 SRR1377068 Mt_DMI3_MYCNS_10-6M_2H+4H_R2 cultivar A17 | treatment non sulphated Myc LCO at 10-6M | age missing 4 SRP212693 NODULE INCEPTION recruits the lateral root developmental program for symbiotic nodule organogenesis loading run annotation attributes 0.4647 SRR9623150 time 4h | treatments mock 0.4371 SRR9623155 time 4h | treatments Sinorhizobium meliloti strain 2011 0.4358 SRR9623145 time 2h | treatments Sinorhizobium meliloti strain 2011 -0.4719 SRR9623360 time 72h of lateral root initiation | treatments no treatment -0.5048 SRR9623245 time 96h | treatments mock -0.5465 SRR9623244 time 96h | treatments mock 5 SRP323948 Processing of NODULE INCEPTION controls transition to nitrogen fixation in root nodules loading run annotation attributes 0.4015 SRR14804679 source_name root nodule | genoytpe dnf1-2 mutant in A17 wild type background | treatment Sinorhizobium meliloti 0.2744 SRR14804680 source_name root nodule | genoytpe dnf1-2 mutant in A17 wild type background | treatment Sinorhizobium meliloti 0.2673 SRR14804677 source_name root nodule | genoytpe dnf1-2 mutant in A17 wild type background | treatment Sinorhizobium meliloti -0.1553 SRR14804668 source_name regenerated root structure | genoytpe wild type ecotype jemalong A17 cultivar Jester transformed with pLjUBI:NIN | treatment no treatment -0.1666 SRR14804670 source_name regenerated root structure | genoytpe wild type ecotype jemalong A17 cultivar Jester transformed with pLjUBI:NIN | treatment no treatment -0.198 SRR14804671 source_name regenerated root structure | genoytpe wild type ecotype jemalong A17 cultivar Jester transformed with pLjUBI:NIN | treatment no treatment 6 SRP098561 RNA-seq of mycorrhizal Medicago truncatula roots under K+ deprivation loading run annotation attributes 0.384 SRR5217385 source_name AM+K | inoculation Rhizophagus irregularis | growth protocol +K 0.2029 SRR5217392 source_name NM+K | inoculation control | growth protocol +K 0.1995 SRR5217391 source_name NM+K | inoculation control | growth protocol +K -0.1844 SRR5217395 source_name NM-K | inoculation control | growth protocol -K -0.4177 SRR5217394 source_name NM-K | inoculation control | growth protocol -K -0.435 SRR5217389 source_name AM-K | inoculation Rhizophagus irregularis | growth protocol -K 7 SRP077692 Medicago truncatula Transcriptome or Gene expression loading run annotation attributes 0.3535 SRR3735583 ecotype HM101 | tissue root | treatment Uninoculated 0.3388 SRR3735584 ecotype HM101 | tissue root | treatment Uninoculated 0.1444 SRR3735554 ecotype HM056 | tissue root | treatment Uninoculated -0.1312 SRR3735568 ecotype HM340 | tissue root | treatment Uninoculated -0.1576 SRR3735561 ecotype HM340 | tissue nodule | treatment Inoculated by Sinorhizobium meliloti (KH46c) -0.183 SRR3735558 ecotype HM340 | tissue nodule | treatment Inoculated by Sinorhizobium meliloti (KH46c) 8 SRP018396 Medicago truncatula strain:Jemalong A17/J5 Transcriptome or Gene expression loading run annotation attributes 0.3487 SRR670345 cultivar Jemalong A17 | genotype wt 0.322 SRR670356 cultivar Jemalong A17 | genotype nfp (C31) 0.2288 SRR670351 cultivar Jemalong A17 | genotype nfp (C31) -0.1207 SRR670352 cultivar Jemalong A17 | genotype nfp (C31) -0.1745 SRR670403 cultivar Jemalong J5 | genotype dmi3 (TRV25) -0.4895 SRR670358 cultivar Jemalong J5 | genotype dmi3 (TRV25) 9 ERP105151 CK dependent Rhizobium LCO induced signalling in Medicago truncatula loading run annotation attributes 0.3244 ERR2193160 Illumina HiSeq 2000 paired end sequencing; CK dependent Rhizobium LCO induced signalling in Medicago truncatula External Id SAMEA104375978 | INSDC last update 2017-11-09T15:04:28Z | Submitter Id E-MTAB-3007_2:A17 LCO WT001 | genotype wild type genotype | sample name E-MTAB-3007_2:A17 LCO WT001 | stimulus Rhizobium lipo-chitin oligosaccharide 0.2348 ERR2193162 Illumina HiSeq 2000 paired end sequencing; CK dependent Rhizobium LCO induced signalling in Medicago truncatula External Id SAMEA104375980 | INSDC last update 2017-11-09T15:04:28Z | Submitter Id E-MTAB-3007_2:A17 LCO WT003 | genotype wild type genotype | sample name E-MTAB-3007_2:A17 LCO WT003 | stimulus Rhizobium lipo-chitin oligosaccharide 0.1159 ERR2193161 Illumina HiSeq 2000 paired end sequencing; CK dependent Rhizobium LCO induced signalling in Medicago truncatula External Id SAMEA104375979 | INSDC last update 2017-11-09T15:04:28Z | Submitter Id E-MTAB-3007_2:A17 LCO WT002 | genotype wild type genotype | sample name E-MTAB-3007_2:A17 LCO WT002 | stimulus Rhizobium lipo-chitin oligosaccharide -0.1152 ERR2193167 Illumina HiSeq 2000 paired end sequencing; CK dependent Rhizobium LCO induced signalling in Medicago truncatula External Id SAMEA104375985 | INSDC last update 2017-11-09T15:04:29Z | Submitter Id E-MTAB-3007_2:Mtcre1 LCO WT002 | genotype Mtcre1 mutant | sample name E-MTAB-3007_2:Mtcre1 LCO WT002 | stimulus Rhizobium lipo-chitin oligosaccharide -0.1593 ERR2193169 Illumina HiSeq 2000 paired end sequencing; CK dependent Rhizobium LCO induced signalling in Medicago truncatula External Id SAMEA104375987 | INSDC last update 2017-11-09T15:04:29Z | Submitter Id E-MTAB-3007_2:Mtcre1 noLCO WT001 | genotype Mtcre1 mutant | sample name E-MTAB-3007_2:Mtcre1 noLCO WT001 -0.3336 ERR2193171 Illumina HiSeq 2000 paired end sequencing; CK dependent Rhizobium LCO induced signalling in Medicago truncatula External Id SAMEA104375989 | INSDC last update 2017-11-09T15:04:29Z | Submitter Id E-MTAB-3007_2:Mtcre1 noLCO WT003 | genotype Mtcre1 mutant | sample name E-MTAB-3007_2:Mtcre1 noLCO WT003 10 SRP098557 Ethylene signaling is important for isoflavonoid mediated resistance to Rhizoctonia solani in roots of Medicago truncatula loading run annotation attributes 0.3195 SRR5217275 plant genotype sickle mutant (ethylene insensitive, point mutation in A17) | days after infection/mock treatment 2 days | disease phenotype Highly susceptible to R. solani AG8 0.3003 SRR5217265 plant genotype A17 (wild type) | days after infection/mock treatment 2 days | disease phenotype moderately resistant to R. solani AG8 0.291 SRR5217266 plant genotype A17 (wild type) | days after infection/mock treatment 2 days | disease phenotype moderately resistant to R. solani AG8 -0.4162 SRR5217280 plant genotype sickle mutant (ethylene insensitive, point mutation in A17) | days after infection/mock treatment 7 days | disease phenotype Highly susceptible to R. solani AG8 -0.4277 SRR5217284 plant genotype sickle mutant (ethylene insensitive, point mutation in A17) | days after infection/mock treatment 7 days | disease phenotype Highly susceptible to R. solani AG8 -0.5258 SRR5217285 plant genotype sickle mutant (ethylene insensitive, point mutation in A17) | days after infection/mock treatment 7 days | disease phenotype Highly susceptible to R. solani AG8	Loading 1 SRP212693 NODULE INCEPTION recruits the lateral root developmental program for symbiotic nodule organogenesis loading run annotation attributes 0.7323 SRR9623298 time 24h | genotype lbd16/lbd11_dobulemutant_ecotype_R108 | treatments Sinorhizobium meliloti strain 2011 0.7208 SRR9623302 time 24h | genotype lbd16/lbd11_dobulemutant_ecotype_R108 | treatments mock 0.7159 SRR9623290 time 24h | genotype lbd16_mutant_ecotype_R108 | treatments Sinorhizobium meliloti strain 2011 -0.5292 SRR9623256 time 168h | genotype wild type ecotype jemalong cultivar Jester | treatments mock -0.5293 SRR9623247 time 96h | genotype wild type ecotype jemalong cultivar Jester | treatments mock -0.5531 SRR9623248 time 120h | genotype wild type ecotype jemalong cultivar Jester | treatments mock 2 SRP359760 Medicago truncatula seedling treatment with Pythium oligandrum oospores within in-vitro system. loading run annotation attributes 0.3098 SRR18015527 treatment group A17 (Control) | time point 3 days post treatment | replicate Biological replicate 6 0.3016 SRR18015529 treatment group A17 (Control) | time point 3 days post treatment | replicate Biological replicate 4 0.3003 SRR18015532 treatment group A17 (Control) | time point 3 days post treatment | replicate Biological replicate 1 -0.2701 SRR18015485 treatment group P. oligandrum | time point 14 days post treatment | replicate Biological replicate 6 -0.3039 SRR18015486 treatment group P. oligandrum | time point 14 days post treatment | replicate Biological replicate 5 -0.3532 SRR18015487 treatment group P. oligandrum | time point 14 days post treatment | replicate Biological replicate 4 3 SRP323948 Processing of NODULE INCEPTION controls transition to nitrogen fixation in root nodules loading run annotation attributes 0.4699 SRR14804682 source_name root nodule | genoytpe nin-16 mutant in R108 wild type background | treatment Sinorhizobium meliloti 0.4504 SRR14804688 source_name root nodule | genoytpe wild type ecotype R108 | treatment Sinorhizobium meliloti 0.4473 SRR14804683 source_name root nodule | genoytpe nin-16 mutant in R108 wild type background | treatment Sinorhizobium meliloti -0.2295 SRR14804665 source_name regenerated root structure | genoytpe wild type ecotype jemalong A17 cultivar Jester transformed with pLjUBI:NIN | treatment no treatment -0.2803 SRR14804666 source_name regenerated root structure | genoytpe wild type ecotype jemalong A17 cultivar Jester transformed with pLjUBI:NIN | treatment no treatment -0.3061 SRR14804668 source_name regenerated root structure | genoytpe wild type ecotype jemalong A17 cultivar Jester transformed with pLjUBI:NIN | treatment no treatment 4 SRP077692 Medicago truncatula Transcriptome or Gene expression loading run annotation attributes 0.351 SRR3735558 ecotype HM340 | tissue nodule | treatment Inoculated by Sinorhizobium meliloti (KH46c) 0.3436 SRR3735561 ecotype HM340 | tissue nodule | treatment Inoculated by Sinorhizobium meliloti (KH46c) 0.3391 SRR3735562 ecotype HM340 | tissue nodule | treatment Inoculated by Sinorhizobium medicae (WSM419) -0.2125 SRR3735583 ecotype HM101 | tissue root | treatment Uninoculated -0.22 SRR3735584 ecotype HM101 | tissue root | treatment Uninoculated -0.2332 SRR3735582 ecotype HM101 | tissue root | treatment Uninoculated 5 SRP229031 ACHILLEUS-RNASEQ loading run annotation attributes 0.1658 SRR10416769 MEDTR-7dpi-NOD-M3-A Title MEDTR-7dpi-NOD-M3 0.1629 SRR10416770 MEDTR-7dpi-NOD-M3-B Title MEDTR-7dpi-NOD-M3 0.1528 SRR10416773 MEDTR-7dpi-NOD-Rs-M3-A Title MEDTR-7dpi-NOD-Rs-M3 -0.1692 SRR10416745 MEDTR-7dpi-ROOT-Rs-M2-A Title MEDTR-7dpi-ROOT-Rs-M2 -0.2038 SRR10416739 MEDTR-2dpi-ROOT-Rs-M4-A Title MEDTR-2dpi-ROOT-Rs-M4 -0.2162 SRR10416740 MEDTR-2dpi-ROOT-Rs-M4-B Title MEDTR-2dpi-ROOT-Rs-M4 6 ERP015760 Longitudinal and Diurnal Experiments of M. hapla and M. truncatula loading run annotation attributes 0.1423 ERR1421645 Illumina Genome Analyzer IIx paired end sequencing; Longitudinal and Diurnal Experiments of M. hapla and M. truncatula External Id SAMEA4003665 | Submitter Id E-MTAB-4724:Sample11_shoot_1_day_noinfection | organism part shoot | sample name E-MTAB-4724:Sample11_shoot_1_day_noinfection 0.1411 ERR1421766 Illumina Genome Analyzer IIx paired end sequencing; Longitudinal and Diurnal Experiments of M. hapla and M. truncatula External Id SAMEA4003665 | Submitter Id E-MTAB-4724:Sample11_shoot_1_day_noinfection | organism part shoot | sample name E-MTAB-4724:Sample11_shoot_1_day_noinfection 0.1401 ERR1421694 Illumina Genome Analyzer IIx paired end sequencing; Longitudinal and Diurnal Experiments of M. hapla and M. truncatula External Id SAMEA4003665 | Submitter Id E-MTAB-4724:Sample11_shoot_1_day_noinfection | organism part shoot | sample name E-MTAB-4724:Sample11_shoot_1_day_noinfection -0.1781 ERR1421699 Illumina Genome Analyzer IIx paired end sequencing; Longitudinal and Diurnal Experiments of M. hapla and M. truncatula External Id SAMEA4003659 | Submitter Id E-MTAB-4724:Sample16_root_1_day_noinfection | organism part root | sample name E-MTAB-4724:Sample16_root_1_day_noinfection -0.1798 ERR1421675 Illumina Genome Analyzer IIx paired end sequencing; Longitudinal and Diurnal Experiments of M. hapla and M. truncatula External Id SAMEA4003659 | Submitter Id E-MTAB-4724:Sample16_root_1_day_noinfection | organism part root | sample name E-MTAB-4724:Sample16_root_1_day_noinfection -0.1821 ERR1421748 Illumina Genome Analyzer IIx paired end sequencing; Longitudinal and Diurnal Experiments of M. hapla and M. truncatula External Id SAMEA4003659 | Submitter Id E-MTAB-4724:Sample16_root_1_day_noinfection | organism part root | sample name E-MTAB-4724:Sample16_root_1_day_noinfection 7 SRP230996 Effects of arbuscular mycorrhizal fungus Rhizophagus irregularis in Medicago truncatula (wild type and SUNN mutant) loading run annotation attributes 0.1904 SRR10506576 0.1618 SRR10506577 0.1503 SRR10506593 -0.1484 SRR10506587 -0.149 SRR10506588 -0.1613 SRR10506583 8 SRP043103 Medicago truncatula Transcriptome or Gene expression loading run annotation attributes 0.0658 SRR1377074 Mt_A17_MYCNS_10-6M_2H+4H_R2 treatment non sulphated Myc LCO at 10-6M 0.058 SRR1377072 Mt_DMI3_ACN_2H+4H_R3 genotype dmi3-1 | treatment acetonitril solvent 0.0576 SRR1377066 Mt_DMI3_MYCS_10-6M_2H+4H_R3 treatment sulphated (S) Myc-LCOs at 10-6M -0.11 SRR1377064 Mt_DMI3_MYCS_10-6M_2H+4H_R1 treatment sulphated (S) Myc-LCOs at 10-6M -0.1123 SRR1377058 Mt_NSP1_MYCNS_10-6M_2H+4H_R1 genotype nsp1-1 | treatment non sulphated Myc LCO at 10-6M -0.1559 SRR1377061 Mt_NSP1_ACN_2H+4H_R1 treatment acetonitril solvent | genotype nsp1-1 9 SRP316040 Salt stress enhances early symbiotic gene expression in Medicago truncatula and induces a stress-specific set of rhizobium-responsive genes loading run annotation attributes 0.251 SRR14309949 agent S. meliloti 1021, no Salt 0.111 SRR14309950 agent S. meliloti 1021, no Salt 0.092 SRR14309944 agent mock -0.1279 SRR14309951 agent 100 mM NaCl, Inoculated with S. meliloti 1021 -0.1365 SRR14309942 agent mock -0.1404 SRR14309948 agent S. meliloti 1021, no Salt 10 SRP220100 The U-box family genes in Medicago truncatula: key elements in response to salt, cold, and drought stresses loading run annotation attributes 0.0738 SRR10058825 stress Salt | time 12h 0.0493 SRR10058823 stress Salt | time 2h 0.0415 SRR10058820 stress Drought | time 6h -0.1001 SRR10058814 stress Cold | time 0h -0.103 SRR10058818 stress Drought | time 0h -0.1125 SRR10058822 stress Salt | time 0h	Loading 1 SRP230996 Effects of arbuscular mycorrhizal fungus Rhizophagus irregularis in Medicago truncatula (wild type and SUNN mutant) loading run annotation attributes 0.6308 SRR10506584 0.5162 SRR10506585 0.3693 SRR10506588 -0.4775 SRR10506576 -0.5146 SRR10506573 -0.5348 SRR10506574 2 SRP349926 MT-EFFOR2019 loading run annotation attributes 0.4304 SRR17176066 MEDTR-RB-eBL_10_2_3-B Title MEDTR-RB-eBL_10_2_3 | Molecule total_RNA | Extract_protocol qiagen ribodepletion | Other_organism Sinorhizobium meliloti BL255C taxid=698936 0.4264 SRR17176065 MEDTR-RB-eBL_10_2_3-A Title MEDTR-RB-eBL_10_2_3 | Molecule total_RNA | Extract_protocol qiagen ribodepletion | Other_organism Sinorhizobium meliloti BL255C taxid=698936 0.3756 SRR17176068 MEDTR-RB-ABL_10_2_1-B Title MEDTR-RB-ABL_10_2_1 | Molecule total_RNA | Extract_protocol qiagen ribodepletion | Other_organism Sinorhizobium meliloti BL255C taxid=698936 -0.513 SRR17176081 MEDTR-PA-A2011_4_2 Title MEDTR-PA-A2011_4 | Molecule polyA_RNA | Extract_protocol qiagen PolyA | Other_organism Sinorhizobium meliloti 2011 taxid=1286640 -0.5183 SRR17176080 MEDTR-PA-A2011_4_1 Title MEDTR-PA-A2011_4 | Molecule polyA_RNA | Extract_protocol qiagen PolyA | Other_organism Sinorhizobium meliloti 2011 taxid=1286640 -0.5287 SRR17176082 MEDTR-PA-A2011_4_3 Title MEDTR-PA-A2011_4 | Molecule polyA_RNA | Extract_protocol qiagen PolyA | Other_organism Sinorhizobium meliloti 2011 taxid=1286640 3 SRP220100 The U-box family genes in Medicago truncatula: key elements in response to salt, cold, and drought stresses loading run annotation attributes 0.3957 SRR10058820 stress Drought | time 6h 0.3155 SRR10058825 stress Salt | time 12h 0.1411 SRR10058819 stress Drought | time 2h -0.3161 SRR10058822 stress Salt | time 0h -0.3374 SRR10058818 stress Drought | time 0h -0.4711 SRR10058816 stress Cold | time 6h 4 SRP316040 Salt stress enhances early symbiotic gene expression in Medicago truncatula and induces a stress-specific set of rhizobium-responsive genes loading run annotation attributes 0.3406 SRR14309951 agent 100 mM NaCl, Inoculated with S. meliloti 1021 0.2975 SRR14309945 agent 100 mM NaCl, mock Inoc 0.2025 SRR14309943 agent mock -0.2388 SRR14309952 agent 100 mM NaCl, Inoculated with S. meliloti 1021 -0.2423 SRR14309946 agent 100 mM NaCl, mock Inoc -0.4658 SRR14309949 agent S. meliloti 1021, no Salt 5 SRP212693 NODULE INCEPTION recruits the lateral root developmental program for symbiotic nodule organogenesis loading run annotation attributes 0.4861 SRR9623258 time 168h | treatments mock 0.4653 SRR9623259 time 168h | treatments mock 0.4617 SRR9623257 time 168h | treatments mock -0.4209 SRR9623363 time 72h of lateral root initiation | treatments turned 135° for 12 hours -0.4287 SRR9623358 time 60h of lateral root initiation | treatments turned 135° for 12 hours -0.4576 SRR9623356 time 60h of lateral root initiation | treatments turned 135° for 12 hours 6 SRP098557 Ethylene signaling is important for isoflavonoid mediated resistance to Rhizoctonia solani in roots of Medicago truncatula loading run annotation attributes 0.4768 SRR5217283 plant genotype sickle mutant (ethylene insensitive, point mutation in A17) | disease phenotype Highly susceptible to R. solani AG8 0.3057 SRR5217285 plant genotype sickle mutant (ethylene insensitive, point mutation in A17) | disease phenotype Highly susceptible to R. solani AG8 0.241 SRR5217271 plant genotype A17 (wild type) | disease phenotype moderately resistant to R. solani AG8 -0.3165 SRR5217282 plant genotype sickle mutant (ethylene insensitive, point mutation in A17) | disease phenotype Highly susceptible to R. solani AG8 -0.3432 SRR5217270 plant genotype A17 (wild type) | disease phenotype moderately resistant to R. solani AG8 -0.4423 SRR5217268 plant genotype A17 (wild type) | disease phenotype moderately resistant to R. solani AG8 7 SRP359760 Medicago truncatula seedling treatment with Pythium oligandrum oospores within in-vitro system. loading run annotation attributes 0.5143 SRR18015498 treatment group P. oligandrum | time point 7 days post treatment | replicate Biological replicate 5 0.4897 SRR18015500 treatment group P. oligandrum | time point 7 days post treatment | replicate Biological replicate 3 0.4579 SRR18015486 treatment group P. oligandrum | time point 14 days post treatment | replicate Biological replicate 5 -0.3972 SRR18015516 treatment group A17 (Control) | time point 5 days post treatment | replicate Biological replicate 5 -0.3988 SRR18015507 treatment group A17 (Control) | time point 7 days post treatment | replicate Biological replicate 2 -0.4195 SRR18015505 treatment group A17 (Control) | time point 7 days post treatment | replicate Biological replicate 4 8 SRP158577 The transcriptomic response to a short day to long day shift in the reference legume Medicago truncatula loading run annotation attributes 0.3676 SRR7738212 source_name SD_ZT0, 2 trifoliate leaves | age 13 days | condition SD | timepoint ZT0 0.3351 SRR7738211 source_name SD_ZT0, 2 trifoliate leaves | age 13 days | condition SD | timepoint ZT0 0.2718 SRR7738213 source_name SD_ZT0, 2 trifoliate leaves | age 13 days | condition SD | timepoint ZT0 -0.2835 SRR7738223 source_name LD_ZT4, 2 trifoliate leaves | age 15 days | condition Shifted to LD | timepoint ZT4 -0.3685 SRR7738225 source_name LD_ZT4, 2 trifoliate leaves | age 15 days | condition Shifted to LD | timepoint ZT4 -0.4038 SRR7738224 source_name LD_ZT4, 2 trifoliate leaves | age 15 days | condition Shifted to LD | timepoint ZT4 9 ERP015760 Longitudinal and Diurnal Experiments of M. hapla and M. truncatula loading run annotation attributes 0.4454 ERR1421725 Illumina Genome Analyzer IIx paired end sequencing; Longitudinal and Diurnal Experiments of M. hapla and M. truncatula External Id SAMEA4003660 | Submitter Id E-MTAB-4724:Sample17_root_2_day_noinfection | organism part root | sample name E-MTAB-4724:Sample17_root_2_day_noinfection | time 2 day 0.4437 ERR1421700 Illumina Genome Analyzer IIx paired end sequencing; Longitudinal and Diurnal Experiments of M. hapla and M. truncatula External Id SAMEA4003660 | Submitter Id E-MTAB-4724:Sample17_root_2_day_noinfection | organism part root | sample name E-MTAB-4724:Sample17_root_2_day_noinfection | time 2 day 0.4425 ERR1421640 Illumina Genome Analyzer IIx paired end sequencing; Longitudinal and Diurnal Experiments of M. hapla and M. truncatula External Id SAMEA4003660 | Submitter Id E-MTAB-4724:Sample17_root_2_day_noinfection | organism part root | sample name E-MTAB-4724:Sample17_root_2_day_noinfection | time 2 day -0.3911 ERR1421746 Illumina Genome Analyzer IIx paired end sequencing; Longitudinal and Diurnal Experiments of M. hapla and M. truncatula External Id SAMEA4003657 | Submitter Id E-MTAB-4724:Sample14_shoot_5_day_noinfection | organism part shoot | sample name E-MTAB-4724:Sample14_shoot_5_day_noinfection | time 5 day -0.3931 ERR1421694 Illumina Genome Analyzer IIx paired end sequencing; Longitudinal and Diurnal Experiments of M. hapla and M. truncatula External Id SAMEA4003665 | Submitter Id E-MTAB-4724:Sample11_shoot_1_day_noinfection | organism part shoot | sample name E-MTAB-4724:Sample11_shoot_1_day_noinfection | time 1 day -0.4 ERR1421742 Illumina Genome Analyzer IIx paired end sequencing; Longitudinal and Diurnal Experiments of M. hapla and M. truncatula External Id SAMEA4003665 | Submitter Id E-MTAB-4724:Sample11_shoot_1_day_noinfection | organism part shoot | sample name E-MTAB-4724:Sample11_shoot_1_day_noinfection | time 1 day 10 SRP043103 Medicago truncatula Transcriptome or Gene expression loading run annotation attributes 0.3316 SRR1377068 Mt_DMI3_MYCNS_10-6M_2H+4H_R2 cultivar A17 | treatment non sulphated Myc LCO at 10-6M | age missing 0.3141 SRR1377066 Mt_DMI3_MYCS_10-6M_2H+4H_R3 cultivar A17 | treatment sulphated (S) Myc-LCOs at 10-6M | age missing 0.2695 SRR1377065 Mt_DMI3_MYCS_10-6M_2H+4H_R2 cultivar A17 | treatment sulphated (S) Myc-LCOs at 10-6M | age missing -0.2377 SRR1377058 Mt_NSP1_MYCNS_10-6M_2H+4H_R1 cultivar A17 | genotype nsp1-1 | treatment non sulphated Myc LCO at 10-6M | age missing -0.3028 SRR1377077 Mt_A17_ACN_2H+4H_R2 cultivar Jemalong A17 | age 4 day old | genotype A17 (wild type) | growth_protocol control (acetonitrile solvent) -0.3696 SRR1377078 Mt_A17_ACN_2H+4H_R3 cultivar Jemalong A17 | age 4 day old | genotype A17 (wild type) | growth_protocol control (acetonitrile solvent)	Loading 1 SRP220100 The U-box family genes in Medicago truncatula: key elements in response to salt, cold, and drought stresses loading run annotation attributes 0.495 SRR10058815 stress Cold | time 2h 0.4124 SRR10058814 stress Cold | time 0h 0.3655 SRR10058817 stress Cold | time 12h -0.3237 SRR10058816 stress Cold | time 6h -0.4926 SRR10058823 stress Salt | time 2h -0.5799 SRR10058824 stress Salt | time 6h 2 SRP212693 NODULE INCEPTION recruits the lateral root developmental program for symbiotic nodule organogenesis loading run annotation attributes 0.5882 SRR9623224 time 48h | genotype wild type ecotype jemalong cultivar Jester | treatments Sinorhizobium meliloti strain 2011 0.5626 SRR9623223 time 48h | genotype wild type ecotype jemalong cultivar Jester | treatments Sinorhizobium meliloti strain 2011 0.5525 SRR9623235 time 72h | genotype wild type ecotype jemalong cultivar Jester | treatments Sinorhizobium meliloti strain 2011 -0.4652 SRR9623272 time 24h | genotype nin mutant ecotype jemalong cultivar Jester | treatments mock -0.494 SRR9623150 time 4h | genotype wild type ecotype jemalong cultivar Jester | treatments mock -0.5443 SRR9623266 time 12h | genotype nin mutant ecotype jemalong cultivar Jester | treatments mock 3 SRP043103 Medicago truncatula Transcriptome or Gene expression loading run annotation attributes 0.6487 SRR1377066 Mt_DMI3_MYCS_10-6M_2H+4H_R3 cultivar A17 | treatment sulphated (S) Myc-LCOs at 10-6M | age missing 0.4695 SRR1377068 Mt_DMI3_MYCNS_10-6M_2H+4H_R2 cultivar A17 | treatment non sulphated Myc LCO at 10-6M | age missing 0.3324 SRR1377072 Mt_DMI3_ACN_2H+4H_R3 cultivar A17 | genotype dmi3-1 | treatment acetonitril solvent | age missing -0.4578 SRR1377078 Mt_A17_ACN_2H+4H_R3 cultivar Jemalong A17 | age 4 day old | genotype A17 (wild type) | growth_protocol control (acetonitrile solvent) -0.4614 SRR1377062 Mt_NSP1_ACN_2H+4H_R2 cultivar A17 | treatment acetonitril solvent | genotype nsp1-1 | age missing -0.4717 SRR1377070 Mt_DMI3_ACN_2H+4H_R1 cultivar A17 | genotype dmi3-1 | treatment acetonitril solvent | age missing 4 SRP018396 Medicago truncatula strain:Jemalong A17/J5 Transcriptome or Gene expression loading run annotation attributes 0.4541 SRR670352 cultivar Jemalong A17 | genotype nfp (C31) 0.3166 SRR670403 cultivar Jemalong J5 | genotype dmi3 (TRV25) 0.2909 SRR670354 cultivar Jemalong A17 | genotype nfp (C31) -0.3737 SRR670348 cultivar Jemalong A17 | genotype wt -0.3798 SRR670404 cultivar Jemalong J5 | genotype dmi3 (TRV25) -0.4452 SRR670357 cultivar Jemalong J5 | genotype dmi3 (TRV25) 5 SRP349926 MT-EFFOR2019 loading run annotation attributes 0.549 SRR17176081 MEDTR-PA-A2011_4_2 Title MEDTR-PA-A2011_4 | Molecule polyA_RNA | Extract_protocol qiagen PolyA | Other_organism Sinorhizobium meliloti 2011 taxid=1286640 0.4946 SRR17176082 MEDTR-PA-A2011_4_3 Title MEDTR-PA-A2011_4 | Molecule polyA_RNA | Extract_protocol qiagen PolyA | Other_organism Sinorhizobium meliloti 2011 taxid=1286640 0.4892 SRR17176080 MEDTR-PA-A2011_4_1 Title MEDTR-PA-A2011_4 | Molecule polyA_RNA | Extract_protocol qiagen PolyA | Other_organism Sinorhizobium meliloti 2011 taxid=1286640 -0.3695 SRR17176029 MEDTR-RB-A2011_10_1-A Title MEDTR-RB-A2011_10_1 | Molecule total_RNA | Extract_protocol qiagen ribodepletion | Other_organism Sinorhizobium meliloti 2011 taxid=1286640 -0.3994 SRR17176035 MEDTR-RB-e2011_10_2-A Title MEDTR-RB-e2011_10_2 | Molecule total_RNA | Extract_protocol qiagen ribodepletion | Other_organism Sinorhizobium meliloti 2011 taxid=1286640 -0.4024 SRR17176055 MEDTR-PA-eBL_10_2_3 Title MEDTR-PA-eBL_10_2 | Molecule polyA_RNA | Extract_protocol qiagen PolyA | Other_organism Sinorhizobium meliloti BL255C taxid=698936 6 SRP359760 Medicago truncatula seedling treatment with Pythium oligandrum oospores within