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1 SRP071226 RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391)
loading
run
annotation
attributes
2.4742
SRR3207725
gene perturbation type knockdown of LIM1 | batch of trees NSF2
2.3499
SRR3207782
gene perturbation type knockdown of LIM1,LIM2 | batch of trees NSF2
2.3394
SRR3207740
gene perturbation type knockdown of LIM2 | batch of trees NSF2
-2.4168
SRR3207855
gene perturbation type knockdown of C3H3, C4H1 and C4H2 | batch of trees NSF3
-2.4218
SRR3207818
gene perturbation type knockdown of C3H3 | batch of trees NSF3
-2.9639
SRR3207918
gene perturbation type wild type control | batch of trees NSF4
2 SRP103219 Differential gene expression analysis of drought responsive sense and antisense genes in Populus
loading
run
annotation
attributes
0.8762
SRR5423543
source_name drought treated_long-term_mature leaves | type drought treated | drought treatment long-term | tissue mature leaves | molecule subtype mRNA
0.7918
SRR5423435
source_name drought treated_short-term_mature leaves | type drought treated | drought treatment short-term | tissue mature leaves | molecule subtype total RNA
0.7891
SRR5423426
source_name drought treated_short-term_mature leaves | type drought treated | drought treatment short-term | tissue mature leaves | molecule subtype total RNA
-1.9313
SRR5423555
source_name control_long-term_root | type control | drought treatment long-term | tissue root | molecule subtype mRNA
-1.9851
SRR5423590
source_name drought treated_long-term_root | type drought treated | drought treatment long-term | tissue root | molecule subtype mRNA
-2.0447
SRR5423572
source_name control_long-term_root | type control | drought treatment long-term | tissue root | molecule subtype mRNA
3 SRP201788 A genome assembly and the somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa [RNA-Seq]
loading
run
annotation
attributes
2.3889
SRR9668903
1.8274
SRR9668908
1.4956
SRR9668923
-1.4092
SRR9668925
-1.5202
SRR9668916
-1.6444
SRR9668917
4 SRP035471 Ptr-miR397a is a negative regulator of laccase genes affecting lignin content in Populus trichocarpa
loading
run
annotation
attributes
1.4178
SRR1121298
genotype over expression miR397a
1.0865
SRR1121303
genotype wild type
1.0108
SRR1121301
genotype wild type
-1.2097
SRR1121292
genotype over expression miR397a
-1.2396
SRR1121295
genotype over expression miR397a
-1.5173
SRR1121302
genotype wild type
5 SRP028843 SND1 Transcription Factor-Directed Quantitative Functional Hierarchical Genetic Regulatory Network in Wood Formation in Populus trichocarpa
loading
run
annotation
attributes
1.1944
SRR952902
transfection time 25 hours | overexpressed gene PtrSND1-B1+sGFP
1.0801
SRR952903
transfection time 25 hours | overexpressed gene PtrSND1-B1+sGFP
1.0412
SRR952893
transfection time 25 hours | overexpressed gene sGFP (control)
-0.791
SRR952889
transfection time 12 hours | overexpressed gene sGFP (control)
-0.8535
SRR952890
transfection time 12 hours | overexpressed gene sGFP (control)
-1.5157
SRR952892
transfection time 25 hours | overexpressed gene sGFP (control)
6 SRP074300 RNA-seq of major tissues and xylem cell types of Populus trichocarpa
loading
run
annotation
attributes
0.5593
SRR3473006
source_name Xylem fiber cells | tissue Xylem | cell type Fiber cell
0.5405
SRR3473011
source_name Xylem vessel cells | tissue Xylem | cell type Vessel cell
0.509
SRR3473008
source_name Xylem fiber cells | tissue Xylem | cell type Fiber cell
-0.5018
SRR3473002
source_name Primary root | tissue Primary root
-0.635
SRR3472991
source_name Shoot tip | tissue Shoot tip
-0.7927
SRR3473003
source_name Stem differentiating xylem | tissue Stem differentiating xylem
7 ERP021848 High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
loading
run
annotation
attributes
1.1239
ERR1864426
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102882418 | INSDC last update 2017-03-01T23:45:20Z | Submitter Id E-MTAB-5540:Leaf-short-term-cold-replicate-1 | organism part vascular leaf | sample name E-MTAB-5540:Leaf-short-term-cold-replicate-1
1.0954
ERR1864427
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102883168 | INSDC last update 2017-03-01T23:45:20Z | Submitter Id E-MTAB-5540:Leaf-short-term-cold-replicate-2 | organism part vascular leaf | sample name E-MTAB-5540:Leaf-short-term-cold-replicate-2
0.9813
ERR1864428
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102883918 | INSDC last update 2017-03-01T23:45:20Z | Submitter Id E-MTAB-5540:Leaf-short-term-cold-replicate-3 | organism part vascular leaf | sample name E-MTAB-5540:Leaf-short-term-cold-replicate-3
-0.7337
ERR1864478
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102921418 | INSDC last update 2017-03-01T23:45:21Z | Submitter Id E-MTAB-5540:Stem-xylem-prolonged-salt-replicate-2 | organism part stem xylem | sample name E-MTAB-5540:Stem-xylem-prolonged-salt-replicate-2
-0.7508
ERR1864450
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102900418 | INSDC last update 2017-03-01T23:45:21Z | Submitter Id E-MTAB-5540:Root-prolonged-salt-replicate-1 | organism part root | sample name E-MTAB-5540:Root-prolonged-salt-replicate-1
-0.781
ERR1864458
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102906418 | INSDC last update 2017-03-01T23:45:21Z | Submitter Id E-MTAB-5540:Root-short-term-drought-replicate-3 | organism part root | sample name E-MTAB-5540:Root-short-term-drought-replicate-3
8 SRP072040 RNAseq of drought treated Populus trichocarpa
loading
run
annotation
attributes
0.4776
SRR3241527
days after drought treatment 0 day
0.2912
SRR3241536
days after drought treatment 7 day
0.2214
SRR3241538
days after drought treatment 7 day
-0.1989
SRR3241533
days after drought treatment 5 day
-0.2298
SRR3241537
days after drought treatment 7 day
-0.6562
SRR3241532
days after drought treatment 5 day
9 SRP271234 RNAseq of transfected protoplasts of Populus trichocarpa
loading
run
annotation
attributes
0.4218
SRR12192594
transfected genes PtrMYB092
0.4177
SRR12192595
transfected genes PtrMYB092
0.2444
SRR12192589
transfected genes PtrHSFB3-1
-0.2037
SRR12192593
transfected genes PtrMYB092
-0.6548
SRR12192579
transfected genes GFP
-0.6548
SRR12192578
transfected genes GFP
10 SRP072680 Populus trichocarpa Transcriptome or Gene expression
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run
annotation
attributes
0.5439
SRR3317474
isolate tree4 | tissue xylem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95635
0.2861
SRR3317208
isolate tree3 | tissue xylem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95633
0.1791
SRR3317482
isolate tree6 | tissue phloem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95638
-0.2731
SRR3317483
isolate tree6 | tissue xylem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95639
-0.3107
SRR3317181
isolate tree1 | tissue phloem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95628
-0.4803
SRR3317201
isolate tree2 | tissue phloem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95630
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1 ERP021848 High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
loading
run
annotation
attributes
0.7207
ERR1864431
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102886168 | INSDC last update 2017-03-01T23:45:20Z | Submitter Id E-MTAB-5540:Leaf-short-term-drought-replicate-3 | organism part vascular leaf | sample name E-MTAB-5540:Leaf-short-term-drought-replicate-3
0.7022
ERR1864430
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102885418 | INSDC last update 2017-03-01T23:45:20Z | Submitter Id E-MTAB-5540:Leaf-short-term-drought-replicate-2 | organism part vascular leaf | sample name E-MTAB-5540:Leaf-short-term-drought-replicate-2
0.6868
ERR1864435
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102889168 | INSDC last update 2017-03-01T23:45:20Z | Submitter Id E-MTAB-5540:Leaf-short-term-salt-replicate-1 | organism part vascular leaf | sample name E-MTAB-5540:Leaf-short-term-salt-replicate-1
-0.5688
ERR1864481
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102923668 | INSDC last update 2017-03-01T23:45:22Z | Submitter Id E-MTAB-5540:Stem-xylem-short-term-cold-replicate-2 | organism part stem xylem | sample name E-MTAB-5540:Stem-xylem-short-term-cold-replicate-2
-0.5953
ERR1864482
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102924418 | INSDC last update 2017-03-01T23:45:22Z | Submitter Id E-MTAB-5540:Stem-xylem-short-term-cold-replicate-3 | organism part stem xylem | sample name E-MTAB-5540:Stem-xylem-short-term-cold-replicate-3
-0.6049
ERR1864480
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102922918 | INSDC last update 2017-03-01T23:45:22Z | Submitter Id E-MTAB-5540:Stem-xylem-short-term-cold-replicate-1 | organism part stem xylem | sample name E-MTAB-5540:Stem-xylem-short-term-cold-replicate-1
2 SRP074300 RNA-seq of major tissues and xylem cell types of Populus trichocarpa
loading
run
annotation
attributes
0.6016
SRR3472994
source_name Leaf | tissue Leaf
0.5977
SRR3472995
source_name Leaf | tissue Leaf
0.5142
SRR3472996
source_name Leaf | tissue Leaf
-0.4321
SRR3473004
source_name Stem differentiating xylem | tissue Stem differentiating xylem
-0.4633
SRR3473003
source_name Stem differentiating xylem | tissue Stem differentiating xylem
-0.6042
SRR3473005
source_name Stem differentiating xylem | tissue Stem differentiating xylem
3 SRP071226 RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391)
loading
run
annotation
attributes
0.7141
SRR3208011
gene perturbation type knockdown of 4CL5 | batch of trees NSF6
0.7107
SRR3207879
gene perturbation type knockdown of C4H1 | batch of trees NSF4
0.6811
SRR3207972
gene perturbation type knockdown of HCT1,HCT6 | batch of trees NSF5
-0.5886
SRR3207742
gene perturbation type knockdown of LIM2 | batch of trees NSF2
-0.5911
SRR3207732
gene perturbation type knockdown of LIM1 | batch of trees NSF2
-0.5953
SRR3207778
gene perturbation type knockdown of LIM1,LIM2 | batch of trees NSF2
4 SRP103219 Differential gene expression analysis of drought responsive sense and antisense genes in Populus
loading
run
annotation
attributes
0.4718
SRR5423422
source_name drought treated_short-term_mature leaves | type drought treated | drought treatment short-term | tissue mature leaves | molecule subtype total RNA
0.4681
SRR5423423
source_name drought treated_short-term_mature leaves | type drought treated | drought treatment short-term | tissue mature leaves | molecule subtype total RNA
0.4669
SRR5423425
source_name drought treated_short-term_mature leaves | type drought treated | drought treatment short-term | tissue mature leaves | molecule subtype total RNA
-0.5743
SRR5423564
source_name control_long-term_root | type control | drought treatment long-term | tissue root | molecule subtype mRNA
-0.5747
SRR5423565
source_name control_long-term_root | type control | drought treatment long-term | tissue root | molecule subtype mRNA
-0.5764
SRR5423567
source_name control_long-term_root | type control | drought treatment long-term | tissue root | molecule subtype mRNA
5 SRP072040 RNAseq of drought treated Populus trichocarpa
loading
run
annotation
attributes
0.4999
SRR3241537
days after drought treatment 7 day
0.4001
SRR3241535
days after drought treatment 7 day
0.3949
SRR3241538
days after drought treatment 7 day
-0.2872
SRR3241530
days after drought treatment 0 day
-0.4806
SRR3241529
days after drought treatment 0 day
-0.5607
SRR3241528
days after drought treatment 0 day
6 SRP201788 A genome assembly and the somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa [RNA-Seq]
loading
run
annotation
attributes
0.5148
SRR9668929
0.5064
SRR9668920
0.4419
SRR9668930
-0.3203
SRR9321774
-0.3591
SRR9668898
-0.5048
SRR9668903
7 SRP072680 Populus trichocarpa Transcriptome or Gene expression
loading
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annotation
attributes
0.2458
SRR3317473
isolate tree4 | tissue phloem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95634
0.2378
SRR3317476
isolate tree5 | tissue phloem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95636
0.1209
SRR3317207
isolate tree3 | tissue phloem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95632
-0.1994
SRR3317189
isolate tree1 | tissue xylem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95629
-0.2722
SRR3317208
isolate tree3 | tissue xylem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95633
-0.2823
SRR3317480
isolate tree5 | tissue xylem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95637
8 SRP035471 Ptr-miR397a is a negative regulator of laccase genes affecting lignin content in Populus trichocarpa
loading
run
annotation
attributes
0.1438
SRR1121292
genotype over expression miR397a
0.1139
SRR1121297
genotype over expression miR397a
0.0753
SRR1121295
genotype over expression miR397a
-0.2225
SRR1121303
genotype wild type
-0.2292
SRR1121299
genotype over expression miR397a
-0.2378
SRR1121301
genotype wild type
9 SRP028843 SND1 Transcription Factor-Directed Quantitative Functional Hierarchical Genetic Regulatory Network in Wood Formation in Populus trichocarpa
loading
run
annotation
attributes
0.4592
SRR952892
transfection time 25 hours | overexpressed gene sGFP (control)
0.1934
SRR952889
transfection time 12 hours | overexpressed gene sGFP (control)
0.1533
SRR952890
transfection time 12 hours | overexpressed gene sGFP (control)
-0.1171
SRR952899
transfection time 12 hours | overexpressed gene PtrSND1-B1+sGFP
-0.166
SRR952886
transfection time 7 hours | overexpressed gene sGFP (control)
-0.1728
SRR952895
transfection time 7 hours | overexpressed gene PtrSND1-B1+sGFP
10 SRP271234 RNAseq of transfected protoplasts of Populus trichocarpa
loading
run
annotation
attributes
0.1012
SRR12192586
transfected genes PtrHSFB3-1
0.0976
SRR12192587
transfected genes PtrHSFB3-1
0.0929
SRR12192581
transfected genes GFP
-0.1064
SRR12192590
transfected genes PtrMYB092
-0.1293
SRR12192595
transfected genes PtrMYB092
-0.1308
SRR12192594
transfected genes PtrMYB092
Loading
1 SRP071226 RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391)
loading
run
annotation
attributes
0.5493
SRR3208017