in-vitro system. loading run annotation attributes 0.394 SRR18015502 treatment group P. oligandrum | time point 7 days post treatment | replicate Biological replicate 1 0.372 SRR18015509 treatment group P. oligandrum | time point 5 days post treatment | replicate Biological replicate 6 0.3364 SRR18015511 treatment group P. oligandrum | time point 5 days post treatment | replicate Biological replicate 4 -0.3094 SRR18015525 treatment group P. oligandrum | time point 3 days post treatment | replicate Biological replicate 2 -0.368 SRR18015526 treatment group P. oligandrum | time point 3 days post treatment | replicate Biological replicate 1 -0.4004 SRR18015516 treatment group A17 (Control) | time point 5 days post treatment | replicate Biological replicate 5 7 SRP229031 ACHILLEUS-RNASEQ loading run annotation attributes 0.3587 SRR10416783 MEDTR-7dpi-ROOT-Rs-M3-A Title MEDTR-7dpi-ROOT-Rs-M3 0.2243 SRR10416731 MEDTR-7dpi-ROOT-Rs-M4-A Title MEDTR-7dpi-ROOT-Rs-M4 0.1979 SRR10416732 MEDTR-7dpi-ROOT-Rs-M4-B Title MEDTR-7dpi-ROOT-Rs-M4 -0.3404 SRR10416785 MEDTR-2dpi-ROOT-M2-A Title MEDTR-2dpi-ROOT-M2 -0.355 SRR10416748 MEDTR-1dpi-ROOT-M3-B Title MEDTR-1dpi-ROOT-M3 -0.3709 SRR10416786 MEDTR-2dpi-ROOT-M2-B Title MEDTR-2dpi-ROOT-M2 8 SRP098557 Ethylene signaling is important for isoflavonoid mediated resistance to Rhizoctonia solani in roots of Medicago truncatula loading run annotation attributes 0.3433 SRR5217262 plant genotype A17 (wild type) | days after infection/mock treatment 2 days | disease phenotype moderately resistant to R. solani AG8 0.3362 SRR5217277 plant genotype sickle mutant (ethylene insensitive, point mutation in A17) | days after infection/mock treatment 2 days | disease phenotype Highly susceptible to R. solani AG8 0.311 SRR5217265 plant genotype A17 (wild type) | days after infection/mock treatment 2 days | disease phenotype moderately resistant to R. solani AG8 -0.3352 SRR5217280 plant genotype sickle mutant (ethylene insensitive, point mutation in A17) | days after infection/mock treatment 7 days | disease phenotype Highly susceptible to R. solani AG8 -0.3447 SRR5217271 plant genotype A17 (wild type) | days after infection/mock treatment 7 days | disease phenotype moderately resistant to R. solani AG8 -0.3588 SRR5217269 plant genotype A17 (wild type) | days after infection/mock treatment 7 days | disease phenotype moderately resistant to R. solani AG8 9 SRP316040 Salt stress enhances early symbiotic gene expression in Medicago truncatula and induces a stress-specific set of rhizobium-responsive genes loading run annotation attributes 0.3293 SRR14309952 agent 100 mM NaCl, Inoculated with S. meliloti 1021 0.2601 SRR14309948 agent S. meliloti 1021, no Salt 0.2082 SRR14309951 agent 100 mM NaCl, Inoculated with S. meliloti 1021 -0.1451 SRR14309945 agent 100 mM NaCl, mock Inoc -0.3195 SRR14309943 agent mock -0.3365 SRR14309949 agent S. meliloti 1021, no Salt 10 ERP118927 Time-course transcriptome analysis of mature nodules in Medicago truncatula grown in split-root under different nitrogen (N) supply loading run annotation attributes 0.3103 ERR3762981 Illumina HiSeq 2500 sequencing; Time-course transcriptome analysis of mature nodules in Medicago truncatula grown in split-root under different nitrogen (N) supply External Id SAMEA6415140 | INSDC last update 2019-12-13T14:11:59Z | Submitter Id E-MTAB-8597:Control_0d_2 | growth condition control | sample name E-MTAB-8597:Control_0d_2 0.2941 ERR3762986 Illumina HiSeq 2500 sequencing; Time-course transcriptome analysis of mature nodules in Medicago truncatula grown in split-root under different nitrogen (N) supply External Id SAMEA6415145 | INSDC last update 2019-12-13T14:11:59Z | Submitter Id E-MTAB-8597:DN_3d_1 | growth condition N-limitation | sample name E-MTAB-8597:DN_3d_1 0.21 ERR3762984 Illumina HiSeq 2500 sequencing; Time-course transcriptome analysis of mature nodules in Medicago truncatula grown in split-root under different nitrogen (N) supply External Id SAMEA6415143 | INSDC last update 2019-12-13T14:11:59Z | Submitter Id E-MTAB-8597:DN_1d_2 | growth condition N-limitation | sample name E-MTAB-8597:DN_1d_2 -0.1546 ERR3762980 Illumina HiSeq 2500 sequencing; Time-course transcriptome analysis of mature nodules in Medicago truncatula grown in split-root under different nitrogen (N) supply External Id SAMEA6415139 | INSDC last update 2019-12-13T14:11:59Z | Submitter Id E-MTAB-8597:Control_0d_1 | growth condition control | sample name E-MTAB-8597:Control_0d_1 -0.2416 ERR3762990 Illumina HiSeq 2500 sequencing; Time-course transcriptome analysis of mature nodules in Medicago truncatula grown in split-root under different nitrogen (N) supply External Id SAMEA6415149 | INSDC last update 2019-12-13T14:12:00Z | Submitter Id E-MTAB-8597:SN_1d_2 | growth condition N-satiety | sample name E-MTAB-8597:SN_1d_2 -0.3187 ERR3762991 Illumina HiSeq 2500 sequencing; Time-course transcriptome analysis of mature nodules in Medicago truncatula grown in split-root under different nitrogen (N) supply External Id SAMEA6415150 | INSDC last update 2019-12-13T14:12:00Z | Submitter Id E-MTAB-8597:SN_1d_3 | growth condition N-satiety | sample name E-MTAB-8597:SN_1d_3	Loading 1 SRP212693 NODULE INCEPTION recruits the lateral root developmental program for symbiotic nodule organogenesis loading run annotation attributes 0.5223 SRR9623320 source_name 2-3mm segment of root | time 12h of lateral root initiation | tissue 2-3mm segment of root | genotype wild type ecotype jemalong cultivar Jester | treatments no treatment 0.5181 SRR9623325 source_name 2-3mm segment of root | time 12h of lateral root initiation | tissue 2-3mm segment of root | genotype wild type ecotype jemalong cultivar Jester | treatments turned 135° for 12 hours 0.5133 SRR9623376 source_name regenerated root structure | tissue regenerated root structure | genotype wild type ecotype jemalong cultivar Jester transformed with pLjUBI:GFP | treatments no treatment -0.5071 SRR9623209 source_name 2-3mm segment of root | time 24h | tissue 2-3mm segment of root | genotype wild type ecotype jemalong cultivar Jester | treatments Sinorhizobium meliloti strain 2011 -0.5108 SRR9623207 source_name 2-3mm segment of root | time 24h | tissue 2-3mm segment of root | genotype wild type ecotype jemalong cultivar Jester | treatments mock -0.5557 SRR9623204 source_name 2-3mm segment of root | time 24h | tissue 2-3mm segment of root | genotype wild type ecotype jemalong cultivar Jester | treatments mock 2 SRP359760 Medicago truncatula seedling treatment with Pythium oligandrum oospores within in-vitro system. loading run annotation attributes 0.3588 SRR18015509 treatment group P. oligandrum | time point 5 days post treatment | replicate Biological replicate 6 0.3502 SRR18015500 treatment group P. oligandrum | time point 7 days post treatment | replicate Biological replicate 3 0.3253 SRR18015513 treatment group P. oligandrum | time point 5 days post treatment | replicate Biological replicate 2 -0.3023 SRR18015493 treatment group A17 (Control) | time point 14 days post treatment | replicate Biological replicate 4 -0.3125 SRR18015495 treatment group A17 (Control) | time point 14 days post treatment | replicate Biological replicate 2 -0.3435 SRR18015491 treatment group A17 (Control) | time point 14 days post treatment | replicate Biological replicate 6 3 SRP098557 Ethylene signaling is important for isoflavonoid mediated resistance to Rhizoctonia solani in roots of Medicago truncatula loading run annotation attributes 0.3462 SRR5217273 plant genotype A17 (wild type) | days after infection/mock treatment 7 days | disease phenotype moderately resistant to R. solani AG8 0.2701 SRR5217283 plant genotype sickle mutant (ethylene insensitive, point mutation in A17) | days after infection/mock treatment 7 days | disease phenotype Highly susceptible to R. solani AG8 0.2268 SRR5217281 plant genotype sickle mutant (ethylene insensitive, point mutation in A17) | days after infection/mock treatment 7 days | disease phenotype Highly susceptible to R. solani AG8 -0.2044 SRR5217277 plant genotype sickle mutant (ethylene insensitive, point mutation in A17) | days after infection/mock treatment 2 days | disease phenotype Highly susceptible to R. solani AG8 -0.2321 SRR5217275 plant genotype sickle mutant (ethylene insensitive, point mutation in A17) | days after infection/mock treatment 2 days | disease phenotype Highly susceptible to R. solani AG8 -0.2347 SRR5217278 plant genotype sickle mutant (ethylene insensitive, point mutation in A17) | days after infection/mock treatment 2 days | disease phenotype Highly susceptible to R. solani AG8 4 SRP316040 Salt stress enhances early symbiotic gene expression in Medicago truncatula and induces a stress-specific set of rhizobium-responsive genes loading run annotation attributes 0.301 SRR14309951 agent 100 mM NaCl, Inoculated with S. meliloti 1021 0.1509 SRR14309944 agent mock 0.1148 SRR14309953 agent 100 mM NaCl, Inoculated with S. meliloti 1021 -0.1792 SRR14309945 agent 100 mM NaCl, mock Inoc -0.1847 SRR14309942 agent mock -0.3192 SRR14309948 agent S. meliloti 1021, no Salt 5 SRP043103 Medicago truncatula Transcriptome or Gene expression loading run annotation attributes 0.2852 SRR1377076 Mt_A17_ACN_2H+4H_R1 cultivar Jemalong A17 | age 4 day old | genotype A17 (wild type) | growth_protocol control (acetonitrile solvent) 0.2658 SRR1377080 Mt_A17_MYCS_10-6M_2H+4H_R2 cultivar Jemalong A17 | age 4 day old | genotype A17 (wild type) | treatment sulphated (S) Myc-LCOs at 10-6M 0.21 SRR1377079 Mt_A17_MYCS_10-6M_2H+4H_R1 cultivar Jemalong A17 | age 4 day old | genotype A17 (wild type) | treatment sulphated (S) Myc-LCOs at 10-6M -0.1895 SRR1377072 Mt_DMI3_ACN_2H+4H_R3 cultivar A17 | genotype dmi3-1 | treatment acetonitril solvent | age missing -0.1914 SRR1377062 Mt_NSP1_ACN_2H+4H_R2 cultivar A17 | treatment acetonitril solvent | genotype nsp1-1 | age missing -0.2698 SRR1377071 Mt_DMI3_ACN_2H+4H_R2 cultivar A17 | genotype dmi3-1 | treatment acetonitril solvent | age missing 6 ERP015760 Longitudinal and Diurnal Experiments of M. hapla and M. truncatula loading run annotation attributes 0.2539 ERR1421656 Illumina Genome Analyzer IIx paired end sequencing; Longitudinal and Diurnal Experiments of M. hapla and M. truncatula External Id SAMEA4003655 | Submitter Id E-MTAB-4724:Sample12_shoot_2_day_noinfection | organism part shoot | sample name E-MTAB-4724:Sample12_shoot_2_day_noinfection | time 2 day 0.253 ERR1421635 Illumina Genome Analyzer IIx paired end sequencing; Longitudinal and Diurnal Experiments of M. hapla and M. truncatula External Id SAMEA4003655 | Submitter Id E-MTAB-4724:Sample12_shoot_2_day_noinfection | organism part shoot | sample name E-MTAB-4724:Sample12_shoot_2_day_noinfection | time 2 day 0.2523 ERR1421743 Illumina Genome Analyzer IIx paired end sequencing; Longitudinal and Diurnal Experiments of M. hapla and M. truncatula External Id SAMEA4003655 | Submitter Id E-MTAB-4724:Sample12_shoot_2_day_noinfection | organism part shoot | sample name E-MTAB-4724:Sample12_shoot_2_day_noinfection | time 2 day -0.2644 ERR1421675 Illumina Genome Analyzer IIx paired end sequencing; Longitudinal and Diurnal Experiments of M. hapla and M. truncatula External Id SAMEA4003659 | Submitter Id E-MTAB-4724:Sample16_root_1_day_noinfection | organism part root | sample name E-MTAB-4724:Sample16_root_1_day_noinfection | time 1 day -0.2649 ERR1421724 Illumina Genome Analyzer IIx paired end sequencing; Longitudinal and Diurnal Experiments of M. hapla and M. truncatula External Id SAMEA4003659 | Submitter Id E-MTAB-4724:Sample16_root_1_day_noinfection | organism part root | sample name E-MTAB-4724:Sample16_root_1_day_noinfection | time 1 day -0.278 ERR1421639 Illumina Genome Analyzer IIx paired end sequencing; Longitudinal and Diurnal Experiments of M. hapla and M. truncatula External Id SAMEA4003659 | Submitter Id E-MTAB-4724:Sample16_root_1_day_noinfection | organism part root | sample name E-MTAB-4724:Sample16_root_1_day_noinfection | time 1 day 7 SRP349926 MT-EFFOR2019 loading run annotation attributes 0.2487 SRR17176056 MEDTR-PA-eBL_4_2_1 Title MEDTR-PA-eBL_4_2 | Molecule polyA_RNA | Extract_protocol qiagen PolyA 0.2464 SRR17176057 MEDTR-PA-eBL_4_2_2 Title MEDTR-PA-eBL_4_2 | Molecule polyA_RNA | Extract_protocol qiagen PolyA 0.2398 SRR17176058 MEDTR-PA-eBL_4_2_3 Title MEDTR-PA-eBL_4_2 | Molecule polyA_RNA | Extract_protocol qiagen PolyA -0.18 SRR17176070 MEDTR-RB-ABL_10_2_3-B Title MEDTR-RB-ABL_10_2_3 | Molecule total_RNA | Extract_protocol qiagen ribodepletion -0.1933 SRR17176069 MEDTR-RB-ABL_10_2_3-A Title MEDTR-RB-ABL_10_2_3 | Molecule total_RNA | Extract_protocol qiagen ribodepletion -0.1974 SRR17176052 MEDTR-PA-ABL_10_2_3 Title MEDTR-PA-ABL_10_2 | Molecule polyA_RNA | Extract_protocol qiagen PolyA 8 SRP220100 The U-box family genes in Medicago truncatula: key elements in response to salt, cold, and drought stresses loading run annotation attributes 0.224 SRR10058825 stress Salt | time 12h 0.2066 SRR10058819 stress Drought | time 2h 0.1873 SRR10058821 stress Drought | time 12h -0.183 SRR10058822 stress Salt | time 0h -0.1959 SRR10058814 stress Cold | time 0h -0.2057 SRR10058818 stress Drought | time 0h 9 ERP105151 CK dependent Rhizobium LCO induced signalling in Medicago truncatula loading run annotation attributes 0.2223 ERR2193168 Illumina HiSeq 2000 paired end sequencing; CK dependent Rhizobium LCO induced signalling in Medicago truncatula External Id SAMEA104375986 | INSDC last update 2017-11-09T15:04:29Z | Submitter Id E-MTAB-3007_2:Mtcre1 LCO WT003 | genotype Mtcre1 mutant | sample name E-MTAB-3007_2:Mtcre1 LCO WT003 | stimulus Rhizobium lipo-chitin oligosaccharide 0.2031 ERR2193160 Illumina HiSeq 2000 paired end sequencing; CK dependent Rhizobium LCO induced signalling in Medicago truncatula External Id SAMEA104375978 | INSDC last update 2017-11-09T15:04:28Z | Submitter Id E-MTAB-3007_2:A17 LCO WT001 | genotype wild type genotype | sample name E-MTAB-3007_2:A17 LCO WT001 | stimulus Rhizobium lipo-chitin oligosaccharide 0.1534 ERR2193162 Illumina HiSeq 2000 paired end sequencing; CK dependent Rhizobium LCO induced signalling in Medicago truncatula External Id SAMEA104375980 | INSDC last update 2017-11-09T15:04:28Z | Submitter Id E-MTAB-3007_2:A17 LCO WT003 | genotype wild type genotype | sample name E-MTAB-3007_2:A17 LCO WT003 | stimulus Rhizobium lipo-chitin oligosaccharide -0.1511 ERR2193164 Illumina HiSeq 2000 paired end sequencing; CK dependent Rhizobium LCO induced signalling in Medicago truncatula External Id SAMEA104375982 | INSDC last update 2017-11-09T15:04:29Z | Submitter Id E-MTAB-3007_2:A17 noLCO WT002 | genotype wild type genotype | sample name E-MTAB-3007_2:A17 noLCO WT002 -0.1723 ERR2193165 Illumina HiSeq 2000 paired end sequencing; CK dependent Rhizobium LCO induced signalling in Medicago truncatula External Id SAMEA104375983 | INSDC last update 2017-11-09T15:04:29Z | Submitter Id E-MTAB-3007_2:A17 noLCO WT003 | genotype wild type genotype | sample name E-MTAB-3007_2:A17 noLCO WT003 -0.2434 ERR2193169 Illumina HiSeq 2000 paired end sequencing; CK dependent Rhizobium LCO induced signalling in Medicago truncatula External Id SAMEA104375987 | INSDC last update 2017-11-09T15:04:29Z | Submitter Id E-MTAB-3007_2:Mtcre1 noLCO WT001 | genotype Mtcre1 mutant | sample name E-MTAB-3007_2:Mtcre1 noLCO WT001 10 ERP118927 Time-course transcriptome analysis of mature nodules in Medicago truncatula grown in split-root under different nitrogen (N) supply loading run annotation attributes 0.2149 ERR3762982 Illumina HiSeq 2500 sequencing; Time-course transcriptome analysis of mature nodules in Medicago truncatula grown in split-root under different nitrogen (N) supply External Id SAMEA6415141 | INSDC last update 2019-12-13T14:11:59Z | Submitter Id E-MTAB-8597:Control_0d_3 | growth condition control | sample name E-MTAB-8597:Control_0d_3 0.2085 ERR3762985 Illumina HiSeq 2500 sequencing; Time-course transcriptome analysis of mature nodules in Medicago truncatula grown in split-root under different nitrogen (N) supply External Id SAMEA6415144 | INSDC last update 2019-12-13T14:11:59Z | Submitter Id E-MTAB-8597:DN_1d_3 | growth condition N-limitation | sample name E-MTAB-8597:DN_1d_3 0.1707 ERR3762993 Illumina HiSeq 2500 sequencing; Time-course transcriptome analysis of mature nodules in Medicago truncatula grown in split-root under different nitrogen (N) supply External Id SAMEA6415152 | INSDC last update 2019-12-13T14:12:00Z | Submitter Id E-MTAB-8597:SN_3d_2 | growth condition N-satiety | sample name E-MTAB-8597:SN_3d_2 -0.0908 ERR3762980 Illumina HiSeq 2500 sequencing; Time-course transcriptome analysis of mature nodules in Medicago truncatula grown in split-root under different nitrogen (N) supply External Id SAMEA6415139 | INSDC last update 2019-12-13T14:11:59Z | Submitter Id E-MTAB-8597:Control_0d_1 | growth condition control | sample name E-MTAB-8597:Control_0d_1 -0.226 ERR3762987 Illumina HiSeq 2500 sequencing; Time-course transcriptome analysis of mature nodules in Medicago truncatula grown in split-root under different nitrogen (N) supply External Id SAMEA6415146 | INSDC last update 2019-12-13T14:11:59Z | Submitter Id E-MTAB-8597:DN_3d_2 | growth condition N-limitation | sample name E-MTAB-8597:DN_3d_2 -0.2309 ERR3762986 Illumina HiSeq 2500 sequencing; Time-course transcriptome analysis of mature nodules in Medicago truncatula grown in split-root under different nitrogen (N) supply External Id SAMEA6415145 | INSDC last update 2019-12-13T14:11:59Z | Submitter Id E-MTAB-8597:DN_3d_1 | growth condition N-limitation | sample name E-MTAB-8597:DN_3d_1	Loading 1 SRP220100 The U-box family genes in Medicago truncatula: key elements in response to salt, cold, and drought stresses loading run annotation attributes 0.4079 SRR10058814 stress Cold | time 0h 0.2629 SRR10058817 stress Cold | time 12h 0.256 SRR10058818 stress Drought | time 0h -0.1729 SRR10058825 stress Salt | time 12h -0.3364 SRR10058824 stress Salt | time 6h -0.4008 SRR10058823 stress Salt | time 2h 2 SRP230996 Effects of arbuscular mycorrhizal fungus Rhizophagus irregularis in Medicago truncatula (wild type and SUNN mutant) loading run annotation attributes 0.4039 SRR10506585 0.3473 SRR10506584 0.2951 SRR10506588 -0.2265 SRR10506592 -0.2285 SRR10506573 -0.2618 SRR10506594 3 SRP212693 NODULE INCEPTION recruits the lateral root developmental program for symbiotic nodule organogenesis loading run annotation attributes 0.3299 SRR9623339 time 36h of lateral root initiation | treatments turned 135° for 12 hours 0.3137 SRR9623325 time 12h of lateral root initiation | treatments turned 135° for 12 hours 0.3137 SRR9623322 time 12h of lateral root initiation | treatments no treatment -0.3151 SRR9623201 time 16h | treatments Sinorhizobium meliloti strain 2011 -0.3399 SRR9623202 time 16h | treatments Sinorhizobium meliloti strain 2011 -0.3435 SRR9623192 time 14h | treatments Sinorhizobium meliloti strain 2011 4 SRP359760 Medicago truncatula seedling treatment with Pythium oligandrum oospores within in-vitro system. loading run annotation attributes 0.3091 SRR18015529 treatment group A17 (Control) | time point 3 days post treatment | replicate Biological replicate 4 0.2495 SRR18015518 treatment group A17 (Control) | time point 5 days post treatment | replicate Biological replicate 3 0.2399 SRR18015531 treatment group A17 (Control) | time point 3 days post treatment | replicate Biological replicate 2 -0.3328 SRR18015500 treatment group P. oligandrum | time point 7 days post treatment | replicate Biological replicate 3 -0.3408 SRR18015501 treatment group P. oligandrum | time point 7 days post treatment | replicate Biological replicate 2 -0.3423 SRR18015497 treatment group P. oligandrum | time point 7 days post treatment | replicate Biological replicate 6 5 SRP098557 Ethylene signaling is important for isoflavonoid mediated resistance to Rhizoctonia solani in roots of Medicago truncatula loading run annotation attributes 0.2828 SRR5217262 plant genotype A17 (wild type) | days after infection/mock treatment 2 days | disease phenotype moderately resistant to R. solani AG8 0.2344 SRR5217263 plant genotype A17 (wild type) | days after infection/mock treatment 2 days | disease phenotype moderately resistant to R. solani AG8 0.2052 SRR5217274 plant genotype sickle mutant (ethylene insensitive, point mutation in A17) | days after infection/mock treatment 2 days | disease phenotype Highly susceptible to R. solani AG8 -0.1951 SRR5217283 plant genotype sickle mutant (ethylene insensitive, point mutation in A17) | days after infection/mock treatment 7 days | disease phenotype Highly susceptible to R. solani AG8 -0.2135 SRR5217281 plant genotype sickle mutant (ethylene insensitive, point mutation in A17) | days after infection/mock treatment 7 days | disease phenotype Highly susceptible to R. solani AG8 -0.2871 SRR5217285 plant genotype sickle mutant (ethylene insensitive, point mutation in A17) | days after infection/mock treatment 7 days | disease phenotype Highly susceptible to R. solani AG8 6 SRP077692 Medicago truncatula Transcriptome or Gene expression loading run annotation attributes 0.281 SRR3735562 ecotype HM340 | treatment Inoculated by Sinorhizobium medicae (WSM419) 0.2787 SRR3735563 ecotype HM340 | treatment Inoculated by Sinorhizobium medicae (WSM419) 0.2346 SRR3735564 ecotype HM340 | treatment Inoculated by Sinorhizobium medicae (WSM419) -0.259 SRR3735553 ecotype HM056 | treatment Inoculated by Sinorhizobium medicae (WSM419) -0.2888 SRR3735549 ecotype HM056 | treatment Inoculated by Sinorhizobium meliloti (KH46c) -0.3121 SRR3735548 ecotype HM056 | treatment Inoculated by Sinorhizobium meliloti (KH46c) 7 SRP043103 Medicago truncatula Transcriptome or Gene expression loading run annotation attributes 0.2726 SRR1377066 Mt_DMI3_MYCS_10-6M_2H+4H_R3 cultivar A17 | treatment sulphated (S) Myc-LCOs at 10-6M | age missing 0.2407 SRR1377072 Mt_DMI3_ACN_2H+4H_R3 cultivar A17 | genotype dmi3-1 | treatment acetonitril solvent | age missing 0.212 SRR1377077 Mt_A17_ACN_2H+4H_R2 cultivar Jemalong A17 | age 4 day old | genotype A17 (wild type) | growth_protocol control (acetonitrile solvent) -0.1754 SRR1377080 Mt_A17_MYCS_10-6M_2H+4H_R2 cultivar Jemalong A17 | age 4 day old | genotype A17 (wild type) | treatment sulphated (S) Myc-LCOs at 10-6M -0.1761 SRR1377063 Mt_NSP1_ACN_2H+4H_R3 cultivar A17 | treatment acetonitril solvent | genotype nsp1-1 | age missing -0.2076 SRR1377079 Mt_A17_MYCS_10-6M_2H+4H_R1 cultivar Jemalong A17 | age 4 day old | genotype A17 (wild type) | treatment sulphated (S) Myc-LCOs at 10-6M 8 SRP349926 MT-EFFOR2019 loading run annotation attributes 0.2641 SRR17176052 MEDTR-PA-ABL_10_2_3 Title MEDTR-PA-ABL_10_2 | Molecule polyA_RNA | Extract_protocol qiagen PolyA 0.2586 SRR17176070 MEDTR-RB-ABL_10_2_3-B Title MEDTR-RB-ABL_10_2_3 | Molecule total_RNA | Extract_protocol qiagen ribodepletion 0.2506 SRR17176064 MEDTR-RB-eBL_10_2_1-B Title MEDTR-RB-eBL_10_2_1 | Molecule total_RNA | Extract_protocol qiagen ribodepletion -0.3684 SRR17176058 MEDTR-PA-eBL_4_2_3 Title MEDTR-PA-eBL_4_2 | Molecule polyA_RNA | Extract_protocol qiagen PolyA -0.3763 SRR17176057 MEDTR-PA-eBL_4_2_2 Title MEDTR-PA-eBL_4_2 | Molecule polyA_RNA | Extract_protocol qiagen PolyA -0.4377 SRR17176056 MEDTR-PA-eBL_4_2_1 Title MEDTR-PA-eBL_4_2 | Molecule polyA_RNA | Extract_protocol qiagen PolyA 9 SRP323948 Processing of NODULE INCEPTION controls transition to nitrogen fixation in root nodules loading run annotation attributes 0.2259 SRR14804670 source_name regenerated root structure | genoytpe wild type ecotype jemalong A17 cultivar Jester transformed with pLjUBI:NIN | treatment no treatment 0.2247 SRR14804667 source_name regenerated root structure | genoytpe wild type ecotype jemalong A17 cultivar Jester transformed with pLjUBI:NIN | treatment no treatment 0.2237 SRR14804666 source_name regenerated root structure | genoytpe wild type ecotype jemalong A17 cultivar Jester transformed with pLjUBI:NIN | treatment no treatment -0.2993 SRR14804680 source_name root nodule | genoytpe dnf1-2 mutant in A17 wild type background | treatment Sinorhizobium meliloti -0.3696 SRR14804677 source_name root nodule | genoytpe dnf1-2 mutant in A17 wild type background | treatment Sinorhizobium meliloti -0.4047 SRR14804678 source_name root nodule | genoytpe dnf1-2 mutant in A17 wild type background | treatment Sinorhizobium meliloti 10 SRP018396 Medicago truncatula strain:Jemalong A17/J5 Transcriptome or Gene expression loading run annotation attributes 0.2237 SRR670346 cultivar Jemalong A17 | genotype wt 0.2124 SRR670349 cultivar Jemalong A17 | genotype wt 0.2005 SRR670347 cultivar Jemalong A17 | genotype wt -0.1522 SRR670353 cultivar Jemalong A17 | genotype nfp (C31) -0.1779 SRR670404 cultivar Jemalong J5 | genotype dmi3 (TRV25) -0.249 SRR670348 cultivar Jemalong A17 | genotype wt	Loading 1 SRP212693 NODULE INCEPTION recruits the lateral root developmental program for symbiotic nodule organogenesis loading run annotation attributes 0.354 SRR9623218 time 36h | treatments mock 0.3443 SRR9623219 time 36h | treatments mock 0.3304 SRR9623226 time 48h | treatments mock -0.3596 SRR9623349 time 48h of lateral root initiation | treatments turned 135° for 12 hours -0.3611 SRR9623348 time 48h of lateral root initiation | treatments turned 135° for 12 hours -0.3969 SRR9623327 time 24h of lateral root initiation | treatments no treatment 2 SRP018396 Medicago truncatula strain:Jemalong A17/J5 Transcriptome or Gene expression loading run annotation attributes 0.3209 SRR670352 cultivar Jemalong A17 | genotype nfp (C31) 0.1968 SRR670356 cultivar Jemalong A17 | genotype nfp (C31) 0.1716 SRR670353 cultivar Jemalong A17 | genotype nfp (C31) -0.2374 SRR670383 cultivar Jemalong J5 | genotype dmi3 (TRV25) -0.2636 SRR670358 cultivar Jemalong J5 | genotype dmi3 (TRV25) -0.2845 SRR670400 cultivar Jemalong J5 | genotype dmi3 (TRV25) 3 SRP359760 Medicago truncatula seedling treatment with Pythium oligandrum oospores within in-vitro system. loading run annotation attributes 0.2734 SRR18015506 treatment group A17 (Control) | time point 7 days post treatment | replicate Biological replicate 3 0.1979 SRR18015518 treatment group A17 (Control) | time point 5 days post treatment | replicate Biological replicate 3 0.1854 SRR18015496 treatment group A17 (Control) | time point 14 days post treatment | replicate Biological replicate 1 -0.1692 SRR18015494 treatment group A17 (Control) | time point 14 days post treatment | replicate Biological replicate 3 -0.2233 SRR18015522 treatment group P. oligandrum | time point 3 days post treatment | replicate Biological replicate 5 -0.2424 SRR18015498 treatment group P. oligandrum | time point 7 days post treatment | replicate Biological replicate 5 4 SRP077692 Medicago truncatula Transcriptome or Gene expression loading run annotation attributes 0.2584 SRR3735583 ecotype HM101 | tissue root | treatment Uninoculated 0.2558 SRR3735584 ecotype HM101 | tissue root | treatment Uninoculated 0.225 SRR3735575 ecotype HM034 | tissue nodule | treatment Inoculated by Sinorhizobium medicae (WSM419) -0.1809 SRR3735573 ecotype HM101 | tissue nodule | treatment Inoculated by Sinorhizobium medicae (WSM419) -0.2 SRR3735546 ecotype HM101 | tissue nodule | treatment Inoculated by Sinorhizobium meliloti (KH46c) -0.2223 SRR3735545 ecotype HM101 | tissue nodule | treatment Inoculated by Sinorhizobium meliloti (KH46c) 5 SRP349926 MT-EFFOR2019 loading run annotation attributes 0.2508 SRR17176032 MEDTR-RB-e2011_10_1-B Title MEDTR-RB-e2011_10_1 | Molecule total_RNA | Extract_protocol qiagen ribodepletion | Other_organism Sinorhizobium meliloti 2011 taxid=1286640 0.243 SRR17176031 MEDTR-RB-e2011_10_1-A Title MEDTR-RB-e2011_10_1 | Molecule total_RNA | Extract_protocol qiagen ribodepletion | Other_organism Sinorhizobium meliloti 2011 taxid=1286640 0.2422 SRR17176059 MEDTR-RB-eBL_10_2_2-A Title MEDTR-RB-eBL_10_2_2 | Molecule total_RNA | Extract_protocol qiagen ribodepletion | Other_organism Sinorhizobium meliloti BL255C taxid=698936 -0.358 SRR17176048 MEDTR-PA-ABL_4_2_2 Title MEDTR-PA-ABL_4_2 | Molecule polyA_RNA | Extract_protocol qiagen PolyA | Other_organism Sinorhizobium meliloti BL255C taxid=698936 -0.3633 SRR17176047 MEDTR-PA-ABL_4_2_1 Title MEDTR-PA-ABL_4_2 | Molecule polyA_RNA | Extract_protocol qiagen PolyA | Other_organism Sinorhizobium meliloti BL255C taxid=698936 -0.4158 SRR17176076 MEDTR-PA-e2011_4_3 Title MEDTR-PA-e2011_4 | Molecule polyA_RNA | Extract_protocol qiagen PolyA | Other_organism Sinorhizobium meliloti 2011 taxid=1286640 6 SRP349933 MT-DCRISPR2021-NODULES loading run annotation attributes 0.2366 SRR17176355 A17_4DPI_2-A Title A17_4DPI_2 | Other_organism Sinorhizobium meliloti 2011 taxid=1286640 0.2268 SRR17176356 A17_4DPI_2-B Title A17_4DPI_2 | Other_organism Sinorhizobium meliloti 2011 taxid=1286640 0.225 SRR17176359 A17_4DPI_3-A Title A17_4DPI_3 | Other_organism Sinorhizobium meliloti 2011 taxid=1286640 -0.1525 SRR17176346 A17_NOD_CRISPR_DRM_1-B Title A17_NOD_CRISPR_DRM_1 | Other_organism Sinorhizobium meliloti -0.243 SRR17176344 A17_NOD_CRISPR_GUS_3-B Title A17_NOD_CRISPR_GUS_3 | Other_organism Sinorhizobium meliloti -0.2477 SRR17176343 A17_NOD_CRISPR_GUS_3-A Title A17_NOD_CRISPR_GUS_3 | Other_organism Sinorhizobium meliloti 7 SRP098557 Ethylene signaling is important for isoflavonoid mediated resistance to Rhizoctonia solani in roots of Medicago truncatula loading run annotation attributes 0.2102 SRR5217269 days after infection/mock treatment 7 days 0.1822 SRR5217270 days after infection/mock treatment 7 days 0.1374 SRR5217272 days after infection/mock treatment 7 days -0.1327 SRR5217265 days after infection/mock treatment 2 days -0.1452 SRR5217266 days after infection/mock treatment 2 days -0.228 SRR5217267 days after infection/mock treatment 2 days 8 SRP043103 Medicago truncatula Transcriptome or Gene expression loading run annotation attributes 0.198 SRR1377061 Mt_NSP1_ACN_2H+4H_R1 cultivar A17 | treatment acetonitril solvent | genotype nsp1-1 | age missing 0.1789 SRR1377067 Mt_DMI3_MYCNS_10-6M_2H+4H_R1 cultivar A17 | treatment non sulphated Myc LCO at 10-6M | age missing 0.1749 SRR1377076 Mt_A17_ACN_2H+4H_R1 cultivar Jemalong A17 | age 4 day old | genotype A17 (wild type) | growth_protocol control (acetonitrile solvent) -0.1398 SRR1377057 Mt_NSP1_MYCS_10-6M_2H+4H_R3 cultivar A17 | genotype nsp1 | treatment sulphated (S) Myc-LCOs at 10-6M | age missing -0.1551 SRR1377056 Mt_NSP1_MYCS_10-6M_2H+4H_R2 cultivar A17 | genotype nsp1 | treatment sulphated (S) Myc-LCOs at 10-6M | age missing -0.2585 SRR1377059 Mt_NSP1_MYCNS_10-6M_2H+4H_R2 cultivar A17 | genotype nsp1-1 | treatment non sulphated Myc LCO at 10-6M | age missing 9 ERP118927 Time-course transcriptome analysis of mature nodules in Medicago truncatula grown in split-root under different nitrogen (N) supply loading run annotation attributes 0.1958 ERR3762980 Illumina HiSeq 2500 sequencing; Time-course transcriptome analysis of mature nodules in Medicago truncatula grown in split-root under different nitrogen (N) supply External Id SAMEA6415139 | INSDC last update 2019-12-13T14:11:59Z | Submitter Id E-MTAB-8597:Control_0d_1 | growth condition control | sample name E-MTAB-8597:Control_0d_1 0.1746 ERR3762984 Illumina HiSeq 2500 sequencing; Time-course transcriptome analysis of mature nodules in Medicago truncatula grown in split-root under different nitrogen (N) supply External Id SAMEA6415143 | INSDC last update 2019-12-13T14:11:59Z | Submitter Id E-MTAB-8597:DN_1d_2 | growth condition N-limitation | sample name E-MTAB-8597:DN_1d_2 0.1346 ERR3762986 Illumina HiSeq 2500 sequencing; Time-course transcriptome analysis of mature nodules in Medicago truncatula grown in split-root under different nitrogen (N) supply External Id SAMEA6415145 | INSDC last update 2019-12-13T14:11:59Z | Submitter Id E-MTAB-8597:DN_3d_1 | growth condition N-limitation | sample name E-MTAB-8597:DN_3d_1 -0.1768 ERR3762993 Illumina HiSeq 2500 sequencing; Time-course transcriptome analysis of mature nodules in Medicago truncatula grown in split-root under different nitrogen (N) supply External Id SAMEA6415152 | INSDC last update 2019-12-13T14:12:00Z | Submitter Id E-MTAB-8597:SN_3d_2 | growth condition N-satiety | sample name E-MTAB-8597:SN_3d_2 -0.1844 ERR3762992 Illumina HiSeq 2500 sequencing; Time-course transcriptome analysis of mature nodules in Medicago truncatula grown in split-root under different nitrogen (N) supply External Id SAMEA6415151 | INSDC last update 2019-12-13T14:12:00Z | Submitter Id E-MTAB-8597:SN_3d_1 | growth condition N-satiety | sample name E-MTAB-8597:SN_3d_1 -0.2427 ERR3762994 Illumina HiSeq 2500 sequencing; Time-course transcriptome analysis of mature nodules in Medicago truncatula grown in split-root under different nitrogen (N) supply External Id SAMEA6415153 | INSDC last update 2019-12-13T14:12:00Z | Submitter Id E-MTAB-8597:SN_3d_3 | growth condition N-satiety | sample name E-MTAB-8597:SN_3d_3 10 SRP158577 The transcriptomic response to a short day to long day shift in the reference legume Medicago truncatula loading run annotation attributes 0.1944 SRR7738224 source_name LD_ZT4, 2 trifoliate leaves | age 15 days | condition Shifted to LD | timepoint ZT4 0.1762 SRR7738225 source_name LD_ZT4, 2 trifoliate leaves | age 15 days | condition Shifted to LD | timepoint ZT4 0.1517 SRR7738221 source_name LD_ZT2, 2 trifoliate leaves | age 13 days | condition Shifted to LD | timepoint ZT2 -0.1459 SRR7738213 source_name SD_ZT0, 2 trifoliate leaves | age 13 days | condition SD | timepoint ZT0 -0.1503 SRR7738218 source_name LD_ZT0, 2 trifoliate leaves | age 13 days | condition Shifted to LD | timepoint ZT0 -0.2273 SRR7738211 source_name SD_ZT0, 2 trifoliate leaves | age 13 days | condition SD | timepoint ZT0	Loading 1 SRP359760 Medicago truncatula seedling treatment with Pythium oligandrum oospores within in-vitro system. loading run annotation attributes 0.3923 SRR18015508 treatment group A17 (Control) | time point 7 days post treatment | replicate Biological replicate 1 0.3535 SRR18015501 treatment group P. oligandrum | time point 7 days post treatment | replicate Biological replicate 2 0.2842 SRR18015502 treatment group P. oligandrum | time point 7 days post treatment | replicate Biological replicate 1 -0.4547 SRR18015525 treatment group P. oligandrum | time point 3 days post treatment | replicate Biological replicate 2 -0.4694 SRR18015524 treatment group P. oligandrum | time point 3 days post treatment | replicate Biological replicate 3 -0.4775 SRR18015521 treatment group P. oligandrum | time point 3 days post treatment | replicate Biological replicate 6 2 SRP212693 NODULE INCEPTION recruits the lateral root developmental program for symbiotic nodule organogenesis loading run annotation attributes 0.3535 SRR9623345 source_name 2-3mm segment of root | time 48h of lateral root initiation | tissue 2-3mm segment of root | genotype wild type ecotype jemalong cultivar Jester 0.3307 SRR9623328 source_name 2-3mm segment of root | time 24h of lateral root initiation | tissue 2-3mm segment of root | genotype wild type ecotype jemalong cultivar Jester 0.3206 SRR9623327 source_name 2-3mm segment of root | time 24h of lateral root initiation | tissue 2-3mm segment of root | genotype wild type ecotype jemalong cultivar Jester -0.3337 SRR9623370 source_name regenerated root structure | tissue regenerated root structure | genotype wild type ecotype jemalong cultivar Jester transformed with pLjUBI:LBD16 -0.3397 SRR9623372 source_name regenerated root structure | tissue regenerated root structure | genotype wild type ecotype jemalong cultivar Jester transformed with pLjUBI:LBD11 -0.3516 SRR9623373 source_name regenerated root structure | tissue regenerated root structure | genotype wild type ecotype jemalong cultivar Jester transformed with pLjUBI:LBD11 3 SRP098557 Ethylene signaling is important for isoflavonoid mediated resistance to Rhizoctonia solani in roots of Medicago truncatula loading run annotation attributes 0.2584 SRR5217265 plant genotype A17 (wild type) | days after infection/mock treatment 2 days | disease phenotype moderately resistant to R. solani AG8 0.2401 SRR5217264 plant genotype A17 (wild type) | days after infection/mock treatment 2 days | disease phenotype moderately resistant to R. solani AG8 0.2264 SRR5217263 plant genotype A17 (wild type) | days after infection/mock treatment 2 days | disease phenotype moderately resistant to R. solani AG8 -0.2325 SRR5217270 plant genotype A17 (wild type) | days after infection/mock treatment 7 days | disease phenotype moderately resistant to R. solani AG8 -0.2386 SRR5217268 plant genotype A17 (wild type) | days after infection/mock treatment 7 days | disease phenotype moderately resistant to R. solani AG8 -0.3105 SRR5217282 plant genotype sickle mutant (ethylene insensitive, point mutation in A17) | days after infection/mock treatment 7 days | disease phenotype Highly susceptible to R. solani AG8 4 ERP118927 Time-course transcriptome analysis of mature nodules in Medicago truncatula grown in split-root under different nitrogen (N) supply loading run annotation attributes 0.2328 ERR3762985 Illumina HiSeq 2500 sequencing; Time-course transcriptome analysis of mature nodules in Medicago truncatula grown in split-root under different nitrogen (N) supply External Id SAMEA6415144 | INSDC last update 2019-12-13T14:11:59Z | Submitter Id E-MTAB-8597:DN_1d_3 | growth condition N-limitation | sample name E-MTAB-8597:DN_1d_3 0.1931 ERR3762983 Illumina HiSeq 2500 sequencing; Time-course transcriptome analysis of mature nodules in Medicago truncatula grown in split-root under different nitrogen (N) supply External Id SAMEA6415142 | INSDC last update 2019-12-13T14:11:59Z | Submitter Id E-MTAB-8597:DN_1d_1 | growth condition N-limitation | sample name E-MTAB-8597:DN_1d_1 0.1219 ERR3762984 Illumina HiSeq 2500 sequencing; Time-course transcriptome analysis of mature nodules in Medicago truncatula grown in split-root under different nitrogen (N) supply External Id SAMEA6415143 | INSDC last update 2019-12-13T14:11:59Z | Submitter Id E-MTAB-8597:DN_1d_2 | growth condition N-limitation | sample name E-MTAB-8597:DN_1d_2 -0.0959 ERR3762992 Illumina HiSeq 2500 sequencing; Time-course transcriptome analysis of mature nodules in Medicago truncatula grown in split-root under different nitrogen (N) supply External Id SAMEA6415151 | INSDC last update 2019-12-13T14:12:00Z | Submitter Id E-MTAB-8597:SN_3d_1 | growth condition N-satiety | sample name E-MTAB-8597:SN_3d_1 -0.1271 ERR3762994 Illumina HiSeq 2500 sequencing; Time-course transcriptome analysis of mature nodules in Medicago truncatula grown in split-root under different nitrogen (N) supply External Id SAMEA6415153 | INSDC last update 2019-12-13T14:12:00Z | Submitter Id E-MTAB-8597:SN_3d_3 | growth condition N-satiety | sample name E-MTAB-8597:SN_3d_3 -0.2952 ERR3762986 Illumina HiSeq 2500 sequencing; Time-course transcriptome analysis of mature nodules in Medicago truncatula grown in split-root under different nitrogen (N) supply External Id SAMEA6415145 | INSDC last update 2019-12-13T14:11:59Z | Submitter Id E-MTAB-8597:DN_3d_1 | growth condition N-limitation | sample name E-MTAB-8597:DN_3d_1 5 SRP220100 The U-box family genes in Medicago truncatula: key elements in response to salt, cold, and drought stresses loading run annotation attributes 0.2274 SRR10058815 stress Cold | time 2h 0.1666 SRR10058814 stress Cold | time 0h 0.1589 SRR10058816 stress Cold | time 6h -0.2312 SRR10058824 stress Salt | time 6h -0.2354 SRR10058820 stress Drought | time 6h -0.2747 SRR10058821 stress Drought | time 12h 6 SRP323948 Processing of NODULE INCEPTION controls transition to nitrogen fixation in root nodules loading run annotation attributes 0.2274 SRR14804674 source_name root nodule | genoytpe wild type ecotype jemalong A17 | treatment Sinorhizobium meliloti 0.1699 SRR14804673 source_name root nodule | genoytpe wild type ecotype jemalong A17 | treatment Sinorhizobium meliloti 0.169 SRR14804675 source_name root nodule | genoytpe wild type ecotype jemalong A17 | treatment Sinorhizobium meliloti -0.1987 SRR14804671 source_name regenerated root structure | genoytpe wild type ecotype jemalong A17 cultivar Jester transformed with pLjUBI:NIN | treatment no treatment -0.2108 SRR14804670 source_name regenerated root structure | genoytpe wild type ecotype jemalong A17 cultivar Jester transformed with pLjUBI:NIN | treatment no treatment -0.2206 SRR14804666 source_name regenerated root structure | genoytpe wild type ecotype jemalong A17 cultivar Jester transformed with pLjUBI:NIN | treatment no treatment 7 SRP043103 Medicago truncatula Transcriptome or Gene expression loading run annotation attributes 0.214 SRR1377069 Mt_DMI3_MYCNS_10-6M_2H+4H_R3 cultivar A17 | treatment non sulphated Myc LCO at 10-6M | age missing 0.1763 SRR1377071 Mt_DMI3_ACN_2H+4H_R2 cultivar A17 | genotype dmi3-1 | treatment acetonitril solvent | age missing 0.1682 SRR1377078 Mt_A17_ACN_2H+4H_R3 cultivar Jemalong A17 | age 4 day old | genotype A17 (wild type) | growth_protocol control (acetonitrile solvent) -0.144 SRR1377065 Mt_DMI3_MYCS_10-6M_2H+4H_R2 cultivar A17 | treatment sulphated (S) Myc-LCOs at 10-6M | age missing -0.1489 SRR1377076 Mt_A17_ACN_2H+4H_R1 cultivar Jemalong A17 | age 4 day old | genotype A17 (wild type) | growth_protocol control (acetonitrile solvent) -0.2568 SRR1377073 Mt_A17_MYCNS_10-6M_2H+4H_R1 cultivar A17 | treatment non sulphated Myc LCO at 10-6M | age missing 8 SRP077692 Medicago truncatula Transcriptome or Gene expression loading run annotation attributes 0.2107 SRR3735548 ecotype HM056 | tissue nodule | treatment Inoculated by Sinorhizobium meliloti (KH46c) 0.2008 SRR3735549 ecotype HM056 | tissue nodule | treatment Inoculated by Sinorhizobium meliloti (KH46c) 0.1899 SRR3735571 ecotype HM034 | tissue nodule | treatment Inoculated by Sinorhizobium meliloti (KH46c) -0.1367 SRR3735578 ecotype HM034 | tissue root | treatment Uninoculated -0.1423 SRR3735577 ecotype HM034 | tissue root | treatment Uninoculated -0.1617 SRR3735579 ecotype HM034 | tissue root | treatment Uninoculated 9 SRP018396 Medicago truncatula strain:Jemalong A17/J5 Transcriptome or Gene expression loading run annotation attributes 0.1819 SRR670347 cultivar Jemalong A17 | genotype wt 0.1082 SRR670345 cultivar Jemalong A17 | genotype wt 0.0642 SRR670346 cultivar Jemalong A17 | genotype wt -0.1127 SRR670356 cultivar Jemalong A17 | genotype nfp (C31) -0.1206 SRR670404 cultivar Jemalong J5 | genotype dmi3 (TRV25) -0.1283 SRR670358 cultivar Jemalong J5 | genotype dmi3 (TRV25) 10 SRP229031 ACHILLEUS-RNASEQ loading run annotation attributes 0.1651 SRR10416793 MEDTR-2dpi-ROOT-Rs-M3-A Title MEDTR-2dpi-ROOT-Rs-M3 0.1639 SRR10416748 MEDTR-1dpi-ROOT-M3-B Title MEDTR-1dpi-ROOT-M3 0.1638 SRR10416747 MEDTR-1dpi-ROOT-M3-A Title MEDTR-1dpi-ROOT-M3 -0.1322 SRR10416772 MEDTR-2dpi-NOD-Rs-M4-B Title MEDTR-2dpi-NOD-Rs-M4 -0.139 SRR10416775 MEDTR-1dpi-NOD-M4-A Title MEDTR-1dpi-NOD-M4 -0.1516 SRR10416776 MEDTR-1dpi-NOD-M4-B Title MEDTR-1dpi-NOD-M4
Upper 100 Genes Symbol Function* Entrez Gene ID* Other ID PC LOC11410042 uncharacterized LOC11410042 11410042 MTR_4g059630 56.34 LOC25502900 L-ascorbate oxidase homolog 25502900 MTR_8g479380 55.90 LOC11419921 auxin-binding protein ABP19b 11419921 MTR_8g020610 55.11 LOC112417068 uncharacterized LOC112417068 112417068 53.81 LOC11413598 uncharacterized LOC11413598 11413598 MTR_4g059670 53.09 LOC25483614 probable pectinesterase/pectinesterase inhibitor 7 25483614 MTR_1g054880 52.94 LOC11442920 fasciclin-like arabinogalactan protein 11 11442920 MTR_2g017950 52.51 LOC11413997 fasciclin-like arabinogalactan protein 12 11413997 MTR_2g093970 52.29 LOC11434140 albumin-2 11434140 MTR_1g066530 52.13 LOC11405486 peroxidase 10 11405486 MTR_5g017860 51.62 LOC11436357 protein CENTRORADIALIS-like 11436357 MTR_7g104460 51.61 LOC11419467 peroxidase A2 11419467 MTR_7g093370 51.25 LOC11409765 1-aminocyclopropane-1-carboxylate oxidase homolog 1 11409765 MTR_2g069300 50.95 LOC11413855 peroxidase A2 11413855 MTR_2g029910 50.09 LOC25498392 albumin-1 D 25498392 MTR_7g056817 50.06 LOC25492599 DNA damage-repair/toleration protein DRT100 25492599 MTR_4g065850 49.81 LOC11440205 14 kDa proline-rich protein DC2.15 11440205 MTR_4g108150 49.75 LOC11408730 fasciclin-like arabinogalactan protein 11 11408730 MTR_4g059780 49.69 LOC25487914 probable peroxidase 26 25487914 MTR_2g099175 49.65 LOC11410708 cellulose synthase A catalytic subunit 7 [UDP-forming] 11410708 MTR_8g063270 49.32 LOC11415340 probable caffeine synthase MTL2 11415340 MTR_3g117060 49.06 LOC25494999 uncharacterized LOC25494999 25494999 MTR_5g030310 48.95 LOC25487054 nicotianamine synthase 25487054 MTR_2g070310 48.47 LOC25486919 terpene synthase 10 25486919 MTR_2g064425 48.36 LOC11427657 copper transporter 6 11427657 MTR_4g065660 48.26 LOC11406450 fasciclin-like arabinogalactan protein 12 11406450 MTR_4g059790 48.26 LOC11431564 probable polygalacturonase At1g80170 11431564 MTR_2g103650 48.20 LOC11417621 protein DOWNSTREAM OF FLC 11417621 MTR_3g087540 48.15 LOC11420316 probable glucan 1,3-beta-glucosidase A 11420316 MTR_3g009010 48.06 LOC11438309 fasciclin-like arabinogalactan protein 12 11438309 MTR_2g017960 48.01 LOC25499574 uncharacterized LOC25499574 25499574 MTR_7g107500 47.98 LOC25485345 endo-1,4-beta-xylanase 5-like 25485345 MTR_1g106200 47.81 LOC11445857 fasciclin-like arabinogalactan protein 12 11445857 MTR_2g017970 47.61 LOC25501131 probable pectinesterase/pectinesterase inhibitor 47 25501131 MTR_8g042910 47.54 LOC25498365 uncharacterized LOC25498365 25498365 MTR_7g056667 47.27 LOC11416981 probable O-methyltransferase 3 11416981 MTR_5g074580 46.91 LOC11422393 pectinesterase 11422393 MTR_3g008640 46.44 LOC11418421 protein ZINC INDUCED FACILITATOR-LIKE 1 11418421 MTR_3g010850 46.19 LOC25492744 BURP domain-containing protein 9 25492744 MTR_4g069550 46.09 LOC11411833 embryonic abundant protein VF30.1 11411833 MTR_8g045890 45.97 LOC11413892 extensin-2 11413892 MTR_1g088110 45.97 LOC25483227 amino acid transporter AVT1C 25483227 MTR_1g050325 45.93 LOC11410524 pectinesterase 11410524 MTR_3g008720 45.85 LOC25502704 protein FEZ 25502704 MTR_8g467490 45.63 LOC25500851 ferric reduction oxidase 2 25500851 MTR_8g028780 45.62 LOC11434665 hevamine-A 11434665 MTR_7g116850 45.55 LOC11425078 germin-like protein subfamily 1 member 16 11425078 MTR_1g079490 45.47 LOC11437899 cytochrome P450 71D8 11437899 MTR_4g133750 45.44 LOC11429994 uncharacterized LOC11429994 11429994 MTR_5g093430 45.29 LOC25489717 stilbene synthase 4 25489717 MTR_3g088675 45.20 LOC11434807 uncharacterized LOC11434807 11434807 MTR_7g017380 45.16 LOC25490911 protein PSY1 25490911 MTR_3g464390 44.97 LOC112421167 BURP domain-containing protein 2-like 112421167 44.92 LOC25495425 UDP-arabinopyranose mutase 1 25495425 MTR_6g015905 44.73 LOC25501502 proline-rich extensin-like protein EPR1 25501502 MTR_8g069925 44.69 LOC11446164 uncharacterized LOC11446164 11446164 MTR_4g039740 44.58 LOC25484815 uncharacterized LOC25484815 25484815 MTR_1g090683 44.50 LOC25486307 uncharacterized LOC25486307 25486307 MTR_2g030835 44.50 LOC25480075 cytochrome P450 71D11 25480075 MTR_0059s0170 44.36 LOC25488202 peroxidase 7 25488202 MTR_2g437770 44.31 LOC11423379 uncharacterized LOC11423379 11423379 MTR_3g109280 44.12 LOC11419739 ferric reduction oxidase 4 11419739 MTR_1g100150 44.10 LOC25484218 cellulose synthase A catalytic subunit 4 [UDP-forming] 25484218 MTR_1g069605 44.10 LOC25488436 COBRA-like protein 4 25488436 MTR_2g462000 43.87 LOC11432698 metal tolerance protein 10 11432698 MTR_3g080090 43.73 LOC25487110 probable disease resistance protein At4g27220 25487110 MTR_2g071860 43.71 LOC25486139 uncharacterized LOC25486139 25486139 MTR_2g022960 43.65 LOC11412488 uncharacterized LOC11412488 11412488 MTR_4g069810 43.63 LOC25480199 uncharacterized LOC25480199 25480199 MTR_0083s0100 43.56 LOC11422621 basic blue protein 11422621 MTR_8g088830 43.53 LOC11406534 senescence associated gene 20 11406534 MTR_5g074500 43.52 LOC25502551 uncharacterized LOC25502551 25502551 MTR_8g464300 43.50 LOC11441906 uncharacterized LOC11441906 11441906 MTR_4g039680 43.39 LOC112416104 disease resistance protein RUN1-like 112416104 43.25 LOC25492583 extensin-2 25492583 MTR_4g065107 43.16 LOC25479655 glutamate receptor 2.8 25479655 MTR_0018s0230 43.08 LOC11415872 fasciclin-like arabinogalactan protein 11 11415872 MTR_8g087460 43.06 LOC11410247 disease resistance response protein DRRG49-C 11410247 MTR_2g035120 43.00 LOC11435500 cytochrome P450 72A68-like 11435500 MTR_5g095230 42.99 LOC11411604 uncharacterized LOC11411604 11411604 MTR_3g116950 42.95 LOC25498651 laccase-7 25498651 MTR_7g065970 42.94 LOC25491835 pectinesterase inhibitor 4 25491835 MTR_4g035855 42.93 LOC11414449 AP2-like ethylene-responsive transcription factor PLT2 11414449 MTR_4g065370 42.81 LOC11424253 MLP-like protein 328 11424253 MTR_1g031640 42.77 LOC11432359 transcription factor MYB26 11432359 MTR_2g099740 42.54 LOC11412365 cationic peroxidase 1 11412365 MTR_5g074740 42.26 LOC25487513 putative phytosulfokines 6 25487513 MTR_2g084855 42.08 LOC25491632 pectinesterase 2 25491632 MTR_4g025690 42.04 LOC25491479 receptor-like protein 6 25491479 MTR_4g017710 42.03 LOC11421083 probable terpene synthase 2 11421083 MTR_6g008560 41.94 LOC25492001 stigma-specific STIG1-like protein 1 25492001 MTR_4g044463 41.92 LOC11417876 disease resistance protein RPV1 11417876 MTR_4g014320 41.91 LOC11411483 chalcone synthase 1A 11411483 MTR_3g086260 41.88 LOC11411044 leucine-rich repeat receptor-like protein kinase PXL1 11411044 MTR_1g080440 41.77 LOC11416039 2-alkenal reductase (NADP(+)-dependent) 11416039 MTR_2g088190 41.55 LOC11432328 putative receptor protein kinase ZmPK1 11432328 MTR_3g102450 41.38 LOC11405289 protein IWS1 homolog 11405289 MTR_3g034610 41.26 LOC11417231 expansin-A11 11417231 MTR_1g026020 41.12 LOC11439650 plasma membrane ATPase 4 11439650 MTR_2g036650 41.10 LOC25480086 chitinase 2 25480086 MTR_0062s0020 41.08	Upper 100 Genes Symbol Function* Entrez Gene ID* Other ID PC LOC11445848 probable purine permease 11 11445848 MTR_2g015470 59.35 LOC25480242 uncharacterized LOC25480242 25480242 58.99 LOC11409729 protein NRT1/ PTR FAMILY 5.6 11409729 MTR_3g069420 58.35 LOC25484847 leghemoglobin 29 25484847 MTR_1g090820 57.80 LOC25483934 protein fluG 25483934 MTR_1g062710 54.34 LOC25479633 uncharacterized LOC25479633 25479633 54.28 LOC11423715 calmodulin 11423715 MTR_3g055520 52.40 LOC11407219 transcription factor bHLH25 11407219 MTR_4g092700 51.83 LOC25482476 esterase 25482476 MTR_1g030275 51.65 LOC11417934 kinesin-like protein KIN-7G 11417934 MTR_8g076190 51.38 LOC11408568 probable serine/threonine protein kinase IRE 11408568 MTR_5g069000 50.70 LOC11413600 uncharacterized LOC11413600 11413600 49.53 LOC25487010 uncharacterized protein DDB_G0290685 25487010 MTR_2g069273 49.42 LOC25495170 CASP-like protein N24 25495170 MTR_6g007160 49.35 LOC11425678 uncharacterized LOC11425678 11425678 MTR_7g114880 49.26 LOC11435082 nuclear transcription factor Y subunit A-10 11435082 MTR_1g056530 49.23 LOC11408002 zinc finger protein BALDIBIS 11408002 MTR_4g059870 49.04 LOC112416235 uncharacterized LOC112416235 112416235 48.86 LOC11429398 thiosulfate sulfurtransferase 18 11429398 MTR_5g022390 48.83 LOC112417957 uncharacterized LOC112417957 112417957 48.78 LOC25481907 wall-associated receptor kinase 5 25481907 MTR_1g010220 48.62 LOC11424740 F-box/kelch-repeat protein At3g06240 11424740 MTR_2g066200 48.61 LOC11434651 protein IQ-DOMAIN 14 11434651 MTR_7g114870 48.51 LOC25489059 calmodulin 25489059 MTR_3g055585 48.47 LOC11433129 ureide permease 1 11433129 MTR_5g045530 47.95 LOC120579692 uncharacterized LOC120579692 120579692 47.92 LOC11446764 protein NRT1/ PTR FAMILY 7.1 11446764 MTR_1g116930 47.90 LOC11440520 calmodulin 11440520 MTR_3g055570 47.85 LOC25479643 (R,S)-reticuline 7-O-methyltransferase 25479643 MTR_0017s0100 47.53 LOC11446393 uncharacterized protein At4g04775 11446393 MTR_7g086040 47.37 LOC25500289 uncharacterized LOC25500289 25500289 MTR_8g012675 47.32 LOC11429026 carbonic anhydrase 2 11429026 MTR_3g077910 47.23 LOC25501465 disease resistance protein RPV1 25501465 MTR_8g069625 46.97 LOC11443541 uncharacterized LOC11443541 11443541 MTR_3g055450 46.97 LOC25489577 formin-like protein 4 25489577 MTR_3g078623 46.79 LOC11423572 transmembrane emp24 domain-containing protein p24delta3 11423572 MTR_2g007210 46.78 LOC11409031 subtilisin inhibitor CLSI-I 11409031 MTR_3g020930 46.77 LOC25493310 WAT1-related protein At1g68170 25493310 MTR_4g094342 46.74 LOC11410695 disease resistance protein RPV1 11410695 MTR_2g083650 46.52 LOC11429772 disease resistance protein RPV1 11429772 MTR_1g007300 46.46 ENOD11 early nodulin-11 25490362 MTR_3g415670 46.38 LOC25484251 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 25484251 MTR_1g069825 46.33 LOC11409671 uncharacterized