gene perturbation type knockdown of 4CL3,4CL5 | batch of trees NSF6
0.5416
SRR3207748
gene perturbation type knockdown of MYB167 | batch of trees NSF2
0.5325
SRR3207695
gene perturbation type knockdown of PAL3 | batch of trees NSF1
-0.5899
SRR3207795
gene perturbation type knockdown of PAL1,PAL3 | batch of trees NSF2
-0.6116
SRR3207801
gene perturbation type knockdown of PAL1,PAL3 | batch of trees NSF2
-0.6401
SRR3207796
gene perturbation type knockdown of PAL1,PAL3 | batch of trees NSF2
2 SRP074300 RNA-seq of major tissues and xylem cell types of Populus trichocarpa
loading
run
annotation
attributes
0.5198
SRR3473000
source_name Primary root | tissue Primary root
0.516
SRR3473001
source_name Primary root | tissue Primary root
0.4744
SRR3473002
source_name Primary root | tissue Primary root
-0.4619
SRR3472995
source_name Leaf | tissue Leaf
-0.506
SRR3472991
source_name Shoot tip | tissue Shoot tip
-0.5135
SRR3472996
source_name Leaf | tissue Leaf
3 SRP103219 Differential gene expression analysis of drought responsive sense and antisense genes in Populus
loading
run
annotation
attributes
0.8019
SRR5423577
source_name drought treated_long-term_root | type drought treated | drought treatment long-term | tissue root | molecule subtype mRNA
0.8019
SRR5423580
source_name drought treated_long-term_root | type drought treated | drought treatment long-term | tissue root | molecule subtype mRNA
0.8019
SRR5423582
source_name drought treated_long-term_root | type drought treated | drought treatment long-term | tissue root | molecule subtype mRNA
-0.4968
SRR5423321
source_name control_short-term_apex | type control | drought treatment short-term | tissue apex | molecule subtype total RNA
-0.4976
SRR5423304
source_name control_short-term_apex | type control | drought treatment short-term | tissue apex | molecule subtype total RNA
-0.4978
SRR5423315
source_name control_short-term_apex | type control | drought treatment short-term | tissue apex | molecule subtype total RNA
4 SRP201788 A genome assembly and the somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa [RNA-Seq]
loading
run
annotation
attributes
0.5158
SRR9668903
0.4412
SRR9668908
0.3385
SRR9668919
-0.3275
SRR9668925
-0.3988
SRR9668916
-0.486
SRR9668917
5 SRP072040 RNAseq of drought treated Populus trichocarpa
loading
run
annotation
attributes
0.3483
SRR3241538
days after drought treatment 7 day
0.3189
SRR3241535
days after drought treatment 7 day
0.2659
SRR3241531
days after drought treatment 5 day
-0.3008
SRR3241530
days after drought treatment 0 day
-0.3482
SRR3241529
days after drought treatment 0 day
-0.4468
SRR3241528
days after drought treatment 0 day
6 SRP035471 Ptr-miR397a is a negative regulator of laccase genes affecting lignin content in Populus trichocarpa
loading
run
annotation
attributes
0.4405
SRR1121298
genotype over expression miR397a
0.1404
SRR1121303
genotype wild type
0.1286
SRR1121297
genotype over expression miR397a
-0.1888
SRR1121292
genotype over expression miR397a
-0.3527
SRR1121295
genotype over expression miR397a
-0.4289
SRR1121302
genotype wild type
7 ERP021848 High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
loading
run
annotation
attributes
0.537
ERR1864456
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102904918 | INSDC last update 2017-03-01T23:45:21Z | Submitter Id E-MTAB-5540:Root-short-term-drought-replicate-1 | organism part root | sample name E-MTAB-5540:Root-short-term-drought-replicate-1
0.4825
ERR1864445
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102896668 | INSDC last update 2017-03-01T23:45:20Z | Submitter Id E-MTAB-5540:Root-prolonged-drought-replicate-2 | organism part root | sample name E-MTAB-5540:Root-prolonged-drought-replicate-2
0.4589
ERR1864446
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102897418 | INSDC last update 2017-03-01T23:45:20Z | Submitter Id E-MTAB-5540:Root-prolonged-drought-replicate-3 | organism part root | sample name E-MTAB-5540:Root-prolonged-drought-replicate-3
-0.4021
ERR1864411
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102871168 | INSDC last update 2017-03-01T23:45:19Z | Submitter Id E-MTAB-5540:Leaf-control-untreated-replicate-1 | organism part vascular leaf | sample name E-MTAB-5540:Leaf-control-untreated-replicate-1
-0.4082
ERR1864414
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102873418 | INSDC last update 2017-03-01T23:45:19Z | Submitter Id E-MTAB-5540:Leaf-prolonged-cold-replicate-1 | organism part vascular leaf | sample name E-MTAB-5540:Leaf-prolonged-cold-replicate-1
-0.4193
ERR1864413
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102872668 | INSDC last update 2017-03-01T23:45:19Z | Submitter Id E-MTAB-5540:Leaf-control-untreated-replicate-3 | organism part vascular leaf | sample name E-MTAB-5540:Leaf-control-untreated-replicate-3
8 SRP072680 Populus trichocarpa Transcriptome or Gene expression
loading
run
annotation
attributes
0.2594
SRR3317476
isolate tree5 | tissue phloem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95636
0.2298
SRR3317474
isolate tree4 | tissue xylem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95635
0.0677
SRR3317473
isolate tree4 | tissue phloem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95634
-0.085
SRR3317482
isolate tree6 | tissue phloem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95638
-0.1138
SRR3317181
isolate tree1 | tissue phloem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95628
-0.2568
SRR3317483
isolate tree6 | tissue xylem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95639
9 SRP028843 SND1 Transcription Factor-Directed Quantitative Functional Hierarchical Genetic Regulatory Network in Wood Formation in Populus trichocarpa
loading
run
annotation
attributes
0.2303
SRR952902
transfection time 25 hours | overexpressed gene PtrSND1-B1+sGFP
0.2191
SRR952903
transfection time 25 hours | overexpressed gene PtrSND1-B1+sGFP
0.2136
SRR952893
transfection time 25 hours | overexpressed gene sGFP (control)
-0.1492
SRR952888
transfection time 7 hours | overexpressed gene sGFP (control)
-0.1539
SRR952896
transfection time 7 hours | overexpressed gene PtrSND1-B1+sGFP
-0.2538
SRR952897
transfection time 7 hours | overexpressed gene PtrSND1-B1+sGFP
10 SRP271234 RNAseq of transfected protoplasts of Populus trichocarpa
loading
run
annotation
attributes
0.101
SRR12192585
transfected genes PtrHSFB3-1
0.1003
SRR12192584
transfected genes PtrHSFB3-1
0.0909
SRR12192582
transfected genes GFP
-0.0457
SRR12192594
transfected genes PtrMYB092
-0.0657
SRR12192592
transfected genes PtrMYB092
-0.0668
SRR12192593
transfected genes PtrMYB092
Loading
1 SRP071226 RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391)
loading
run
annotation
attributes
0.5132
SRR3207774
gene perturbation type knockdown of PAL2 | batch of trees NSF2
0.5047
SRR3207815
gene perturbation type knockdown of C3H3 | batch of trees NSF3
0.4934
SRR3207762
gene perturbation type knockdown of PAL5 | batch of trees NSF2
-0.4588
SRR3207712
gene perturbation type overexpression of CAD2 | batch of trees NSF1
-0.4602
SRR3207901
gene perturbation type knockdown of C4H2 | batch of trees NSF4
-0.4844
SRR3207716
gene perturbation type overexpression of CAD2 | batch of trees NSF1
2 ERP021848 High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
loading
run
annotation
attributes
0.5053
ERR1864490
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102930418 | INSDC last update 2017-03-01T23:45:22Z | Submitter Id E-MTAB-5540:Stem-xylem-short-term-salt-replicate-2 | organism part stem xylem | sample name E-MTAB-5540:Stem-xylem-short-term-salt-replicate-2
0.4853
ERR1864491
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102931168 | INSDC last update 2017-03-01T23:45:22Z | Submitter Id E-MTAB-5540:Stem-xylem-short-term-salt-replicate-3 | organism part stem xylem | sample name E-MTAB-5540:Stem-xylem-short-term-salt-replicate-3
0.4675
ERR1864465
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102911668 | INSDC last update 2017-03-01T23:45:21Z | Submitter Id E-MTAB-5540:Stem-xylem-control-untreated-replicate-1 | organism part stem xylem | sample name E-MTAB-5540:Stem-xylem-control-untreated-replicate-1
-0.4287
ERR1864452
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102901918 | INSDC last update 2017-03-01T23:45:21Z | Submitter Id E-MTAB-5540:Root-prolonged-salt-replicate-3 | organism part root | sample name E-MTAB-5540:Root-prolonged-salt-replicate-3
-0.4321
ERR1864450
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102900418 | INSDC last update 2017-03-01T23:45:21Z | Submitter Id E-MTAB-5540:Root-prolonged-salt-replicate-1 | organism part root | sample name E-MTAB-5540:Root-prolonged-salt-replicate-1
-0.4409
ERR1864451
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102901168 | INSDC last update 2017-03-01T23:45:21Z | Submitter Id E-MTAB-5540:Root-prolonged-salt-replicate-2 | organism part root | sample name E-MTAB-5540:Root-prolonged-salt-replicate-2
3 SRP074300 RNA-seq of major tissues and xylem cell types of Populus trichocarpa
loading
run
annotation
attributes
0.4839
SRR3473014
source_name Combination of xylem fiber, vessel and ray cells | tissue Xylem | cell type Combination of fiber, vessel and ray cells
0.4625
SRR3473012
source_name Combination of xylem fiber, vessel and ray cells | tissue Xylem | cell type Combination of fiber, vessel and ray cells
0.4251
SRR3473007
source_name Xylem fiber cells | tissue Xylem | cell type Fiber cell
-0.6104
SRR3472991
source_name Shoot tip | tissue Shoot tip
-0.6238
SRR3472993
source_name Shoot tip | tissue Shoot tip
-0.6268
SRR3472992
source_name Shoot tip | tissue Shoot tip
4 SRP072680 Populus trichocarpa Transcriptome or Gene expression
loading
run
annotation
attributes
0.4476
SRR3317206
isolate tree2 | tissue xylem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95631
0.3353
SRR3317480
isolate tree5 | tissue xylem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95637
0.2709
SRR3317208
isolate tree3 | tissue xylem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95633
-0.3301
SRR3317207
isolate tree3 | tissue phloem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95632
-0.3447
SRR3317473
isolate tree4 | tissue phloem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95634
-0.4046
SRR3317476
isolate tree5 | tissue phloem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95636
5 SRP103219 Differential gene expression analysis of drought responsive sense and antisense genes in Populus
loading
run
annotation
attributes
0.3821
SRR5423438
source_name drought treated_short-term_mature leaves | type drought treated | drought treatment short-term | tissue mature leaves | molecule subtype total RNA
0.3789
SRR5423440
source_name drought treated_short-term_mature leaves | type drought treated | drought treatment short-term | tissue mature leaves | molecule subtype total RNA
0.377
SRR5423437
source_name drought treated_short-term_mature leaves | type drought treated | drought treatment short-term | tissue mature leaves | molecule subtype total RNA
-0.5754
SRR5423456
source_name control_long-term_apex | type control | drought treatment long-term | tissue apex | molecule subtype mRNA
-0.5758
SRR5423457
source_name control_long-term_apex | type control | drought treatment long-term | tissue apex | molecule subtype mRNA
-0.5929
SRR5423461
source_name control_long-term_apex | type control | drought treatment long-term | tissue apex | molecule subtype mRNA
6 SRP201788 A genome assembly and the somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa [RNA-Seq]
loading
run
annotation
attributes
0.3237
SRR9668930
0.2863
SRR9668929
0.2571
SRR9668928
-0.2636
SRR9321774
-0.2699
SRR9321772
-0.3352
SRR9321773
7 SRP035471 Ptr-miR397a is a negative regulator of laccase genes affecting lignin content in Populus trichocarpa
loading
run
annotation
attributes
0.3197
SRR1121302
genotype wild type
0.1773
SRR1121294
genotype over expression miR397a
0.1331
SRR1121299
genotype over expression miR397a
-0.1204
SRR1121303
genotype wild type
-0.1423
SRR1121300
genotype over expression miR397a
-0.2745
SRR1121298
genotype over expression miR397a
8 SRP072040 RNAseq of drought treated Populus trichocarpa
loading
run
annotation
attributes
0.3081
SRR3241528
days after drought treatment 0 day
0.2968
SRR3241529
days after drought treatment 0 day
0.2642
SRR3241530
days after drought treatment 0 day
-0.2083
SRR3241535
days after drought treatment 7 day
-0.232
SRR3241538
days after drought treatment 7 day
-0.268
SRR3241534
days after drought treatment 5 day
9 SRP028843 SND1 Transcription Factor-Directed Quantitative Functional Hierarchical Genetic Regulatory Network in Wood Formation in Populus trichocarpa
loading
run
annotation
attributes
0.1807
SRR952897
transfection time 7 hours | overexpressed gene PtrSND1-B1+sGFP
0.1456
SRR952888
transfection time 7 hours | overexpressed gene sGFP (control)
0.107
SRR952892
transfection time 25 hours | overexpressed gene sGFP (control)
-0.1108
SRR952899
transfection time 12 hours | overexpressed gene PtrSND1-B1+sGFP
-0.12
SRR952902
transfection time 25 hours | overexpressed gene PtrSND1-B1+sGFP
-0.1748
SRR952903
transfection time 25 hours | overexpressed gene PtrSND1-B1+sGFP
10 SRP271234 RNAseq of transfected protoplasts of Populus trichocarpa
loading
run
annotation
attributes
0.1496
SRR12192592
transfected genes PtrMYB092
0.1483
SRR12192593
transfected genes PtrMYB092
0.0995
SRR12192580
transfected genes GFP
-0.0987
SRR12192583
transfected genes GFP
-0.1322
SRR12192584
transfected genes PtrHSFB3-1
-0.1349
SRR12192585
transfected genes PtrHSFB3-1
Loading
1 SRP103219 Differential gene expression analysis of drought responsive sense and antisense genes in Populus
loading
run
annotation
attributes
0.7713
SRR5423376
source_name drought treated_short-term_apex | drought treatment short-term | tissue apex | molecule subtype total RNA
0.7699
SRR5423378
source_name drought treated_short-term_apex | drought treatment short-term | tissue apex | molecule subtype total RNA
0.769
SRR5423370
source_name drought treated_short-term_apex | drought treatment short-term | tissue apex | molecule subtype total RNA