LOC11409671 11409671 46.14 LOC11406608 leghemoglobin 11406608 MTR_5g081030 46.09 LOC11435931 probable sulfate transporter 3.5 11435931 MTR_6g086170 46.07 LOC25500221 uncharacterized LOC25500221 25500221 46.07 LOC25482291 LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1 25482291 MTR_1g027450 45.73 LOC25496195 UDP-glycosyltransferase 74G1 25496195 MTR_6g038300 45.69 LOC11444674 protein DETOXIFICATION 43 11444674 MTR_8g036660 45.67 LOC25492924 plant cysteine oxidase 4 25492924 MTR_4g080083 45.62 LOC25485152 E3 ubiquitin-protein ligase RING1 25485152 MTR_1g103050 45.36 LOC11443024 putative receptor-like protein kinase At4g00960 11443024 MTR_3g079850 45.35 LOC25491832 probable serine/threonine protein kinase IRE 25491832 MTR_4g035835 45.27 LOC11428277 nodulin-25 11428277 MTR_3g055440 45.19 LOC11410847 uncharacterized LOC11410847 11410847 45.18 LOC25497604 uncharacterized LOC25497604 25497604 MTR_7g016060 45.12 LOC25487949 embryo-specific protein ATS3B 25487949 MTR_2g103307 45.07 LOC11437945 protein NRT1/ PTR FAMILY 5.2 11437945 MTR_7g098220 44.95 LOC11425847 E3 ubiquitin-protein ligase SINA-like 7 11425847 MTR_5g061290 44.73 LOC11433347 leghemoglobin 2-like 11433347 MTR_1g011540 44.48 LOC25479868 aspartic proteinase CDR1 25479868 MTR_0036s0110 44.46 LOC112421862 uncharacterized LOC112421862 112421862 44.36 LOC11429232 BAHD acyltransferase BIA1 11429232 MTR_2g007880 44.19 LOC25500285 uncharacterized LOC25500285 25500285 44.13 LOC11405275 pathogen-related protein 11405275 MTR_2g076010 44.07 LOC25494470 uncharacterized LOC25494470 25494470 MTR_5g004830 44.02 LOC120579706 uncharacterized LOC120579706 120579706 44.00 LOC11427552 disease resistance protein RPV1 11427552 MTR_3g079780 43.99 LOC11433927 phosphatidyl-N-methylethanolamine N-methyltransferase 11433927 MTR_4g007090 43.91 LOC112422587 uncharacterized LOC112422587 112422587 43.91 LOC25492612 glycine-rich protein 3 25492612 MTR_4g066070 43.80 LOC120580319 uncharacterized LOC120580319 120580319 43.56 LOC25493307 vacuolar iron transporter homolog 2 25493307 MTR_4g094335 43.55 LOC25497664 putative disease resistance protein At4g10780 25497664 MTR_7g018670 43.54 LOC25484843 GRIP and coiled-coil domain-containing protein 2 25484843 MTR_1g090807 43.29 LOC25484844 leghemoglobin 25484844 MTR_1g090810 43.29 LOC25484636 pathogenesis-related protein PR-4 25484636 MTR_1g080820 43.28 LOC25500037 protein PIN-LIKES 3 25500037 MTR_8g006775 43.24 LOC25480222 arginase, mitochondrial-like 25480222 MTR_0088s0100 43.07 LOC11420749 uncharacterized LOC11420749 11420749 MTR_5g084260 43.02 LOC11405376 lysine histidine transporter-like 6 11405376 MTR_1g093030 42.94 LOC11418102 early nodulin-70 11418102 MTR_3g087730 42.90 LOC120579703 uncharacterized LOC120579703 120579703 42.83 LOC11416905 subtilisin-like protease SBT3 11416905 MTR_7g079300 42.74 LOC25488598 WAT1-related protein At5g07050 25488598 MTR_3g012420 42.68 LOC25483995 uncharacterized protein At4g04775 25483995 MTR_1g064350 42.53 LOC25491540 copper transporter 1 25491540 MTR_4g019870 42.50 LOC120580600 uncharacterized LOC120580600 120580600 42.50 LOC11426411 uncharacterized LOC11426411 11426411 MTR_4g059900 42.43 LOC25495697 uncharacterized LOC25495697 25495697 MTR_6g022610 42.38 LOC25488454 disease resistance protein RPV1 25488454 MTR_3g006280 42.28 LOC25483217 leghemoglobin 29 25483217 MTR_1g049330 42.07 LOC25487005 pathogenesis-related thaumatin-like protein 3.5 25487005 MTR_2g068655 42.07 LOC25495041 uncharacterized LOC25495041 25495041 41.99 LOC25487948 embryo-specific protein ATS3B 25487948 MTR_2g103303 41.94 LOC25499370 probable serine/threonine-protein kinase irlF 25499370 MTR_7g103390 41.81 LOC25495048 uncharacterized LOC25495048 25495048 41.81 LOC11442016 mitochondrial arginine transporter BAC2 11442016 MTR_2g102010 41.71 LOC25500764 probable LRR receptor-like serine/threonine-protein kinase At1g05700 25500764 MTR_8g028110 41.65 LOC25483350 uncharacterized LOC25483350 25483350 41.64	Upper 100 Genes Symbol Function* Entrez Gene ID* Other ID PC LOC25501143 MLP-like protein 28 25501143 MTR_8g045555 62.05 LOC11442801 kunitz-type trypsin inhibitor-like 2 protein 11442801 MTR_6g044810 58.41 LOC11413892 extensin-2 11413892 MTR_1g088110 52.08 LOC25501130 putative pectinesterase/pectinesterase inhibitor 24 25501130 MTR_8g042900 51.53 LOC11422964 pectinesterase inhibitor 4 11422964 MTR_3g008760 50.17 LOC25493635 expansin-A18 25493635 MTR_4g102450 49.98 LOC25480516 probable acyl-activating enzyme 5, peroxisomal 25480516 MTR_0161s0050 49.88 LOC11414455 protein SEED AND ROOT HAIR PROTECTIVE PROTEIN 11414455 MTR_1g088130 48.27 LOC11445404 kunitz-type trypsin inhibitor-like 2 protein 11445404 MTR_6g044780 47.69 LOC25491724 cationic peroxidase 1 25491724 MTR_4g029190 47.63 LOC25493632 subtilisin-like protease 4 25493632 MTR_4g102400 46.62 LOC11430669 non-classical arabinogalactan protein 30 11430669 MTR_7g102770 46.62 LOC11439576 peroxidase 7 11439576 MTR_4g133800 46.27 LOC25488202 peroxidase 7 25488202 MTR_2g437770 46.19 LOC11411527 albumin-1 B 11411527 MTR_6g036620 45.77 LOC11408464 sugar transporter ERD6-like 16 11408464 MTR_4g118610 45.63 LOC11415340 probable caffeine synthase MTL2 11415340 MTR_3g117060 45.61 LOC11414053 kunitz-type trypsin inhibitor-like 2 protein 11414053 MTR_6g065460 45.47 LOC11427376 cytochrome P450 71D10 11427376 MTR_5g094540 45.38 LOC11429695 albumin-1 11429695 MTR_4g026590 45.32 LOC11422621 basic blue protein 11422621 MTR_8g088830 45.20 LOC112419947 QWRF motif-containing protein 7 112419947 MTR_3g408360 45.18 LOC11443452 subtilisin-like serine-protease S 11443452 MTR_4g053630 44.70 LOC11440205 14 kDa proline-rich protein DC2.15 11440205 MTR_4g108150 44.57 LOC25501700 stemmadenine O-acetyltransferase 25501700 MTR_8g079950 43.95 LOC11430644 extensin-2 11430644 MTR_2g098060 43.84 LOC11417965 albumin-1 11417965 MTR_3g067280 43.40 LOC11413029 soyasaponin III rhamnosyltransferase 11413029 MTR_6g036650 43.34 LOC120576876 probable terpene synthase 2 120576876 43.30 LOC120576878 probable terpene synthase 2 120576878 43.30 LOC11422589 albumin-1 11422589 MTR_3g067270 43.13 LOC11411376 non-classical arabinogalactan protein 30 11411376 MTR_3g071470 43.09 LOC25487567 coumaroyl-CoA:anthocyanidin 3-O-glucoside-6''-O-coumaroyltransferase 1 25487567 MTR_2g089735 42.98 LOC25488192 uncharacterized LOC25488192 25488192 MTR_2g437600 42.97 LOC25498595 protein SRG1 25498595 MTR_7g063730 42.83 LOC120576884 probable terpene synthase 2 120576884 42.75 LOC11442830 endoglucanase 5 11442830 MTR_4g074960 42.65 LOC25498399 probable terpene synthase 2 25498399 MTR_7g057390 42.60 LOC25486210 putative pectate lyase 2 25486210 MTR_2g023990 42.32 LOC25483656 calcium-dependent protein kinase 26 25483656 MTR_1g055255 42.27 LOC11436805 expansin-A7 11436805 MTR_5g011210 41.64 LOC11406007 soyasapogenol B glucuronide galactosyltransferase 11406007 MTR_7g070910 41.54 LOC25492200 agamous-like MADS-box protein AGL62 25492200 MTR_4g051538 41.44 LOC120576874 probable terpene synthase 2 120576874 41.40 LOC11414304 protein ENHANCED PSEUDOMONAS SUSCEPTIBILITY 1 11414304 MTR_4g022290 41.29 LOC25487349 thioredoxin 1 25487349 MTR_2g079360 41.23 LOC25487047 probable glutathione S-transferase 25487047 MTR_2g070200 41.08 LOC11426647 peroxidase P7 11426647 MTR_5g074860 41.02 LOC120576871 probable terpene synthase 2 120576871 40.96 LOC25483614 probable pectinesterase/pectinesterase inhibitor 7 25483614 MTR_1g054880 40.64 LOC25495384 probable caffeine synthase MTL2 25495384 MTR_6g015620 40.62 LOC120576881 probable terpene synthase 2 120576881 40.32 LOC11439496 probable xyloglucan endotransglucosylase/hydrolase protein 26 11439496 MTR_6g088320 40.17 LOC25496335 kunitz-type trypsin inhibitor-like 2 protein 25496335 MTR_6g045097 39.75 LOC11419442 putative pectinesterase/pectinesterase inhibitor 24 11419442 MTR_3g010780 39.43 LOC11410091 soyasapogenol B glucuronide galactosyltransferase 11410091 MTR_7g070740 39.29 LOC25499610 pectinesterase 25499610 MTR_7g108900 39.23 LOC25489889 defensin-like protein 1 25489889 MTR_3g097420 39.19 LOC25496303 peroxidase 12 25496303 MTR_6g043460 39.19 LOC25486307 uncharacterized LOC25486307 25486307 MTR_2g030835 39.10 LOC25483919 type-1 glutamine synthetase 1 25483919 MTR_1g062470 38.98 LOC25484289 flavanone 3-dioxygenase 2 25484289 MTR_1g070120 38.93 LOC11438317 CASP-like protein 4D1 11438317 MTR_7g024730 38.86 LOC25491725 cationic peroxidase 1 25491725 MTR_4g029200 38.80 LOC11446164 uncharacterized LOC11446164 11446164 MTR_4g039740 38.76 LOC11422744 beta-glucosidase 24 11422744 MTR_4g015460 38.53 LOC25482377 arabinogalactan protein 41 25482377 MTR_1g028610 38.19 LOC11439493 probable xyloglucan galactosyltransferase GT20 11439493 MTR_5g010370 38.16 LOC25487405 uncharacterized LOC25487405 25487405 MTR_2g080260 38.08 LOC25491776 isoflavone 4'-O-methyltransferase 25491776 MTR_4g033085 38.03 LOC11412410 cytochrome P450 94C1 11412410 MTR_2g086040 37.81 LOC25492599 DNA damage-repair/toleration protein DRT100 25492599 MTR_4g065850 37.62 LOC11446962 probable receptor-like protein kinase At4g39110 11446962 MTR_8g037700 37.55 LOC11410247 disease resistance response protein DRRG49-C 11410247 MTR_2g035120 37.44 LOC11445287 cytosolic sulfotransferase 12 11445287 MTR_8g066220 37.43 LOC25479950 ent-kaurenoic acid oxidase 2 25479950 MTR_0045s0070 37.43 LOC11429164 non-specific lipid transfer protein GPI-anchored 8 11429164 MTR_5g011980 37.41 LOC25487769 adenylate-forming reductase 06235 25487769 MTR_2g091155 37.37 LOC25491781 isoflavone 4'-O-methyltransferase 25491781 MTR_4g033170 37.31 LOC11437104 cytochrome P450 71D10 11437104 MTR_5g094550 37.18 LOC11411570 non-classical arabinogalactan protein 30 11411570 MTR_4g017240 37.12 LOC25498743 GDSL esterase/lipase CPRD49 25498743 MTR_7g068450 37.05 LOC25497868 albumin-1 25497868 MTR_7g029540 37.04 LOC11436500 uncharacterized LOC11436500 11436500 MTR_7g052240 36.91 LOC11439569 putative pectate lyase 2 11439569 MTR_4g132460 36.89 LOC11415324 peroxidase 64 11415324 MTR_1g025980 36.83 LOC120575865 probable terpene synthase 2 120575865 36.74 LOC25492470 cytochrome P450 93B16 25492470 MTR_4g062500 36.54 LOC120580864 probable terpene synthase 2 120580864 36.51 LOC120575944 probable terpene synthase 2 120575944 36.47 LOC120575943 probable terpene synthase 2 120575943 36.43 LOC25491783 isoflavone 4'-O-methyltransferase 25491783 MTR_4g033200 36.40 LOC11407498 probable pectinesterase/pectinesterase inhibitor 41 11407498 MTR_1g083520 36.39 LOC120575864 probable terpene synthase 2 120575864 36.36 LOC11412982 UPF0481 protein At3g47200 11412982 MTR_6g010810 36.32 LOC11429451 linoleate 9S-lipoxygenase 11429451 MTR_8g018510 36.23 LOC25492635 transcription factor bHLH18 25492635 MTR_4g066460 36.20 LOC25486798 isoliquiritigenin 2'-O-methyltransferase 25486798 MTR_2g055940 36.18 LOC25490959 (3S,6E)-nerolidol synthase 1 25490959 MTR_3g465090 36.18 LOC25485843 O-acyltransferase WSD1-like 25485843 36.11	Upper 100 Genes Symbol Function* Entrez Gene ID* Other ID PC LOC25490436 albumin-1 25490436 MTR_3g436100 64.65 LOC112417957 uncharacterized LOC112417957 112417957 49.99 LOC25496102 soyasapogenol B glucuronide galactosyltransferase 25496102 MTR_6g035295 49.18 LOC120580319 uncharacterized LOC120580319 120580319 46.74 LOC25486294 tyrosine decarboxylase 1 25486294 MTR_2g029450 45.55 LOC120575980 soyasapogenol B glucuronide galactosyltransferase-like 120575980 44.97 LOC112416111 zinc finger BED domain-containing protein RICESLEEPER 2 112416111 MTR_8g042355 42.51 LOC120577884 uncharacterized LOC120577884 120577884 41.29 LOC11437209 uncharacterized LOC11437209 11437209 MTR_7g082820 40.81 LOC11424936 probable F-box protein At5g04010 11424936 MTR_1g041810 40.61 LOC11415781 zinc finger A20 and AN1 domain-containing stress-associated protein 3 11415781 MTR_2g086190 40.57 LOC11415970 desiccation-related protein PCC13-62 11415970 MTR_2g033550 39.30 LOC25494404 non-specific lipid-transfer protein 25494404 MTR_4g428370 39.28 LOC11437117 2-oxoglutarate-dependent dioxygenase 19 11437117 MTR_5g065010 38.99 LOC112416489 uncharacterized LOC112416489 112416489 38.80 LOC11410847 uncharacterized LOC11410847 11410847 38.55 LOC112417123 protein FAR1-RELATED SEQUENCE 5-like 112417123 38.41 LOC112416096 uncharacterized LOC112416096 112416096 MTR_1g022060 37.68 LOC11432734 phloretin 4'-O-glucosyltransferase 11432734 MTR_3g084530 37.48 LOC11412608 snakin-2 11412608 MTR_1g025220 37.29 LOC112421892 uncharacterized LOC112421892 112421892 37.20 LOC120575721 protein STRICTOSIDINE SYNTHASE-LIKE 10-like 120575721 37.17 LOC112421420 uncharacterized LOC112421420 112421420 36.89 LOC11408634 probable glutathione S-transferase 11408634 MTR_7g065740 36.80 LOC25488487 aspartic proteinase Asp1 25488487 MTR_3g006820 36.69 LOC25483743 probable fructokinase-7 25483743 MTR_1g057810 36.56 LOC25482116 uncharacterized LOC25482116 25482116 36.53 LOC112422451 uncharacterized LOC112422451 112422451 36.52 LOC112416438 uncharacterized LOC112416438 112416438 36.50 LOC11415131 probable fructokinase-7 11415131 36.37 LOC11424740 F-box/kelch-repeat protein At3g06240 11424740 MTR_2g066200 36.00 LOC25491784 chloroplast envelope quinone oxidoreductase homolog 25491784 MTR_4g033205 35.94 LOC112419422 uncharacterized LOC112419422 112419422 35.65 LOC11405976 MLP-like protein 423 11405976 MTR_5g035010 35.64 LOC112421862 uncharacterized LOC112421862 112421862 35.59 LOC25497900 protein ALTERED XYLOGLUCAN 4 25497900 MTR_7g033230 35.21 LOC112419102 uncharacterized LOC112419102 112419102 34.76 LOC25496612 ABC transporter G family member 11 25496612 MTR_6g066240 34.71 LOC25491771 chloroplast envelope quinone oxidoreductase homolog 25491771 MTR_4g032995 34.54 LOC11439880 uncharacterized LOC11439880 11439880 MTR_4g085760 34.05 LOC11424867 acidic endochitinase 11424867 MTR_1g099350 34.00 LOC11424965 linoleate 9S-lipoxygenase 11424965 MTR_8g018570 33.99 LOC11426459 cytochrome P450 71D10 11426459 MTR_5g073250 33.85 LOC112419189 uncharacterized LOC112419189 112419189 33.67 LOC25486632 soyasaponin III rhamnosyltransferase 25486632 MTR_2g046620 33.54 LOC25492054 primary amine oxidase 25492054 MTR_4g045887 33.48 LOC11423715 calmodulin 11423715 MTR_3g055520 33.47 LOC112420491 uncharacterized protein DDB_G0290685-like 112420491 33.44 LOC112421383 uncharacterized LOC112421383 112421383 33.40 LOC11408033 phototropin-1-like 11408033 33.37 LOC112416805 uncharacterized LOC112416805 112416805 33.19 LOC112417298 disease resistance protein RPV1-like 112417298 MTR_8g020230 33.17 LOC25496414 albumin-1 25496414 MTR_6g047900 33.16 LOC25498900 uncharacterized LOC25498900 25498900 MTR_7g077430 33.02 LOC25491430 dirigent protein 20 25491430 MTR_4g013330 32.96 LOC120578198 very-long-chain aldehyde decarbonylase CER3-like 120578198 32.87 LOC11418162 albumin-1 11418162 MTR_1g019650 32.76 LOC112419133 uncharacterized LOC112419133 112419133 32.68 LOC112422903 zinc finger BED domain-containing protein RICESLEEPER 2-like 112422903 32.66 LOC11417206 pentatricopeptide repeat-containing protein At1g12775, mitochondrial 11417206 MTR_1g021250 32.65 LOC25483345 uncharacterized LOC25483345 25483345 MTR_1g051765 32.48 LOC25497917 polygalacturonase inhibitor 25497917 MTR_7g033445 32.46 LOC112416289 uncharacterized LOC112416289 112416289 32.44 LOC25489039 putative bark agglutinin LECRPA3 25489039 MTR_3g054200 32.40 LOC25485501 3-ketoacyl-CoA synthase 6 25485501 MTR_1g110930 32.15 LOC11407700 (-)-isopiperitenol/(-)-carveol dehydrogenase, mitochondrial 11407700 MTR_6g023910 32.08 LOC120580909 uncharacterized LOC120580909 120580909 31.88 LOC11421015 UDP-glucose flavonoid 3-O-glucosyltransferase 7 11421015 MTR_7g012120 31.54 LOC11405680 putative F-box/FBD/LRR-repeat protein At1g78760 11405680 MTR_4g092510 31.49 LOC25497868 albumin-1 25497868 MTR_7g029540 31.47 LOC11421235 GDSL esterase/lipase APG 11421235 MTR_8g014910 31.43 LOC120575797 non-specific lipid-transfer protein-like 120575797 30.89 LOC11416150 probable carboxylesterase 18 11416150 MTR_6g065430 30.69 LOC25494032 primary amine oxidase 25494032 MTR_4g117660 30.66 LOC120576894 uncharacterized LOC120576894 120576894 30.59 LOC11443990 very-long-chain aldehyde decarbonylase CER1-like 11443990 30.46 LOC11417934 kinesin-like protein KIN-7G 11417934 MTR_8g076190 30.42 LOC25480242 uncharacterized LOC25480242 25480242 30.37 LOC11420410 probable 2-oxoglutarate-dependent dioxygenase At5g05600 11420410 MTR_4g015790 30.35 LOC11425619 protein SIEVE ELEMENT OCCLUSION B 11425619 MTR_1g074950 30.33 LOC120575772 UDP-glucose flavonoid 3-O-glucosyltransferase 7-like 120575772 30.21 LOC25486022 GDSL esterase/lipase At1g29670 25486022 MTR_2g017875 30.18 LOC25500504 seed linoleate 9S-lipoxygenase 25500504 MTR_8g018735 29.98 LOC25494999 uncharacterized LOC25494999 25494999 MTR_5g030310 29.97 LOC25487123 cytochrome P450 72A68-like 25487123 MTR_2g072250 29.94 LOC25492843 proline-rich protein 4 25492843 MTR_4g075333 29.78 LOC112417241 uncharacterized LOC112417241 112417241 29.68 LOC25491773 isoflavone 4'-O-methyltransferase 25491773 MTR_4g033015 29.68 LOC11412291 transcription factor MYB30 11412291 MTR_6g012180 29.67 LOC11417495 7-deoxyloganetin glucosyltransferase 11417495 MTR_6g014220 29.12 LOC25496034 ABC transporter C family member 10 25496034 MTR_6g034335 29.08 LOC11413384 uncharacterized LOC11413384 11413384 MTR_4g096890 29.03 LOC11405289 protein IWS1 homolog 11405289 MTR_3g034610 29.03 LOC112418737 uncharacterized LOC112418737 112418737 29.00 LOC112419132 uncharacterized LOC112419132 112419132 28.92 LOC11424571 UNC93-like protein 3 11424571 MTR_7g099870 28.85 LOC25501537 leucine-rich repeat receptor protein kinase HPCA1 25501537 MTR_8g070890 28.60 LOC11440683 O-acyltransferase WSD1 11440683 MTR_4g078390 28.42 LOC120577284 uncharacterized LOC120577284 120577284 28.38 LOC11443123 cysteine protease XCP2 11443123 MTR_7g086240 28.23	Upper 100 Genes Symbol Function* Entrez Gene ID* Other ID PC LOC25487054 nicotianamine synthase 25487054 MTR_2g070310 38.26 LOC11422481 germin-like protein subfamily 1 member 7 11422481 MTR_4g017030 36.54 LOC11416574 cytochrome P450 71D8 11416574 MTR_5g019010 34.87 LOC25498365 uncharacterized LOC25498365 25498365 MTR_7g056667 33.84 LOC11408538 isoliquiritigenin 2'-O-methyltransferase 11408538 MTR_7g012070 32.67 LOC11425078 germin-like protein subfamily 1 member 16 11425078 MTR_1g079490 31.72 LOC11436565 probable WRKY transcription factor 40 11436565 MTR_1g013760 31.59 LOC25491723 peroxidase P7 25491723 MTR_4g029180 30.49 LOC11419449 isoliquiritigenin 2'-O-methyltransferase 11419449 MTR_7g012090 29.80 LOC25488766 rust resistance kinase Lr10 25488766 MTR_3g028650 29.69 LOC25496076 uncharacterized LOC25496076 25496076 29.68 LOC11418054 glutathione S-transferase U9 11418054 MTR_5g040430 29.50 LOC11436058 EG45-like domain containing protein 11436058 MTR_3g107500 29.32 LOC11436579 uncharacterized LOC11436579 11436579 MTR_8g006190 29.21 LOC25488770 cyanogenic beta-glucosidase 25488770 MTR_3g028720 29.16 LOC11439325 germin-like protein subfamily 1 member 7 11439325 MTR_2g019250 28.94 LOC25487161 probable disease resistance protein At4g27220 25487161 MTR_2g072820 28.85 LOC11407838 ABC transporter G family member STR2-like 11407838 MTR_5g030910 28.84 LOC11446331 cytochrome P450 704C1 11446331 MTR_8g035810 28.62 LOC25482358 spermine synthase 25482358 MTR_1g028360 28.46 LOC25485714 F-box protein At2g39490 25485714 MTR_1g115400 28.08 LOC25497510 MDIS1-interacting receptor like kinase 2 25497510 MTR_7g013680 27.93 LOC11417815 polyvinylalcohol dehydrogenase 11417815 MTR_7g009780 27.91 LOC11436699 geraniol 8-hydroxylase 11436699 MTR_5g007450 27.88 LOC11406722 cysteine-rich receptor-like protein kinase 2 11406722 MTR_3g064110 27.62 LOC25496773 glutathione S-transferase U7 25496773 MTR_6g080440 27.37 LOC11428907 geraniol 8-hydroxylase 11428907 MTR_5g007550 27.24 LOC25501401 L-type lectin-domain containing receptor kinase IX.1 25501401 MTR_8g067735 27.24 LOC25491722 peroxidase P7 25491722 MTR_4g029170 27.17 LOC11413855 peroxidase A2 11413855 MTR_2g029910 26.92 LOC11444966 kunitz-type trypsin inhibitor-like 2 protein 11444966 MTR_6g059410 26.86 LOC11433956 putative germin-like protein 2-1 11433956 MTR_6g005360 26.85 LOC120579759 (-)-germacrene D synthase-like 120579759 26.84 LOC11416956 exocyst complex component EXO70B1 11416956 MTR_5g073460 26.80 LOC11414117 isoliquiritigenin 2'-O-methyltransferase 11414117 MTR_3g021430 26.78 LOC11434140 albumin-2 11434140 MTR_1g066530 26.57 LOC11415953 wall-associated receptor kinase-like 1 11415953 MTR_2g031530 26.35 LOC25487204 geraniol 8-hydroxylase 25487204 MTR_2g073420 26.33 LOC11438023 cytochrome P450 71D9 11438023 MTR_3g057900 26.14 LOC11434353 TMV resistance protein N 11434353 MTR_2g012770 26.01 LOC25492583 extensin-2 25492583 MTR_4g065107 25.91 LOC11430277 vesicle-associated membrane protein 722 11430277 MTR_7g058640 25.88 LOC11413927 class-10 pathogenesis-related protein 1-like 11413927 MTR_2g035130 25.83 LOC11437724 peroxidase N 11437724 MTR_2g040000 25.74 LOC11413143 protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 11413143 MTR_6g079090 25.49 LOC11431706 peroxidase 20 11431706 MTR_5g014100 25.33 LOC120575853 TMV resistance protein N-like 120575853 25.31 LOC11415970 desiccation-related protein PCC13-62 11415970 MTR_2g033550 25.28 LOC11429843 patatin-like protein 2 11429843 MTR_3g101400 25.23 LOC11406788 WAT1-related protein At4g08290 11406788 MTR_3g072520 25.19 LOC11408357 transcription factor JUNGBRUNNEN 1 11408357 MTR_2g068880 25.05 LOC11446878 licodione synthase 11446878 MTR_7g027960 24.96 LOC11407372 probable glutathione S-transferase 11407372 MTR_7g065270 24.91 LOC11431159 respiratory burst oxidase homolog protein D 11431159 MTR_3g098350 24.75 LOC11430848 putative UDP-glucose glucosyltransferase 11430848 MTR_3g049970 24.71 LOC11416930 galactinol synthase 2-like 11416930 24.71 LOC112416093 disease resistance protein RPV1-like 112416093 24.69 LOC11446101 isoflavone 7-O-methyltransferase 11446101 MTR_7g024500 24.64 LOC25480539 3,9-dihydroxypterocarpan 6A-monooxygenase 25480539 MTR_0171s0010 24.62 LOC25498637 probable glutathione S-transferase 25498637 MTR_7g065265 24.62 LOC25489726 wall-associated receptor kinase 2 25489726 MTR_3g088760 24.61 LOC11445406 LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1 11445406 MTR_6g044970 24.56 LOC25491975 receptor-like protein EIX2 25491975 MTR_4g040330 24.41 LOC112422587 uncharacterized LOC112422587 112422587 24.39 LOC25498361 G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300 25498361 MTR_7g056663 24.33 LOC11410613 cytochrome P450 86A1 11410613 MTR_5g070010 24.31 LOC11436124 receptor-like protein 32 11436124 MTR_5g095120 24.30 LOC11435500 cytochrome P450 72A68-like 11435500 MTR_5g095230 24.18 LOC25493042 glutamate receptor 2.7 25493042 MTR_4g087925 24.18 LOC25490822 cytochrome P450 86A1-like 25490822 24.15 LOC11432721 low affinity inorganic phosphate transporter 1 11432721 MTR_3g082700 24.14 LOC11429614 protein ATAF2 11429614 MTR_1g008740 24.07 LOC25490548 LRR receptor-like serine/threonine-protein kinase GSO1 25490548 MTR_3g449540 24.06 LOC25483417 uncharacterized LOC25483417 25483417 MTR_1g052640 24.01 LOC11416931 galactinol synthase 2 11416931 MTR_1g084670 23.96 LOC11410669 receptor-like protein EIX2 11410669 MTR_3g041560 23.95 LOC11441846 receptor-like protein EIX2 11441846 MTR_2g017470 23.94 LOC25502566 LRR receptor-like serine/threonine-protein kinase EFR 25502566 MTR_8g464610 23.94 LOC11424098 putative germin-like protein 2-1 11424098 MTR_6g005310 23.93 LOC25486783 LRR receptor-like serine/threonine-protein kinase FLS2 25486783 MTR_2g055690 23.91 LOC25489446 sugar transport protein 5 25489446 MTR_3g074380 23.88 LOC11432618 heavy metal-associated isoprenylated plant protein 22 11432618 MTR_5g055020 23.81 LOC112419140 uncharacterized LOC112419140 112419140 23.79 LOC25488616 cytochrome P450 82A4 25488616 MTR_3g014880 23.76 LOC25479655 glutamate receptor 2.8 25479655 MTR_0018s0230 23.75 LOC11411940 peroxidase 10 11411940 MTR_5g017850 23.73 LOC25492638 cyanogenic beta-glucosidase 25492638 MTR_4g066580 23.73 LOC112416779 zinc finger protein ZAT11-like 112416779 23.72 LOC25480088 uncharacterized LOC25480088 25480088 MTR_0062s0040 23.72 LOC25499818 uncharacterized LOC25499818 25499818 MTR_7g407010 23.66 LOC11413938 phenylcoumaran benzylic ether reductase POP1 11413938 MTR_4g070370 23.60 LOC25480055 codeine O-demethylase 25480055 MTR_0056s0160 23.57 LOC11440532 desmethyl-deoxy-podophyllotoxin synthase 11440532 MTR_3g057800 23.53 LOC25483509 uncharacterized LOC25483509 25483509 MTR_1g053900 23.52 LOC11438342 licodione synthase 11438342 MTR_7g028020 23.44 LOC25490171 elongation of fatty acids protein 3-like 25490171 MTR_3g111610 23.42 LOC11414519 disease resistance protein RPV1 11414519 MTR_4g014240 23.42 LOC11435998 probable WRKY transcription factor 40 11435998 MTR_1g013790 23.41 LOC11443285 kunitz-type trypsin inhibitor-like 2 protein 11443285 MTR_6g059530 23.40 LOC11417364 TMV resistance protein N 11417364 MTR_5g040440 23.30	Upper 100 Genes Symbol Function* Entrez Gene ID* Other ID PC LOC25487054 nicotianamine synthase 25487054 MTR_2g070310 36.19 LOC11409765 1-aminocyclopropane-1-carboxylate oxidase homolog 1 11409765 MTR_2g069300 33.33 LOC11438939 endoglucanase 1 11438939 MTR_3g080810 32.10 LOC25491479 receptor-like protein 6 25491479 MTR_4g017710 30.33 LOC25487110 probable disease resistance protein At4g27220 25487110 MTR_2g071860 29.82 LOC11410789 wound-induced protein 1 11410789 MTR_3g031270 29.72 LOC25480222 arginase, mitochondrial-like 25480222 MTR_0088s0100 29.00 LOC11432698 metal tolerance protein 10 11432698 MTR_3g080090 28.88 LOC25480356 putative expansin-B2 25480356 MTR_0118s0070 28.62 LOC25499375 cytochrome P450 76A2 25499375 MTR_7g103450 27.68 ENOD11 early nodulin-11 25490362 MTR_3g415670 27.10 LOC11422023 uncharacterized LOC11422023 11422023 MTR_2g030460 26.84 LOC25496332 albumin-2 25496332 MTR_6g045077 26.83 LOC11413286 probable pectate lyase 5 11413286 MTR_3g086320 26.23 LOC25484963 isoliquiritigenin 2'-O-methyltransferase 25484963 MTR_1g096310 26.20 LOC25479950 ent-kaurenoic acid oxidase 2 25479950 MTR_0045s0070 25.97 LOC11408730 fasciclin-like arabinogalactan protein 11 11408730 MTR_4g059780 25.86 LOC11405610 GDSL esterase/lipase At1g54790 11405610 MTR_1g082390 25.84 LOC11425847 E3 ubiquitin-protein ligase SINA-like 7 11425847 MTR_5g061290 25.54 LOC25479633 uncharacterized LOC25479633 25479633 25.44 LOC11433154 vestitone reductase 11433154 MTR_7g074730 25.21 LOC11423461 glutathione S-transferase U19 11423461 MTR_5g076900 25.11 LOC25479868 aspartic