-0.6039
SRR5423512
source_name drought treated_long-term_young leaves | drought treatment long-term | tissue young leaves | molecule subtype mRNA
-0.606
SRR5423517
source_name drought treated_long-term_young leaves | drought treatment long-term | tissue young leaves | molecule subtype mRNA
-0.6089
SRR5423511
source_name drought treated_long-term_young leaves | drought treatment long-term | tissue young leaves | molecule subtype mRNA
2 ERP021848 High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
loading
run
annotation
attributes
0.3667
ERR1864476
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102919918 | INSDC last update 2017-03-01T23:45:21Z | Submitter Id E-MTAB-5540:Stem-xylem-prolonged-heat-replicate-3 | organism part stem xylem | sample name E-MTAB-5540:Stem-xylem-prolonged-heat-replicate-3
0.3435
ERR1864475
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102919168 | INSDC last update 2017-03-01T23:45:21Z | Submitter Id E-MTAB-5540:Stem-xylem-prolonged-heat-replicate-2 | organism part stem xylem | sample name E-MTAB-5540:Stem-xylem-prolonged-heat-replicate-2
0.2963
ERR1864474
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102918418 | INSDC last update 2017-03-01T23:45:21Z | Submitter Id E-MTAB-5540:Stem-xylem-prolonged-heat-replicate-1 | organism part stem xylem | sample name E-MTAB-5540:Stem-xylem-prolonged-heat-replicate-1
-0.2394
ERR1864426
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102882418 | INSDC last update 2017-03-01T23:45:20Z | Submitter Id E-MTAB-5540:Leaf-short-term-cold-replicate-1 | organism part vascular leaf | sample name E-MTAB-5540:Leaf-short-term-cold-replicate-1
-0.247
ERR1864428
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102883918 | INSDC last update 2017-03-01T23:45:20Z | Submitter Id E-MTAB-5540:Leaf-short-term-cold-replicate-3 | organism part vascular leaf | sample name E-MTAB-5540:Leaf-short-term-cold-replicate-3
-0.2487
ERR1864414
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102873418 | INSDC last update 2017-03-01T23:45:19Z | Submitter Id E-MTAB-5540:Leaf-prolonged-cold-replicate-1 | organism part vascular leaf | sample name E-MTAB-5540:Leaf-prolonged-cold-replicate-1
3 SRP201788 A genome assembly and the somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa [RNA-Seq]
loading
run
annotation
attributes
0.2533
SRR9668903
0.1903
SRR9321772
0.1663
SRR9321779
-0.2126
SRR9668897
-0.2233
SRR9668924
-0.225
SRR9321778
4 SRP072040 RNAseq of drought treated Populus trichocarpa
loading
run
annotation
attributes
0.1911
SRR3241537
days after drought treatment 7 day
0.1468
SRR3241536
days after drought treatment 7 day
0.0857
SRR3241535
days after drought treatment 7 day
-0.0591
SRR3241527
days after drought treatment 0 day
-0.11
SRR3241528
days after drought treatment 0 day
-0.1259
SRR3241529
days after drought treatment 0 day
5 SRP071226 RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391)
loading
run
annotation
attributes
0.1879
SRR3208020
gene perturbation type knockdown of 4CL3,4CL5 | batch of trees NSF6
0.1709
SRR3207749
gene perturbation type knockdown of MYB167 | batch of trees NSF2
0.1477
SRR3208011
gene perturbation type knockdown of 4CL5 | batch of trees NSF6
-0.1678
SRR3207919
gene perturbation type wild type control | batch of trees NSF4
-0.177
SRR3207905
gene perturbation type knockdown of C4H2 | batch of trees NSF4
-0.1963
SRR3207903
gene perturbation type knockdown of C4H2 | batch of trees NSF4
6 SRP028843 SND1 Transcription Factor-Directed Quantitative Functional Hierarchical Genetic Regulatory Network in Wood Formation in Populus trichocarpa
loading
run
annotation
attributes
0.1567
SRR952892
transfection time 25 hours | overexpressed gene sGFP (control)
0.0997
SRR952890
transfection time 12 hours | overexpressed gene sGFP (control)
0.0534
SRR952893
transfection time 25 hours | overexpressed gene sGFP (control)
-0.0542
SRR952886
transfection time 7 hours | overexpressed gene sGFP (control)
-0.0792
SRR952895
transfection time 7 hours | overexpressed gene PtrSND1-B1+sGFP
-0.088
SRR952903
transfection time 25 hours | overexpressed gene PtrSND1-B1+sGFP
7 SRP072680 Populus trichocarpa Transcriptome or Gene expression
loading
run
annotation
attributes
0.1376
SRR3317483
isolate tree6 | tissue xylem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95639
0.1074
SRR3317482
isolate tree6 | tissue phloem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95638
0.0526
SRR3317189
isolate tree1 | tissue xylem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95629
-0.035
SRR3317201
isolate tree2 | tissue phloem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95630
-0.0869
SRR3317476
isolate tree5 | tissue phloem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95636
-0.1055
SRR3317181
isolate tree1 | tissue phloem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95628
8 SRP074300 RNA-seq of major tissues and xylem cell types of Populus trichocarpa
loading
run
annotation
attributes
0.1353
SRR3473014
source_name Combination of xylem fiber, vessel and ray cells | tissue Xylem | cell type Combination of fiber, vessel and ray cells
0.1334
SRR3473012
source_name Combination of xylem fiber, vessel and ray cells | tissue Xylem | cell type Combination of fiber, vessel and ray cells
0.1117
SRR3473013
source_name Combination of xylem fiber, vessel and ray cells | tissue Xylem | cell type Combination of fiber, vessel and ray cells
-0.148
SRR3472995
source_name Leaf | tissue Leaf
-0.169
SRR3472996
source_name Leaf | tissue Leaf
-0.2215
SRR3472994
source_name Leaf | tissue Leaf
9 SRP035471 Ptr-miR397a is a negative regulator of laccase genes affecting lignin content in Populus trichocarpa
loading
run
annotation
attributes
0.1223
SRR1121301
genotype wild type
0.0948
SRR1121302
genotype wild type
0.0647
SRR1121294
genotype over expression miR397a
-0.0563
SRR1121298
genotype over expression miR397a
-0.0657
SRR1121295
genotype over expression miR397a
-0.0963
SRR1121292
genotype over expression miR397a
10 SRP271234 RNAseq of transfected protoplasts of Populus trichocarpa
loading
run
annotation
attributes
0.1101
SRR12192580
transfected genes GFP
0.1027
SRR12192581
transfected genes GFP
0.0747
SRR12192579
transfected genes GFP
-0.0748
SRR12192584
transfected genes PtrHSFB3-1
-0.0812
SRR12192594
transfected genes PtrMYB092
-0.0869
SRR12192595
transfected genes PtrMYB092
Loading
1 SRP071226 RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391)
loading
run
annotation
attributes
0.4197
SRR3207696
gene perturbation type knockdown of PAL3 | batch of trees NSF1
0.4191
SRR3207900
gene perturbation type knockdown of C4H2 | batch of trees NSF4
0.4182
SRR3207874
gene perturbation type knockdown of C4H1 | batch of trees NSF4
-0.3349
SRR3208037
gene perturbation type knockdown of CCoAOMT1,CCoAOMT2 | batch of trees NSF6
-0.3627
SRR3208015
gene perturbation type knockdown of 4CL5 | batch of trees NSF6
-0.3924
SRR3208044
gene perturbation type knockdown of AldOMT2 | batch of trees NSF6
2 SRP103219 Differential gene expression analysis of drought responsive sense and antisense genes in Populus
loading
run
annotation
attributes
0.4599
SRR5423409
source_name control_short-term_mature leaves | type control | drought treatment short-term | tissue mature leaves | molecule subtype total RNA
0.4599
SRR5423414
source_name control_short-term_mature leaves | type control | drought treatment short-term | tissue mature leaves | molecule subtype total RNA
0.4596
SRR5423402
source_name control_short-term_mature leaves | type control | drought treatment short-term | tissue mature leaves | molecule subtype total RNA
-0.3261
SRR5423484
source_name drought treated_long-term_apex | type drought treated | drought treatment long-term | tissue apex | molecule subtype mRNA
-0.3276
SRR5423480
source_name drought treated_long-term_apex | type drought treated | drought treatment long-term | tissue apex | molecule subtype mRNA
-0.3282
SRR5423483
source_name drought treated_long-term_apex | type drought treated | drought treatment long-term | tissue apex | molecule subtype mRNA
3 SRP072040 RNAseq of drought treated Populus trichocarpa
loading
run
annotation
attributes
0.2211
SRR3241527
days after drought treatment 0 day
0.1319
SRR3241528
days after drought treatment 0 day
0.1173
SRR3241533
days after drought treatment 5 day
-0.1945
SRR3241537
days after drought treatment 7 day
-0.236
SRR3241535
days after drought treatment 7 day
-0.3011
SRR3241536
days after drought treatment 7 day
4 SRP072680 Populus trichocarpa Transcriptome or Gene expression
loading
run
annotation
attributes
0.2546
SRR3317474
isolate tree4 | tissue xylem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95635
0.1012
SRR3317473
isolate tree4 | tissue phloem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95634
0.1001
SRR3317476
isolate tree5 | tissue phloem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95636
-0.057
SRR3317189
isolate tree1 | tissue xylem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95629
-0.1795
SRR3317480
isolate tree5 | tissue xylem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95637
-0.2963
SRR3317483
isolate tree6 | tissue xylem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95639
5 SRP028843 SND1 Transcription Factor-Directed Quantitative Functional Hierarchical Genetic Regulatory Network in Wood Formation in Populus trichocarpa
loading
run
annotation
attributes
0.1562
SRR952888
transfection time 7 hours | overexpressed gene sGFP (control)
0.1178
SRR952897
transfection time 7 hours | overexpressed gene PtrSND1-B1+sGFP
0.1153
SRR952886
transfection time 7 hours | overexpressed gene sGFP (control)
-0.1298
SRR952901
transfection time 25 hours | overexpressed gene PtrSND1-B1+sGFP
-0.167
SRR952893
transfection time 25 hours | overexpressed gene sGFP (control)
-0.2846
SRR952892
transfection time 25 hours | overexpressed gene sGFP (control)
6 SRP201788 A genome assembly and the somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa [RNA-Seq]
loading
run
annotation
attributes
0.254
SRR9668919
0.2475
SRR9668908
0.221
SRR9668928
-0.1908
SRR9668902
-0.2101
SRR9668927
-0.2151
SRR9321778
7 ERP021848 High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
loading
run
annotation
attributes
0.2757
ERR1864463
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102910168 | INSDC last update 2017-03-01T23:45:21Z | Submitter Id E-MTAB-5540:Root-short-term-salt-replicate-2 | organism part root | sample name E-MTAB-5540:Root-short-term-salt-replicate-2
0.2719
ERR1864464
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102910918 | INSDC last update 2017-03-01T23:45:21Z | Submitter Id E-MTAB-5540:Root-short-term-salt-replicate-3 | organism part root | sample name E-MTAB-5540:Root-short-term-salt-replicate-3
0.2555
ERR1864462
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102909418 | INSDC last update 2017-03-01T23:45:21Z | Submitter Id E-MTAB-5540:Root-short-term-salt-replicate-1 | organism part root | sample name E-MTAB-5540:Root-short-term-salt-replicate-1
-0.1758
ERR1864486
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102927418 | INSDC last update 2017-03-01T23:45:22Z | Submitter Id E-MTAB-5540:Stem-xylem-short-term-heat-replicate-1 | organism part stem xylem | sample name E-MTAB-5540:Stem-xylem-short-term-heat-replicate-1
-0.1761
ERR1864419
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102877168 | INSDC last update 2017-03-01T23:45:19Z | Submitter Id E-MTAB-5540:Leaf-prolonged-drought-replicate-3 | organism part vascular leaf | sample name E-MTAB-5540:Leaf-prolonged-drought-replicate-3
-0.2039
ERR1864471
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102916168 | INSDC last update 2017-03-01T23:45:21Z | Submitter Id E-MTAB-5540:Stem-xylem-prolonged-drought-replicate-1 | organism part stem xylem | sample name E-MTAB-5540:Stem-xylem-prolonged-drought-replicate-1
8 SRP035471 Ptr-miR397a is a negative regulator of laccase genes affecting lignin content in Populus trichocarpa
loading
run
annotation
attributes
0.192
SRR1121292
genotype over expression miR397a
0.1312
SRR1121295
genotype over expression miR397a
0.0472
SRR1121303
genotype wild type
-0.096
SRR1121294
genotype over expression miR397a
-0.0998
SRR1121293
genotype over expression miR397a
-0.1583
SRR1121302
genotype wild type
9 SRP074300 RNA-seq of major tissues and xylem cell types of Populus trichocarpa
loading
run
annotation
attributes
0.2449
SRR3472999
source_name Phloem | tissue Phloem
0.2144
SRR3473000
source_name Primary root | tissue Primary root
0.2064
SRR3473002
source_name Primary root | tissue Primary root
-0.1406
SRR3473007
source_name Xylem fiber cells | tissue Xylem | cell type Fiber cell
-0.1509
SRR3473014
source_name Combination of xylem fiber, vessel and ray cells | tissue Xylem | cell type Combination of fiber, vessel and ray cells
-0.1563
SRR3473012
source_name Combination of xylem fiber, vessel and ray cells | tissue Xylem | cell type Combination of fiber, vessel and ray cells
10 SRP271234 RNAseq of transfected protoplasts of Populus trichocarpa
loading
run
annotation
attributes
0.1528
SRR12192585
transfected genes PtrHSFB3-1
0.1523
SRR12192584
transfected genes PtrHSFB3-1
0.1036
SRR12192589
transfected genes PtrHSFB3-1
-0.0914
SRR12192592
transfected genes PtrMYB092
-0.1358
SRR12192581
transfected genes GFP
-0.1498
SRR12192580
transfected genes GFP
Loading
1 SRP071226 RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391)
loading
run
annotation
attributes
0.353
SRR3207743
gene perturbation type knockdown of PAL5 | batch of trees NSF2
0.3315
SRR3208038
gene perturbation type knockdown of CCoAOMT1,CCoAOMT2 | batch of trees NSF6
0.3233
SRR3208036
gene perturbation type knockdown of CCoAOMT1,CCoAOMT2 | batch of trees NSF6
-0.4359
SRR3207720
gene perturbation type wild type control | batch of trees NSF1
-0.4651
SRR3207713
gene perturbation type overexpression of CAD2 | batch of trees NSF1
-0.4684
SRR3207898
gene perturbation type knockdown of MYB156 | batch of trees NSF4
2 ERP021848 High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
loading
run
annotation