proteinase CDR1 25479868 MTR_0036s0110 25.01 LOC25487683 early nodulin-like protein 2 25487683 MTR_2g090580 24.80 LOC11405741 uncharacterized LOC11405741 11405741 24.41 LOC25490355 repetitive proline-rich cell wall protein 1 25490355 MTR_3g415580 24.31 LOC25500851 ferric reduction oxidase 2 25500851 MTR_8g028780 24.23 LOC112417957 uncharacterized LOC112417957 112417957 23.80 LOC25480242 uncharacterized LOC25480242 25480242 23.80 LOC11433487 hydroquinone glucosyltransferase 11433487 MTR_8g006270 23.67 LOC11413855 peroxidase A2 11413855 MTR_2g029910 23.61 LOC112416779 zinc finger protein ZAT11-like 112416779 23.18 LOC11413997 fasciclin-like arabinogalactan protein 12 11413997 MTR_2g093970 23.16 LOC11431236 bidirectional sugar transporter SWEET14 11431236 MTR_3g098930 23.09 LOC25487367 CBS domain-containing protein CBSX5 25487367 MTR_2g079650 22.97 LOC25495693 nodulin-1 25495693 22.86 LOC11407094 geranylgeranyl pyrophosphate synthase 7, chloroplastic 11407094 MTR_5g019460 22.83 LOC25483934 protein fluG 25483934 MTR_1g062710 22.78 LOC25499120 probable inactive patatin-like protein 9 25499120 MTR_7g094940 22.53 LOC25490361 early nodulin-12-like 25490361 MTR_3g415650 22.43 LOC11442920 fasciclin-like arabinogalactan protein 11 11442920 MTR_2g017950 22.18 LOC25481907 wall-associated receptor kinase 5 25481907 MTR_1g010220 22.16 LOC11441406 uncharacterized LOC11441406 11441406 MTR_4g086340 22.15 LOC25479569 2-alkenal reductase (NADP(+)-dependent) 25479569 MTR_0011s0280 21.95 LOC25488598 WAT1-related protein At5g07050 25488598 MTR_3g012420 21.80 LOC11433603 putative expansin-A17 11433603 21.71 LOC25495048 uncharacterized LOC25495048 25495048 21.62 LOC11419346 chalcone synthase 5 11419346 MTR_2g058470 21.60 LOC25483534 peroxidase A2 25483534 MTR_1g054205 21.58 LOC11406450 fasciclin-like arabinogalactan protein 12 11406450 MTR_4g059790 21.43 LOC11441045 non-specific lipid transfer protein GPI-anchored 7 11441045 MTR_5g011950 21.35 LOC25495194 probable zinc transporter 12 25495194 MTR_6g007687 21.20 LOC25501099 uncharacterized LOC25501099 25501099 MTR_8g040940 21.14 LOC11418214 MLO protein homolog 1 11418214 MTR_3g115940 21.00 LOC11438309 fasciclin-like arabinogalactan protein 12 11438309 MTR_2g017960 20.98 LOC25482358 spermine synthase 25482358 MTR_1g028360 20.70 LOC120575936 uncharacterized LOC120575936 120575936 20.60 LOC11440789 PTI1-like tyrosine-protein kinase At3g15890 11440789 MTR_4g129010 20.53 LOC11412982 UPF0481 protein At3g47200 11412982 MTR_6g010810 20.49 LOC11437945 protein NRT1/ PTR FAMILY 5.2 11437945 MTR_7g098220 20.37 LOC11431135 trimethyltridecatetraene synthase 11431135 MTR_8g020960 20.33 LOC25498663 uncharacterized LOC25498663 25498663 MTR_7g066110 20.27 LOC11442016 mitochondrial arginine transporter BAC2 11442016 MTR_2g102010 20.26 LOC25498595 protein SRG1 25498595 MTR_7g063730 20.25 LOC120579703 uncharacterized LOC120579703 120579703 20.25 LOC11435082 nuclear transcription factor Y subunit A-10 11435082 MTR_1g056530 20.24 LOC11419467 peroxidase A2 11419467 MTR_7g093370 20.03 LOC11426638 putative expansin-A17 11426638 MTR_7g111010 20.01 LOC25491118 linamarin synthase 1 25491118 MTR_3g479490 19.83 LOC25491081 uncharacterized LOC25491081 25491081 MTR_3g467150 19.81 LOC11438595 non-specific lipid transfer protein GPI-anchored 8 11438595 MTR_5g011960 19.69 LOC25484251 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 25484251 MTR_1g069825 19.66 LOC11429026 carbonic anhydrase 2 11429026 MTR_3g077910 19.66 LOC11417426 peroxidase 22 11417426 MTR_2g029880 19.65 LOC11434353 TMV resistance protein N 11434353 MTR_2g012770 19.63 LOC11442449 ammonium transporter 3 member 1 11442449 MTR_8g095040 19.63 LOC25488436 COBRA-like protein 4 25488436 MTR_2g462000 19.63 LOC25479655 glutamate receptor 2.8 25479655 MTR_0018s0230 19.63 LOC11444178 early nodulin-20 11444178 MTR_4g130800 19.53 LOC11406538 cationic peroxidase 1 11406538 MTR_5g074710 19.44 LOC25489717 stilbene synthase 4 25489717 MTR_3g088675 19.34 LOC11424022 acanthoscurrin-2 11424022 MTR_5g084040 19.27 LOC120575861 uncharacterized LOC120575861 120575861 19.23 LOC11427552 disease resistance protein RPV1 11427552 MTR_3g079780 19.23 LOC25493984 class V chitinase CHIT5b-like 25493984 MTR_4g117000 19.22 LOC11426319 uncharacterized LOC11426319 11426319 MTR_5g026290 19.20 LOC11431212 putative protein phosphatase 2C-like protein 44 11431212 MTR_1g075730 19.16 LOC11408001 fasciclin-like arabinogalactan protein 12 11408001 MTR_4g059840 19.03 LOC25480329 uncharacterized LOC25480329 25480329 18.98 LOC11410708 cellulose synthase A catalytic subunit 7 [UDP-forming] 11410708 MTR_8g063270 18.98 LOC11432174 mogroside IE synthase 11432174 MTR_7g080950 18.97 LOC25484218 cellulose synthase A catalytic subunit 4 [UDP-forming] 25484218 MTR_1g069605 18.92 LOC112419171 uncharacterized LOC112419171 112419171 18.92 LOC25502600 amino acid transporter AVT1I 25502600 MTR_8g465310 18.73 LOC11413732 TMV resistance protein N 11413732 MTR_7g078770 18.71 LOC11416554 putative receptor-like protein kinase At3g47110 11416554 MTR_5g025840 18.67 LOC11427680 cystathionine gamma-synthase 1, chloroplastic 11427680 MTR_6g012730 18.65 LOC120575937 uncharacterized LOC120575937 120575937 18.54 LOC25499785 bidirectional sugar transporter N3-like 25499785 MTR_7g405730 18.46 LOC11446462 uncharacterized LOC11446462 11446462 MTR_7g093330 18.45	Upper 100 Genes Symbol Function* Entrez Gene ID* Other ID PC LOC112416385 polygalacturonase inhibitor 1-like 112416385 35.47 LOC11445854 polygalacturonase inhibitor 1 11445854 MTR_7g023740 33.91 LOC25482525 1-aminocyclopropane-1-carboxylate oxidase homolog 4 25482525 MTR_1g032140 33.77 LOC25502011 probable WRKY transcription factor 75 25502011 32.47 LOC11414072 albumin-2 11414072 MTR_6g073540 32.31 LOC25487219 probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 25487219 MTR_2g073650 32.02 LOC11439410 probable caffeoyl-CoA O-methyltransferase At4g26220 11439410 MTR_6g091680 31.92 LOC11415635 peroxidase P7 11415635 MTR_2g084080 31.67 LOC11430604 non-specific lipid-transfer protein 4 11430604 MTR_4g029390 31.36 LOC25495904 mitochondrial phosphate carrier protein 3, mitochondrial 25495904 MTR_6g033280 30.96 LOC11431334 GDSL esterase/lipase At5g33370 11431334 MTR_7g116520 30.68 LOC11410588 cytochrome P450 81E8-like 11410588 MTR_5g016440 30.38 LOC11418495 pterocarpan synthase 1 11418495 MTR_7g093820 30.04 LOC25491649 cytochrome P450 71A1 25491649 MTR_4g026030 29.76 LOC25485043 chalcone synthase 8 25485043 MTR_1g097935 29.05 LOC11432094 F-box/kelch-repeat protein At3g23880 11432094 MTR_5g048160 28.98 LOC25491055 expansin-A8 25491055 MTR_3g466760 28.95 LOC25486501 auxin-binding protein ABP19a 25486501 MTR_2g041550 28.94 LOC11420334 chalcone synthase 8 11420334 MTR_1g097910 28.74 LOC11445613 polygalacturonase inhibitor 2 11445613 MTR_7g023730 28.73 LOC25483926 thaumatin-like protein 1b 25483926 MTR_1g062590 28.64 LOC11435251 endochitinase PR4 11435251 MTR_2g099470 28.60 LOC25491506 laccase-7 25491506 MTR_4g019225 28.36 LOC11418359 glutathione transferase GST 23 11418359 MTR_1g090150 28.18 LOC11442445 probable xyloglucan endotransglucosylase/hydrolase protein B 11442445 MTR_7g084750 28.03 LOC11438424 elicitor-responsive protein 1 11438424 MTR_5g079890 27.95 LOC11414455 protein SEED AND ROOT HAIR PROTECTIVE PROTEIN 11414455 MTR_1g088130 27.70 LOC11435804 uncharacterized LOC11435804 11435804 MTR_4g082590 27.54 LOC11422141 ribonuclease 1 11422141 MTR_5g040960 27.50 LOC120577917 chalcone synthase 4 120577917 27.42 LOC11423583 WAT1-related protein At1g25270 11423583 MTR_2g007970 27.40 LOC25484634 pathogenesis-related protein PR-4 25484634 MTR_1g080800 27.24 LOC25502480 gibberellin 2-beta-dioxygenase 1 25502480 MTR_8g461330 27.14 LOC25497756 probable WRKY transcription factor 75 25497756 MTR_7g028415 26.98 LOC11438342 licodione synthase 11438342 MTR_7g028020 26.81 LOC25484647 uncharacterized LOC25484647 25484647 MTR_1g080990 26.73 LOC11437823 CASP-like protein 1E2 11437823 MTR_2g020060 26.65 LOC25499810 probable carboxylesterase 17 25499810 MTR_7g406880 26.47 LOC11422489 uncharacterized LOC11422489 11422489 MTR_4g018860 26.46 LOC25488708 flavonoid 3'-monooxygenase 25488708 MTR_3g024520 26.41 LOC11442534 chalcone synthase 4 11442534 MTR_5g007760 26.32 LOC11413598 uncharacterized LOC11413598 11413598 MTR_4g059670 26.30 LOC25492639 cyanogenic beta-glucosidase 25492639 MTR_4g066590 26.16 LOC11407003 chalcone synthase 4 11407003 MTR_1g098140 26.14 LOC25493342 polygalacturonase inhibitor 2 25493342 MTR_4g094440 25.96 LOC25493516 cytochrome P450 81E8-like 25493516 MTR_4g095050 25.93 LOC25501074 repetitive proline-rich cell wall protein 1-like 25501074 MTR_8g037933 25.88 LOC25489483 protein PHOSPHATE-INDUCED 1 25489483 MTR_3g074860 25.88 LOC25480106 F-box/kelch-repeat protein At3g06240 25480106 MTR_0064s0160 25.77 LOC11405463 probable mannitol dehydrogenase 11405463 MTR_5g031390 25.76 LOC11437801 polygalacturonase inhibitor-like 11437801 25.52 LOC25501241 NAC domain-containing protein 72 25501241 MTR_8g059170 25.52 LOC11429843 patatin-like protein 2 11429843 MTR_3g101400 25.47 LOC25492868 glucan endo-1,3-beta-glucosidase 25492868 MTR_4g076255 25.28 LOC11406715 provicilin 11406715 MTR_7g079820 25.24 LOC11446878 licodione synthase 11446878 MTR_7g027960 25.17 LOC25499746 probable RNA-binding protein ARP1 25499746 MTR_7g117495 24.99 LOC11424392 uncharacterized LOC11424392 11424392 MTR_3g099490 24.74 LOC11446464 probable xyloglucan endotransglucosylase/hydrolase protein 23 11446464 MTR_7g093530 24.66 LOC11445865 uncharacterized N-acetyltransferase p20 11445865 MTR_7g024760 24.57 LOC11424576 pterocarpan synthase 1 11424576 MTR_7g093850 24.53 LOC11409073 CASP-like protein 1E1 11409073 MTR_4g118810 24.52 LOC25496855 dehydrin DHN1 25496855 MTR_6g084640 24.48 LOC25492197 E3 ubiquitin-protein ligase PUB24 25492197 MTR_4g051515 24.42 LOC11417231 expansin-A11 11417231 MTR_1g026020 24.36 LOC25484917 probable cysteine protease RD19D 25484917 MTR_1g094135 24.28 LOC11421235 GDSL esterase/lipase APG 11421235 MTR_8g014910 24.26 LOC25487932 coatomer subunit beta'-3 25487932 MTR_2g102267 24.25 LOC25493669 putative calcium-binding protein CML19 25493669 MTR_4g103655 24.24 LOC25492599 DNA damage-repair/toleration protein DRT100 25492599 MTR_4g065850 24.21 LOC11410743 uncharacterized LOC11410743 11410743 MTR_4g058760 24.21 LOC25490457 uncharacterized LOC25490457 25490457 MTR_3g436750 24.21 LOC11420385 (S)-8-oxocitronellyl enol synthase ISY1 11420385 MTR_1g018610 24.15 LOC25502021 protein P21 25502021 MTR_8g096900 24.12 LOC11440324 polygalacturonase inhibitor 1 11440324 MTR_7g023670 23.99 LOC11411115 probable terpene synthase 2 11411115 MTR_5g073200 23.88 LOC25487611 uncharacterized LOC25487611 25487611 MTR_2g090110 23.82 LOC25480955 uncharacterized LOC25480955 25480955 MTR_0365s0010 23.75 LOC11412981 uncharacterized LOC11412981 11412981 MTR_4g070570 23.70 LOC11435816 sugar transport protein 13 11435816 MTR_5g006070 23.60 LOC11418508 peroxidase P7 11418508 MTR_3g094650 23.59 LOC11434820 protein PELPK1 11434820 MTR_2g009480 23.58 LOC112420427 uncharacterized LOC112420427 112420427 23.56 LOC25481939 uncharacterized LOC25481939 25481939 MTR_1g012950 23.48 LOC25499467 NDR1/HIN1-like protein 10 25499467 MTR_7g106000 23.45 LOC11415233 MDIS1-interacting receptor like kinase 2 11415233 MTR_3g009050 23.44 LOC11421144 chalcone synthase 2 11421144 MTR_7g016780 23.43 LOC25488834 gibberellin-regulated protein 6 25488834 MTR_3g037750 23.43 LOC25502611 G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 25502611 23.41 LOC11420565 VQ motif-containing protein 29 11420565 MTR_5g015190 23.40 LOC11439969 aldehyde dehydrogenase family 2 member C4 11439969 MTR_6g086340 23.33 LOC25502551 uncharacterized LOC25502551 25502551 MTR_8g464300 23.08 LOC25484883 geraniol 8-hydroxylase 25484883 MTR_1g091023 23.01 LOC11446164 uncharacterized LOC11446164 11446164 MTR_4g039740 22.95 LOC25491058 expansin-A8 25491058 MTR_3g466790 22.90 LOC11436702 chalcone synthase 4 11436702 MTR_5g007730 22.86 LOC25494542 polyneuridine-aldehyde esterase 25494542 MTR_5g018365 22.83 LOC11421669 pterocarpan synthase 1 11421669 MTR_7g093830 22.82 LOC112421176 21 kDa protein-like 112421176 MTR_4g101760 22.81 LOC11414040 very-long-chain aldehyde decarbonylase CER1 11414040 MTR_7g090140 22.80	Upper 100 Genes Symbol Function* Entrez Gene ID* Other ID PC LOC11413598 uncharacterized LOC11413598 11413598 MTR_4g059670 39.01 LOC11410042 uncharacterized LOC11410042 11410042 MTR_4g059630 37.72 LOC25502551 uncharacterized LOC25502551 25502551 MTR_8g464300 34.71 LOC25492001 stigma-specific STIG1-like protein 1 25492001 MTR_4g044463 33.91 LOC25486307 uncharacterized LOC25486307 25486307 MTR_2g030835 32.53 LOC25487914 probable peroxidase 26 25487914 MTR_2g099175 30.77 LOC25498390 albumin-1 B 25498390 MTR_7g056803 29.88 LOC25498392 albumin-1 D 25498392 MTR_7g056817 29.74 LOC25480075 cytochrome P450 71D11 25480075 MTR_0059s0170 29.68 LOC11446164 uncharacterized LOC11446164 11446164 MTR_4g039740 29.68 LOC25491835 pectinesterase inhibitor 4 25491835 MTR_4g035855 28.88 LOC25495425 UDP-arabinopyranose mutase 1 25495425 MTR_6g015905 27.66 LOC11417173 alcohol-forming fatty acyl-CoA reductase 11417173 MTR_6g034620 27.45 LOC11441883 uncharacterized LOC11441883 11441883 MTR_2g021580 27.19 LOC112421167 BURP domain-containing protein 2-like 112421167 26.74 LOC25502900 L-ascorbate oxidase homolog 25502900 MTR_8g479380 26.55 LOC112417068 uncharacterized LOC112417068 112417068 26.48 LOC25490501 transcription factor PRE3 25490501 MTR_3g438070 26.16 LOC11406339 D-inositol 3-phosphate glycosyltransferase 11406339 MTR_5g026360 25.91 LOC11422393 pectinesterase 11422393 MTR_3g008640 25.41 LOC120577097 polygalacturonase-like 120577097 24.99 LOC25492470 cytochrome P450 93B16 25492470 MTR_4g062500 24.89 LOC11417231 expansin-A11 11417231 MTR_1g026020 24.74 LOC11407251 pectinesterase 11407251 MTR_3g033690 24.72 LOC11411483 chalcone synthase 1A 11411483 MTR_3g086260 24.51 LOC25486306 spore coat protein SP70 25486306 MTR_2g030825 24.47 LOC25483888 uncharacterized LOC25483888 25483888 24.29 LOC11431564 probable polygalacturonase At1g80170 11431564 MTR_2g103650 24.17 LOC25492599 DNA damage-repair/toleration protein DRT100 25492599 MTR_4g065850 23.84 LOC25486308 uncharacterized LOC25486308 25486308 MTR_2g030845 23.79 LOC11434735 protein BEARSKIN1 11434735 MTR_4g035590 23.58 LOC25498435 LRR receptor-like serine/threonine-protein kinase RCH1 25498435 MTR_7g059285 23.33 LOC11440205 14 kDa proline-rich protein DC2.15 11440205 MTR_4g108150 23.28 LOC25483614 probable pectinesterase/pectinesterase inhibitor 7 25483614 MTR_1g054880 23.11 LOC25492744 BURP domain-containing protein 9 25492744 MTR_4g069550 23.11 LOC25493257 pathogenesis-related protein 1B 25493257 MTR_4g092515 22.88 LOC11423703 N-acetyl-alpha-D-glucosaminyl L-malate synthase 11423703 MTR_8g068840 22.87 LOC25500854 ferric reduction oxidase 2 25500854 MTR_8g028795 22.52 LOC11408200 uncharacterized acetyltransferase At3g50280 11408200 MTR_3g070170 22.51 LOC11410524 pectinesterase 11410524 MTR_3g008720 22.50 LOC25488202 peroxidase 7 25488202 MTR_2g437770 22.44 LOC11436768 uncharacterized LOC11436768 11436768 MTR_7g083110 22.37 LOC11441906 uncharacterized LOC11441906 11441906 MTR_4g039680 22.09 LOC11414455 protein SEED AND ROOT HAIR PROTECTIVE PROTEIN 11414455 MTR_1g088130 22.06 LOC25502704 protein FEZ 25502704 MTR_8g467490 21.82 LOC25487034 serine/threonine-protein kinase WAG1 25487034 MTR_2g069990 21.80 LOC25487402 uncharacterized LOC25487402 25487402 MTR_2g080230 21.66 LOC11441775 uncharacterized LOC11441775 11441775 MTR_4g128310 21.66 LOC11419525 putative lipid-transfer protein DIR1 11419525 MTR_3g055250 21.48 LOC11414212 transcription factor RSL2 11414212 MTR_1g018090 21.42 LOC11434807 uncharacterized LOC11434807 11434807 MTR_7g017380 21.17 LOC11414449 AP2-like ethylene-responsive transcription factor PLT2 11414449 MTR_4g065370 21.06 LOC11419346 chalcone synthase 5 11419346 MTR_2g058470 20.82 LOC25489753 basic blue protein 25489753 MTR_3g089005 20.76 LOC11413997 fasciclin-like arabinogalactan protein 12 11413997 MTR_2g093970 20.53 LOC11411604 uncharacterized LOC11411604 11411604 MTR_3g116950 20.43 LOC120577381 terpene synthase 10-like 120577381 20.29 LOC11436357 protein CENTRORADIALIS-like 11436357 MTR_7g104460 20.08 LOC25491724 cationic peroxidase 1 25491724 MTR_4g029190 20.03 LOC25498651 laccase-7 25498651 MTR_7g065970 20.00 LOC25493635 expansin-A18 25493635 MTR_4g102450 19.97 LOC25494354 START domain-containing protein 10 25494354 MTR_4g134400 19.85 LOC25484847 leghemoglobin 29 25484847 MTR_1g090820 19.83 LOC11411145 senescence associated gene 20 11411145 MTR_7g071790 19.76 LOC11426261 probable mannitol dehydrogenase 11426261 MTR_5g031290 19.70 LOC11420203 chitinase 2 11420203 MTR_6g079630 19.45 LOC11406538 cationic peroxidase 1 11406538 MTR_5g074710 19.44 LOC11407498 probable pectinesterase/pectinesterase inhibitor 41 11407498 MTR_1g083520 19.44 LOC11416259 probable glutathione S-transferase 11416259 MTR_1g090090 19.39 LOC11438975 carotenoid cleavage dioxygenase 7, chloroplastic 11438975 MTR_7g045370 19.23 LOC11444647 transcription factor MYB106 11444647 MTR_4g082230 19.18 LOC25496414 albumin-1 25496414 MTR_6g047900 19.08 LOC25479596 beta-amyrin synthase 25479596 MTR_0013s0230 19.05 LOC112416104 disease resistance protein RUN1-like 112416104 19.02 LOC25483021 zinc finger protein 11 25483021 MTR_1g044225 18.93 LOC11443067 probable copper-transporting ATPase HMA5 11443067 MTR_5g010420 18.84 LOC11408730 fasciclin-like arabinogalactan protein 11 11408730 MTR_4g059780 18.83 LOC25483020 ethylene receptor 2 25483020 MTR_1g044210 18.62 LOC11439493 probable xyloglucan galactosyltransferase GT20 11439493 MTR_5g010370 18.54 LOC25486919 terpene synthase 10 25486919 MTR_2g064425 18.41 LOC11405576 protein GRIM REAPER 11405576 MTR_2g085370 18.38 LOC11422621 basic blue protein 11422621 MTR_8g088830 18.37 LOC11411662 putative disease resistance RPP13-like protein 1 11411662 MTR_3g019040 18.22 LOC11412280 probable pectinesterase/pectinesterase inhibitor 7 11412280 MTR_0458s0030 18.09 LOC11409671 uncharacterized LOC11409671 11409671 18.05 LOC112416394 uncharacterized LOC112416394 112416394 17.94 LOC11417770 pyruvate, phosphate dikinase, chloroplastic 11417770 MTR_4g118350 17.93 LOC25486210 putative pectate lyase 2 25486210 MTR_2g023990 17.90 LOC25481099 probable pectinesterase/pectinesterase inhibitor 7 25481099 MTR_0458s0010 17.88 LOC11443417 uncharacterized LOC11443417 11443417 MTR_4g048060 17.82 LOC112419947 QWRF motif-containing protein 7 112419947 MTR_3g408360 17.68 LOC11430026 short-chain dehydrogenase reductase 3b 11430026 MTR_7g110140 17.59 NGR Protein NEGATIVE GRAVITROPIC RESPONSE OF ROOTS 25500557 MTR_8g021237 17.59 LOC25484218 cellulose synthase A catalytic subunit 4 [UDP-forming] 25484218 MTR_1g069605 17.45 LOC11419921 auxin-binding protein ABP19b 11419921 MTR_8g020610 17.43 LOC112419946 WAT1-related protein At1g70260-like 112419946 17.23 LOC25479563 uncharacterized LOC25479563 25479563 MTR_0010s0400 17.14 LOC25486139 uncharacterized LOC25486139 25486139 MTR_2g022960 17.10 LOC11409765 1-aminocyclopropane-1-carboxylate oxidase homolog 1 11409765 MTR_2g069300 17.10 LOC11410110 probable O-methyltransferase 3 11410110 MTR_5g074680 17.03	Upper 100 Genes Symbol Function* Entrez Gene ID* Other ID PC LOC11410708 cellulose synthase A catalytic subunit 7 [UDP-forming] 11410708 MTR_8g063270 28.45 LOC11445733 fasciclin-like arabinogalactan protein 11 11445733 MTR_4g053380 28.33 LOC11422537 GDSL esterase/lipase At5g33370 11422537 MTR_6g021530 27.88 LOC11438309 fasciclin-like arabinogalactan protein 12 11438309 MTR_2g017960 27.49 LOC11406450 fasciclin-like arabinogalactan protein 12 11406450 MTR_4g059790 27.44 LOC25492621 linoleate 13S-lipoxygenase 2-1, chloroplastic 25492621 MTR_4g066170 26.37 LOC11405460 rhamnogalacturonate lyase B 11405460 MTR_5g031170 26.12 LOC25488436 COBRA-like protein 4 25488436 MTR_2g462000 26.07 LOC11416968 S-adenosyl-L-methionine:benzoic acid/salicylic acid carboxyl methyltransferase 3 11416968 MTR_5g020940 26.07 LOC11442920 fasciclin-like arabinogalactan protein 11 11442920 MTR_2g017950 26.01 LOC11408730 fasciclin-like arabinogalactan protein 11 11408730 MTR_4g059780 25.59 LOC120575835 chitinase 2-like 120575835 25.57 LOC25481081 chitinase 2 25481081 MTR_0443s0040 25.03 LOC11436386 fasciclin-like arabinogalactan protein 11 11436386 MTR_2g093980 24.87 LOC25501502 proline-rich extensin-like protein EPR1 25501502 MTR_8g069925 24.86 LOC11434652 protein ECERIFERUM 2 11434652 MTR_7g114960 24.65 LOC25487263 protein IQ-DOMAIN 1 25487263 MTR_2g078210 24.35 LOC11427580 cycloartenol synthase-like 11427580 23.73 LOC11414214 beta-galactosidase 11414214 MTR_1g018200 23.53 LOC25491738 repetitive proline-rich cell wall protein 25491738 MTR_4g029730 23.50 LOC25498751 GDSL esterase/lipase CPRD49 25498751 MTR_7g068550 23.48 LOC25482703 peptidyl-prolyl cis-trans isomerase CYP21-4 25482703 MTR_1g035360 23.45 LOC11422205 probable 2-oxoglutarate-dependent dioxygenase AOP1 11422205 MTR_7g090520 23.38 LOC25491018 peroxidase 4 25491018 MTR_3g466200 23.37 LOC25484218 cellulose synthase A catalytic subunit 4 [UDP-forming] 25484218 MTR_1g069605 23.27 LOC11413997 fasciclin-like arabinogalactan protein 12 11413997 MTR_2g093970 23.25 LOC11437117 2-oxoglutarate-dependent dioxygenase 19 11437117 MTR_5g065010 23.20 LOC11419467 peroxidase A2 11419467 MTR_7g093370 23.10 LOC11412840 protein ALTERED XYLOGLUCAN 4 11412840 MTR_5g035150 22.98 LOC11443053 non-specific lipid transfer protein GPI-anchored 1 11443053 MTR_3g085210 22.94 LOC11422753 probable sugar phosphate/phosphate translocator At3g11320 11422753 MTR_4g018760 22.61 LOC11427529 beta-glucosidase 12 11427529 MTR_7g051610 22.61 LOC11430604 non-specific lipid-transfer protein 4 11430604 MTR_4g029390 22.60 LOC11412160 dirigent protein 19 11412160 MTR_7g070390 22.56 LOC11407997 WEB family protein At1g12150 11407997 MTR_2g027130 22.40 LOC25483924 uncharacterized isomerase BH0283 25483924 MTR_1g062540 22.39 LOC11426443 uncharacterized LOC11426443 11426443 22.15 LOC11415872 fasciclin-like arabinogalactan protein 11 11415872 MTR_8g087460 22.15 LOC25484703 uncharacterized LOC25484703 25484703 MTR_1g084200 22.14 LOC25500428 GTP cyclohydrolase 1 25500428 MTR_8g016030 22.08 LOC11445857 fasciclin-like arabinogalactan protein 12 11445857 MTR_2g017970 21.99 LOC25497250 dehydration-responsive element-binding protein 1E 25497250 MTR_6g465690 21.92 LOC11431025 vicianin hydrolase 11431025 MTR_3g026620 21.77 LOC25485501 3-ketoacyl-CoA synthase 6 25485501 MTR_1g110930 21.60 LOC112422543 uncharacterized LOC112422543 112422543 21.57 LOC11411870 protein IWS1 homolog 11411870 MTR_3g034640 21.39 LOC11419138 argininosuccinate synthase, chloroplastic 11419138 MTR_3g088970 21.36 LOC11421015 UDP-glucose flavonoid 3-O-glucosyltransferase 7 11421015 MTR_7g012120 21.29 LOC25482166 ornithine carbamoyltransferase, chloroplastic 25482166 MTR_1g022420 21.18 LOC25485488 zinc finger protein JAGGED 25485488 MTR_1g110710 21.11 LOC11419449 isoliquiritigenin 2'-O-methyltransferase 11419449 MTR_7g012090 21.01 LOC25482358 spermine synthase 25482358 MTR_1g028360 20.93 LOC25492907 leucine-rich repeat extensin-like protein 4 25492907 MTR_4g078535 20.68 LOC25499201 phospholipase A1-Igamma2, chloroplastic-like 25499201 MTR_1995s0010 20.61 LOC25489140 uncharacterized LOC25489140 25489140 MTR_3g058890 20.52 LOC11417148 7-deoxyloganetin glucosyltransferase 11417148 MTR_6g013990 20.36 LOC120579430 cytochrome P450 71D11-like 120579430 20.31 LOC11411180 inositol-3-phosphate synthase 11411180 MTR_8g091320 20.27 LOC11436565 probable WRKY transcription factor 40 11436565 MTR_1g013760 20.21 LOC11438895 beta-glucosidase 12 11438895 MTR_7g051510 20.20 LOC11410793 phenylacetaldehyde reductase 11410793 MTR_3g031650 20.18 LOC11411933 probable mannitol dehydrogenase 11411933 MTR_5g031360 19.93 LOC11406870 probable xyloglucan endotransglucosylase/hydrolase protein 6 11406870 MTR_4g097700 19.81 LOC25490122 bark storage protein A 25490122 MTR_3g110172 19.74 LOC11408001 fasciclin-like arabinogalactan protein 12 11408001 MTR_4g059840 19.70 LOC25500069 patatin-like protein 4 25500069 MTR_8g007065 19.62 LOC11441561 soyasaponin III rhamnosyltransferase 11441561 MTR_6g042310 19.59 LOC11434104 GDSL esterase/lipase At4g26790 11434104 MTR_5g084750 19.56 LOC25495596 albumin-1 25495596 MTR_6g017150 19.53 LOC25494359 UDP-glucose 4-epimerase GEPI42 25494359 MTR_4g134490 19.31 LOC25488733 vicianin hydrolase 25488733 MTR_3g026400 19.24 LOC11418858 uncharacterized LOC11418858 11418858 MTR_1g038260 19.19 LOC25480289 indole-3-acetic acid-amido synthetase GH3.10 25480289 MTR_0102s0060 19.05 LOC11433059 uncharacterized LOC11433059 11433059 MTR_2g101980 19.03 LOC25500523 uncharacterized LOC25500523 25500523 MTR_8g019450 18.90 LOC11444044 aquaporin SIP1-2 11444044 MTR_4g049340 18.83 LOC11417970 protein ECERIFERUM 26-like 11417970 MTR_8g081480 18.82 LOC11445287 cytosolic sulfotransferase 12 11445287 MTR_8g066220 18.79 LOC25497021 probable cation transporter HKT6 25497021 MTR_6g092940 18.68 LOC25484775 monothiol glutaredoxin-S11 25484775 MTR_1g088925 18.60 LOC25489617 linoleate 9S-lipoxygenase 1 25489617 MTR_3g081130 18.59 LOC25490123 bark storage protein A 25490123 MTR_3g110175 18.56 LOC11438618 tubulin beta-1 chain 11438618 MTR_8g098360 18.56 LOC11440049 chalcone synthase 11440049 MTR_7g084300 18.34 LOC11408724 putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4 11408724 MTR_1g082880 18.27 LOC25501074 repetitive proline-rich cell wall protein 1-like 25501074 MTR_8g037933 18.24 LOC11415378 11-oxo-beta-amyrin 30-oxidase-like 11415378 MTR_8g042020 18.18 LOC11441028 nucleoside-triphosphatase 11441028 MTR_7g085150 18.15 LOC25497029 cycloartenol synthase-like 25497029 18.11 LOC25480356 putative expansin-B2 25480356 MTR_0118s0070 18.09 LOC25496061 ABC transporter C family member 10 25496061 MTR_6g034755 18.08 LOC25492436 UDP-xylose transporter 1 25492436 MTR_4g058860 18.05 LOC11408747 aquaporin TIP1-1 11408747 MTR_4g063090 17.96 LOC25494264 very-long-chain aldehyde decarbonylase CER3 25494264 MTR_4g129630 17.94 LOC25484774 monothiol glutaredoxin-S11 25484774 MTR_1g088920 17.83 LOC11433251 RING-H2 finger protein ATL54 11433251 MTR_5g064890 17.79 LOC11417071 transcription factor MYB11 11417071 MTR_1g087540 17.74 LOC11410968 glycerol-3-phosphate 2-O-acyltransferase 6 11410968 MTR_7g067380 17.70 LOC11431207 protein SIEVE ELEMENT OCCLUSION B 11431207 MTR_1g074990 17.60 LOC11428254 L-type