attributes
0.3262
ERR1864443
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102895168 | INSDC last update 2017-03-01T23:45:20Z | Submitter Id E-MTAB-5540:Root-prolonged-cold-replicate-3 | organism part root | sample name E-MTAB-5540:Root-prolonged-cold-replicate-3
0.3125
ERR1864442
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102894418 | INSDC last update 2017-03-01T23:45:20Z | Submitter Id E-MTAB-5540:Root-prolonged-cold-replicate-2 | organism part root | sample name E-MTAB-5540:Root-prolonged-cold-replicate-2
0.304
ERR1864441
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102893668 | INSDC last update 2017-03-01T23:45:20Z | Submitter Id E-MTAB-5540:Root-prolonged-cold-replicate-1 | organism part root | sample name E-MTAB-5540:Root-prolonged-cold-replicate-1
-0.4205
ERR1864474
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102918418 | INSDC last update 2017-03-01T23:45:21Z | Submitter Id E-MTAB-5540:Stem-xylem-prolonged-heat-replicate-1 | organism part stem xylem | sample name E-MTAB-5540:Stem-xylem-prolonged-heat-replicate-1
-0.4225
ERR1864476
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102919918 | INSDC last update 2017-03-01T23:45:21Z | Submitter Id E-MTAB-5540:Stem-xylem-prolonged-heat-replicate-3 | organism part stem xylem | sample name E-MTAB-5540:Stem-xylem-prolonged-heat-replicate-3
-0.4498
ERR1864475
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102919168 | INSDC last update 2017-03-01T23:45:21Z | Submitter Id E-MTAB-5540:Stem-xylem-prolonged-heat-replicate-2 | organism part stem xylem | sample name E-MTAB-5540:Stem-xylem-prolonged-heat-replicate-2
3 SRP074300 RNA-seq of major tissues and xylem cell types of Populus trichocarpa
loading
run
annotation
attributes
0.3247
SRR3473002
source_name Primary root | tissue Primary root
0.2978
SRR3473000
source_name Primary root | tissue Primary root
0.2875
SRR3473001
source_name Primary root | tissue Primary root
-0.3155
SRR3473013
source_name Combination of xylem fiber, vessel and ray cells | tissue Xylem | cell type Combination of fiber, vessel and ray cells
-0.3338
SRR3473014
source_name Combination of xylem fiber, vessel and ray cells | tissue Xylem | cell type Combination of fiber, vessel and ray cells
-0.3577
SRR3473012
source_name Combination of xylem fiber, vessel and ray cells | tissue Xylem | cell type Combination of fiber, vessel and ray cells
4 SRP072040 RNAseq of drought treated Populus trichocarpa
loading
run
annotation
attributes
0.2174
SRR3241533
days after drought treatment 5 day
0.0984
SRR3241535
days after drought treatment 7 day
0.0853
SRR3241531
days after drought treatment 5 day
-0.127
SRR3241530
days after drought treatment 0 day
-0.2025
SRR3241529
days after drought treatment 0 day
-0.2173
SRR3241527
days after drought treatment 0 day
5 SRP103219 Differential gene expression analysis of drought responsive sense and antisense genes in Populus
loading
run
annotation
attributes
0.2093
SRR5423596
source_name drought treated_long-term_root | type drought treated | tissue root | molecule subtype total RNA
0.2089
SRR5423595
source_name drought treated_long-term_root | type drought treated | tissue root | molecule subtype total RNA
0.1849
SRR5423594
source_name control_long-term_root | type control | tissue root | molecule subtype total RNA
-0.1444
SRR5423460
source_name control_long-term_apex | type control | tissue apex | molecule subtype mRNA
-0.1487
SRR5423470
source_name control_long-term_apex | type control | tissue apex | molecule subtype mRNA
-0.1801
SRR5423461
source_name control_long-term_apex | type control | tissue apex | molecule subtype mRNA
6 SRP028843 SND1 Transcription Factor-Directed Quantitative Functional Hierarchical Genetic Regulatory Network in Wood Formation in Populus trichocarpa
loading
run
annotation
attributes
0.2061
SRR952892
transfection time 25 hours | overexpressed gene sGFP (control)
0.1829
SRR952894
transfection time 25 hours | overexpressed gene sGFP (control)
0.1385
SRR952889
transfection time 12 hours | overexpressed gene sGFP (control)
-0.1027
SRR952896
transfection time 7 hours | overexpressed gene PtrSND1-B1+sGFP
-0.1138
SRR952886
transfection time 7 hours | overexpressed gene sGFP (control)
-0.1278
SRR952887
transfection time 7 hours | overexpressed gene sGFP (control)
7 SRP072680 Populus trichocarpa Transcriptome or Gene expression
loading
run
annotation
attributes
0.1923
SRR3317483
isolate tree6 | tissue xylem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95639
0.1372
SRR3317482
isolate tree6 | tissue phloem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95638
0.0989
SRR3317181
isolate tree1 | tissue phloem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95628
-0.0827
SRR3317473
isolate tree4 | tissue phloem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95634
-0.1148
SRR3317208
isolate tree3 | tissue xylem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95633
-0.1573
SRR3317474
isolate tree4 | tissue xylem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95635
8 SRP271234 RNAseq of transfected protoplasts of Populus trichocarpa
loading
run
annotation
attributes
0.1818
SRR12192578
transfected genes GFP
0.1767
SRR12192579
transfected genes GFP
0.1168
SRR12192591
transfected genes PtrMYB092
-0.0712
SRR12192582
transfected genes GFP
-0.1369
SRR12192594
transfected genes PtrMYB092
-0.1482
SRR12192595
transfected genes PtrMYB092
9 SRP201788 A genome assembly and the somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa [RNA-Seq]
loading
run
annotation
attributes
0.1602
SRR9668917
0.1241
SRR9668920
0.1237
SRR9668927
-0.1231
SRR9668903
-0.1313
SRR9668895
-0.1783
SRR9668900
10 SRP035471 Ptr-miR397a is a negative regulator of laccase genes affecting lignin content in Populus trichocarpa
loading
run
annotation
attributes
0.1153
SRR1121296
genotype over expression miR397a
0.0968
SRR1121293
genotype over expression miR397a
0.0844
SRR1121300
genotype over expression miR397a
-0.0606
SRR1121294
genotype over expression miR397a
-0.0738
SRR1121301
genotype wild type
-0.1603
SRR1121297
genotype over expression miR397a
Loading
1 SRP072040 RNAseq of drought treated Populus trichocarpa
loading
run
annotation
attributes
0.4612
SRR3241533
days after drought treatment 5 day
0.4383
SRR3241534
days after drought treatment 5 day
0.341
SRR3241531
days after drought treatment 5 day
-0.2443
SRR3241536
days after drought treatment 7 day
-0.3335
SRR3241530
days after drought treatment 0 day
-0.459
SRR3241527
days after drought treatment 0 day
2 SRP071226 RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391)
loading
run
annotation
attributes
0.4116
SRR3207716
gene perturbation type overexpression of CAD2 | batch of trees NSF1
0.3511
SRR3207830
gene perturbation type knockdown of CAD1 | batch of trees NSF3
0.3485
SRR3207714
gene perturbation type overexpression of CAD2 | batch of trees NSF1
-0.3713
SRR3207983
gene perturbation type knockdown of KNOX1 | batch of trees NSF5
-0.3865
SRR3207991
gene perturbation type knockdown of MYB003,MYB020 | batch of trees NSF5
-0.3954
SRR3207993
gene perturbation type knockdown of MYB003,MYB020 | batch of trees NSF5
3 SRP072680 Populus trichocarpa Transcriptome or Gene expression
loading
run
annotation
attributes
0.3145
SRR3317189
isolate tree1 | tissue xylem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95629
0.1887
SRR3317208
isolate tree3 | tissue xylem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95633
0.1518
SRR3317480
isolate tree5 | tissue xylem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95637
-0.1632
SRR3317207
isolate tree3 | tissue phloem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95632
-0.1992
SRR3317474
isolate tree4 | tissue xylem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95635
-0.1997
SRR3317201
isolate tree2 | tissue phloem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95630
4 ERP021848 High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
loading
run
annotation
attributes
0.2963
ERR1864472
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102916918 | INSDC last update 2017-03-01T23:45:21Z | Submitter Id E-MTAB-5540:Stem-xylem-prolonged-drought-replicate-2 | organism part stem xylem | sample name E-MTAB-5540:Stem-xylem-prolonged-drought-replicate-2
0.2957
ERR1864424
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102880918 | INSDC last update 2017-03-01T23:45:20Z | Submitter Id E-MTAB-5540:Leaf-prolonged-salt-replicate-2 | organism part vascular leaf | sample name E-MTAB-5540:Leaf-prolonged-salt-replicate-2
0.2807
ERR1864425
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102881668 | INSDC last update 2017-03-01T23:45:20Z | Submitter Id E-MTAB-5540:Leaf-prolonged-salt-replicate-3 | organism part vascular leaf | sample name E-MTAB-5540:Leaf-prolonged-salt-replicate-3
-0.3111
ERR1864480
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102922918 | INSDC last update 2017-03-01T23:45:22Z | Submitter Id E-MTAB-5540:Stem-xylem-short-term-cold-replicate-1 | organism part stem xylem | sample name E-MTAB-5540:Stem-xylem-short-term-cold-replicate-1
-0.3449
ERR1864479
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102922168 | INSDC last update 2017-03-01T23:45:21Z | Submitter Id E-MTAB-5540:Stem-xylem-prolonged-salt-replicate-3 | organism part stem xylem | sample name E-MTAB-5540:Stem-xylem-prolonged-salt-replicate-3
-0.3869
ERR1864481
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102923668 | INSDC last update 2017-03-01T23:45:22Z | Submitter Id E-MTAB-5540:Stem-xylem-short-term-cold-replicate-2 | organism part stem xylem | sample name E-MTAB-5540:Stem-xylem-short-term-cold-replicate-2
5 SRP271234 RNAseq of transfected protoplasts of Populus trichocarpa
loading
run
annotation
attributes
0.2945
SRR12192579
transfected genes GFP
0.2928
SRR12192578
transfected genes GFP
0.117
SRR12192582
transfected genes GFP
-0.1652
SRR12192595
transfected genes PtrMYB092
-0.167
SRR12192588
transfected genes PtrHSFB3-1
-0.1697
SRR12192594
transfected genes PtrMYB092
6 SRP074300 RNA-seq of major tissues and xylem cell types of Populus trichocarpa
loading
run
annotation
attributes
0.2867
SRR3473013
source_name Combination of xylem fiber, vessel and ray cells | tissue Xylem | cell type Combination of fiber, vessel and ray cells
0.2033
SRR3473010
source_name Xylem vessel cells | tissue Xylem | cell type Vessel cell
0.1314
SRR3473011
source_name Xylem vessel cells | tissue Xylem | cell type Vessel cell
-0.1587
SRR3472997
source_name Phloem | tissue Phloem
-0.1988
SRR3472999
source_name Phloem | tissue Phloem
-0.2582
SRR3472998
source_name Phloem | tissue Phloem
7 SRP201788 A genome assembly and the somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa [RNA-Seq]
loading
run
annotation
attributes
0.2546
SRR9321773
0.2166
SRR9321772
0.2027
SRR9668902
-0.2515
SRR9668930
-0.2605
SRR9668928
-0.2664
SRR9668922
8 SRP028843 SND1 Transcription Factor-Directed Quantitative Functional Hierarchical Genetic Regulatory Network in Wood Formation in Populus trichocarpa
loading
run
annotation
attributes
0.2278
SRR952889
transfection time 12 hours | overexpressed gene sGFP (control)
0.2186
SRR952894
transfection time 25 hours | overexpressed gene sGFP (control)
0.1398
SRR952898
transfection time 12 hours | overexpressed gene PtrSND1-B1+sGFP
-0.08
SRR952886
transfection time 7 hours | overexpressed gene sGFP (control)
-0.1423
SRR952902
transfection time 25 hours | overexpressed gene PtrSND1-B1+sGFP
-0.1696
SRR952893
transfection time 25 hours | overexpressed gene sGFP (control)
9 SRP035471 Ptr-miR397a is a negative regulator of laccase genes affecting lignin content in Populus trichocarpa
loading
run
annotation
attributes
0.193
SRR1121296
genotype over expression miR397a
0.1686
SRR1121302
genotype wild type
0.1477
SRR1121301
genotype wild type
-0.1251
SRR1121298
genotype over expression miR397a
-0.2799
SRR1121294
genotype over expression miR397a
-0.3229
SRR1121297
genotype over expression miR397a
10 SRP103219 Differential gene expression analysis of drought responsive sense and antisense genes in Populus
loading
run
annotation
attributes
0.169
SRR5423446
source_name drought treated_short-term_mature leaves | type drought treated | drought treatment short-term | tissue mature leaves | molecule subtype total RNA
0.1649
SRR5423447
source_name drought treated_short-term_mature leaves | type drought treated | drought treatment short-term | tissue mature leaves | molecule subtype total RNA
0.1643
SRR5423439
source_name drought treated_short-term_mature leaves | type drought treated | drought treatment short-term | tissue mature leaves | molecule subtype total RNA
-0.1671
SRR5423500
source_name control_long-term_young leaves | type control | drought treatment long-term | tissue young leaves | molecule subtype mRNA
-0.1672
SRR5423501
source_name control_long-term_young leaves | type control | drought treatment long-term | tissue young leaves | molecule subtype mRNA
-0.1681
SRR5423503
source_name control_long-term_young leaves | type control | drought treatment long-term | tissue young leaves | molecule subtype mRNA
Loading
1 SRP074300 RNA-seq of major tissues and xylem cell types of Populus trichocarpa
loading
run
annotation
attributes
0.2147
SRR3473003
source_name Stem differentiating xylem | tissue Stem differentiating xylem
0.1395
SRR3472994
source_name Leaf | tissue Leaf
0.1237
SRR3473002
source_name Primary root | tissue Primary root
-0.3573
SRR3472997
source_name Phloem | tissue Phloem
-0.3683
SRR3472999
source_name Phloem | tissue Phloem
-0.4097
SRR3472998
source_name Phloem | tissue Phloem
2 ERP021848 High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
loading
run
annotation
attributes
0.3969
ERR1864472
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102916918 | INSDC last update 2017-03-01T23:45:21Z | Submitter Id E-MTAB-5540:Stem-xylem-prolonged-drought-replicate-2 | organism part stem xylem | sample name E-MTAB-5540:Stem-xylem-prolonged-drought-replicate-2
0.3614
ERR1864473