lectin-domain containing receptor kinase IX.1 11428254 MTR_8g067720 17.59	Upper 100 Genes Symbol Function* Entrez Gene ID* Other ID PC LOC25483888 uncharacterized LOC25483888 25483888 25.95 LOC11409671 uncharacterized LOC11409671 11409671 25.33 LOC25485386 gallate 1-beta-glucosyltransferase 25485386 MTR_1g107285 24.98 LOC11437104 cytochrome P450 71D10 11437104 MTR_5g094550 24.60 LOC11432385 protein LATE ELONGATED HYPOCOTYL 11432385 MTR_7g118330 24.10 LOC11443027 cytochrome P450 94B3 11443027 MTR_3g080580 23.87 LOC11409052 cell wall / vacuolar inhibitor of fructosidase 1 11409052 MTR_4g122740 23.19 LOC25491235 B-box zinc finger protein 32 25491235 MTR_4g008050 23.11 LOC25489836 uncharacterized LOC25489836 25489836 MTR_3g094080 22.75 LOC11423831 protein LNK3 11423831 MTR_8g040640 21.92 LOC11424336 linoleate 9S-lipoxygenase 11424336 MTR_8g018650 21.83 LOC25491535 probable glutathione S-transferase 25491535 MTR_4g019790 21.74 LOC11422563 auxin efflux carrier component 5 11422563 MTR_7g079720 21.03 LOC25485135 early light-induced protein, chloroplastic 25485135 MTR_1g102800 20.69 LOC25483209 ethylene-responsive transcription factor RAP2-7 25483209 MTR_1g049140 20.55 LOC25484847 leghemoglobin 29 25484847 MTR_1g090820 20.32 LOC11421493 UDP-glycosyltransferase 73C6-like 11421493 20.19 LOC11406870 probable xyloglucan endotransglucosylase/hydrolase protein 6 11406870 MTR_4g097700 20.06 LOC11442454 protein NRT1/ PTR FAMILY 6.3 11442454 MTR_5g012290 19.80 LOC25485116 early light-induced protein, chloroplastic 25485116 MTR_1g102570 19.73 LOC11429129 protein DOG1-like 4 11429129 MTR_8g094690 19.66 LOC11431876 B-box zinc finger protein 24 11431876 MTR_2g099010 19.52 LOC11440049 chalcone synthase 11440049 MTR_7g084300 19.50 LOC11437642 chitinase 2 11437642 MTR_0062s0130 19.40 LOC11439629 chitinase 2 11439629 MTR_0062s0110 19.31 LOC11432858 pEARLI1-like lipid transfer protein 1 11432858 MTR_1g012710 19.19 LOC11440564 chitinase 2 11440564 MTR_0062s0170 19.09 LOC11410640 uncharacterized LOC11410640 11410640 MTR_7g067950 18.62 LOC25485134 early light-induced protein, chloroplastic 25485134 MTR_1g102780 18.34 LOC25485396 gallate 1-beta-glucosyltransferase 25485396 MTR_1g107340 18.33 LOC25496945 lachrymatory-factor synthase 25496945 MTR_6g088445 18.19 LOC11436482 uncharacterized LOC11436482 11436482 17.93 LOC11440459 pleiotropic drug resistance protein 1 11440459 MTR_7g098760 17.82 LOC112419946 WAT1-related protein At1g70260-like 112419946 17.52 LOC25497021 probable cation transporter HKT6 25497021 MTR_6g092940 17.44 LOC11416079 cyclic dof factor 1 11416079 MTR_5g041400 17.41 LOC120575834 leucine-rich repeat extensin-like protein 3 120575834 17.31 LOC11444027 fe(2+) transport protein 1 11444027 MTR_4g083570 16.90 LOC25502634 NAD(P)H dehydrogenase (quinone) FQR1 25502634 MTR_8g466030 16.78 LOC11434471 protein PROTON GRADIENT REGULATION 5, chloroplastic 11434471 MTR_1g045140 16.75 LOC11446105 uncharacterized LOC11446105 11446105 MTR_7g025130 16.71 LOC11426332 probable sesquiterpene synthase 11426332 MTR_2g082060 16.63 LOC11420565 VQ motif-containing protein 29 11420565 MTR_5g015190 16.34 LOC25492963 transcription factor MYB106 25492963 MTR_4g082290 16.19 LOC11436313 cysteine proteinase inhibitor B 11436313 MTR_3g084780 16.12 LOC11437530 glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic 11437530 MTR_7g084800 16.09 LOC25480656 albumin-2 25480656 MTR_0216s0030 16.05 LOC11444987 probable transcription factor GLK1 11444987 MTR_4g078810 16.04 LOC11427892 (S)-8-oxocitronellyl enol synthase CYC2 11427892 MTR_4g121570 16.04 LOC25484263 patellin-4 25484263 MTR_1g069915 16.00 LOC25492025 uncharacterized LOC25492025 25492025 15.93 LOC11416716 probable O-methyltransferase 3 11416716 MTR_5g074600 15.80 LOC25501341 carbonic anhydrase 2 25501341 MTR_8g064630 15.77 LOC11422591 ultraviolet-B receptor UVR8 11422591 MTR_3g069030 15.71 LOC11415453 probable xyloglucan endotransglucosylase/hydrolase protein 7 11415453 MTR_4g097640 15.67 LOC11445727 ferredoxin--nitrite reductase, chloroplastic 11445727 MTR_4g086020 15.62 LOC11440200 fructose-bisphosphate aldolase 1, chloroplastic 11440200 MTR_4g071880 15.60 LOC11446990 putative transcription factor bHLH107 11446990 MTR_4g087920 15.55 LOC11419130 photosystem II 22 kDa protein, chloroplastic 11419130 MTR_3g088040 15.41 LOC25490816 uncharacterized LOC25490816 25490816 MTR_3g462990 15.41 LOC11412707 G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 11412707 MTR_3g020230 15.41 LOC11436988 galactinol--sucrose galactosyltransferase 11436988 MTR_3g077280 15.34 LOC25495910 chlorophyll a-b binding protein 6, chloroplastic 25495910 MTR_6g033320 15.33 LOC11436721 phosphoglycolate phosphatase 1A, chloroplastic 11436721 MTR_7g080530 15.32 LOC11423112 probable 2-oxoglutarate-dependent dioxygenase SLC1 11423112 MTR_1g062110 15.30 LOC11439469 chalcone synthase 1B 11439469 MTR_3g083910 15.27 LOC11421034 small heat shock protein, chloroplastic-like 11421034 15.12 LOC25490580 phytoene synthase 2, chloroplastic 25490580 MTR_3g450510 15.12 LOC11434875 chlorophyll a-b binding protein 215, chloroplastic 11434875 MTR_5g097280 15.07 LOC11412181 uncharacterized LOC11412181 11412181 15.04 LOC11426537 1-aminocyclopropane-1-carboxylate synthase 1 11426537 MTR_7g079080 14.89 LOC25488098 bidirectional sugar transporter SWEET17 25488098 MTR_2g436310 14.87 LOC25487367 CBS domain-containing protein CBSX5 25487367 MTR_2g079650 14.76 LOC11417180 probable protein phosphatase 2C 72 11417180 MTR_1g016620 14.72 LOC25489098 uncharacterized LOC25489098 25489098 MTR_3g058320 14.68 LOC25490930 probable protein phosphatase 2C 25 25490930 MTR_3g464700 14.67 LOC11418861 peroxidase 5 11418861 MTR_1g038680 14.67 LOC120579648 protein LNK2 120579648 14.66 LOC11422542 putative calcium-binding protein CML23 11422542 MTR_6g023460 14.62 LOC25485387 cytochrome P450 93B16 25485387 MTR_1g107295 14.60 LOC11433021 uncharacterized LOC11433021 11433021 MTR_5g092340 14.59 LOC11431390 photosystem I chlorophyll a/b-binding protein 5, chloroplastic 11431390 MTR_3g101670 14.53 LOC11428833 probable disease resistance protein At1g61310 11428833 MTR_5g092310 14.45 LOC11434140 albumin-2 11434140 MTR_1g066530 14.43 LOC25493429 polygalacturonase At1g48100 25493429 MTR_4g094715 14.42 LOC11427218 protein FAF-like, chloroplastic 11427218 MTR_2g087430 14.42 LOC11446925 disease resistance protein RPV1 11446925 MTR_8g032420 14.41 LOC11426744 phytoene synthase 2, chloroplastic 11426744 MTR_5g090780 14.39 LOC11426956 probable lysophospholipase BODYGUARD 4 11426956 MTR_7g087070 14.39 LOC25492416 high-affinity nitrate transporter 2.1 25492416 MTR_4g057890 14.35 LOC120577432 disease resistance protein RPV1-like 120577432 14.34 LOC11417464 indole-3-acetic acid-induced protein ARG2 11417464 MTR_1g088230 14.31 LOC11433653 uncharacterized LOC11433653 11433653 MTR_5g077710 14.16 LOC11427714 thioredoxin H2 11427714 MTR_5g037890 14.14 LOC25491367 probable 2-oxoglutarate-dependent dioxygenase AOP1 25491367 MTR_4g011690 14.14 LOC11431735 ammonium transporter 1 member 2 11431735 MTR_1g079760 14.13 LOC11416193 NADPH:quinone oxidoreductase 11416193 MTR_3g019090 14.10 LOC11435069 glycine-rich cell wall structural protein 1.8 11435069 MTR_5g030340 13.93 LOC25492579 extensin-2-like 25492579 13.92 LOC25492573 extensin-2 25492573 MTR_4g065060 13.92
Lower 100 Genes Symbol Function* Entrez Gene ID* Other ID PC LOC11443541 uncharacterized LOC11443541 11443541 MTR_3g055450 -61.03 LOC11435509 leghemoglobin 1-like 11435509 MTR_5g066070 -60.86 LOC11427761 leghemoglobin 11427761 MTR_5g041610 -59.38 LOC11406606 leghemoglobin-3 11406606 MTR_5g081000 -59.09 LOC25483217 leghemoglobin 29 25483217 MTR_1g049330 -58.43 LOC11428277 nodulin-25 11428277 MTR_3g055440 -58.42 LOC25497150 uncharacterized LOC25497150 25497150 -58.37 LOC25480034 uncharacterized LOC25480034 25480034 -58.30 LOC11420609 uncharacterized LOC11420609 11420609 MTR_3g016020 -58.27 LOC25488595 uncharacterized LOC25488595 25488595 -58.02 LOC120575893 uncharacterized LOC120575893 120575893 -57.48 LOC120580298 uncharacterized LOC120580298 120580298 -57.27 LOC25485857 uncharacterized LOC25485857 25485857 -57.22 LOC11434960 uncharacterized LOC11434960 11434960 -57.21 LOC25487011 uncharacterized LOC25487011 25487011 MTR_2g069283 -57.15 LOC120580600 uncharacterized LOC120580600 120580600 -57.12 LOC11433189 leghemoglobin-1 11433189 MTR_5g080400 -56.97 LOC25497056 uncharacterized LOC25497056 25497056 -56.94 LOC25480907 uncharacterized LOC25480907 25480907 -56.81 LOC11446872 uncharacterized LOC11446872 11446872 -56.69 LOC11444438 5'-3' exoribonuclease 2 11444438 MTR_2g042470 -56.65 LOC25487188 uncharacterized LOC25487188 25487188 -56.64 LOC11406056 uncharacterized LOC11406056 11406056 -56.45 LOC25497111 uncharacterized LOC25497111 25497111 -56.44 LOC120580896 uncharacterized LOC120580896 120580896 -56.40 LOC25497055 uncharacterized LOC25497055 25497055 -56.24 LOC112422553 uncharacterized LOC112422553 112422553 -56.21 LOC11446830 uncharacterized LOC11446830 11446830 -56.02 LOC25496298 uncharacterized LOC25496298 25496298 -55.98 LOC120580668 uncharacterized LOC120580668 120580668 -55.94 LOC11417609 neurofilament medium polypeptide 11417609 MTR_5g044140 -55.90 LOC11436952 uncharacterized LOC11436952 11436952 -55.89 LOC25497095 uncharacterized LOC25497095 25497095 -55.65 LOC120576145 uncharacterized LOC120576145 120576145 -55.64 LOC25486591 uncharacterized LOC25486591 25486591 -55.61 LOC11426411 uncharacterized LOC11426411 11426411 MTR_4g059900 -55.59 LOC120579687 uncharacterized LOC120579687 120579687 -55.57 LOC25489753 basic blue protein 25489753 MTR_3g089005 -55.31 LOC11427889 uncharacterized LOC11427889 11427889 -55.29 LOC11428958 leghemoglobin 11428958 MTR_5g080440 -55.26 LOC11417936 uncharacterized LOC11417936 11417936 -55.20 LOC11405967 probable polyol transporter 3 11405967 MTR_5g019870 -54.95 LOC25490729 uncharacterized LOC25490729 25490729 MTR_3g460850 -54.90 LOC11410665 uncharacterized LOC11410665 11410665 -54.76 LOC11433030 uncharacterized LOC11433030 11433030 -54.74 LOC25497276 uncharacterized LOC25497276 25497276 -54.72 LOC120579751 uncharacterized LOC120579751 120579751 -54.70 LOC25481199 uncharacterized LOC25481199 25481199 -54.66 LOC25502568 uncharacterized LOC25502568 25502568 -54.60 LOC11421142 uncharacterized LOC11421142 11421142 -54.53 LOC25496194 uncharacterized LOC25496194 25496194 -54.45 LOC11408265 uncharacterized LOC11408265 11408265 -54.34 LOC25483055 uncharacterized LOC25483055 25483055 -54.31 LOC120575956 uncharacterized LOC120575956 120575956 -54.30 LOC25489162 uncharacterized LOC25489162 25489162 -54.24 LOC25480712 uncharacterized LOC25480712 25480712 -54.22 LOC120578088 uncharacterized LOC120578088 120578088 -54.16 LOC11440669 ctenidin-3 11440669 MTR_2g042510 -54.13 LOC25488580 uncharacterized LOC25488580 25488580 -54.13 LOC11445664 uncharacterized LOC11445664 11445664 -54.08 LOC11435606 uncharacterized LOC11435606 11435606 -54.07 LOC11434719 uncharacterized LOC11434719 11434719 -54.05 LOC120575759 uncharacterized LOC120575759 120575759 -53.95 LOC11412955 uncharacterized LOC11412955 11412955 MTR_4g065510 -53.92 LOC11443689 uncharacterized LOC11443689 11443689 -53.91 LOC11424741 uncharacterized LOC11424741 11424741 -53.89 LOC11440663 uncharacterized LOC11440663 11440663 -53.80 LOC120575959 uncharacterized LOC120575959 120575959 -53.65 LOC25500977 uncharacterized LOC25500977 25500977 -53.64 LOC25492500 uncharacterized LOC25492500 25492500 -53.63 LOC25479848 uncharacterized LOC25479848 25479848 -53.61 LOC11409375 uncharacterized LOC11409375 11409375 -53.56 LOC120579724 uncharacterized LOC120579724 120579724 -53.54 LOC11420749 uncharacterized LOC11420749 11420749 MTR_5g084260 -53.41 LOC25492620 uncharacterized LOC25492620 25492620 -53.32 LOC112421965 uncharacterized LOC112421965 112421965 -53.32 LOC120580585 uncharacterized LOC120580585 120580585 -53.26 LOC112419996 uncharacterized LOC112419996 112419996 -53.23 LOC11415390 uncharacterized LOC11415390 11415390 -53.23 LOC25486592 uncharacterized LOC25486592 25486592 -53.19 LOC112422555 uncharacterized LOC112422555 112422555 -53.16 LOC25497143 uncharacterized LOC25497143 25497143 -53.15 LOC11421445 uncharacterized LOC11421445 11421445 -53.15 LOC112421187 uncharacterized LOC112421187 112421187 -53.12 LOC11418938 uncharacterized LOC11418938 11418938 -53.11 LOC25480896 uncharacterized LOC25480896 25480896 -53.10 LOC112421017 uncharacterized LOC112421017 112421017 -53.07 LOC11412368 uncharacterized LOC11412368 11412368 -53.04 LOC11433347 leghemoglobin 2-like 11433347 MTR_1g011540 -53.03 LOC25495157 uncharacterized LOC25495157 25495157 -53.02 LOC120577155 uncharacterized LOC120577155 120577155 -53.01 LOC25496606 uncharacterized LOC25496606 25496606 MTR_6g066090 -53.01 LOC11423000 uncharacterized LOC11423000 11423000 -53.00 LOC25480714 uncharacterized LOC25480714 25480714 -52.99 LOC25479410 uncharacterized LOC25479410 25479410 -52.94 LOC25489059 calmodulin 25489059 MTR_3g055585 -52.89 LOC11406655 uncharacterized LOC11406655 11406655 -52.88 LOC25497604 uncharacterized LOC25497604 25497604 MTR_7g016060 -52.86 LOC11439945 uncharacterized LOC11439945 11439945 -52.85 LOC25496211 uncharacterized LOC25496211 25496211 -52.85	Lower 100 Genes Symbol Function* Entrez Gene ID* Other ID PC LOC25501143 MLP-like protein 28 25501143 MTR_8g045555 -50.63 LOC11413892 extensin-2 11413892 MTR_1g088110 -42.06 LOC11415340 probable caffeine synthase MTL2 11415340 MTR_3g117060 -40.80 LOC11422621 basic blue protein 11422621 MTR_8g088830 -38.15 LOC25488202 peroxidase 7 25488202 MTR_2g437770 -36.35 LOC11430669 non-classical arabinogalactan protein 30 11430669 MTR_7g102770 -34.87 LOC11445454 glucan endo-1,3-beta-glucosidase 11445454 MTR_4g076430 -34.52 LOC25493635 expansin-A18 25493635 MTR_4g102450 -34.43 LOC25501130 putative pectinesterase/pectinesterase inhibitor 24 25501130 MTR_8g042900 -34.43 LOC25482876 benzyl alcohol O-benzoyltransferase 25482876 MTR_1g040315 -34.43 LOC25491724 cationic peroxidase 1 25491724 MTR_4g029190 -34.39 LOC25496303 peroxidase 12 25496303 MTR_6g043460 -33.54 LOC11433452 aquaporin TIP2-1 11433452 MTR_2g101370 -33.45 LOC25495384 probable caffeine synthase MTL2 25495384 MTR_6g015620 -32.51 LOC25500069 patatin-like protein 4 25500069 MTR_8g007065 -32.51 LOC11439576 peroxidase 7 11439576 MTR_4g133800 -32.31 LOC11439496 probable xyloglucan endotransglucosylase/hydrolase protein 26 11439496 MTR_6g088320 -31.80 LOC11419442 putative pectinesterase/pectinesterase inhibitor 24 11419442 MTR_3g010780 -31.77 LOC11446507 uncharacterized LOC11446507 11446507 MTR_8g069350 -30.40 LOC25486210 putative pectate lyase 2 25486210 MTR_2g023990 -30.39 LOC11410247 disease resistance response protein DRRG49-C 11410247 MTR_2g035120 -30.11 LOC25483614 probable pectinesterase/pectinesterase inhibitor 7 25483614 MTR_1g054880 -29.76 LOC112419947 QWRF motif-containing protein 7 112419947 MTR_3g408360 -29.74 LOC25487769 adenylate-forming reductase 06235 25487769 MTR_2g091155 -29.63 LOC11408464 sugar transporter ERD6-like 16 11408464 MTR_4g118610 -29.47 LOC25490897 probable terpene synthase 2 25490897 MTR_3g464190 -29.32 LOC11433261 cytochrome P450 71D11 11433261 MTR_5g095290 -29.24 LOC11439569 putative pectate lyase 2 11439569 MTR_4g132460 -28.80 LOC11429451 linoleate 9S-lipoxygenase 11429451 MTR_8g018510 -28.67 LOC25487405 uncharacterized LOC25487405 25487405 MTR_2g080260 -28.59 LOC25488192 uncharacterized LOC25488192 25488192 MTR_2g437600 -27.97 LOC11437825 exocyst complex component EXO70B1 11437825 MTR_7g026630 -27.95 LOC11426011 cytochrome P450 71D11 11426011 MTR_5g095260 -27.87 LOC25492470 cytochrome P450 93B16 25492470 MTR_4g062500 -27.75 LOC11411376 non-classical arabinogalactan protein 30 11411376 MTR_3g071470 -27.68 LOC11425128 UBX domain-containing protein 4 11425128 MTR_2g008010 -27.65 LOC11411570 non-classical arabinogalactan protein 30 11411570 MTR_4g017240 -27.45 LOC11438555 albumin-1 11438555 MTR_7g044980 -27.34 LOC25500973 scopoletin glucosyltransferase 25500973 MTR_8g032950 -27.30 LOC11437104 cytochrome P450 71D10 11437104 MTR_5g094550 -27.01 LOC25496866 cytochrome P450 CYP736A12 25496866 MTR_6g084770 -26.98 LOC11446096 uncharacterized LOC11446096 11446096 MTR_2g017800 -26.91 LOC11421317 protein MIZU-KUSSEI 1 11421317 MTR_8g040690 -26.89 LOC11434665 hevamine-A 11434665 MTR_7g116850 -26.55 LOC11446962 probable receptor-like protein kinase At4g39110 11446962 MTR_8g037700 -26.16 LOC11436805 expansin-A7 11436805 MTR_5g011210 -25.90 LOC11414455 protein SEED AND ROOT HAIR PROTECTIVE PROTEIN 11414455 MTR_1g088130 -25.58 LOC25502171 uncharacterized LOC25502171 25502171 MTR_8g099365 -25.33 LOC11414212 transcription factor RSL2 11414212 MTR_1g018090 -25.20 LOC25495878 xyloglucan endotransglucosylase/hydrolase protein A 25495878 MTR_6g033055 -25.20 LOC11440205 14 kDa proline-rich protein DC2.15 11440205 MTR_4g108150 -24.79 LOC25499610 pectinesterase 25499610 MTR_7g108900 -24.58 LOC120580864 probable terpene synthase 2 120580864 -24.37 LOC11427376 cytochrome P450 71D10 11427376 MTR_5g094540 -24.33 LOC11412280 probable pectinesterase/pectinesterase inhibitor 7 11412280 MTR_0458s0030 -24.30 LOC120575865 probable terpene synthase 2 120575865 -24.27 LOC120575943 probable terpene synthase 2 120575943 -24.21 LOC11438168 kunitz-type trypsin inhibitor-like 1 protein 11438168 MTR_6g059650 -24.16 LOC11432445 kunitz-type elastase inhibitor BrEI 11432445 MTR_3g106620 -24.11 LOC120580901 soyasaponin III rhamnosyltransferase-like 120580901 -24.00 LOC25480516 probable acyl-activating enzyme 5, peroxisomal 25480516 MTR_0161s0050 -23.96 LOC25500355 probable LRR receptor-like serine/threonine-protein kinase At1g05700 25500355 MTR_8g014970 -23.79 LOC120575864 probable terpene synthase 2 120575864 -23.69 LOC11417090 probable pectinesterase/pectinesterase inhibitor 7 11417090 MTR_1g088020 -23.66 LOC120575944 probable terpene synthase 2 120575944 -23.65 LOC25481099 probable pectinesterase/pectinesterase inhibitor 7 25481099 MTR_0458s0010 -23.62 LOC11413029 soyasaponin III rhamnosyltransferase 11413029 MTR_6g036650 -23.28 LOC25490854 kunitz-type trypsin inhibitor-like 2 protein 25490854 MTR_3g463590 -23.07 LOC11442751 pathogenesis-related thaumatin-like protein 3.5 11442751 MTR_8g075550 -23.01 LOC11429452 linoleate 9S-lipoxygenase 11429452 MTR_8g018520 -22.92 LOC11416259 probable glutathione S-transferase 11416259 MTR_1g090090 -22.88 LOC11407498 probable pectinesterase/pectinesterase inhibitor 41 11407498 MTR_1g083520 -22.61 LOC25486182 glycine-rich cell wall structural protein 1 25486182 MTR_2g023620 -22.51 LOC25496631 uncharacterized protein At1g24485 25496631 MTR_6g071455 -22.42 LOC120575908 FHA domain-containing protein FhaA-like 120575908 -22.21 LOC11426763 pEARLI1-like lipid transfer protein 1 11426763 MTR_3g106750 -22.13 LOC11425580 abscisic acid and environmental stress-inducible protein 11425580 MTR_5g084570 -22.02 LOC11432560 non-specific lipid-transfer protein 2 11432560 MTR_7g073030 -21.87 LOC25482377 arabinogalactan protein 41 25482377 MTR_1g028610 -21.83 LOC25484751 probable pectinesterase/pectinesterase inhibitor 7 25484751 MTR_1g088225 -21.61 LOC120575774 probable pectinesterase/pectinesterase inhibitor 7 120575774 -21.61 LOC120576881 probable terpene synthase 2 120576881 -21.40 LOC25482636 GEM-like protein 4 25482636 MTR_1g033750 -21.32 LOC120576874 probable terpene synthase 2 120576874 -21.22 LOC11446093 protein HIGH ARSENIC CONTENT 1, mitochondrial 11446093 MTR_2g017630 -21.18 LOC25487175 uncharacterized LOC25487175 25487175 MTR_2g073020 -21.17 LOC25495881 xyloglucan endotransglucosylase/hydrolase protein A 25495881 MTR_6g033085 -20.84 LOC25501073 UPF0481 protein At3g47200 25501073 MTR_8g037923 -20.70 LOC25481245 caffeic acid 3-O-methyltransferase 25481245 MTR_0591s0010 -20.63 LOC11442830 endoglucanase 5 11442830 MTR_4g074960 -20.51 LOC11421208 acid phosphatase 1 11421208 MTR_1g045120 -20.48 LOC11426938 formyltetrahydrofolate deformylase 1, mitochondrial 11426938 MTR_5g012850 -20.44 LOC25479709 cytochrome P450 736A117 25479709 MTR_0022s0290 -20.43 LOC11408556 uncharacterized LOC11408556 11408556 MTR_7g060420 -20.32 LOC25483919 type-1 glutamine synthetase 1 25483919 MTR_1g062470 -20.26 LOC25498399 probable terpene synthase 2 25498399 MTR_7g057390 -20.16 LOC11416220 transcription factor bHLH139 11416220 MTR_1g106460 -20.15 LOC25483924 uncharacterized isomerase BH0283 25483924 MTR_1g062540 -20.10 LOC11440124 transcription factor bHLH84 11440124 MTR_5g005110 -19.99 LOC25496855 dehydrin DHN1 25496855 MTR_6g084640 -19.90	Lower 100 Genes Symbol Function* Entrez Gene ID* Other ID PC LOC11412336 phosphoribulokinase, chloroplastic 11412336 MTR_5g027530 -48.51 LOC25489836 uncharacterized LOC25489836 25489836 MTR_3g094080 -44.75 LOC25492706 protein TIC 62, chloroplastic 25492706 MTR_4g068970 -44.09 LOC11408199 sedoheptulose-1,7-bisphosphatase, chloroplastic 11408199 MTR_3g070100 -43.80 LOC25497418 ribulose bisphosphate carboxylase small chain 3A, chloroplastic 25497418 -43.78 LOC25499634 chloroplast stem-loop binding protein of 41 kDa b, chloroplastic 25499634 MTR_7g111860 -43.48 LOC25497424 ribulose bisphosphate carboxylase small chain 3A, chloroplastic 25497424 MTR_7g007210 -43.09 LOC112416064 ribulose bisphosphate carboxylase small chain 3A, chloroplastic 112416064 -42.89 LOC25495304 chlorophyll a-b binding protein of LHCII type 1 25495304 MTR_6g011870 -42.80 LOC25497422 ribulose bisphosphate carboxylase small chain 3A, chloroplastic 25497422 MTR_7g007200 -42.74 LOC112418287 protein TSS 112418287 -42.57 LOC11412272 calvin cycle protein CP12-2, chloroplastic 11412272 MTR_1g087030 -42.24 LOC11406674 chlorophyll a-b binding protein CP29.3, chloroplastic 11406674 MTR_3g070340 -42.13 LOC11420076 ribulose bisphosphate carboxylase small chain, chloroplastic 11420076 MTR_6g018300 -41.22 LOC25498076 transcription factor UNE10 25498076 MTR_7g039110 -41.01 LOC25487038 glutathione S-transferase 3 25487038 MTR_2g070060 -40.91 LOC11422812 disease resistance-like protein CSA1 11422812 MTR_6g075870 -40.34 LOC11409580 uncharacterized LOC11409580 11409580 MTR_5g073620 -39.54 LOC25498664 fructose-1,6-bisphosphatase, chloroplastic 25498664 MTR_7g066120 -38.34 LOC25492873 cytochrome P450 81Q32 25492873 MTR_4g077210 -38.10 LOC25497235 uncharacterized LOC25497235 25497235 MTR_6g465290 -38.10 LOC11428767 uncharacterized LOC11428767 11428767 MTR_1g015290 -37.97 LOC11436776 phosphoglycerate mutase-like protein AT74H 11436776 MTR_5g010090 -37.90 LOC25497425 ribulose bisphosphate carboxylase small chain 3A, chloroplastic 25497425 MTR_7g007230 -37.72 LOC25500523 uncharacterized LOC25500523 25500523 MTR_8g019450 -37.60 LOC25485387 cytochrome P450 93B16 25485387 MTR_1g107295 -37.56 LOC25485056 short-chain dehydrogenase TIC 32, chloroplastic 25485056 MTR_1g100305 -37.16 LOC11426247 cytochrome P450 83B1 11426247 MTR_5g023680 -37.05 LOC11429412 BTB/POZ domain-containing protein SR1IP1 11429412 MTR_5g016060 -36.97 LOC11437530 glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic 11437530 MTR_7g084800 -36.93 LOC25492554 copper transporter 6 25492554 MTR_4g064963 -36.90 LOC11430405 G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 11430405 MTR_8g011430 -36.78 LOC25496772 protein PLASTID MOVEMENT IMPAIRED 1 25496772 MTR_6g080430 -36.70 LOC25489510 CBBY-like protein 25489510 MTR_3g075230 -36.56 LOC11421544 NAD(P)H-quinone oxidoreductase subunit U, chloroplastic 11421544 MTR_3g104980 -35.78 LOC25489329 ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic 25489329 MTR_3g068030 -35.78 LOC11412610 ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic 11412610 MTR_4g021210 -35.70 LOC25479446 peroxisomal membrane protein 11B 25479446 MTR_0004s0440 -35.63 LOC11442149 ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic 11442149 MTR_5g080450 -35.46 LOC11440755 probable plastid-lipid-associated protein 12, chloroplastic 11440755 MTR_1g116320 -35.38 LOC25484736 cytochrome P450 709B2 25484736 MTR_1g085680 -35.29 LOC25498919 cytochrome c-2 25498919 MTR_7g080793 -34.96 LOC11440680 photosystem I chlorophyll a/b-binding protein 6, chloroplastic 11440680 MTR_2g042720 -34.89 LOC25487060 peroxisomal (S)-2-hydroxy-acid oxidase 25487060 MTR_2g070420 -34.87 LOC11427672 chlorophyll a-b binding protein of LHCII type 1 11427672 MTR_6g012110 -34.85 LOC25491077 non-specific lipid-transfer protein 1 25491077 MTR_3g467100 -34.81 LOC25496881 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic 25496881 MTR_6g085050 -34.45 LOC11426628 short-chain dehydrogenase reductase 3b 11426628 MTR_7g110130 -34.41 LOC11426999 beta-carotene isomerase D27, chloroplastic-like 11426999 MTR_3g080840 -34.39 LOC25500762 uncharacterized LOC25500762 25500762 MTR_8g028100 -34.21 LOC11425146 cytochrome P450 89A2 11425146 MTR_2g010250 -34.19 LOC11419130 photosystem II 22 kDa protein, chloroplastic 11419130 MTR_3g088040 -34.18 LOC11442672 photosynthetic NDH subunit of subcomplex B 2, chloroplastic 11442672 MTR_7g085490 -34.17 LOC25491277 zeatin O-glucosyltransferase 25491277 MTR_4g008630 -33.84 LOC11440200 fructose-bisphosphate aldolase 1, chloroplastic 11440200 MTR_4g071880 -33.80 LOC11423698 fatty acid desaturase 4, chloroplastic 11423698 MTR_3g051220 -33.75 LOC25500270 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic 25500270 MTR_8g012565 -33.73 LOC11414909 chlorophyll a-b binding protein of LHCII type 1 11414909 MTR_6g012080 -33.71 LOC11445395 fructose-bisphosphate aldolase 1, chloroplastic 11445395 MTR_4g071860 -33.63 rps14 ribosomal protein S14 5333199 MetrCp064 -33.54 LOC25495306 chlorophyll a-b binding protein of LHCII type 1 25495306 MTR_6g011890 -33.45 LOC25500581 chlorophyll a-b binding protein 7, chloroplastic 25500581 MTR_8g023790 -33.44 LOC11406827 magnesium-dependent phosphatase 1 11406827 MTR_4g093560 -33.36 LOC25482249 photosystem I reaction center subunit psaK, chloroplastic 25482249 MTR_1g026820 -33.34 LOC25488145 uncharacterized LOC25488145 25488145 MTR_2g436960 -33.32 LOC11445197 NAD(P)H-quinone oxidoreductase subunit S, chloroplastic 11445197 MTR_8g032260 -33.21 LOC11434471 protein PROTON GRADIENT REGULATION 5, chloroplastic 11434471 MTR_1g045140 -33.01 LOC11416903 probable zinc metalloprotease EGY2, chloroplastic 11416903 MTR_5g082260 -33.01 LOC11413262 photosynthetic NDH subunit of lumenal location 2, chloroplastic 11413262 MTR_5g041910 -32.99 psbA photosystem II protein D1 5333175 MetrCp076 -32.89 LOC25485090 3-hexulose-6-phosphate isomerase 25485090 MTR_1g100753 -32.78 LOC112422570 uncharacterized LOC112422570 112422570 -32.78 LOC25484504 