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102917668 | INSDC last update 2017-03-01T23:45:21Z | Submitter Id E-MTAB-5540:Stem-xylem-prolonged-drought-replicate-3 | organism part stem xylem | sample name E-MTAB-5540:Stem-xylem-prolonged-drought-replicate-3
0.3286
ERR1864471
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102916168 | INSDC last update 2017-03-01T23:45:21Z | Submitter Id E-MTAB-5540:Stem-xylem-prolonged-drought-replicate-1 | organism part stem xylem | sample name E-MTAB-5540:Stem-xylem-prolonged-drought-replicate-1
-0.3431
ERR1864475
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102919168 | INSDC last update 2017-03-01T23:45:21Z | Submitter Id E-MTAB-5540:Stem-xylem-prolonged-heat-replicate-2 | organism part stem xylem | sample name E-MTAB-5540:Stem-xylem-prolonged-heat-replicate-2
-0.3513
ERR1864420
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102877918 | INSDC last update 2017-03-01T23:45:20Z | Submitter Id E-MTAB-5540:Leaf-prolonged-heat-replicate-1 | organism part vascular leaf | sample name E-MTAB-5540:Leaf-prolonged-heat-replicate-1
-0.3992
ERR1864422
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102879418 | INSDC last update 2017-03-01T23:45:20Z | Submitter Id E-MTAB-5540:Leaf-prolonged-heat-replicate-3 | organism part vascular leaf | sample name E-MTAB-5540:Leaf-prolonged-heat-replicate-3
3 SRP072680 Populus trichocarpa Transcriptome or Gene expression
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annotation
attributes
0.3973
SRR3317206
isolate tree2 | tissue xylem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95631
0.3612
SRR3317189
isolate tree1 | tissue xylem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95629
0.2864
SRR3317474
isolate tree4 | tissue xylem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95635
-0.3323
SRR3317473
isolate tree4 | tissue phloem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95634
-0.3391
SRR3317201
isolate tree2 | tissue phloem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95630
-0.393
SRR3317207
isolate tree3 | tissue phloem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95632
4 SRP072040 RNAseq of drought treated Populus trichocarpa
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annotation
attributes
0.3601
SRR3241533
days after drought treatment 5 day
0.2671
SRR3241532
days after drought treatment 5 day
0.2629
SRR3241531
days after drought treatment 5 day
-0.2321
SRR3241529
days after drought treatment 0 day
-0.3281
SRR3241527
days after drought treatment 0 day
-0.3473
SRR3241530
days after drought treatment 0 day
5 SRP071226 RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391)
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annotation
attributes
0.334
SRR3207899
gene perturbation type knockdown of MYB156 | batch of trees NSF4
0.2937
SRR3207736
gene perturbation type knockdown of LIM2 | batch of trees NSF2
0.2862
SRR3207882
gene perturbation type knockdown of C4H1 | batch of trees NSF4
-0.2691
SRR3208022
gene perturbation type knockdown of CCoAOMT3 | batch of trees NSF6
-0.3043
SRR3208048
gene perturbation type knockdown of AldOMT2 | batch of trees NSF6
-0.3223
SRR3208023
gene perturbation type knockdown of CCoAOMT3 | batch of trees NSF6
6 SRP201788 A genome assembly and the somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa [RNA-Seq]
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annotation
attributes
0.252
SRR9668924
0.207
SRR9668929
0.1844
SRR9668909
-0.1817
SRR9668900
-0.2251
SRR9321777
-0.2709
SRR9668903
7 SRP028843 SND1 Transcription Factor-Directed Quantitative Functional Hierarchical Genetic Regulatory Network in Wood Formation in Populus trichocarpa
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annotation
attributes
0.1944
SRR952889
transfection time 12 hours | overexpressed gene sGFP (control)
0.1692
SRR952898
transfection time 12 hours | overexpressed gene PtrSND1-B1+sGFP
0.1316
SRR952895
transfection time 7 hours | overexpressed gene PtrSND1-B1+sGFP
-0.1195
SRR952900
transfection time 12 hours | overexpressed gene PtrSND1-B1+sGFP
-0.1426
SRR952899
transfection time 12 hours | overexpressed gene PtrSND1-B1+sGFP
-0.1981
SRR952893
transfection time 25 hours | overexpressed gene sGFP (control)
8 SRP103219 Differential gene expression analysis of drought responsive sense and antisense genes in Populus
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annotation
attributes
0.2737
SRR5423519
source_name control_long-term_mature leaves | type control | drought treatment long-term | molecule subtype mRNA
0.2735
SRR5423523
source_name control_long-term_mature leaves | type control | drought treatment long-term | molecule subtype mRNA
0.2734
SRR5423520
source_name control_long-term_mature leaves | type control | drought treatment long-term | molecule subtype mRNA
-0.1686
SRR5423426
source_name drought treated_short-term_mature leaves | type drought treated | drought treatment short-term | molecule subtype total RNA
-0.1698
SRR5423424
source_name drought treated_short-term_mature leaves | type drought treated | drought treatment short-term | molecule subtype total RNA
-0.1701
SRR5423430
source_name drought treated_short-term_mature leaves | type drought treated | drought treatment short-term | molecule subtype total RNA
9 SRP271234 RNAseq of transfected protoplasts of Populus trichocarpa
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annotation
attributes
0.2174
SRR12192584
transfected genes PtrHSFB3-1
0.2158
SRR12192585
transfected genes PtrHSFB3-1
0.0736
SRR12192590
transfected genes PtrMYB092
-0.0721
SRR12192582
transfected genes GFP
-0.1366
SRR12192580
transfected genes GFP
-0.14
SRR12192581
transfected genes GFP
10 SRP035471 Ptr-miR397a is a negative regulator of laccase genes affecting lignin content in Populus trichocarpa
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annotation
attributes
0.1334
SRR1121298
genotype over expression miR397a
0.0731
SRR1121297
genotype over expression miR397a
0.0537
SRR1121296
genotype over expression miR397a
-0.1126
SRR1121293
genotype over expression miR397a
-0.1158
SRR1121303
genotype wild type
-0.1247
SRR1121302
genotype wild type
Loading
1 SRP071226 RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391)
loading
run
annotation
attributes
0.3635
SRR3208053
gene perturbation type knockdown of MYB002,MYB021 | batch of trees NSF6
0.3585
SRR3208003
gene perturbation type knockdown of 4CL3 | batch of trees NSF6
0.3534
SRR3208005
gene perturbation type knockdown of 4CL3 | batch of trees NSF6
-0.3543
SRR3207764
gene perturbation type knockdown of MYB221 | batch of trees NSF2
-0.3624
SRR3207756
gene perturbation type knockdown of MYB090 | batch of trees NSF2
-0.4832
SRR3207763
gene perturbation type knockdown of MYB221 | batch of trees NSF2
2 ERP021848 High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
loading
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annotation
attributes
0.3145
ERR1864445
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102896668 | INSDC last update 2017-03-01T23:45:20Z | Submitter Id E-MTAB-5540:Root-prolonged-drought-replicate-2 | organism part root | sample name E-MTAB-5540:Root-prolonged-drought-replicate-2
0.3141
ERR1864444
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102895918 | INSDC last update 2017-03-01T23:45:20Z | Submitter Id E-MTAB-5540:Root-prolonged-drought-replicate-1 | organism part root | sample name E-MTAB-5540:Root-prolonged-drought-replicate-1
0.2965
ERR1864446
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102897418 | INSDC last update 2017-03-01T23:45:20Z | Submitter Id E-MTAB-5540:Root-prolonged-drought-replicate-3 | organism part root | sample name E-MTAB-5540:Root-prolonged-drought-replicate-3
-0.2313
ERR1864436
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102889918 | INSDC last update 2017-03-01T23:45:20Z | Submitter Id E-MTAB-5540:Leaf-short-term-salt-replicate-2 | organism part vascular leaf | sample name E-MTAB-5540:Leaf-short-term-salt-replicate-2
-0.2399
ERR1864435
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102889168 | INSDC last update 2017-03-01T23:45:20Z | Submitter Id E-MTAB-5540:Leaf-short-term-salt-replicate-1 | organism part vascular leaf | sample name E-MTAB-5540:Leaf-short-term-salt-replicate-1
-0.2831
ERR1864478
Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
External Id SAMEA102921418 | INSDC last update 2017-03-01T23:45:21Z | Submitter Id E-MTAB-5540:Stem-xylem-prolonged-salt-replicate-2 | organism part stem xylem | sample name E-MTAB-5540:Stem-xylem-prolonged-salt-replicate-2
3 SRP028843 SND1 Transcription Factor-Directed Quantitative Functional Hierarchical Genetic Regulatory Network in Wood Formation in Populus trichocarpa
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annotation
attributes
0.2594
SRR952887
transfection time 7 hours | overexpressed gene sGFP (control)
0.2102
SRR952896
transfection time 7 hours | overexpressed gene PtrSND1-B1+sGFP
0.1904
SRR952886
transfection time 7 hours | overexpressed gene sGFP (control)
-0.1658
SRR952891
transfection time 12 hours | overexpressed gene sGFP (control)
-0.1752
SRR952900
transfection time 12 hours | overexpressed gene PtrSND1-B1+sGFP
-0.1847
SRR952894
transfection time 25 hours | overexpressed gene sGFP (control)
4 SRP074300 RNA-seq of major tissues and xylem cell types of Populus trichocarpa
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annotation
attributes
0.2211
SRR3473004
source_name Stem differentiating xylem | tissue Stem differentiating xylem
0.16
SRR3472998
source_name Phloem | tissue Phloem
0.1596
SRR3472992
source_name Shoot tip | tissue Shoot tip
-0.2443
SRR3473007
source_name Xylem fiber cells | tissue Xylem | cell type Fiber cell
-0.2454
SRR3473006
source_name Xylem fiber cells | tissue Xylem | cell type Fiber cell
-0.2543
SRR3473008
source_name Xylem fiber cells | tissue Xylem | cell type Fiber cell
5 SRP201788 A genome assembly and the somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa [RNA-Seq]
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annotation
attributes
0.1989
SRR9321776
0.1844
SRR9668895
0.1828
SRR9668897
-0.1639
SRR9668927
-0.1757
SRR9668923
-0.244
SRR9668920
6 SRP103219 Differential gene expression analysis of drought responsive sense and antisense genes in Populus
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annotation
attributes
0.1965
SRR5423503
source_name control_long-term_young leaves | type control | drought treatment long-term | tissue young leaves | molecule subtype mRNA
0.1507
SRR5423435
source_name drought treated_short-term_mature leaves | type drought treated | drought treatment short-term | tissue mature leaves | molecule subtype total RNA
0.1479
SRR5423426
source_name drought treated_short-term_mature leaves | type drought treated | drought treatment short-term | tissue mature leaves | molecule subtype total RNA
-0.1796
SRR5423590
source_name drought treated_long-term_root | type drought treated | drought treatment long-term | tissue root | molecule subtype mRNA
-0.1915
SRR5423572
source_name control_long-term_root | type control | drought treatment long-term | tissue root | molecule subtype mRNA
-0.2104
SRR5423555
source_name control_long-term_root | type control | drought treatment long-term | tissue root | molecule subtype mRNA
7 SRP271234 RNAseq of transfected protoplasts of Populus trichocarpa
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annotation
attributes
0.1391
SRR12192594
transfected genes PtrMYB092
0.1375
SRR12192595
transfected genes PtrMYB092
0.1146
SRR12192584
transfected genes PtrHSFB3-1
-0.1159
SRR12192581
transfected genes GFP
-0.1988
SRR12192579
transfected genes GFP
-0.2041
SRR12192578
transfected genes GFP
8 SRP072680 Populus trichocarpa Transcriptome or Gene expression
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annotation
attributes
0.1172
SRR3317189
isolate tree1 | tissue xylem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95629
0.1079
SRR3317476
isolate tree5 | tissue phloem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95636
0.057
SRR3317480
isolate tree5 | tissue xylem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95637
-0.1023
SRR3317207
isolate tree3 | tissue phloem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95632
-0.1063
SRR3317206
isolate tree2 | tissue xylem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95631
-0.1491
SRR3317201
isolate tree2 | tissue phloem | biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95630
9 SRP072040 RNAseq of drought treated Populus trichocarpa
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annotation
attributes
0.1039
SRR3241535
days after drought treatment 7 day
0.0783
SRR3241536
days after drought treatment 7 day
0.0442
SRR3241531
days after drought treatment 5 day
-0.0535
SRR3241529
days after drought treatment 0 day
-0.085
SRR3241533
days after drought treatment 5 day
-0.2289
SRR3241532
days after drought treatment 5 day
10 SRP035471 Ptr-miR397a is a negative regulator of laccase genes affecting lignin content in Populus trichocarpa
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annotation
attributes
0.0944
SRR1121303
genotype wild type
0.0547
SRR1121293
genotype over expression miR397a
0.0498
SRR1121302
genotype wild type
-0.0445
SRR1121299
genotype over expression miR397a
-0.0518
SRR1121294
genotype over expression miR397a
-0.1018
SRR1121295
genotype over expression miR397a
Upper 100 Genes
Symbol
Function*
Entrez Gene ID*
Other ID
PC
LOC112323789
ribulose bisphosphate carboxylase large chain
112323789
22.65
LOC7474559
glyceraldehyde-3-phosphate dehydrogenase GAPB, chloroplastic
7474559
POPTR_002G007100v3
18.88
LOC7488408
phosphomannomutase/phosphoglucomutase
7488408
POPTR_008G131400v3
17.37
LOC7477443
phenolic glucoside malonyltransferase 1
7477443
POPTR_004G096300v3
15.29
LOC7471699
heavy metal-associated isoprenylated plant protein 47
7471699
POPTR_001G468500v3
14.97
LOC7468533
triacylglycerol lipase 2
7468533
POPTR_014G159800v3
14.94
LOC112323884
NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic
112323884
POPTR_013G074800v3
14.31
LOC7496826
carbonic anhydrase 2
7496826
POPTR_001G348900v3
13.70
LOC7485534
thiamine thiazole synthase 2, chloroplastic
7485534
POPTR_011G025200v3
13.15
LOC18099625
abscisic stress-ripening protein 3
18099625
POPTR_005G193600v3
12.93
LOC7473220
uncharacterized LOC7473220
7473220
POPTR_008G189100v3
12.68
LOC7470700
GATA transcription factor 21
7470700
POPTR_006G229200v3
12.60
LOC18107754
GDSL esterase/lipase At4g30140
18107754
POPTR_018G089100v3
12.14
LOC18105327
protein ECERIFERUM 1
18105327
POPTR_014G152300v3
11.77
LOC7465173
peroxidase 4
7465173
POPTR_013G156400v3
11.28
LOC7489892
cellulose synthase-like protein H1
7489892
POPTR_002G227300v3
11.21
LOC18104342
metalloendoproteinase 1
18104342
POPTR_013G100400v3
10.93
LOC18100793
uncharacterized LOC18100793
18100793
POPTR_006G279200v3
10.83
LOC7469083
glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplastic
7469083
POPTR_008G195100v3
10.81
LOC18094143
ABC transporter B family member 2
18094143
POPTR_001G139700v3
10.69
LOC18100212
MLO-like protein 3
18100212
POPTR_006G129700v3
10.67
LOC7497387
indole-3-acetic acid-amido synthetase GH3.10
7497387
POPTR_013G144300v3
10.30
LOC18110360
GDSL esterase/lipase At5g45670
18110360
POPTR_018G089300v3
10.24
LOC7463142
11-beta-hydroxysteroid dehydrogenase 1B
7463142
POPTR_015G099900v3
10.18
LOC7488951
GDSL esterase/lipase At1g29660
7488951
POPTR_018G088800v3
10.13
LOC7461668
transcription factor FAMA
7461668
POPTR_001G314400v3
10.09
LOC112326879
auxin-binding protein ABP19a-like
112326879
POPTR_003G065300v3
10.05
LOC7458811
RING-H2 finger protein ATL73
7458811
POPTR_019G130100v3
9.98
LOC18105329
protein ECERIFERUM 1
18105329
POPTR_014G152600v3
9.93
LOC7476747
21 kDa protein
7476747
POPTR_015G128200v3
9.89
LOC7475695
auxin-binding protein ABP19a
7475695
POPTR_013G141900v3
9.80
LOC7488717
mitoferrin
7488717
POPTR_016G125200v3
9.69
LOC7485279
protein ECERIFERUM 3
7485279
POPTR_006G177500v3
9.11
LOC18103394
G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290
18103394
POPTR_T023400v3
9.00
LOC7485626
high mobility group B protein 9
7485626
POPTR_005G246700v3
8.92
LOC7474554
protein PLASTID MOVEMENT IMPAIRED 1
7474554
POPTR_002G006100v3
8.91
LOC7454978
photosystem II 10 kDa polypeptide, chloroplastic
7454978
POPTR_011G142200v3
8.87
LOC7484386
WD repeat-containing protein RUP2
7484386
POPTR_012G140200v3
8.50
LOC18110359
GDSL esterase/lipase At1g29670
18110359
POPTR_018G089200v3
8.43
LOC18096332
axial regulator YABBY 1
18096332
POPTR_002G145100v3
8.40
LOC7461684
ABC transporter G family member 11
7461684
POPTR_001G311500v3
8.33
LOC7461568
GDSL esterase/lipase At1g29670
7461568
POPTR_018G088500v3
8.18
LOC7494801
very-long-chain 3-oxoacyl-CoA reductase-like protein At1g24470
7494801
POPTR_008G181600v3
8.05
LOC7464926
putative ripening-related protein 1
7464926
POPTR_014G082700v3
8.04
LOC7457566
uncharacterized LOC7457566
7457566
POPTR_009G094100v3
7.95
LOC7475097
uncharacterized LOC7475097
7475097
POPTR_001G188700v3
7.93
LOC7470576
uncharacterized LOC7470576
7470576
POPTR_001G188400v3
7.88
psbL
photosystem II protein L
4929685
Poptr_cp038
7.67
LOC7454979
(-)-germacrene D synthase
7454979
POPTR_011G142800v3
7.55
LOC7494760
ammonium transporter 1 member 1
7494760
POPTR_008G173800v3
7.50
LOC7497425
protein NUCLEAR FUSION DEFECTIVE 4
7497425
POPTR_013G154000v3
7.48
LOC18105332
protein ECERIFERUM 1
18105332
POPTR_014G152900v3
7.45
LOC7490946
auxin-binding protein ABP19a
7490946
POPTR_001G169000v3
7.30
LOC7486657
cyanogenic beta-glucosidase
7486657
POPTR_001G225900v3
7.28
LOC7468122
galactinol synthase 1
7468122
POPTR_010G150400v3
7.12
LOC18094956
cyanogenic beta-glucosidase
18094956
POPTR_001G226100v3
7.00
LOC7497748
uncharacterized LOC7497748
7497748
POPTR_007G003600v3
6.93
LOC18098821
uncharacterized LOC18098821
18098821
POPTR_005G037600v3
6.73
LOC7469566
transcription activator GLK1
7469566
POPTR_007G136900v3
6.71
LOC7494283
indole-3-acetic acid-induced protein ARG7
7494283
POPTR_009G126700v3
6.55
LOC7496915
ABC transporter B family member 13
7496915
POPTR_002G019600v3
6.51
LOC18099931
uncharacterized LOC18099931
18099931
6.48
LOC7461760
O-glucosyltransferase rumi homolog
7461760
POPTR_002G157800v3
6.48
LOC7489432
GDSL esterase/lipase At1g29670
7489432
POPTR_018G089400v3
6.44
LOC18107988
pelargonidin 3-O-(6-caffeoylglucoside) 5-O-(6-O-malonylglucoside) 4'''-malonyltransferase
18107988
POPTR_019G001200v3
6.41
LOC18109921
eugenol synthase 1
18109921
POPTR_013G103900v3
6.29
LOC7495972
myb-related protein 306
7495972
POPTR_017G082500v3
6.28
LOC7479199
peroxisomal membrane protein 11B
7479199
POPTR_003G108900v3
6.13
LOC7470927
uncharacterized LOC7470927
7470927
POPTR_011G132900v3
6.09
LOC7461284
transcription factor FAMA
7461284
POPTR_017G054500v3
5.94
LOC7470242
uncharacterized LOC7470242
7470242
POPTR_004G050600v3
5.88
LOC18106312
uncharacterized LOC18106312
18106312
5.77
LOC18097807
probable carboxylesterase 1
18097807
POPTR_004G142900v3
5.65
LOC18104108
tyrosine decarboxylase 1
18104108
POPTR_013G052900v3
5.64
LOC7469878
protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5
7469878
POPTR_019G034000v3
5.48
LOC18104308
eugenol synthase 1
18104308
POPTR_013G104000v3
5.34
LOC7463791
UDP-glycosyltransferase 79B6
7463791
POPTR_011G097900v3
5.29
LOC7493527
BEL1-like homeodomain protein 11
7493527
POPTR_005G232000v3
5.03
LOC112325786
transcription activator GLK1-like
112325786
POPTR_T098900v3
4.98
LOC18108586
indole-3-acetic acid-amido synthetase GH3.10
18108586
POPTR_019G103500v3
4.93
LOC7461571
GDSL esterase/lipase At1g29660
7461571
POPTR_018G088600v3
4.59
LOC7473472
sphingolipid C9-methyltransferase 2
7473472
POPTR_008G170300v3
4.45
LOC18098121
uncharacterized LOC18098121
18098121
POPTR_004G202900v3
4.40
LOC7458281
GDSL esterase/lipase At2g42990
7458281
POPTR_002G219700v3
4.36
LOC7488356
3-ketoacyl-CoA synthase 6
7488356
POPTR_008G120300v3
4.36
LOC7463062
transcription factor TCP13
7463062
POPTR_T146100v3
4.35
LOC7468536
GDSL esterase/lipase At2g04570
7468536
POPTR_014G160100v3
4.34
LOC7462884
abscisic acid 8'-hydroxylase 4
7462884
POPTR_002G126100v3
4.27
LOC7495248
pectinesterase inhibitor 6
7495248
POPTR_014G129400v3
4.25
LOC18107914
ABC transporter G family member 11
18107914
POPTR_018G152600v3
4.22
LOC7493492
WUSCHEL-related homeobox 1
7493492
POPTR_012G047700v3
3.94
LOC7464028
protein RADIALIS-like 2
7464028
POPTR_009G116600v3
3.92
LOC7476749
21 kDa protein
7476749
POPTR_015G128400v3
3.91
LOC18106924
3-oxo-Delta(4,5)-steroid 5-beta-reductase
18106924
POPTR_017G030400v3
3.85
LOC112327900
ABC transporter G family member 11-like
112327900
POPTR_001G312200v3
3.84
LOC7476301
GDSL esterase/lipase At1g29670
7476301
POPTR_004G064500v3
3.76
LOC7468347
uncharacterized protein PAM68-like
7468347
POPTR_004G072900v3
3.57
LOC7493857
protein DETOXIFICATION 24
7493857
POPTR_013G069200v3
3.56
LOC7478666
uncharacterized LOC7478666
7478666
POPTR_001G292000v3
3.55
LOC7471087
galactinol synthase 1
7471087
POPTR_008G101000v3
3.47
Upper 100 Genes
Symbol
Function*
Entrez Gene ID*
Other ID
PC
LOC7470544
uncharacterized LOC7470544
7470544
POPTR_001G204300v3
70.71
psbA
photosystem II protein D1
4929629
Poptr_cp001
69.37
LOC7484743
photosynthetic NDH subunit of subcomplex B 4, chloroplastic
7484743
POPTR_012G068500v3
67.30
LOC18096313
J domain-containing protein required for chloroplast accumulation response 1
18096313
POPTR_002G134300v3
66.48
LOC7494389
uncharacterized LOC7494389
7494389
POPTR_013G090200v3
61.76
LOC7465539
protein DETOXIFICATION 27
7465539
POPTR_007G010200v3
60.96
LOC7470027
fructose-bisphosphate aldolase 1, chloroplastic
7470027
POPTR_004G162400v3
60.75
LOC7453596
sodium/calcium exchanger NCL2
7453596
POPTR_001G375400v3
60.75
LOC7473428
1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 1
7473428
POPTR_008G157400v3
59.26
LOC7462891
BRI1 kinase inhibitor 1
7462891
POPTR_002G127100v3
58.96
LOC7494712
glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic
7494712
POPTR_005G254100v3
58.61
LOC7484859
ACT domain-containing protein ACR6
7484859
POPTR_012G102200v3
58.22
LOC7460752
uncharacterized LOC7460752
7460752
POPTR_010G046400v3
58.14
LOC18096946
glycine cleavage system H protein 3, mitochondrial
18096946
POPTR_003G089300v3
57.60
LOC7478511
glucan endo-1,3-beta-glucosidase
7478511
POPTR_001G255100v3
57.52
LOC7493921
uncharacterized LOC7493921
7493921
POPTR_013G085300v3
57.39
rbcL
ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
4929677
Poptr_cp030
57.30
LOC18095522
peroxisomal (S)-2-hydroxy-acid oxidase
18095522
POPTR_001G394400v3
57.28
LOC18094258
photosynthetic NDH subunit of subcomplex B 1, chloroplastic
18094258
POPTR_001G044300v3
57.27
LOC7488015
chlorophyll a-b binding protein CP29.3, chloroplastic
7488015
POPTR_008G067300v3
57.26
LOC7494720
protein PLASTID MOVEMENT IMPAIRED 1
7494720
POPTR_005G255500v3
57.07
LOC7458470
cellulose synthase-like protein E6
7458470
POPTR_006G004300v3
57.02
LOC7458602
photosynthetic NDH subunit of lumenal location 1, chloroplastic
7458602
POPTR_010G210000v3
56.75
LOC7463993
fructose-bisphosphate aldolase 1, chloroplastic
7463993
POPTR_009G124100v3
56.69
LOC18099496
ribulose bisphosphate carboxylase small chain, chloroplastic
18099496
POPTR_017G114600v3
56.54
LOC18096890
expansin-like B1
18096890
POPTR_003G083200v3
56.27
rps14
ribosomal protein S14
4929661
Poptr_cp020
56.19
LOC7495216
calvin cycle protein CP12-2, chloroplastic
7495216
POPTR_014G120700v3
56.01
LOC7486795
homeobox-leucine zipper protein ATHB-7
7486795
POPTR_014G103000v3
55.91
LOC18104499
ATP synthase delta chain, chloroplastic
18104499
POPTR_013G117000v3
55.67
LOC112324764
uncharacterized LOC112324764
112324764
55.62
LOC18107608
putative GATA transcription factor 22
18107608
POPTR_018G053600v3
55.47
LOC7465099
abscisic acid 8'-hydroxylase 2
7465099
POPTR_001G242600v3
55.34
LOC7461652
probable sucrose-phosphate synthase 3
7461652
POPTR_001G317600v3
55.32
LOC112324789
berberine bridge enzyme-like 8
112324789
POPTR_001G462400v3
55.17
psaA
photosystem I P700 chlorophyll a apoprotein A1
4929663
Poptr_cp022
54.88
LOC18094096
phosphoribulokinase, chloroplastic
18094096
POPTR_001G134000v3
54.78
LOC112327176
transcription factor TCP13
112327176
POPTR_004G116100v3
54.77
LOC7460564
uncharacterized LOC7460564
7460564
POPTR_001G059500v3
54.72
LOC7463062
transcription factor TCP13
7463062
POPTR_T146100v3
54.70
LOC7488717
mitoferrin
7488717
POPTR_016G125200v3
54.65
psaB
photosystem I P700 chlorophyll a apoprotein A2
4929662
Poptr_cp021
54.52
LOC7454978
photosystem II 10 kDa polypeptide, chloroplastic
7454978
POPTR_011G142200v3
54.42
LOC7470239
uncharacterized LOC7470239
7470239
POPTR_004G051500v3
54.18
LOC18104420
NAD(P)H-quinone oxidoreductase subunit T, chloroplastic
18104420
POPTR_013G109000v3
54.03
LOC7490927
PGR5-like protein 1A, chloroplastic
7490927
POPTR_001G113000v3
53.93
LOC18110663
ankyrin repeat-containing protein At5g02620
18110663
POPTR_019G107800v3
53.83
LOC7478371
boron transporter 4
7478371
POPTR_003G059700v3
53.45
LOC112325189
metallothionein-like protein type 3
112325189
POPTR_001G400100v3
53.40
LOC18110661
ankyrin repeat-containing protein At5g02620
18110661
POPTR_019G105900v3
53.39
LOC7459773
NAD(P)H-quinone oxidoreductase subunit L, chloroplastic
7459773
POPTR_010G110400v3
53.32
LOC7485810
basic leucine zipper 1
7485810
POPTR_010G142900v3
53.31
LOC7475781
carboxymethylenebutenolidase homolog
7475781
POPTR_019G079000v3
53.28
LOC7495652
uncharacterized LOC7495652
7495652
POPTR_006G025200v3
53.17
LOC7484381
low-temperature-induced 65 kDa protein
7484381
POPTR_012G141300v3
53.17
LOC18109283
universal stress protein A-like protein
18109283
POPTR_014G122000v3
53.09
LOC7485534
thiamine thiazole synthase 2, chloroplastic
7485534
POPTR_011G025200v3
52.98
LOC7469191
2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial
7469191
POPTR_005G185400v3
52.88
LOC18108612
ankyrin repeat-containing protein At5g02620
18108612
POPTR_019G107700v3
52.81
psbE
photosystem II protein V
4929687
Poptr_cp040
52.70
LOC7496048
linoleate 13S-lipoxygenase 2-1, chloroplastic
7496048
POPTR_001G015400v3
52.70
LOC7463155
photosystem II 22 kDa protein, chloroplastic
7463155
POPTR_002G083500v3
52.70
LOC7455512
serine hydroxymethyltransferase 1, mitochondrial
7455512
POPTR_010G254700v3
52.69
LOC18099625
abscisic stress-ripening protein 3
18099625
POPTR_005G193600v3
52.54
LOC18107022
isoprene synthase, chloroplastic
18107022
POPTR_017G041700v3
52.25
LOC18095468
polyphenol oxidase, chloroplastic
18095468
POPTR_001G388900v3
52.22
LOC7489649
NAC transcription factor 47
7489649
POPTR_013G054000v3
52.17
LOC7466033
fructose-1,6-bisphosphatase, chloroplastic
7466033
POPTR_016G106900v3
52.06
LOC7468347
uncharacterized protein PAM68-like
7468347
POPTR_004G072900v3
51.96
LOC18101595
1-aminocyclopropane-1-carboxylate oxidase homolog 1
18101595
POPTR_008G165400v3
51.92
LOC18099186
chaperone protein dnaJ 11, chloroplastic
18099186
POPTR_005G113100v3
51.86
LOC18096085
probable nucleoredoxin 2
18096085
POPTR_002G017200v3
51.84
LOC7478091
geraniol 8-hydroxylase
7478091
POPTR_001G113900v3
51.73
LOC7498046
photosynthetic NDH subunit of subcomplex B 5, chloroplastic
7498046
POPTR_010G078800v3
51.72
LOC7495269
sugar carrier protein C
7495269
POPTR_011G042100v3
51.72
LOC7477424
ribulose bisphosphate carboxylase small chain, chloroplastic
7477424
POPTR_004G100000v3
51.70
LOC7461489
uncharacterized LOC7461489
7461489
POPTR_002G256900v3
51.69
LOC7456397
protein TIC 62, chloroplastic
7456397
POPTR_009G111400v3
51.68
LOC7492113
NAC domain-containing protein 21/22
7492113
POPTR_005G098200v3
51.59
LOC7497748
uncharacterized LOC7497748
7497748
POPTR_007G003600v3
51.55
LOC7461601
uncharacterized protein At4g14100
7461601
POPTR_T094000v3
51.54
LOC7457777
uncharacterized LOC7457777
7457777
POPTR_015G084200v3
51.54
psbJ
photosystem II protein J
4929684
Poptr_cp037
51.51
LOC7477824
metal-nicotianamine transporter YSL1
7477824
POPTR_001G084400v3
51.47
LOC7464751
NAD(P)H-quinone oxidoreductase subunit N, chloroplastic
7464751
POPTR_013G160600v3
51.37
LOC7477130
uncharacterized LOC7477130
7477130
POPTR_005G084400v3
51.28
LOC7491901
type I inositol polyphosphate 5-phosphatase 2
7491901
POPTR_003G088300v3
51.14
LOC112324528
fructose-1,6-bisphosphatase, chloroplastic-like
112324528
POPTR_016G108900v3
51.05
LOC7492123
catalase-2