pheophytinase, chloroplastic 25484504 MTR_1g076920 -32.77 LOC25492390 fructose-bisphosphate aldolase 1, chloroplastic 25492390 MTR_4g057670 -32.76 LOC11411228 NAD(P)H-quinone oxidoreductase subunit N, chloroplastic 11411228 MTR_3g062890 -32.75 LOC25500207 cis-3-alkyl-4-alkyloxetan-2-one decarboxylase 25500207 MTR_8g010120 -32.74 LOC11436721 phosphoglycolate phosphatase 1A, chloroplastic 11436721 MTR_7g080530 -32.66 LOC11431351 protein NRT1/ PTR FAMILY 6.4 11431351 MTR_5g085850 -32.58 LOC11417391 uncharacterized LOC11417391 11417391 MTR_5g043580 -32.46 LOC11445773 uncharacterized LOC11445773 11445773 MTR_3g026020 -32.44 LOC120577608 uncharacterized LOC120577608 120577608 -32.42 LOC120577103 photosystem II protein D1-like 120577103 -32.41 LOC25495305 chlorophyll a-b binding protein of LHCII type 1 25495305 MTR_6g011880 -32.40 LOC11428156 glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic 11428156 MTR_3g115920 -32.34 LOC25482895 MDIS1-interacting receptor like kinase 2 25482895 MTR_1g040545 -32.30 LOC25484496 uncharacterized LOC25484496 25484496 MTR_1g076840 -32.21 LOC11422409 photosystem I reaction center subunit V, chloroplastic 11422409 MTR_3g010000 -32.20 LOC25495910 chlorophyll a-b binding protein 6, chloroplastic 25495910 MTR_6g033320 -32.18 LOC120580075 photosystem II protein D1 120580075 -32.15 LOC120580115 uncharacterized LOC120580115 120580115 -32.10 LOC11442814 rust resistance kinase Lr10 11442814 MTR_4g073230 -32.07 LOC25493402 uncharacterized protein ycf23 25493402 MTR_4g094625 -32.07 LOC11420725 NAD(P)H-quinone oxidoreductase subunit O, chloroplastic 11420725 MTR_3g096290 -32.02 LOC11409298 RNA polymerase sigma factor sigD, chloroplastic 11409298 MTR_3g033420 -32.00 LOC25482675 uncharacterized LOC25482675 25482675 MTR_1g034260 -31.99 LOC25484170 protein LOW PSII ACCUMULATION 1, chloroplastic 25484170 MTR_1g069240 -31.97 LOC25479489 disease resistance protein RPV1 25479489 MTR_0007s0060 -31.96 LOC11423081 uncharacterized protein At4g14100 11423081 MTR_3g098500 -31.85 LOC25490400 photosynthetic NDH subunit of subcomplex B 4, chloroplastic 25490400 MTR_3g435320 -31.80 LOC25491354 root phototropism protein 3 25491354 MTR_4g011530 -31.75	Lower 100 Genes Symbol Function* Entrez Gene ID* Other ID PC LOC11411833 embryonic abundant protein VF30.1 11411833 MTR_8g045890 -64.60 LOC25484218 cellulose synthase A catalytic subunit 4 [UDP-forming] 25484218 MTR_1g069605 -50.05 LOC25500851 ferric reduction oxidase 2 25500851 MTR_8g028780 -49.11 LOC11422023 uncharacterized LOC11422023 11422023 MTR_2g030460 -48.50 LOC25501502 proline-rich extensin-like protein EPR1 25501502 MTR_8g069925 -47.96 LOC25489717 stilbene synthase 4 25489717 MTR_3g088675 -47.56 LOC25488436 COBRA-like protein 4 25488436 MTR_2g462000 -47.19 LOC11446331 cytochrome P450 704C1 11446331 MTR_8g035810 -46.53 LOC25482259 rust resistance kinase Lr10 25482259 MTR_1g026940 -45.70 LOC25492744 BURP domain-containing protein 9 25492744 MTR_4g069550 -45.43 LOC112422543 uncharacterized LOC112422543 112422543 -44.05 LOC11406450 fasciclin-like arabinogalactan protein 12 11406450 MTR_4g059790 -42.83 LOC25502830 uncharacterized LOC25502830 25502830 -42.61 LOC25491980 receptor-like protein EIX1 25491980 MTR_4g040420 -42.06 LOC25493448 isoflavone 3'-hydroxylase-like 25493448 MTR_4g094772 -41.93 LOC25491077 non-specific lipid-transfer protein 1 25491077 MTR_3g467100 -41.91 LOC11405526 uncharacterized LOC11405526 11405526 MTR_2g081770 -41.89 LOC25489292 receptor-like cytoplasmic kinase 176 25489292 MTR_3g067770 -41.86 LOC11413997 fasciclin-like arabinogalactan protein 12 11413997 MTR_2g093970 -41.47 LOC11408979 disease resistance protein RUN1 11408979 MTR_6g074470 -41.13 LOC25487204 geraniol 8-hydroxylase 25487204 MTR_2g073420 -40.97 LOC11414505 WAT1-related protein At1g43650 11414505 MTR_6g036450 -40.80 LOC25480055 codeine O-demethylase 25480055 MTR_0056s0160 -40.57 LOC11408730 fasciclin-like arabinogalactan protein 11 11408730 MTR_4g059780 -40.41 LOC11405460 rhamnogalacturonate lyase B 11405460 MTR_5g031170 -40.02 LOC11420316 probable glucan 1,3-beta-glucosidase A 11420316 MTR_3g009010 -39.95 LOC11414856 putative disease resistance RPP13-like protein 1 11414856 MTR_3g015260 -39.54 LOC11421083 probable terpene synthase 2 11421083 MTR_6g008560 -39.47 LOC25482703 peptidyl-prolyl cis-trans isomerase CYP21-4 25482703 MTR_1g035360 -39.29 LOC11410708 cellulose synthase A catalytic subunit 7 [UDP-forming] 11410708 MTR_8g063270 -39.17 LOC11438309 fasciclin-like arabinogalactan protein 12 11438309 MTR_2g017960 -39.00 LOC25495466 receptor-like protein EIX2 25495466 MTR_6g016195 -38.86 LOC112421340 isoflavone 2'-hydroxylase 112421340 -38.65 LOC25483852 GDSL esterase/lipase At5g03610 25483852 MTR_1g060500 -38.50 LOC11425316 germin-like protein subfamily 1 member 11 11425316 MTR_6g005340 -38.19 LOC11433879 rust resistance kinase Lr10 11433879 MTR_1g031320 -38.10 LOC11409580 uncharacterized LOC11409580 11409580 MTR_5g073620 -37.83 LOC11410640 uncharacterized LOC11410640 11410640 MTR_7g067950 -37.46 LOC11413938 phenylcoumaran benzylic ether reductase POP1 11413938 MTR_4g070370 -37.35 LOC11407455 protein ROOT INITIATION DEFECTIVE 3 11407455 MTR_4g103760 -37.19 LOC25502171 uncharacterized LOC25502171 25502171 MTR_8g099365 -37.15 LOC11422753 probable sugar phosphate/phosphate translocator At3g11320 11422753 MTR_4g018760 -37.07 LOC112421765 uncharacterized LOC112421765 112421765 -36.86 LOC25498524 protein SRG1 25498524 MTR_7g062580 -36.83 LOC11407088 uncharacterized LOC11407088 11407088 MTR_7g067940 -36.77 LOC25502860 receptor kinase-like protein Xa21 25502860 MTR_8g470370 -36.62 LOC25501131 probable pectinesterase/pectinesterase inhibitor 47 25501131 MTR_8g042910 -36.61 LOC25494640 ribonuclease 3 25494640 MTR_5g041095 -36.61 LOC25495314 uncharacterized LOC25495314 25495314 MTR_6g013135 -36.60 LOC11442310 putative receptor-like protein kinase At4g00960 11442310 MTR_5g065130 -36.25 LOC11445733 fasciclin-like arabinogalactan protein 11 11445733 MTR_4g053380 -36.23 LOC25484764 nuclear transcription factor Y subunit B-4 25484764 MTR_1g088860 -36.13 LOC11416281 G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 11416281 MTR_3g007510 -36.04 LOC25486016 receptor-like protein EIX2 25486016 MTR_2g017785 -36.03 LOC25499441 uncharacterized LOC25499441 25499441 -36.00 LOC25487046 probable glutathione S-transferase 25487046 MTR_2g070180 -35.88 LOC11411133 metalloendoproteinase 1 11411133 MTR_5g036360 -35.84 LOC11416570 UPF0481 protein At3g47200 11416570 MTR_7g067970 -35.81 LOC11436186 peroxisomal and mitochondrial division factor 2 11436186 MTR_5g008430 -35.78 LOC11409492 disease resistance protein RPV1 11409492 MTR_2g083520 -35.65 LOC112420419 uncharacterized LOC112420419 112420419 -35.64 LOC11440278 cysteine-rich receptor-like protein kinase 25 11440278 MTR_6g057770 -35.31 LOC11411140 soyasapogenol B glucuronide galactosyltransferase 11411140 MTR_7g070940 -35.27 LOC11442920 fasciclin-like arabinogalactan protein 11 11442920 MTR_2g017950 -35.17 LOC11419903 disease resistance protein RUN1-like 11419903 -35.16 LOC25492796 putative disease resistance RPP13-like protein 3 25492796 MTR_4g073840 -35.13 LOC25492025 uncharacterized LOC25492025 25492025 -35.08 LOC112420426 uncharacterized LOC112420426 112420426 -35.04 LOC11414724 TMV resistance protein N 11414724 MTR_5g038180 -34.92 LOC11446639 G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 11446639 MTR_4g114270 -34.87 LOC25487144 probable LRR receptor-like serine/threonine-protein kinase At3g47570 25487144 MTR_2g072610 -34.75 LOC11407754 uncharacterized LOC11407754 11407754 -34.73 LOC112417559 uncharacterized LOC112417559 112417559 -34.73 LOC25499496 syntaxin-121 25499496 MTR_7g106420 -34.68 LOC25498392 albumin-1 D 25498392 MTR_7g056817 -34.63 LOC11419309 disease resistance protein RPV1 11419309 MTR_6g072460 -34.50 LOC25481036 type-1 glutamine synthetase 1 25481036 MTR_0417s0020 -34.45 LOC25497545 uncharacterized LOC25497545 25497545 MTR_7g015060 -34.39 LOC11414612 rust resistance kinase Lr10 11414612 MTR_1g031200 -34.37 LOC25485488 zinc finger protein JAGGED 25485488 MTR_1g110710 -34.33 LOC25487263 protein IQ-DOMAIN 1 25487263 MTR_2g078210 -34.26 LOC25488576 disease resistance protein RPM1 25488576 MTR_3g012060 -34.21 LOC11417857 uncharacterized LOC11417857 11417857 -34.14 LOC112417068 uncharacterized LOC112417068 112417068 -34.13 LOC25487145 probable LRR receptor-like serine/threonine-protein kinase At3g47570 25487145 MTR_2g072640 -34.09 LOC25491672 uncharacterized LOC25491672 25491672 MTR_4g027155 -33.92 LOC11419886 uncharacterized LOC11419886 11419886 MTR_8g011870 -33.87 LOC25482276 rust resistance kinase Lr10 25482276 MTR_1g027200 -33.79 LOC11415872 fasciclin-like arabinogalactan protein 11 11415872 MTR_8g087460 -33.68 LOC25480554 putative FBD-associated F-box protein At5g22720 25480554 MTR_0176s0050 -33.66 LOC11441930 uncharacterized LOC11441930 11441930 -33.63 LOC11446449 tryptophan synthase beta chain 1 11446449 MTR_5g005670 -33.57 LOC11415996 proteasome subunit alpha type-5 11415996 MTR_6g013300 -33.56 LOC120580570 uncharacterized LOC120580570 120580570 -33.56 LOC11419525 putative lipid-transfer protein DIR1 11419525 MTR_3g055250 -33.52 LOC25491368 probable 2-oxoglutarate-dependent dioxygenase AOP1 25491368 MTR_4g011720 -33.43 LOC11435545 AP2-like ethylene-responsive transcription factor BBM1 11435545 MTR_7g080460 -33.38 LOC25492138 probable terpene synthase 2 25492138 MTR_4g048460 -33.25 LOC25482765 isoliquiritigenin 2'-O-methyltransferase 25482765 MTR_1g036460 -33.17 LOC25484152 polyadenylate-binding protein 2 25484152 MTR_1g069140 -33.17	Lower 100 Genes Symbol Function* Entrez Gene ID* Other ID PC LOC11419081 uncharacterized GPI-anchored protein At4g28100 11419081 MTR_2g089530 -34.51 LOC11438445 EPIDERMAL PATTERNING FACTOR-like protein 9 11438445 MTR_7g052120 -34.19 LOC11422708 gibberellin-regulated protein 13 11422708 MTR_7g090590 -32.81 LOC11431334 GDSL esterase/lipase At5g33370 11431334 MTR_7g116520 -31.63 LOC11445564 flavonoid 3-O-glucosyltransferase 11445564 MTR_4g128690 -31.24 LOC11414816 very-long-chain aldehyde decarbonylase CER1 11414816 MTR_7g090100 -31.24 LOC25501074 repetitive proline-rich cell wall protein 1-like 25501074 MTR_8g037933 -30.84 LOC25488834 gibberellin-regulated protein 6 25488834 MTR_3g037750 -30.33 LOC25500069 patatin-like protein 4 25500069 MTR_8g007065 -29.54 LOC11438187 protein CHLORORESPIRATORY REDUCTION 6, chloroplastic 11438187 MTR_4g116350 -29.33 LOC25484868 nodule lectin 25484868 MTR_1g090937 -28.18 LOC25491058 expansin-A8 25491058 MTR_3g466790 -27.73 LOC25499695 GRF1-interacting factor 1 25499695 MTR_7g115410 -27.47 LOC11434820 protein PELPK1 11434820 MTR_2g009480 -27.41 LOC25496371 BAHD acyltransferase DCR 25496371 MTR_6g045553 -27.21 LOC25493429 polygalacturonase At1g48100 25493429 MTR_4g094715 -27.14 LOC112419456 uncharacterized LOC112419456 112419456 -27.02 LOC11408308 uncharacterized LOC11408308 11408308 MTR_8g085150 -26.62 LOC11421235 GDSL esterase/lipase APG 11421235 MTR_8g014910 -26.37 LOC11413674 senescence associated gene 20 11413674 MTR_7g071760 -26.19 LOC11410053 formin-like protein 11 11410053 MTR_1g083260 -26.14 LOC120575835 chitinase 2-like 120575835 -25.87 LOC25486501 auxin-binding protein ABP19a 25486501 MTR_2g041550 -25.79 LOC11426262 probable mannitol dehydrogenase 11426262 MTR_5g031300 -25.54 LOC25490580 phytoene synthase 2, chloroplastic 25490580 MTR_3g450510 -25.39 LOC25481081 chitinase 2 25481081 MTR_0443s0040 -25.14 LOC11440673 36.4 kDa proline-rich protein 11440673 MTR_4g115360 -25.05 LOC11421208 acid phosphatase 1 11421208 MTR_1g045120 -24.98 LOC11439909 GDSL esterase/lipase EXL3 11439909 MTR_3g114090 -24.93 LOC11411527 albumin-1 B 11411527 MTR_6g036620 -24.81 LOC11431692 putative lipid-transfer protein DIR1 11431692 MTR_7g052640 -24.75 LOC11446660 uncharacterized LOC11446660 11446660 MTR_4g077160 -24.70 LOC25499610 pectinesterase 25499610 MTR_7g108900 -24.68 LOC11433975 glycine cleavage system H protein, mitochondrial 11433975 MTR_5g014260 -24.68 LOC11410191 polygalacturonase At1g48100 11410191 MTR_2g032710 -24.63 LOC25480624 60S ribosomal protein L37a 25480624 MTR_0199s0040 -24.53 LOC11428434 GDSL esterase/lipase At3g27950 11428434 MTR_6g007090 -24.50 LOC11414040 very-long-chain aldehyde decarbonylase CER1 11414040 MTR_7g090140 -24.46 LOC11434399 probable serine/threonine-protein kinase kinX 11434399 MTR_5g098020 -24.30 LOC11412981 uncharacterized LOC11412981 11412981 MTR_4g070570 -24.28 LOC25481245 caffeic acid 3-O-methyltransferase 25481245 MTR_0591s0010 -24.12 LOC25500607 transcription factor bHLH67 25500607 MTR_8g024210 -24.08 LOC112417092 zinc finger BED domain-containing protein RICESLEEPER 2-like 112417092 -24.03 LOC11440200 fructose-bisphosphate aldolase 1, chloroplastic 11440200 MTR_4g071880 -24.01 LOC11440049 chalcone synthase 11440049 MTR_7g084300 -23.98 LOC11434231 aspartyl protease AED3 11434231 MTR_3g100500 -23.92 LOC25483033 probable DNA double-strand break repair Rad50 ATPase 25483033 MTR_1g046070 -23.84 LOC11408847 co-chaperone protein p23-1 11408847 MTR_6g034550 -23.83 LOC11434084 uncharacterized LOC11434084 11434084 MTR_5g083810 -23.67 LOC120580559 uncharacterized LOC120580559 120580559 -23.41 LOC25480955 uncharacterized LOC25480955 25480955 MTR_0365s0010 -23.39 LOC25481012 uncharacterized LOC25481012 25481012 MTR_0400s0020 -23.39 LOC11428090 gibberellin-regulated protein 1 11428090 MTR_1g025250 -23.36 LOC25485363 peamaclein 25485363 MTR_1g106915 -23.34 LOC25495639 uncharacterized LOC25495639 25495639 MTR_6g018770 -23.33 LOC11406100 expansin-A13 11406100 MTR_3g064510 -23.30 LOC11430578 probable aldo-keto reductase 1 11430578 MTR_7g114990 -23.27 LOC11414072 albumin-2 11414072 MTR_6g073540 -23.22 LOC11436613 probable sucrose-phosphate synthase 2 11436613 MTR_5g091340 -23.10 LOC11414304 protein ENHANCED PSEUDOMONAS SUSCEPTIBILITY 1 11414304 MTR_4g022290 -22.99 LOC112417120 transcription factor PRE6-like 112417120 -22.99 LOC11422912 basic leucine zipper 34 11422912 MTR_4g079500 -22.96 LOC25501137 probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 25501137 MTR_8g044230 -22.92 LOC120577706 9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic-like 120577706 -22.90 LOC11425658 histone-lysine N-methyltransferase ATXR6 11425658 MTR_1g007670 -22.89 LOC11438939 endoglucanase 1 11438939 MTR_3g080810 -22.64 LOC25496220 uncharacterized oxidoreductase At4g09670 25496220 MTR_6g038640 -22.62 LOC11418216 psbP domain-containing protein 3, chloroplastic 11418216 MTR_3g116110 -22.62 LOC25495305 chlorophyll a-b binding protein of LHCII type 1 25495305 MTR_6g011880 -22.59 LOC11411145 senescence associated gene 20 11411145 MTR_7g071790 -22.53 LOC11410091 soyasapogenol B glucuronide galactosyltransferase 11410091 MTR_7g070740 -22.49 LOC25492963 transcription factor MYB106 25492963 MTR_4g082290 -22.46 LOC25501370 polygalacturonase At1g48100 25501370 MTR_8g065010 -22.42 LOC11427529 beta-glucosidase 12 11427529 MTR_7g051610 -22.36 LOC11414628 glutelin type-A 3 11414628 MTR_8g088880 -22.34 LOC25485386 gallate 1-beta-glucosyltransferase 25485386 MTR_1g107285 -22.33 LOC11433487 hydroquinone glucosyltransferase 11433487 MTR_8g006270 -22.32 LOC11430704 transcription factor bHLH18 11430704 MTR_2g104550 -22.31 LOC11419643 glucan endo-1,3-beta-glucosidase 4 11419643 MTR_5g097420 -22.27 LOC11432941 protein HOTHEAD 11432941 MTR_2g100070 -22.21 LOC11416346 delta(8)-fatty-acid desaturase 1 11416346 MTR_1g016070 -22.14 LOC11420725 NAD(P)H-quinone oxidoreductase subunit O, chloroplastic 11420725 MTR_3g096290 -22.08 LOC11429223 probable plastid-lipid-associated protein 4, chloroplastic 11429223 MTR_2g007300 -22.05 LOC11431390 photosystem I chlorophyll a/b-binding protein 5, chloroplastic 11431390 MTR_3g101670 -22.01 LOC11407103 polygalacturonase At1g48100 11407103 MTR_5g034090 -21.94 LOC11439098 probable membrane-associated kinase regulator 1 11439098 MTR_5g005960 -21.93 LOC11407920 14 kDa proline-rich protein DC2.15 11407920 MTR_4g101330 -21.93 LOC11434757 inactive protein kinase SELMODRAFT_444075 11434757 MTR_2g100290 -21.87 LOC11432140 GDSL esterase/lipase EXL3 11432140 MTR_3g114120 -21.87 LOC11420861 GDSL esterase/lipase At5g33370 11420861 MTR_7g116510 -21.84 LOC11432211 phosphatidylinositol 4-kinase gamma 2 11432211 MTR_5g009120 -21.82 LOC25496665 zinc-finger homeodomain protein 5 25496665 MTR_6g073013 -21.80 LOC11430239 RNA-binding protein 38 11430239 MTR_5g064120 -21.80 LOC11408737 ferredoxin, leaf L-A 11408737 MTR_8g088720 -21.72 LOC11406760 non-specific lipid transfer protein GPI-anchored 6 11406760 MTR_8g085560 -21.72 LOC25499785 bidirectional sugar transporter N3-like 25499785 MTR_7g405730 -21.71 LOC11437099 putative protease Do-like 14 11437099 MTR_5g064160 -21.63 LOC11426763 pEARLI1-like lipid transfer protein 1 11426763 MTR_3g106750 -21.56 LOC11433472 protein CURVATURE THYLAKOID 1B, chloroplastic 11433472 MTR_7g118290 -21.45 LOC25497885 uncharacterized LOC25497885 25497885 -21.45	Lower 100 Genes Symbol Function* Entrez Gene ID* Other ID PC LOC25481012 uncharacterized LOC25481012 25481012 MTR_0400s0020 -38.44 LOC120580559 uncharacterized LOC120580559 120580559 -37.62 LOC25480955 uncharacterized LOC25480955 25480955 MTR_0365s0010 -35.95 LOC11405889 probable sucrose-phosphate synthase 2 11405889 MTR_3g047380 -35.74 LOC11408453 guanosine deaminase 11408453 MTR_2g045280 -34.22 LOC11436220 probable protein phosphatase 2C 8 11436220 MTR_5g009370 -31.51 LOC11428788 uncharacterized LOC11428788 11428788 MTR_3g105210 -29.49 LOC112422694 uncharacterized LOC112422694 112422694 -28.83 LOC25500370 basic leucine zipper 43 25500370 MTR_8g015250 -28.67 LOC25496855 dehydrin DHN1 25496855 MTR_6g084640 -28.18 LOC120575943 probable terpene synthase 2 120575943 -27.89 LOC11433452 aquaporin TIP2-1 11433452 MTR_2g101370 -27.66 LOC25494524 uncharacterized LOC25494524 25494524 -27.55 LOC120575944 probable terpene synthase 2 120575944 -27.39 LOC120575865 probable terpene synthase 2 120575865 -27.33 LOC120580864 probable terpene synthase 2 120580864 -27.32 LOC120575864 probable terpene synthase 2 120575864 -27.08 LOC11408630 cysteine-rich receptor-like protein kinase 2 11408630 -27.07 LOC11425580 abscisic acid and environmental stress-inducible protein 11425580 MTR_5g084570 -26.64 LOC11426938 formyltetrahydrofolate deformylase 1, mitochondrial 11426938 MTR_5g012850 -26.57 LOC11410963 uncharacterized LOC11410963 11410963 MTR_5g025800 -26.31 LOC11445037 senescence-specific cysteine protease SAG39 11445037 MTR_4g080700 -26.27 LOC25491337 late embryogenesis abundant protein 2 25491337 MTR_4g011270 -26.26 LOC120578198 very-long-chain aldehyde decarbonylase CER3-like 120578198 -25.88 LOC11431109 1-aminocyclopropane-1-carboxylate oxidase homolog 3 11431109 MTR_8g009160 -25.83 LOC11423944 uncharacterized LOC11423944 11423944 MTR_2g013780 -25.67 LOC25490994 alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial 25490994 MTR_3g465800 -25.42 LOC25500973 scopoletin glucosyltransferase 25500973 MTR_8g032950 -25.35 LOC112421253 uncharacterized LOC112421253 112421253 -25.31 LOC25479709 cytochrome P450 736A117 25479709 MTR_0022s0290 -25.28 LOC11418767 thiosulfate sulfurtransferase 16, chloroplastic 11418767 MTR_5g023170 -25.00 LOC25489740 2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial 25489740 MTR_3g088845 -24.91 LOC11417770 pyruvate, phosphate dikinase, chloroplastic 11417770 MTR_4g118350 -24.89 LOC11433847 chloride channel protein CLC-c 11433847 MTR_2g005410 -24.79 LOC11422042 caffeoylshikimate esterase 11422042 MTR_1g088470 -24.75 LOC25491334 late embryogenesis abundant protein 2 25491334 MTR_4g011230 -24.68 LOC11405562 uncharacterized LOC11405562 11405562 MTR_3g046650 -24.67 LOC11431169 cold and drought-regulated protein CORA 11431169 MTR_5g084530 -24.55 LOC25487982 ACT domain-containing protein ACR11 25487982 MTR_2g105090 -24.49 LOC11431897 NAC transcription factor 47 11431897 MTR_7g085220 -24.35 LOC25492523 probable serine/threonine-protein kinase PBL10 25492523 MTR_4g063935 -24.33 LOC25490198 uncharacterized LOC25490198 25490198 MTR_3g111970 -23.90 LOC112421963 uncharacterized LOC112421963 112421963 -23.78 LOC25488057 probable protein phosphatase 2C 34 25488057 MTR_2g435550 -23.68 LOC120577744 probable inositol transporter 2 120577744 -23.62 LOC11408186 albumin-1 11408186 MTR_3g067430 -23.62 LOC11446507 uncharacterized LOC11446507 11446507 MTR_8g069350 -23.53 LOC25500072 patatin-like protein 2 25500072 MTR_8g007095 -23.43 LOC11443285 kunitz-type trypsin inhibitor-like 2 protein 11443285 MTR_6g059530 -23.32 LOC25502043 protein LURP-one-related 4 25502043 MTR_8g097380 -23.31 LOC112416405 uncharacterized LOC112416405 112416405 -23.29 LOC11442485 uncharacterized LOC11442485 11442485 MTR_3g085020 -23.26 LOC25484152 polyadenylate-binding protein 2 25484152 MTR_1g069140 -23.24 LOC25495607 kunitz-type trypsin inhibitor-like 2 protein 25495607 MTR_6g017225 -23.19 LOC112419955 uncharacterized LOC112419955 112419955 -23.14 LOC120580313 uncharacterized LOC120580313 120580313 -23.08 LOC112419918 uncharacterized LOC112419918 112419918 -23.06 LOC112419789 uncharacterized LOC112419789 112419789 -23.00 LOC11443236 protein MANNAN SYNTHESIS-RELATED 11443236 MTR_2g038320 -22.90 LOC25490897 probable terpene synthase 2 25490897 MTR_3g464190 -22.77 LOC11433261 cytochrome P450 71D11 11433261 MTR_5g095290 -22.69 LOC11432360 EPIDERMAL PATTERNING FACTOR-like protein 3 11432360 MTR_2g099810 -22.66 LOC11406369 probable aminotransferase TAT2 11406369 MTR_8g061360 -22.64 LOC11424005 gibberellin 20 oxidase 2 11424005 MTR_3g096500 -22.59 LOC112419210 uncharacterized LOC112419210 112419210 -22.54 LOC11438046 chaperone protein dnaJ 11, chloroplastic 11438046 MTR_8g075780 -22.49 LOC11411742 monothiol glutaredoxin-S2 11411742 MTR_4g119040 -22.47 LOC25489543 aldehyde dehydrogenase family 2 member B4, mitochondrial 25489543 MTR_3g078170 -22.44 LOC11417240 uncharacterized LOC11417240 11417240 MTR_3g116320 -22.43 LOC11415168 monothiol glutaredoxin-S2 11415168 MTR_4g119030 -22.34 LOC11415570 uncharacterized LOC11415570 11415570 MTR_5g032960 -22.20 LOC25494027 F-box/kelch-repeat protein At3g06240 25494027 MTR_4g117550 -22.17 LOC11435223 uncharacterized LOC11435223 11435223 MTR_3g104630 -22.15 LOC25490006 branched-chain-amino-acid aminotransferase 2, chloroplastic 25490006 MTR_3g103580 -22.12 LOC112422646 protein FAR-RED IMPAIRED RESPONSE 1-like 112422646 -22.10 LOC11435937 eukaryotic translation initiation factor 3 subunit A 11435937 MTR_7g053110 -22.09 LOC112416509 uncharacterized LOC112416509 112416509 -22.00 LOC25502046 protein LURP-one-related 4 25502046 MTR_8g097410 -21.94 LOC11432556 PH, RCC1 and FYVE domains-containing protein 1 11432556 MTR_7g072410 -21.74 LOC11432445 kunitz-type elastase inhibitor BrEI 11432445 MTR_3g106620 -21.63 LOC11425016 cold and drought-regulated protein CORA 11425016 MTR_5g084460 -21.62 LOC11406148 uncharacterized LOC11406148 11406148 MTR_8g086080 -21.53 LOC11419069 uncharacterized LOC11419069 11419069 MTR_5g038460 -21.51 LOC11405599 uncharacterized LOC11405599 11405599 -21.45 LOC120579379 uncharacterized LOC120579379 120579379 -21.44 LOC11410136 uncharacterized LOC11410136 11410136 -21.43 LOC25495270 7-deoxyloganetin glucosyltransferase 25495270 MTR_6g011340 -21.42 LOC25498173 serine/threonine-protein kinase OXI1 25498173 MTR_7g053200 -21.37 LOC11435508 beta carbonic anhydrase 5, chloroplastic 11435508 MTR_5g066060 -21.33 LOC11440397 U-box domain-containing protein 33 11440397 MTR_8g030690 -21.28 LOC120580885 uncharacterized LOC120580885 120580885 -21.18 LOC112422320 U2 spliceosomal RNA 112422320 -21.17 LOC25484285 hyoscyamine 6-dioxygenase 25484285 MTR_1g070085 -21.13 LOC112419517 uncharacterized LOC112419517 112419517 -21.13 LOC112422553 uncharacterized LOC112422553 112422553 -21.12 LOC11438245 inositol transporter 1 11438245 MTR_1g116660 -21.10 LOC25491105 peroxidase P7 25491105 MTR_3g467600 -21.10 LOC11407838 ABC transporter G family member STR2-like 11407838 MTR_5g030910 -21.06 LOC25486331 amino acid permease 8 25486331 MTR_2g031750 -21.04 LOC25491320 metallothiol transferase FosB 25491320 MTR_4g011020 -21.02	Lower 100 Genes Symbol Function* Entrez Gene ID* Other ID PC LOC11427657 copper transporter 6 11427657 MTR_4g065660 -34.82 LOC11439629 chitinase 2 11439629 MTR_0062s0110 -33.91 LOC11440564 chitinase 2 11440564 MTR_0062s0170 -33.70 LOC11444624 cytosolic sulfotransferase 15-like 11444624 -32.93 LOC11437642 chitinase 2 11437642 MTR_0062s0130 -32.90 LOC11419739 ferric reduction oxidase 4 11419739 MTR_1g100150 -31.41 LOC25501073 UPF0481 protein At3g47200 25501073 MTR_8g037923 -29.98 LOC11427590 albumin-1 11427590 MTR_7g044920 -29.06 LOC11411833 embryonic abundant protein VF30.1 11411833 MTR_8g045890 -29.01 LOC11421083 probable terpene synthase 2 11421083 MTR_6g008560 -28.08 LOC11422205 probable 2-oxoglutarate-dependent dioxygenase AOP1 11422205 MTR_7g090520 -27.89 LOC11428158 BURP domain-containing protein 9 11428158 MTR_3g116270 -27.84 LOC120577306 cytochrome P450 71D11-like 120577306 -27.82 LOC25484552 aluminum-activated malate transporter 10 25484552 MTR_1g077660 -27.81 LOC25500364 probable LRR receptor-like serine/threonine-protein kinase At1g05700 25500364 MTR_8g015150 -27.49 LOC25488616 cytochrome P450 82A4 25488616 MTR_3g014880 -27.22 LOC11438168 kunitz-type trypsin inhibitor-like 1 protein 11438168 MTR_6g059650 -27.09 LOC25499720 L-type lectin-domain containing receptor kinase IX.1 25499720 MTR_7g115740 -26.21 LOC11405486 peroxidase 10 11405486 MTR_5g017860 -25.89 LOC11434140 albumin-2 11434140 MTR_1g066530 -24.99 LOC25480086 chitinase 2 25480086 MTR_0062s0020 -24.84 LOC11427123 S-type anion channel SLAH1 11427123 MTR_4g132400 -24.78 LOC120579759 (-)-germacrene D synthase-like 120579759 -24.65 LOC11416968 S-adenosyl-L-methionine:benzoic acid/salicylic acid carboxyl methyltransferase 3 11416968 MTR_5g020940 -24.52 LOC25498524 protein SRG1 25498524 MTR_7g062580 -24.26 LOC11405947 nicotianamine synthase 11405947 MTR_1g084050 -23.92 LOC25498102 soyasapogenol B glucuronide galactosyltransferase 25498102 MTR_7g039550 -23.89 LOC11424969 auxin-responsive protein SAUR78 11424969 MTR_8g022380 -23.53 LOC11421236 probable LRR receptor-like serine/threonine-protein kinase At1g05700 11421236 MTR_8g014930 -23.24 LOC25497029 cycloartenol synthase-like 25497029 -23.24 LOC11432328 putative receptor protein kinase ZmPK1 11432328 MTR_3g102450 -23.17 LOC11446016 macrophage migration inhibitory factor homolog 11446016 MTR_4g127360 -23.13 LOC25483183 transcription factor ORG2 25483183 