7492123
POPTR_005G100400v3
51.04
LOC7472471
2-methylene-furan-3-one reductase
7472471
POPTR_016G136100v3
51.03
psbD
photosystem II protein D2
4929654
Poptr_cp016
50.97
LOC7453636
chaperone protein dnaJ 11, chloroplastic
7453636
POPTR_004G172300v3
50.90
LOC7458129
ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
7458129
POPTR_010G200500v3
50.76
atpB
ATP synthase CF1 beta subunit
4929676
Poptr_cp029
50.73
LOC7497858
glutaredoxin domain-containing cysteine-rich protein 1
7497858
POPTR_003G141800v3
50.66
LOC7474554
protein PLASTID MOVEMENT IMPAIRED 1
7474554
POPTR_002G006100v3
50.56
LOC18104570
serine carboxypeptidase-like 3
18104570
POPTR_013G124900v3
50.53
LOC7475965
monothiol glutaredoxin-S2
7475965
POPTR_010G021800v3
50.45
LOC7479199
peroxisomal membrane protein 11B
7479199
POPTR_003G108900v3
50.40
LOC7494653
root phototropism protein 2
7494653
POPTR_019G131600v3
50.37
Upper 100 Genes
Symbol
Function*
Entrez Gene ID*
Other ID
PC
LOC7485810
basic leucine zipper 1
7485810
POPTR_010G142900v3
61.70
LOC18100635
uncharacterized LOC18100635
18100635
61.58
LOC7493967
snakin-2
7493967
POPTR_T155100v3
60.83
LOC7492427
glu S.griseus protease inhibitor
7492427
POPTR_010G075400v3
59.07
LOC18104336
bark storage protein B
18104336
POPTR_013G101000v3
57.47
LOC7481640
CASP-like protein 1D1
7481640
POPTR_008G205000v3
57.38
LOC18096890
expansin-like B1
18096890
POPTR_003G083200v3
56.68
LOC7496123
zeatin O-glucosyltransferase
7496123
POPTR_006G048200v3
56.59
LOC7491938
uncharacterized LOC7491938
7491938
55.73
LOC7492113
NAC domain-containing protein 21/22
7492113
POPTR_005G098200v3
55.05
LOC18101623
probable glutathione S-transferase
18101623
POPTR_008G175100v3
54.89
LOC7474610
pro-hevein
7474610
POPTR_013G041600v3
54.82
LOC7470435
endochitinase 2
7470435
POPTR_004G182000v3
54.62
LOC7475437
cell wall / vacuolar inhibitor of fructosidase 1
7475437
POPTR_010G063000v3
54.46
LOC112325259
wound-responsive protein GWIN3-like
112325259
POPTR_019G124500v3
54.37
LOC7459997
myb-related protein 305
7459997
POPTR_010G064000v3
54.20
LOC7480705
basic 7S globulin
7480705
POPTR_002G054900v3
54.15
LOC18108653
wound-responsive protein GWIN3
18108653
POPTR_019G122100v3
53.49
LOC112325152
wound-responsive protein GWIN3-like
112325152
POPTR_019G124700v3
53.45
LOC7488130
uncharacterized LOC7488130
7488130
53.44
LOC7460421
protein LURP-one-related 15
7460421
POPTR_016G131600v3
53.41
LOC7482890
MLP-like protein 328
7482890
POPTR_008G131200v3
52.85
LOC7478024
probable polyol transporter 3
7478024
POPTR_007G027900v3
52.77
LOC18104481
sucrose transport protein SUC8
18104481
POPTR_013G115200v3
52.33
LOC7480097
cytochrome P450 87A3
7480097
POPTR_001G270400v3
51.79
LOC7495163
7-deoxyloganetin glucosyltransferase
7495163
POPTR_002G098400v3
51.11
LOC18103911
extensin-1
18103911
POPTR_012G120700v3
50.76
LOC18103031
uncharacterized LOC18103031
18103031
POPTR_011G053300v3
50.68
LOC7478026
phosphatidylinositol transfer protein 3
7478026
POPTR_007G025900v3
50.46
LOC7495964
uncharacterized LOC7495964
7495964
49.85
LOC7464930
cationic peroxidase 1
7464930
POPTR_013G154400v3
49.72
LOC18104339
bark storage protein A
18104339
POPTR_013G100700v3
49.63
LOC7478680
pathogenesis-related protein 1
7478680
POPTR_001G288600v3
49.63
LOC18102814
major allergen Pru ar 1
18102814
POPTR_011G026200v3
49.53
LOC18108092
alpha-amylase/subtilisin inhibitor
18108092
POPTR_019G011000v3
49.48
LOC7494660
probable glutathione S-transferase parA
7494660
POPTR_019G130600v3
49.40
LOC7471112
bZIP transcription factor 53
7471112
POPTR_008G106700v3
49.29
LOC7489112
cannabidiolic acid synthase-like 1
7489112
POPTR_011G158100v3
49.13
LOC7477401
uncharacterized LOC7477401
7477401
POPTR_004G044300v3
49.11
LOC7494050
BON1-associated protein 2
7494050
POPTR_002G155300v3
49.04
LOC7463865
cytochrome P450 705A5
7463865
POPTR_001G270900v3
48.84
LOC18097308
miraculin
18097308
POPTR_004G000400v3
48.59
LOC18101322
putative glycine-rich cell wall structural protein 1
18101322
POPTR_008G028100v3
48.23
LOC7484341
ethylene-responsive transcription factor ERF113
7484341
POPTR_012G108500v3
48.13
LOC7497347
putative expansin-B2
7497347
POPTR_014G066300v3
48.11
LOC7469862
NAC transcription factor 47
7469862
POPTR_019G031400v3
47.92
LOC18094172
AT-hook motif nuclear-localized protein 23
18094172
POPTR_001G142800v3
47.92
LOC7478098
AT-hook motif nuclear-localized protein 26
7478098
POPTR_001G115200v3
47.86
LOC18108801
probable glutathione S-transferase
18108801
POPTR_008G175000v3
47.65
LOC18106197
uncharacterized LOC18106197
18106197
47.64
LOC112323232
probable glutathione S-transferase parA
112323232
POPTR_T178900v3
47.35
LOC7488716
peroxidase N1
7488716
POPTR_016G125000v3
47.01
LOC7482802
bidirectional sugar transporter SWEET15
7482802
POPTR_001G060900v3
46.95
LOC7489720
peroxidase 10
7489720
POPTR_005G135300v3
46.82
LOC7468636
uncharacterized LOC7468636
7468636
POPTR_006G254300v3
46.77
LOC7492415
ethylene-responsive transcription factor 1B
7492415
POPTR_010G072300v3
46.76
LOC112325750
leucine-rich repeat extensin-like protein 3
112325750
POPTR_T089100v3
46.76
LOC7455621
F-box/kelch-repeat protein At1g15670
7455621
POPTR_006G196900v3
46.54
LOC7492425
AT-hook motif nuclear-localized protein 20
7492425
POPTR_010G074200v3
46.44
LOC7463352
3-hydroxy-3-methylglutaryl-coenzyme A reductase 1
7463352
POPTR_009G169900v3
46.41
LOC18104971
cytochrome P450 CYP82D47
18104971
POPTR_014G037900v3
46.31
LOC7464012
protein CASPARIAN STRIP INTEGRITY FACTOR 1
7464012
POPTR_009G119900v3
46.06
LOC18094584
ethylene-responsive transcription factor 2
18094584
POPTR_001G154100v3
45.93
LOC18095117
cytochrome P450 87A3
18095117
POPTR_001G270500v3
45.77
LOC7463862
cytochrome P450 87A3
7463862
POPTR_001G270600v3
45.71
LOC7474965
basic endochitinase
7474965
POPTR_009G141700v3
45.70
LOC7457797
nudix hydrolase 18, mitochondrial
7457797
POPTR_008G134000v3
45.46
LOC7494600
seed biotin-containing protein SBP65
7494600
POPTR_019G090300v3
45.45
LOC18106458
heavy metal-associated isoprenylated plant protein 39
18106458
POPTR_017G147400v3
45.28
LOC18106689
kunitz trypsin inhibitor 2
18106689
POPTR_017G153200v3
45.27
LOC112328702
uncharacterized LOC112328702
112328702
45.22
LOC18102120
salicylic acid-binding protein 2
18102120
POPTR_009G107300v3
45.12
LOC7474032
CEN-like protein 1
7474032
POPTR_015G141300v3
44.83
LOC7479328
osmotin-like protein OSM34
7479328
POPTR_001G107600v3
44.83
LOC7474976
acetylserotonin O-methyltransferase
7474976
POPTR_009G139700v3
44.75
LOC7460419
protein LURP-one-related 15
7460419
POPTR_016G131400v3
44.53
LOC7465813
AT-hook motif nuclear-localized protein 24
7465813
POPTR_003G116900v3
44.33
LOC7482889
MLP-like protein 43
7482889
POPTR_008G131100v3
44.33
LOC18104932
patatin-like protein 2
18104932
POPTR_014G034000v3
44.13
LOC112326887
extensin-2-like
112326887
POPTR_001G019900v3
43.84
LOC18103101
pathogenesis-related genes transcriptional activator PTI5
18103101
POPTR_011G061700v3
43.74
LOC7461382
peroxidase 15
7461382
POPTR_003G214900v3
43.69
LOC7485450
polyphenol oxidase, chloroplastic
7485450
POPTR_011G047300v3
43.64
LOC112327227
germin-like protein subfamily 1 member 13
112327227
POPTR_004G180000v3
43.54
LOC112328218
extensin-2-like
112328218
POPTR_001G020000v3
43.51
LOC7460657
endoglucanase 12
7460657
POPTR_008G079500v3
43.45
LOC7484381
low-temperature-induced 65 kDa protein
7484381
POPTR_012G141300v3
43.45
LOC7480906
glutathione transferase GST 23
7480906
POPTR_008G174900v3
43.39
LOC7483782
cytochrome P450 734A1
7483782
POPTR_002G134500v3
43.32
LOC7490361
uncharacterized LOC7490361
7490361
POPTR_010G196400v3
43.29
LOC7487693
AT-hook motif nuclear-localized protein 19
7487693
POPTR_013G044500v3
43.07
LOC7498031
uncharacterized LOC7498031
7498031
42.99
LOC7489699
GDSL esterase/lipase 1
7489699
POPTR_013G065100v3
42.97
LOC7485893
uncharacterized LOC7485893
7485893
42.61
LOC112327209
germin-like protein subfamily 1 member 16
112327209
POPTR_004G180200v3
42.45
LOC7483295
GDSL esterase/lipase At1g74460
7483295
POPTR_012G068700v3
42.40
LOC7461573
peroxidase 45
7461573
POPTR_018G089900v3
42.36
LOC7457517
uncharacterized LOC7457517
7457517
POPTR_009G106000v3
42.16
LOC7489265
probable esterase PIR7A
7489265
POPTR_009G107500v3
42.04
LOC7485536
major allergen Pru ar 1
7485536
POPTR_011G026000v3
42.04
Upper 100 Genes
Symbol
Function*
Entrez Gene ID*
Other ID
PC
LOC7463703
microtubule-associated protein 70-5
7463703
POPTR_006G018000v3
41.47
LOC7468619
L-type lectin-domain containing receptor kinase I.8
7468619
POPTR_009G035800v3
36.07
LOC7494473
laccase-4
7494473
POPTR_008G064000v3
35.15
LOC18106496
protein TPX2
18106496
POPTR_T059900v3
34.87
LOC18099998
dynein light chain LC6, flagellar outer arm
18099998
POPTR_006G091800v3
34.80
LOC7467100
probable GABA transporter 2
7467100
POPTR_001G093600v3
34.76
LOC7461839
oligopeptide transporter 2
7461839
POPTR_002G109300v3
34.53
LOC7491458
plasma membrane-associated cation-binding protein 1
7491458
POPTR_001G073900v3
34.32
LOC7454937
laccase-17
7454937
POPTR_006G087500v3
34.27
LOC7495835
fasciclin-like arabinogalactan protein 12
7495835
POPTR_001G320800v3
33.33
LOC18103191
uncharacterized LOC18103191
18103191
33.22
LOC112328687
uncharacterized LOC112328687
112328687
32.77
LOC7494613
probable carotenoid cleavage dioxygenase 4, chloroplastic
7494613
POPTR_019G093400v3
31.77
LOC7483653
E3 ubiquitin-protein ligase At4g11680
7483653
POPTR_011G094800v3
31.70
LOC7471179
protein NRT1/ PTR FAMILY 4.2
7471179
POPTR_002G249100v3
31.70
LOC18094569
pelargonidin 3-O-(6-caffeoylglucoside) 5-O-(6-O-malonylglucoside) 4'''-malonyltransferase
18094569
POPTR_001G152500v3
31.61
LOC7494563
protein trichome birefringence-like 19
7494563
POPTR_004G105600v3
31.34
LOC7474082
microtubule-associated protein 70-5
7474082
POPTR_016G006900v3
31.20
LOC7474685
protein LURP-one-related 12
7474685
POPTR_006G067000v3
31.09
LOC7496936
SPX domain-containing membrane protein At4g22990
7496936
POPTR_014G078000v3
30.93
LOC7475075
laccase-2
7475075
POPTR_001G184300v3
30.89
LOC7473193
transcription factor HBI1
7473193
POPTR_007G023600v3
30.72
LOC18094393
protein ODORANT1
18094393
POPTR_001G118800v3
30.46
LOC18111132
glucuronoxylan 4-O-methyltransferase 1
18111132
30.41
LOC18102212
laccase-2
18102212
POPTR_009G156800v3
30.30
LOC7460060
glucan endo-1,3-beta-glucosidase 14
7460060
POPTR_009G163700v3
30.20
LOC18094088
bifunctional pinoresinol-lariciresinol reductase 2
18094088
POPTR_001G133200v3
29.89
LOC7486803
NAC domain-containing protein 43
7486803
POPTR_014G104800v3
29.83
LOC7466052
laccase-4
7466052
POPTR_016G112000v3
29.54
LOC7492393
galactinol synthase 1
7492393
POPTR_010G042000v3
29.43
LOC112326964
uncharacterized LOC112326964
112326964
29.38
LOC7489682
E3 ubiquitin-protein ligase SIRP1
7489682
POPTR_013G060500v3
29.37
LOC7490852
beta-glucuronosyltransferase GlcAT14A
7490852
POPTR_008G006500v3
29.37
LOC7493878
RING-H2 finger protein ATL52
7493878
POPTR_013G073500v3
29.36
LOC7487740
NAC domain-containing protein 43
7487740
POPTR_002G178700v3
29.30
LOC7455257
metalloendoproteinase 2-MMP
7455257
POPTR_019G073400v3
29.08
LOC18102210
laccase-2
18102210
POPTR_009G156600v3
29.08
LOC7468684
CBL-interacting serine/threonine-protein kinase 25
7468684
POPTR_006G263500v3
28.61
LOC18104918
uncharacterized LOC18104918
18104918
POPTR_014G032300v3
28.60
LOC7465150
zinc finger CCCH domain-containing protein 56
7465150
POPTR_001G258400v3
28.55
LOC7467609
probable beta-1,4-xylosyltransferase IRX9
7467609
POPTR_016G086400v3
28.45
LOC7458573
cysteine-rich receptor-like protein kinase 10
7458573
POPTR_004G024100v3
28.38
LOC7475190
fasciclin-like arabinogalactan protein 12
7475190
POPTR_015G013300v3
28.37
LOC7461337
kinesin-like protein KIN-14T
7461337
28.33
LOC7467861
1-aminocyclopropane-1-carboxylate oxidase 5
7467861
POPTR_002G078600v3
28.14
LOC7472295
O-fucosyltransferase 8
7472295
POPTR_011G068300v3
28.12
LOC7496525
probable beta-1,4-xylosyltransferase IRX10
7496525
POPTR_003G162000v3
28.05
LOC18101343
uncharacterized LOC18101343
18101343
POPTR_008G030200v3
27.99
LOC7477065
uncharacterized LOC7477065
7477065
POPTR_010G052100v3
27.89
LOC7495213
uncharacterized LOC7495213
7495213
POPTR_014G119900v3
27.83
LOC18100114
myosin-11
18100114
POPTR_006G120400v3
27.83
LOC7482638
uncharacterized LOC7482638
7482638
POPTR_016G006200v3
27.70
LOC7481523
laccase-2
7481523
POPTR_009G034500v3
27.68
LOC7457267
laccase-4
7457267
POPTR_010G193100v3
27.56
LOC18095407
probable xyloglucan galactosyltransferase GT17
18095407
POPTR_001G382200v3
27.47
LOC7488157
uncharacterized LOC7488157
7488157
POPTR_009G024700v3
27.38
LOC7495847
probable inorganic phosphate transporter 1-5
7495847
POPTR_001G318500v3
27.35
LOC7483772
probable galacturonosyltransferase-like 1
7483772
POPTR_002G132900v3
27.24
LOC18100226
probable beta-1,4-xylosyltransferase IRX9
18100226
POPTR_006G131000v3
27.18
LOC7462100
laccase-12
7462100
POPTR_008G073700v3
27.17
LOC18101650
receptor-like protein 1
18101650
POPTR_001G064600v3
27.02
LOC7464268
fasciclin-like arabinogalactan protein 12
7464268
26.95
LOC7468582
laccase-4
7468582
POPTR_009G042500v3
26.84
LOC7460461
uncharacterized LOC7460461
7460461
POPTR_002G195400v3
26.81
LOC7468487
probable pectinesterase/pectinesterase inhibitor 35
7468487
POPTR_014G149700v3
26.80
LOC7457387
protein trichome birefringence-like 26
7457387
POPTR_002G168400v3
26.74
LOC18101485
DNA-3-methyladenine glycosylase 1
18101485
POPTR_008G112300v3
26.72
LOC7463299
fasciclin-like arabinogalactan protein 12
7463299
POPTR_009G012100v3
26.58
LOC18097764
ferrochelatase-2, chloroplastic
18097764
POPTR_004G138400v3
26.54
LOC18095892
probable galacturonosyltransferase 12
18095892
POPTR_001G416800v3
26.49
LOC112325065
uncharacterized LOC112325065
112325065
26.41
LOC7498200
uncharacterized LOC7498200
7498200
POPTR_008G092700v3
26.40
LOC7463651
uncharacterized LOC7463651
7463651
POPTR_006G005600v3
26.32
LOC18101659
receptor-like protein 15
18101659
POPTR_001G063900v3
26.32
LOC7470925
probable galacturonosyltransferase 12
7470925
POPTR_011G132600v3
26.32
LOC7466087
protein trichome birefringence-like 3
7466087
POPTR_016G119100v3
26.23
LOC18107084
probable sucrose-phosphate synthase 3
18107084
POPTR_017G057800v3
26.22