MTR_1g048710 -23.00 LOC25491416 solute carrier family 40 member 2 25491416 MTR_4g013245 -22.91 LOC11438555 albumin-1 11438555 MTR_7g044980 -22.80 LOC120575761 protein NRT1/ PTR FAMILY 5.2-like 120575761 -22.62 LOC11439650 plasma membrane ATPase 4 11439650 MTR_2g036650 -22.59 LOC25495653 uncharacterized LOC25495653 25495653 -22.36 LOC11425214 protein NRT1/ PTR FAMILY 5.2 11425214 MTR_7g098180 -22.18 LOC11418861 peroxidase 5 11418861 MTR_1g038680 -21.99 LOC11417965 albumin-1 11417965 MTR_3g067280 -21.89 LOC11406707 laccase-4 11406707 MTR_5g081810 -21.77 LOC25484754 putative indole-3-acetic acid-amido synthetase GH3.9 25484754 MTR_1g088765 -21.76 LOC11414774 zinc transporter 2 11414774 MTR_2g097580 -21.71 LOC11446990 putative transcription factor bHLH107 11446990 MTR_4g087920 -21.59 LOC11422589 albumin-1 11422589 MTR_3g067270 -21.23 LOC11440459 pleiotropic drug resistance protein 1 11440459 MTR_7g098760 -21.08 LOC25484875 putative bark agglutinin LECRPA3 25484875 MTR_1g090973 -21.07 LOC11435500 cytochrome P450 72A68-like 11435500 MTR_5g095230 -21.01 LOC11437333 cytochrome P450 93A3 11437333 MTR_7g092600 -20.92 LOC112419961 uncharacterized LOC112419961 112419961 -20.88 LOC11411832 MLP-like protein 34 11411832 MTR_8g045570 -20.76 LOC25500074 patatin-like protein 2 25500074 MTR_8g007125 -20.72 LOC11444027 fe(2+) transport protein 1 11444027 MTR_4g083570 -20.72 LOC11423983 auxin-binding protein ABP19a 11423983 MTR_8g020650 -20.58 LOC11427580 cycloartenol synthase-like 11427580 -20.56 LOC11422023 uncharacterized LOC11422023 11422023 MTR_2g030460 -20.53 LOC25491367 probable 2-oxoglutarate-dependent dioxygenase AOP1 25491367 MTR_4g011690 -20.46 LOC11425928 metal tolerance protein 4 11425928 MTR_5g075680 -20.44 LOC11445404 kunitz-type trypsin inhibitor-like 2 protein 11445404 MTR_6g044780 -20.38 LOC25486578 uncharacterized LOC25486578 25486578 -20.33 LOC25482351 rust resistance kinase Lr10 25482351 MTR_1g028280 -20.21 LOC11411472 uncharacterized LOC11411472 11411472 MTR_2g096670 -20.08 LOC11444460 probable O-methyltransferase 3 11444460 MTR_4g079160 -20.03 LOC11433170 Bowman-Birk type proteinase inhibitor 11433170 MTR_7g077210 -19.92 LOC11409295 pathogen-related protein 11409295 MTR_2g076070 -19.84 LOC11443024 putative receptor-like protein kinase At4g00960 11443024 MTR_3g079850 -19.83 LOC25483186 transcription factor ORG2 25483186 MTR_1g048750 -19.78 LOC25496179 uncharacterized LOC25496179 25496179 MTR_6g038010 -19.68 LOC11436499 cysteine-rich repeat secretory protein 55 11436499 MTR_7g052020 -19.60 LOC11420200 uncharacterized LOC11420200 11420200 MTR_6g078770 -19.60 LOC11438884 1-aminocyclopropane-1-carboxylate oxidase homolog 12 11438884 MTR_7g078010 -19.57 LOC11408575 probable protein phosphatase 2C 4 11408575 MTR_7g060770 -19.43 LOC25482480 WAT1-related protein At4g08290 25482480 MTR_1g030600 -19.36 LOC11405673 1-aminocyclopropane-1-carboxylate oxidase homolog 1 11405673 MTR_2g069020 -19.36 LOC11406788 WAT1-related protein At4g08290 11406788 MTR_3g072520 -19.31 LOC11412488 uncharacterized LOC11412488 11412488 MTR_4g069810 -19.24 LOC11419922 germin-like protein subfamily 3 member 1 11419922 MTR_8g020630 -19.15 LOC11408538 isoliquiritigenin 2'-O-methyltransferase 11408538 MTR_7g012070 -19.15 LOC11415593 protein Brevis radix-like 1 11415593 MTR_5g026970 -18.91 LOC25500921 GDSL esterase/lipase 1 25500921 MTR_8g031430 -18.80 LOC25491933 uncharacterized LOC25491933 25491933 -18.75 LOC25498361 G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300 25498361 MTR_7g056663 -18.64 LOC25491562 uncharacterized LOC25491562 25491562 -18.53 LOC11438408 E3 ubiquitin-protein ligase ATL76 11438408 MTR_8g092990 -18.48 LOC25492712 BURP domain-containing protein 9 25492712 MTR_4g069040 -18.48 LOC25479633 uncharacterized LOC25479633 25479633 -18.44 LOC11415333 uncharacterized LOC11415333 11415333 MTR_3g116440 -18.27 LOC112419036 protein SENSITIVE TO PROTON RHIZOTOXICITY 2-like 112419036 -18.26 LOC25489089 cytochrome P450 71D11 25489089 MTR_3g058210 -18.25 LOC11437945 protein NRT1/ PTR FAMILY 5.2 11437945 MTR_7g098220 -18.24 LOC25501341 carbonic anhydrase 2 25501341 MTR_8g064630 -18.24 LOC25499375 cytochrome P450 76A2 25499375 MTR_7g103450 -18.07 LOC11424101 ABC transporter B family member 15 11424101 MTR_6g008820 -18.00 LOC11444858 uncharacterized protein At1g76070 11444858 MTR_8g074760 -17.98 LOC11416555 probable LRR receptor-like serine/threonine-protein kinase At3g47570 11416555 MTR_5g026010 -17.96 LOC25489447 sugar transport protein 5 25489447 MTR_3g074390 -17.93 LOC25483417 uncharacterized LOC25483417 25483417 MTR_1g052640 -17.90 LOC25500289 uncharacterized LOC25500289 25500289 MTR_8g012675 -17.85 LOC25492025 uncharacterized LOC25492025 25492025 -17.82	Lower 100 Genes Symbol Function* Entrez Gene ID* Other ID PC LOC11433154 vestitone reductase 11433154 MTR_7g074730 -39.33 ENOD11 early nodulin-11 25490362 MTR_3g415670 -35.33 LOC120576871 probable terpene synthase 2 120576871 -34.71 LOC25491771 chloroplast envelope quinone oxidoreductase homolog 25491771 MTR_4g032995 -33.96 LOC25491784 chloroplast envelope quinone oxidoreductase homolog 25491784 MTR_4g033205 -33.74 LOC120576876 probable terpene synthase 2 120576876 -33.62 LOC11442801 kunitz-type trypsin inhibitor-like 2 protein 11442801 MTR_6g044810 -33.30 LOC11406039 protein TIFY 5A 11406039 MTR_8g107300 -33.23 LOC120576884 probable terpene synthase 2 120576884 -32.84 LOC120576874 probable terpene synthase 2 120576874 -32.24 LOC11427376 cytochrome P450 71D10 11427376 MTR_5g094540 -32.05 LOC11420518 protein TIFY 10a 11420518 MTR_5g013520 -32.02 LOC120576878 probable terpene synthase 2 120576878 -31.95 LOC120576881 probable terpene synthase 2 120576881 -31.92 LOC25498759 probable 2-oxoglutarate-dependent dioxygenase At5g05600 25498759 MTR_7g068650 -31.37 LOC25498399 probable terpene synthase 2 25498399 MTR_7g057390 -31.22 LOC25499201 phospholipase A1-Igamma2, chloroplastic-like 25499201 MTR_1995s0010 -31.15 LOC11414053 kunitz-type trypsin inhibitor-like 2 protein 11414053 MTR_6g065460 -30.70 LOC25499200 phospholipase A1-Igamma2, chloroplastic 25499200 MTR_7g096120 -30.42 LOC25490242 protein NRT1/ PTR FAMILY 8.1 25490242 MTR_3g112460 -30.24 LOC11431207 protein SIEVE ELEMENT OCCLUSION B 11431207 MTR_1g074990 -30.12 LOC25501700 stemmadenine O-acetyltransferase 25501700 MTR_8g079950 -30.09 LOC25493984 class V chitinase CHIT5b-like 25493984 MTR_4g117000 -29.46 LOC25486441 acidic endochitinase SE2 25486441 MTR_2g040650 -28.91 LOC11437104 cytochrome P450 71D10 11437104 MTR_5g094550 -28.51 LOC120575732 protein TIFY 10a-like 120575732 -27.98 LOC11442016 mitochondrial arginine transporter BAC2 11442016 MTR_2g102010 -27.13 LOC25487683 early nodulin-like protein 2 25487683 MTR_2g090580 -27.03 LOC120575746 (3S,6E)-nerolidol synthase 1-like 120575746 -26.68 LOC11408622 putative receptor-like protein kinase At3g47110 11408622 MTR_5g025850 -26.65 LOC11428623 linoleate 9S-lipoxygenase 11428623 MTR_8g020990 -26.65 LOC25490959 (3S,6E)-nerolidol synthase 1 25490959 MTR_3g465090 -26.46 LOC11413286 probable pectate lyase 5 11413286 MTR_3g086320 -26.25 LOC25492576 ervatamin-B 25492576 MTR_4g065077 -26.18 LOC25498751 GDSL esterase/lipase CPRD49 25498751 MTR_7g068550 -25.67 LOC120579365 (3S,6E)-nerolidol synthase 1-like 120579365 -25.58 LOC11441027 nucleoside-triphosphatase 11441027 MTR_7g085120 -25.49 LOC25481496 (3S,6E)-nerolidol synthase 1 25481496 MTR_0927s0010 -25.11 LOC25496335 kunitz-type trypsin inhibitor-like 2 protein 25496335 MTR_6g045097 -24.95 LOC25496947 lachrymatory-factor synthase 25496947 MTR_6g088475 -24.89 LOC25490355 repetitive proline-rich cell wall protein 1 25490355 MTR_3g415580 -24.78 LOC25490361 early nodulin-12-like 25490361 MTR_3g415650 -24.77 LOC120577043 probable terpene synthase 2 120577043 -24.23 LOC11431236 bidirectional sugar transporter SWEET14 11431236 MTR_3g098930 -23.94 LOC11438595 non-specific lipid transfer protein GPI-anchored 8 11438595 MTR_5g011960 -23.93 LOC11410789 wound-induced protein 1 11410789 MTR_3g031270 -23.78 LOC25488598 WAT1-related protein At5g07050 25488598 MTR_3g012420 -23.72 LOC25492621 linoleate 13S-lipoxygenase 2-1, chloroplastic 25492621 MTR_4g066170 -23.71 LOC11416905 subtilisin-like protease SBT3 11416905 MTR_7g079300 -23.68 LOC25496061 ABC transporter C family member 10 25496061 MTR_6g034755 -23.68 LOC25484870 putative bark agglutinin LECRPA3 25484870 MTR_1g090943 -23.51 LOC25496359 kunitz-type trypsin inhibitor-like 2 protein 25496359 MTR_6g045403 -23.47 LOC11427377 cytochrome P450 71D10 11427377 MTR_5g094560 -23.40 LOC11445404 kunitz-type trypsin inhibitor-like 2 protein 11445404 MTR_6g044780 -23.21 LOC25501099 uncharacterized LOC25501099 25501099 MTR_8g040940 -23.18 LOC11420276 65-kDa microtubule-associated protein 3 11420276 MTR_6g061690 -23.17 LOC11420410 probable 2-oxoglutarate-dependent dioxygenase At5g05600 11420410 MTR_4g015790 -23.16 LOC25490403 expansin-A15 25490403 MTR_3g435430 -23.13 LOC11417986 probable 2-oxoglutarate-dependent dioxygenase At5g05600 11417986 MTR_3g070860 -23.05 LOC25495194 probable zinc transporter 12 25495194 MTR_6g007687 -22.94 LOC25496866 cytochrome P450 CYP736A12 25496866 MTR_6g084770 -22.94 LOC25498942 ethylene-responsive transcription factor 1 25498942 MTR_7g081795 -22.60 LOC25489184 (3S,6E)-nerolidol synthase 1 25489184 MTR_3g063120 -22.37 LOC11446242 phospholipase A1-IIgamma 11446242 MTR_4g087810 -22.32 LOC11425847 E3 ubiquitin-protein ligase SINA-like 7 11425847 MTR_5g061290 -22.25 LOC25486798 isoliquiritigenin 2'-O-methyltransferase 25486798 MTR_2g055940 -22.24 LOC11425619 protein SIEVE ELEMENT OCCLUSION B 11425619 MTR_1g074950 -22.07 LOC120579845 isoflavone 4'-O-methyltransferase-like 120579845 -22.03 LOC11429026 carbonic anhydrase 2 11429026 MTR_3g077910 -21.97 LOC11419002 trans-cinnamate:CoA ligase, peroxisomal 11419002 MTR_3g064420 -21.95 LOC11424967 linoleate 9S-lipoxygenase 11424967 MTR_8g021020 -21.93 LOC25491783 isoflavone 4'-O-methyltransferase 25491783 MTR_4g033200 -21.77 LOC25495170 CASP-like protein N24 25495170 MTR_6g007160 -21.73 LOC25487950 embryo-specific protein ATS3 25487950 MTR_2g103313 -21.71 LOC11441045 non-specific lipid transfer protein GPI-anchored 7 11441045 MTR_5g011950 -21.71 LOC120575775 (3S,6E)-nerolidol synthase 1-like 120575775 -21.67 LOC120579435 (3S,6E)-nerolidol synthase 1-like 120579435 -21.53 LOC11423048 ABC transporter B family member 19 11423048 MTR_8g022270 -21.40 LOC120579686 (3S,6E)-nerolidol synthase 1-like 120579686 -21.33 LOC11422542 putative calcium-binding protein CML23 11422542 MTR_6g023460 -21.32 LOC120579433 (3S,6E)-nerolidol synthase 1-like 120579433 -21.27 LOC11431497 coniferyl alcohol acyltransferase 11431497 MTR_5g090880 -21.26 LOC25491776 isoflavone 4'-O-methyltransferase 25491776 MTR_4g033085 -21.26 LOC11424965 linoleate 9S-lipoxygenase 11424965 MTR_8g018570 -21.25 LOC11443354 ethylene-responsive transcription factor LEP 11443354 MTR_2g019750 -21.19 LOC11442929 uncharacterized LOC11442929 11442929 MTR_7g024890 -21.13 LOC25491781 isoflavone 4'-O-methyltransferase 25491781 MTR_4g033170 -21.09 LOC25498397 putative F-box protein At1g23770 25498397 MTR_7g057330 -21.04 LOC11416554 putative receptor-like protein kinase At3g47110 11416554 MTR_5g025840 -20.94 LOC11443850 protein TIFY 5A 11443850 MTR_2g019190 -20.69 LOC25498398 (-)-germacrene D synthase 25498398 MTR_7g057340 -20.61 LOC120579685 (3S,6E)-nerolidol synthase 1-like 120579685 -20.57 LOC11422379 receptor-like protein Cf-9 homolog 11422379 MTR_7g009510 -20.41 LOC25489617 linoleate 9S-lipoxygenase 1 25489617 MTR_3g081130 -20.38 LOC25491415 solute carrier family 40 member 2 25491415 MTR_4g013240 -20.31 LOC11435082 nuclear transcription factor Y subunit A-10 11435082 MTR_1g056530 -20.01 LOC11419455 citrate-binding protein 11419455 MTR_3g095340 -19.99 LOC25489098 uncharacterized LOC25489098 25489098 MTR_3g058320 -19.99 LOC25486443 acidic endochitinase 25486443 MTR_2g040690 -19.91 LOC11444178 early nodulin-20 11444178 MTR_4g130800 -19.90	Lower 100 Genes Symbol Function* Entrez Gene ID* Other ID PC LOC11415881 inducible nitrate reductase [NADH] 2 11415881 MTR_3g073180 -24.75 LOC11436058 EG45-like domain containing protein 11436058 MTR_3g107500 -23.53 LOC11408453 guanosine deaminase 11408453 MTR_2g045280 -21.36 LOC112416394 uncharacterized LOC112416394 112416394 -20.65 LOC25488053 pathogenesis-related protein 1 25488053 MTR_2g435490 -19.18 LOC11445037 senescence-specific cysteine protease SAG39 11445037 MTR_4g080700 -18.90 LOC11411940 peroxidase 10 11411940 MTR_5g017850 -18.68 LOC11428946 RING-H2 finger protein ATL78 11428946 MTR_8g093010 -18.50 LOC11407838 ABC transporter G family member STR2-like 11407838 MTR_5g030910 -17.81 LOC11440187 snakin-2 11440187 MTR_4g106860 -16.93 LOC112420427 uncharacterized LOC112420427 112420427 -16.87 LOC11441702 probable pectinesterase/pectinesterase inhibitor 12 11441702 -16.79 LOC11444647 transcription factor MYB106 11444647 MTR_4g082230 -16.73 LOC11438408 E3 ubiquitin-protein ligase ATL76 11438408 MTR_8g092990 -16.41 LOC11432324 probable isoaspartyl peptidase/L-asparaginase 2 11432324 MTR_3g102370 -16.40 LOC11429433 uncharacterized LOC11429433 11429433 MTR_8g012240 -16.29 LOC25487584 uncharacterized LOC25487584 25487584 MTR_2g089930 -16.11 LOC11443285 kunitz-type trypsin inhibitor-like 2 protein 11443285 MTR_6g059530 -16.05 LOC25492963 transcription factor MYB106 25492963 MTR_4g082290 -15.98 LOC11434079 uncharacterized LOC11434079 11434079 MTR_4g024370 -15.59 LOC11421410 AT-hook motif nuclear-localized protein 17 11421410 MTR_3g100470 -15.59 LOC11422698 uncharacterized LOC11422698 11422698 MTR_3g087270 -15.57 LOC11413806 abscisic acid receptor PYL4 11413806 MTR_3g071740 -15.53 LOC25485204 geraniol 8-hydroxylase 25485204 MTR_1g103680 -15.51 LOC11417770 pyruvate, phosphate dikinase, chloroplastic 11417770 MTR_4g118350 -15.47 LOC11436220 probable protein phosphatase 2C 8 11436220 MTR_5g009370 -15.41 LOC25484269 ethylene-response factor C3 25484269 MTR_1g069945 -15.36 LOC112419077 uncharacterized LOC112419077 112419077 -15.27 LOC25487009 putative carbonic anhydrase 2 25487009 MTR_2g069245 -15.22 LOC25481951 uncharacterized LOC25481951 25481951 MTR_1g013100 -15.21 LOC11410524 pectinesterase 11410524 MTR_3g008720 -15.06 LOC25490198 uncharacterized LOC25490198 25490198 MTR_3g111970 -15.04 LOC25496160 ethylene-responsive transcription factor ERF110 25496160 MTR_6g037610 -14.97 LOC120580041 uncharacterized LOC120580041 120580041 -14.94 LOC25483852 GDSL esterase/lipase At5g03610 25483852 MTR_1g060500 -14.74 LOC11438046 chaperone protein dnaJ 11, chloroplastic 11438046 MTR_8g075780 -14.69 LOC11433510 flotillin-like protein 4 11433510 MTR_3g106430 -14.68 LOC11425340 chaperone protein dnaJ 11, chloroplastic 11425340 MTR_5g022210 -14.67 LOC11409671 uncharacterized LOC11409671 11409671 -14.61 LOC25494212 peroxidase N 25494212 MTR_4g125940 -14.54 LOC11423326 serine--glyoxylate aminotransferase 11423326 MTR_5g090070 -14.50 LOC11444966 kunitz-type trypsin inhibitor-like 2 protein 11444966 MTR_6g059410 -14.46 LOC11405854 seven transmembrane protein 1 11405854 MTR_5g019120 -14.41 LOC11417476 glucan endo-1,3-beta-glucosidase 11417476 MTR_2g034480 -14.29 LOC25501012 AT-hook motif nuclear-localized protein 22 25501012 MTR_8g036060 -14.23 LOC25491632 pectinesterase 2 25491632 MTR_4g025690 -14.08 LOC11411483 chalcone synthase 1A 11411483 MTR_3g086260 -14.08 LOC11406332 calcium uniporter protein 2, mitochondrial 11406332 MTR_5g019350 -13.98 LOC11410374 inducible nitrate reductase [NADH] 2 11410374 MTR_3g073150 -13.94 LOC11443589 senescence-specific cysteine protease SAG39 11443589 MTR_4g107930 -13.93 LOC25484278 ethylene-responsive transcription factor 1B 25484278 MTR_1g070015 -13.69 LOC11425623 glu S.griseus protease inhibitor 11425623 MTR_1g075340 -13.55 LOC25491732 repetitive proline-rich cell wall protein 1 25491732 MTR_4g029600 -13.51 LOC112421195 uncharacterized LOC112421195 112421195 -13.50 LOC11426986 alpha-L-arabinofuranosidase 1 11426986 MTR_7g087890 -13.41 LOC11443318 ethylene-response factor C3 11443318 MTR_2g015050 -13.38 LOC11443733 uncharacterized LOC11443733 11443733 MTR_1g110550 -13.35 LOC11431728 probable inactive poly [ADP-ribose] polymerase SRO2 11431728 MTR_3g077870 -13.33 LOC11409904 patatin-like protein 1 11409904 MTR_5g017670 -13.21 LOC25484438 early nodulin-75-like 25484438 -13.15 LOC25491731 repetitive proline-rich cell wall protein 2 25491731 MTR_4g029550 -13.15 LOC11405418 ethylene-responsive transcription factor ERF110 11405418 MTR_1g098460 -13.13 LOC11430634 zinc finger CCCH domain-containing protein 20 11430634 MTR_3g103960 -13.01 LOC25484569 methionine gamma-lyase 25484569 MTR_1g077890 -12.99 LOC25498595 protein SRG1 25498595 MTR_7g063730 -12.90 LOC11405889 probable sucrose-phosphate synthase 2 11405889 MTR_3g047380 -12.90 LOC11444700 phospholipase A1-IIgamma 11444700 MTR_4g087830 -12.86 LOC25500072 patatin-like protein 2 25500072 MTR_8g007095 -12.82 LOC11407135 uncharacterized LOC11407135 11407135 MTR_4g102220 -12.81 LOC25487590 uncharacterized LOC25487590 25487590 MTR_2g089965 -12.79 LOC11439716 uncharacterized LOC11439716 11439716 MTR_4g114080 -12.78 LOC25500289 uncharacterized LOC25500289 25500289 MTR_8g012675 -12.72 LOC11411133 metalloendoproteinase 1 11411133 MTR_5g036360 -12.72 LOC11411514 alcohol dehydrogenase 1 11411514 MTR_3g089970 -12.63 LOC11416716 probable O-methyltransferase 3 11416716 MTR_5g074600 -12.63 LOC11431897 NAC transcription factor 47 11431897 MTR_7g085220 -12.59 LOC25493067 2-hydroxyisoflavanone synthase 25493067 MTR_4g088160 -12.57 LOC112417234 uncharacterized LOC112417234 112417234 -12.51 LOC25493154 uncharacterized LOC25493154 25493154 MTR_4g088760 -12.47 LOC11419321 uncharacterized LOC11419321 11419321 MTR_6g078630 -12.47 LOC25485576 ferredoxin, root R-B1 25485576 MTR_1g112050 -12.45 LOC25500300 defensin-like protein 19 25500300 MTR_8g012775 -12.44 LOC25484847 leghemoglobin 29 25484847 MTR_1g090820 -12.39 LOC120575761 protein NRT1/ PTR FAMILY 5.2-like 120575761 -12.26 LOC11430507 protein PSK SIMULATOR 1 11430507 MTR_1g061540 -12.19 LOC11410963 uncharacterized LOC11410963 11410963 MTR_5g025800 -12.12 LOC11426979 uncharacterized LOC11426979 11426979 MTR_7g055630 -12.12 LOC25484541 alpha-galactosidase 25484541 MTR_1g077520 -12.08 LOC11415031 uncharacterized LOC11415031 11415031 MTR_3g087280 -12.04 LOC11415767 tubulin beta chain 11415767 MTR_8g107250 -11.98 LOC25502309 uncharacterized LOC25502309 25502309 MTR_8g432460 -11.92 LOC11419026 F-box/kelch-repeat protein At2g44130 11419026 MTR_8g085650 -11.92 LOC11420916 cysteine proteinase inhibitor 11420916 MTR_5g088770 -11.91 LOC25502307 BON1-associated protein 2 25502307 MTR_8g432420 -11.91 LOC25487213 probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 25487213 MTR_2g073540 -11.89 LOC11421602 cationic peroxidase 2 11421602 MTR_2g008710 -11.83 LOC25484359 uncharacterized LOC25484359 25484359 -11.80 LOC11422381 AP2/ERF and B3 domain-containing transcription factor RAV1 11422381 MTR_1g093600 -11.68 LOC11437801 polygalacturonase inhibitor-like 11437801 -11.61 LOC120580589 RING-H2 finger protein ATL66-like 120580589 -11.58	Lower 100 Genes Symbol Function* Entrez Gene ID* Other ID PC LOC11415669 dormancy-associated protein homolog 3 11415669 MTR_1g083440 -37.10 LOC11412566 cold-regulated protein 27 11412566 MTR_1g019360 -32.71 LOC25500232 putative disease resistance protein RGA1 25500232 MTR_8g010440 -26.07 LOC25482432 F-box protein SKP2A 25482432 MTR_1g029500 -24.48 LOC25490762 uncharacterized LOC25490762 25490762 MTR_3g462220 -24.43 LOC11446161 uncharacterized LOC11446161 11446161 MTR_4g039540 -24.38 LOC25497250 dehydration-responsive element-binding protein 1E 25497250 MTR_6g465690 -24.03 LOC11413741 uncharacterized LOC11413741 11413741 MTR_5g082130 -24.00 LOC25491842 21 kDa protein 25491842 MTR_4g035905 -23.18 LOC25491738 repetitive proline-rich cell wall protein 25491738 MTR_4g029730 -22.78 LOC25486226 chaperonin-like RBCX protein 1, chloroplastic 25486226 MTR_2g024300 -22.55 LOC11420648 chaperone protein dnaJ C76, chloroplastic 11420648 MTR_1g038430 -22.48 LOC25502128 uncharacterized LOC25502128 25502128 MTR_8g099065 -21.74 LOC11443511 spermidine hydroxycinnamoyl transferase 11443511 MTR_3g049150 -21.53 LOC11414888 universal stress protein PHOS32 11414888 MTR_1g087200 -20.57 LOC11438460 beta-amylase 3, chloroplastic 11438460 MTR_5g013620 -20.42 LOC11415876 WAT1-related protein At4g08290 11415876 MTR_3g072560 -20.16 LOC11437940 thioredoxin-like 3-1, chloroplastic 11437940 MTR_7g093490 -20.03 LOC11425362 spermidine coumaroyl-CoA acyltransferase 11425362 MTR_4g055170 -19.66 LOC25496102 soyasapogenol B glucuronide galactosyltransferase 25496102 MTR_6g035295 -19.57 LOC11407113 indole-3-acetic acid-amido synthetase GH3.6 11407113 MTR_2g081860 -19.47 LOC11440532 desmethyl-deoxy-podophyllotoxin synthase 11440532 MTR_3g057800 -19.18 LOC25500602 protein DMR6-LIKE OXYGENASE 2 25500602 MTR_8g024120 -19.11 LOC11441816 probable LRR receptor-like serine/threonine-protein kinase At1g06840 11441816 MTR_7g021570 -18.88 LOC11420081 uncharacterized LOC11420081 11420081 MTR_6g023190 -18.88 LOC25496855 dehydrin DHN1 25496855 MTR_6g084640 -18.86 LOC11407838 ABC transporter G family member STR2-like 11407838 MTR_5g030910 -18.79 LOC25493224 PAP-specific phosphatase HAL2-like 25493224 MTR_4g090525 -18.57 LOC120580035 uncharacterized LOC120580035 120580035 -18.41 LOC11435974 zinc finger protein CONSTANS-LIKE 9 11435974 MTR_3g082630 -18.18 LOC25481951 uncharacterized LOC25481951 25481951 MTR_1g013100 -18.09 LOC11418940 probable 2-oxoglutarate-dependent dioxygenase At5g05600 11418940 MTR_5g082750 -17.97 LOC11437345 two-component response regulator-like APRR9 11437345 MTR_3g092780 -17.61 LOC11412046 uncharacterized LOC11412046 11412046 MTR_4g103840 -17.51 LOC11419467 peroxidase A2 11419467 MTR_7g093370 -17.43 LOC25498392 albumin-1 D 25498392 MTR_7g056817 -17.39 LOC11422454 uncharacterized LOC11422454 11422454 MTR_1g017920 -17.10 LOC11430020 SNF1-related protein kinase regulatory subunit gamma-like PV42a 11430020 MTR_2g103910 -16.96 LOC11412982 UPF0481 protein At3g47200 11412982 MTR_6g010810 -16.93 LOC11417024 adagio protein 3 11417024 MTR_8g105590 -16.89 LOC25493011 secoisolariciresinol dehydrogenase 25493011 MTR_4g084800 -16.67 LOC25486501 auxin-binding protein ABP19a 25486501 MTR_2g041550 -16.65 LOC11424647 endonuclease 2 11424647 MTR_1g110510 -16.43 LOC11425239 transcription factor bHLH94 11425239 MTR_8g066770 -16.36 LOC11427330 leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 11427330 MTR_5g061510 -16.32 LOC11443454 CCG-binding protein 1 11443454 MTR_4g087160 -16.28 LOC25500634 uncharacterized LOC25500634 25500634 -16.26 LOC11405634 uncharacterized LOC11405634 11405634 MTR_5g020060 -16.16 LOC11417880 calmodulin-like protein 4 11417880 MTR_1g019660 -16.06 LOC25500303 uncharacterized LOC25500303 25500303 -16.02 LOC11444674 protein DETOXIFICATION 43 11444674 MTR_8g036660 -15.99 LOC120575980 soyasapogenol B glucuronide galactosyltransferase-like 120575980 -15.92 LOC25487954 uncharacterized LOC25487954 25487954 MTR_2g103795 -15.88 LOC11407700 (-)-isopiperitenol/(-)-carveol dehydrogenase, mitochondrial 11407700 MTR_6g023910 -15.87 LOC11435203 uncharacterized acetyltransferase At3g50280 11435203 MTR_3g101960 -15.81 LOC25499435 secoisolariciresinol dehydrogenase 25499435 MTR_7g105560 -15.79 LOC11414396 dormancy-associated protein homolog 4 11414396 MTR_8g022300 -15.77 LOC11411604 uncharacterized LOC11411604 11411604 MTR_3g116950 -15.71 LOC11410426 uncharacterized LOC11410426 11410426 MTR_4g095330 -15.56 LOC11431897 NAC transcription factor 47 11431897 MTR_7g085220 -15.53 LOC25499451 transcription repressor OFP13 25499451 MTR_7g105780 -15.51 LOC11432338 heat stress transcription factor B-4b 11432338 MTR_5g089170 -15.51 LOC25481672 probable flavin-containing monooxygenase 1 25481672 MTR_1372s0010 -15.50 LOC25480973 NAD(P)H-dependent 6'-deoxychalcone synthase 25480973 MTR_0374s0050 -15.50 LOC25490501 transcription factor PRE3 25490501 MTR_3g438070 -15.49 LOC11412582 protein JINGUBANG 11412582 MTR_1g021590 -15.47 LOC25487204 geraniol 8-hydroxylase 25487204 MTR_2g073420 -15.47 LOC11436793 light-regulated protein 1, chloroplastic 11436793 MTR_7g084000 -15.46 LOC11444966 kunitz-type trypsin inhibitor-like 2 protein 11444966 MTR_6g059410 -15.46 LOC11446330 cytochrome P450 704C1 11446330 MTR_8g035780 -15.43 LOC25491837 21 kDa protein 25491837 MTR_4g035880 -15.38 LOC25498962 ethylene-responsive transcription factor LEP 25498962 MTR_7g084370 -15.36 LOC11443438 cold-regulated protein 28 11443438 MTR_4g085990 -15.35 LOC25484569 methionine gamma-lyase 25484569 MTR_1g077890 -15.30 LOC11443541 uncharacterized LOC11443541 11443541 MTR_3g055450 -15.28 LOC11415570 uncharacterized LOC11415570 11415570 MTR_5g032960 -15.20 rps4 ribosomal protein S4 26974350 A0S16_gp04 -15.17 LOC11412297 transcription factor MYB16 11412297 MTR_6g012690 -15.13 LOC25492523 probable serine/threonine-protein kinase PBL10 25492523 MTR_4g063935 -15.06 LOC25492467 dirigent protein 9 25492467 MTR_4g062460 -15.06 LOC120578019 uncharacterized LOC120578019 120578019 -15.04 LOC11438046 chaperone protein dnaJ 11, chloroplastic 11438046 MTR_8g075780 -14.94 LOC11408453 guanosine deaminase 11408453 MTR_2g045280 -14.91 LOC11429548 late embryogenesis abundant protein At3g53040 11429548 MTR_1g061730 -14.88 LOC11414235 transcription factor ALC 11414235 MTR_1g019240 -14.86 LOC25492525 probable serine/threonine-protein kinase PBL9 25492525 MTR_4g063945 -14.82 LOC11413753 aldehyde dehydrogenase family 3 member F1 11413753 MTR_8g076480 -14.77 LOC25485262 cysteine-rich receptor-like protein kinase 25 25485262 MTR_1g105615 -14.76 LOC25480075 cytochrome P450 71D11 25480075 MTR_0059s0170 -14.69 LOC11421063 ferritin-2, chloroplastic 11421063 MTR_5g083170 -14.64 LOC25484493 uncharacterized LOC25484493 25484493 MTR_1g076800 -14.58 LOC25492610 lysine-specific demethylase JMJ30 25492610 MTR_4g066020 -14.54 LOC120580319 uncharacterized LOC120580319 120580319 -14.48 LOC11439428 beta-amylase 3, chloroplastic 11439428 MTR_5g013640 -14.46 LOC25488051 curved DNA-binding protein 25488051 MTR_2g435450 -14.43 LOC11429972 chloroplastic lipocalin 11429972 MTR_5g092080 -14.41 LOC25489740 2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial 25489740 MTR_3g088845 -14.34 LOC11418508 peroxidase P7 11418508 MTR_3g094650 -14.28 LOC25484175 probable indole-3-pyruvate monooxygenase YUCCA9 25484175 MTR_1g069275 -14.27 LOC120579430 cytochrome P450 71D11-like 120579430 -14.20