LOC18103099
rac-like GTP-binding protein RAC13
18103099
POPTR_011G061500v3
26.21
LOC7462153
uncharacterized LOC7462153
7462153
POPTR_008G084100v3
26.15
LOC7470198
cellulose synthase A catalytic subunit 8 [UDP-forming]
7470198
POPTR_004G059600v3
26.12
LOC7464516
auxin-responsive protein SAUR32
7464516
POPTR_015G006800v3
26.06
LOC7489313
NDR1/HIN1-like protein 1
7489313
POPTR_009G019600v3
25.97
LOC112328980
uncharacterized LOC112328980
112328980
POPTR_001G232200v3
25.92
LOC7476331
O-fucosyltransferase 8
7476331
POPTR_004G058900v3
25.87
LOC7457176
sugar transport protein 10
7457176
POPTR_007G073800v3
25.85
LOC7466778
filament-like plant protein 3
7466778
POPTR_007G098500v3
25.71
LOC7464786
uncharacterized LOC7464786
7464786
25.66
LOC18095010
uncharacterized LOC18095010
18095010
POPTR_001G231600v3
25.63
LOC7453595
CRIB domain-containing protein RIC4
7453595
POPTR_019G053300v3
25.61
LOC18096240
uncharacterized LOC18096240
18096240
25.58
LOC7496398
fasciclin-like arabinogalactan protein 12
7496398
25.56
LOC7466250
probable serine/threonine-protein kinase WNK5
7466250
25.55
LOC18097720
uncharacterized LOC18097720
18097720
POPTR_004G126800v3
25.51
LOC18104206
LOB domain-containing protein 15
18104206
POPTR_013G081200v3
25.49
LOC7478054
remorin
7478054
POPTR_001G107000v3
25.48
LOC7470910
uncharacterized LOC7470910
7470910
POPTR_011G130400v3
25.44
LOC7487537
uncharacterized LOC7487537
7487537
POPTR_001G366500v3
25.41
LOC7456301
sugar transport protein 10
7456301
POPTR_007G073700v3
25.40
LOC18094154
RING-H2 finger protein ATL29
18094154
POPTR_001G140900v3
25.38
LOC7474829
uncharacterized LOC7474829
7474829
POPTR_015G036800v3
25.36
Upper 100 Genes
Symbol
Function*
Entrez Gene ID*
Other ID
PC
LOC7483980
18 kDa seed maturation protein
7483980
POPTR_016G046400v3
49.54
LOC18105360
ATP synthase subunit a
18105360
POPTR_014G168000v3
49.23
LOC18106132
11 kDa late embryogenesis abundant protein
18106132
POPTR_T111300v3
48.70
LOC112323708
small nucleolar RNA U3
112323708
47.83
LOC112327602
uncharacterized LOC112327602
112327602
47.60
LOC18104089
U1 spliceosomal RNA
18104089
47.33
LOC112323706
small nucleolar RNA U3
112323706
46.13
LOC112327719
U1 spliceosomal RNA
112327719
45.67
LOC112326599
uncharacterized LOC112326599
112326599
45.38
LOC7484381
low-temperature-induced 65 kDa protein
7484381
POPTR_012G141300v3
43.85
rps7
ribosomal protein S7
4929762
Poptr_cp093
43.54
psbE
photosystem II protein V
4929687
Poptr_cp040
43.47
LOC112323707
small nucleolar RNA U3
112323707
43.34
rps7
ribosomal protein S7
4929722
Poptr_cp070
43.31
LOC112329032
U1 spliceosomal RNA
112329032
43.30
psbJ
photosystem II protein J
4929684
Poptr_cp037
43.26
LOC112327851
uncharacterized LOC112327851
112327851
43.09
LOC112323709
small nucleolar RNA U3
112323709
43.06
petN
cytochrome b6/f complex subunit VIII
4929647
Poptr_cp013
42.75
clpP
ATP-dependent Clp protease proteolytic subunit
4929698
Poptr_cp048
42.73
psbA
photosystem II protein D1
4929629
Poptr_cp001
42.65
LOC112327722
U1 spliceosomal RNA
112327722
42.48
LOC18096120
CRIB domain-containing protein RIC6
18096120
POPTR_002G035500v3
42.14
Poptr_cpR019
tRNA-Val
4929673
Poptr_cpR019
41.41
ndhB
NADH dehydrogenase subunit 2
4929721
Poptr_cp069
41.21
psbF
photosystem II protein VI
4929686
Poptr_cp039
41.19
ndhB
NADH dehydrogenase subunit 2
4929763
Poptr_cp094
41.14
LOC112325900
U1 spliceosomal RNA
112325900
41.06
LOC112327826
uncharacterized LOC112327826
112327826
40.89
rps12
ribosomal protein S12
4929696
Poptr_cp091
40.64
rps12
ribosomal protein S12
4929628
Poptr_cp071
40.63
LOC112327718
U1 spliceosomal RNA
112327718
40.54
trnK
tRNA-Lys
4929630
Poptr_cpR002
40.49
psbK
photosystem II protein K
4929633
Poptr_cp003
40.32
Poptr_cp018
hypothetical protein
4929657
Poptr_cp018
40.30
LOC112325895
U1 spliceosomal RNA
112325895
40.21
LOC112325374
U1 spliceosomal RNA
112325374
40.11
LOC112328703
U1 spliceosomal RNA
112328703
39.99
cemA
envelope membrane protein
4929682
Poptr_cp035
39.81
LOC112324390
U1 spliceosomal RNA
112324390
39.60
rpl33
ribosomal protein L33
4929693
Poptr_cp044
39.54
atpE
ATP synthase CF1 epsilon subunit
4929675
Poptr_cp028
39.54
LOC112326534
uncharacterized LOC112326534
112326534
39.22
LOC112323922
U1 spliceosomal RNA
112323922
39.18
atpB
ATP synthase CF1 beta subunit
4929676
Poptr_cp029
38.38
LOC112323789
ribulose bisphosphate carboxylase large chain
112323789
38.33
psbL
photosystem II protein L
4929685
Poptr_cp038
38.15
LOC7496123
zeatin O-glucosyltransferase
7496123
POPTR_006G048200v3
38.01
ndhK
NADH dehydrogenase subunit K
4929671
Poptr_cp026
37.92
ndhE
NADH dehydrogenase subunit 4L
4929742
Poptr_cp081
37.88
rps18
ribosomal protein S18
4929694
Poptr_cp045
37.87
psaJ
photosystem I subunit IX
4929692
Poptr_cp043
37.84
LOC7468341
beta-carotene hydroxylase 2, chloroplastic
7468341
POPTR_004G074000v3
37.75
Poptr_cpR012
tRNA-Ser
4929656
Poptr_cpR012
37.68
LOC112328712
U1 spliceosomal RNA
112328712
37.59
ycf4
photosystem I assembly protein Ycf4
4929681
Poptr_cp034
37.46
LOC7463139
probable WRKY transcription factor 43
7463139
POPTR_015G099200v3
37.44
rbcL
ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
4929677
Poptr_cp030
37.36
rpoC2
RNA polymerase beta'' subunit
4929643
Poptr_cp010
37.26
LOC7493197
chalcone synthase 1
7493197
POPTR_003G176700v3
37.19
rpoC1
RNA polymerase beta' subunit
4929644
Poptr_cp011
37.14
ndhG
NADH dehydrogenase subunit 6
4929743
Poptr_cp082
37.09
psaA
photosystem I P700 chlorophyll a apoprotein A1
4929663
Poptr_cp022
36.99
ycf2
Ycf2
4929717
Poptr_cp066
36.96
petA
cytochrome f
4929683
Poptr_cp036
36.93
LOC112329051
small nucleolar RNA snoR143
112329051
36.88
psaB
photosystem I P700 chlorophyll a apoprotein A2
4929662
Poptr_cp021
36.74
LOC112323790
uncharacterized LOC112323790
112323790
36.63
ycf2
Ycf2
4929768
Poptr_cp098
36.60
LOC7471498
glucose and ribitol dehydrogenase
7471498
POPTR_008G149200v3
36.56
rps19
ribosomal protein S19
4929713
Poptr_cp063
36.49
LOC112323927
small nucleolar RNA snoR86
112323927
36.42
ycf3
photosystem I assembly protein Ycf3
4929664
Poptr_cp023
36.40
accD
acetyl-CoA carboxylase beta subunit
4929679
Poptr_cp032
36.32
psaC
photosystem I subunit VII
4929741
Poptr_cp080
36.23
LOC112323822
uncharacterized LOC112323822
112323822
POPTR_013G142000v3
35.89
rps19
ribosomal protein S19
4929772
Poptr_cp101
35.87
psaI
photosystem I subunit VIII
4929680
Poptr_cp033
35.67
ccsA
CcsA
4929739
Poptr_cp078
35.60
LOC112323823
DNA-directed RNA polymerase subunit beta-like
112323823
35.59
rpl2
ribosomal protein L2
4929714
Poptr_cp064
35.57
rpl2
ribosomal protein L2
4929771
Poptr_cp100
35.47
ndhI
NADH dehydrogenase subunit I
4929744
Poptr_cp083
35.46
ndhH
NADH dehydrogenase subunit 7
4929746
Poptr_cp085
35.31
rpl20
ribosomal protein L20
4929695
Poptr_cp046
35.25
petD
cytochrome b6/f complex subunit IV
4929704
Poptr_cp054
35.14
ndhC
NADH dehydrogenase subunit 3
4929672
Poptr_cp027
35.07
rpoA
RNA polymerase alpha subunit
4929705
Poptr_cp055
35.06
Poptr_cpR017
tRNA-Leu
4929668
Poptr_cpR017
34.97
rps4
ribosomal protein S4
4929666
Poptr_cp024
34.92
LOC7454691
malate synthase, glyoxysomal
7454691
POPTR_015G092000v3
34.76
rps14
ribosomal protein S14
4929661
Poptr_cp020
34.65
Poptr_cpR005
tRNA-Gly
4929636
Poptr_cpR005
34.59
ndhJ
NADH dehydrogenase subunit J
4929670
Poptr_cp025
34.47
rps3
ribosomal protein S3
4929711
Poptr_cp061
34.29
rpl16
ribosomal protein L16
4929710
Poptr_cp060
34.25
psbH
photosystem II protein H
4929702
Poptr_cp052
34.16
LOC112323884
NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic
112323884
POPTR_013G074800v3
33.92
rpoB
RNA polymerase beta subunit
4929645
Poptr_cp012
33.69
atpI
ATP synthase CF0 A subunit
4929641
Poptr_cp008
33.69
Upper 100 Genes
Symbol
Function*
Entrez Gene ID*
Other ID
PC
atpE
ATP synthase CF1 epsilon subunit
4929675
Poptr_cp028
47.11
LOC18109877
probable RNA-dependent RNA polymerase 1
18109877
POPTR_010G105200v3
44.10
atpB
ATP synthase CF1 beta subunit
4929676
Poptr_cp029
42.83
ndhB
NADH dehydrogenase subunit 2
4929721
Poptr_cp069
42.32
ndhH
NADH dehydrogenase subunit 7
4929746
Poptr_cp085
41.70
LOC112323789
ribulose bisphosphate carboxylase large chain
112323789
40.59
ndhB
NADH dehydrogenase subunit 2
4929763
Poptr_cp094
40.47
psbJ
photosystem II protein J
4929684
Poptr_cp037
40.41
clpP
ATP-dependent Clp protease proteolytic subunit
4929698
Poptr_cp048
40.40
rps12
ribosomal protein S12
4929696
Poptr_cp091
40.28
trnA
tRNA-Ala
4929755
Poptr_cpR040
40.28
psbE
photosystem II protein V
4929687
Poptr_cp040
40.25
rps7
ribosomal protein S7
4929762
Poptr_cp093
40.18
rps7
ribosomal protein S7
4929722
Poptr_cp070
40.10
psbL
photosystem II protein L
4929685
Poptr_cp038
39.73
LOC7463760
flavonoid 3'-monooxygenase
7463760
POPTR_018G051300v3
39.60
rpoA
RNA polymerase alpha subunit
4929705
Poptr_cp055
39.51
rbcL
ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
4929677
Poptr_cp030
39.23
trnA
tRNA-Ala
4929729
Poptr_cpR028
39.15
LOC112323790
uncharacterized LOC112323790
112323790
38.85
rps12
ribosomal protein S12
4929628
Poptr_cp071
38.68
Poptr_cp018
hypothetical protein
4929657
Poptr_cp018
38.67
psaB
photosystem I P700 chlorophyll a apoprotein A2
4929662
Poptr_cp021
38.59
Poptr_cpR027
tRNA-Ile
4929727
Poptr_cpR027
38.52
ndhK
NADH dehydrogenase subunit K
4929671
Poptr_cp026
38.44
ycf4
photosystem I assembly protein Ycf4
4929681
Poptr_cp034
38.39
psbF
photosystem II protein VI
4929686
Poptr_cp039
38.36
LOC7460537
cytochrome P450 78A5
7460537
POPTR_001G054800v3
38.22
Poptr_cpR012
tRNA-Ser
4929656
Poptr_cpR012
38.03
Poptr_cpR041
tRNA-Ile
4929756
Poptr_cpR041
37.64
rps2
ribosomal protein S2
4929642
Poptr_cp009
37.63
ycf3
photosystem I assembly protein Ycf3
4929664
Poptr_cp023
37.29
ndhA
NADH dehydrogenase subunit 1
4929745
Poptr_cp084
37.17
ndhI
NADH dehydrogenase subunit I
4929744
Poptr_cp083
37.15
rpl2
ribosomal protein L2
4929714
Poptr_cp064
37.07
LOC7476706
uncharacterized LOC7476706
7476706
POPTR_003G138700v3
37.04
trnK
tRNA-Lys
4929630
Poptr_cpR002
36.78
cemA
envelope membrane protein
4929682
Poptr_cp035
36.70
rpl33
ribosomal protein L33
4929693
Poptr_cp044
36.67
atpI
ATP synthase CF0 A subunit
4929641
Poptr_cp008
36.67
ndhJ
NADH dehydrogenase subunit J
4929670
Poptr_cp025
36.09
petN
cytochrome b6/f complex subunit VIII
4929647
Poptr_cp013
36.05
psbA
photosystem II protein D1
4929629
Poptr_cp001
36.01
rps18
ribosomal protein S18
4929694
Poptr_cp045
35.98
LOC7486494
probable LRR receptor-like serine/threonine-protein kinase At1g53440
7486494
POPTR_016G092700v3
35.97
LOC18100331
flavonoid 3'-monooxygenase
18100331
POPTR_006G141400v3
35.94
LOC7478346
flavonoid 3'-monooxygenase
7478346
POPTR_003G066600v3
35.73
LOC112323418
uncharacterized LOC112323418
112323418
35.60
petA
cytochrome f
4929683
Poptr_cp036
35.50
Poptr_cpR019
tRNA-Val
4929673
Poptr_cpR019
35.35
rpoC2
RNA polymerase beta'' subunit
4929643
Poptr_cp010
35.15
petD
cytochrome b6/f complex subunit IV
4929704
Poptr_cp054
34.92
ndhG
NADH dehydrogenase subunit 6
4929743
Poptr_cp082
34.85
rpoC1
RNA polymerase beta' subunit
4929644
Poptr_cp011
34.69
ndhE
NADH dehydrogenase subunit 4L
4929742
Poptr_cp081
34.55
psbD
photosystem II protein D2
4929654
Poptr_cp016
34.36
LOC7471660
flavonoid 3'-monooxygenase
7471660
POPTR_003G066800v3
34.34
psaI
photosystem I subunit VIII
4929680
Poptr_cp033
34.28
psaC
photosystem I subunit VII
4929741
Poptr_cp080
34.13
LOC112323823
DNA-directed RNA polymerase subunit beta-like
112323823
33.98
rpl20
ribosomal protein L20
4929695
Poptr_cp046
33.87
LOC7473878
protein DMP10
7473878
POPTR_013G027200v3
33.84
psaA
photosystem I P700 chlorophyll a apoprotein A1
4929663
Poptr_cp022
33.79
rps11
ribosomal protein S11
4929706
Poptr_cp056
33.74
rps4
ribosomal protein S4
4929666
Poptr_cp024
33.70
rpl16
ribosomal protein L16
4929710
Poptr_cp060
33.62
ndhD
NADH dehydrogenase subunit 4
4929740
Poptr_cp079
33.51
LOC7479080
kirola
7479080
POPTR_004G020100v3
33.47
ndhC
NADH dehydrogenase subunit 3
4929672
Poptr_cp027
33.44
ycf2
Ycf2
4929717
Poptr_cp066
33.22
LOC112323782
uncharacterized LOC112323782
112323782
33.18
rpl2
ribosomal protein L2
4929771
Poptr_cp100
33.15
rps3
ribosomal protein S3
4929711
Poptr_cp061
32.97
psaJ
photosystem I subunit IX
4929692
Poptr_cp043
32.64
rps19
ribosomal protein S19
4929713
Poptr_cp063
32.62
rpoB
RNA polymerase beta subunit
4929645
Poptr_cp012
32.56
accD
acetyl-CoA carboxylase beta subunit
4929679
Poptr_cp032
32.55
LOC7467972
thaumatin-like protein 1
7467972
POPTR_001G220900v3
32.37
LOC7473251
thioredoxin H-type 2
7473251
POPTR_008G194100v3
32.34
LOC7478347
cytochrome P450 71A1
7478347
POPTR_003G066400v3
32.21
LOC7484402
probable (S)-N-methylcoclaurine 3'-hydroxylase isozyme 2
7484402
POPTR_012G136600v3
32.12
LOC112323884
NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic
112323884
POPTR_013G074800v3
32.07
LOC112326158
O-acyltransferase WSD1-like
112326158
POPTR_T170200v3
32.05
LOC18108208
uncharacterized LOC18108208
18108208
POPTR_019G027000v3
31.96
LOC7461263
MLP-like protein 28
7461263
POPTR_017G051100v3
31.94
LOC7467040
cytochrome P450 78A9
7467040
POPTR_001G083900v3
31.89
LOC7455247
O-acyltransferase WSD1
7455247
POPTR_019G071000v3
31.89
LOC7479535
myb family transcription factor PHL5
7479535
POPTR_006G191000v3
31.78
LOC7465614
benzyl alcohol O-benzoyltransferase
7465614
POPTR_013G074500v3
31.75
rps14
ribosomal protein S14
4929661
Poptr_cp020
31.72
LOC7491320
monothiol glutaredoxin-S9
7491320
POPTR_014G134300v3
31.63
psbC
photosystem II 44 kDa protein
4929655
Poptr_cp017
31.57
LOC7458209
aluminum-activated malate transporter 9
7458209
POPTR_003G134100v3
31.48
LOC18105360
ATP synthase subunit a
18105360
POPTR_014G168000v3
31.41
Poptr_cpR017
tRNA-Leu
4929668
Poptr_cpR017
31.31
rps19
ribosomal protein S19
4929772
Poptr_cp101
31.22
Poptr_cp087
Ycf1
4929748
Poptr_cp087
31.09
Poptr_cpR005
tRNA-Gly
4929636
Poptr_cpR005
31.02
LOC18109378
heavy metal-associated isoprenylated plant protein 30
18109378
POPTR_011G149500v3
30.63
LOC18102584
uncharacterized LOC18102584
18102584
30.46
Upper 100 Genes
Symbol
Function*
Entrez Gene ID*
Other ID
PC
LOC7488343
lysine histidine transporter-like 6
7488343
POPTR_008G118000v3
41.00
LOC18105022
cytochrome P450 734A1
18105022
POPTR_014G043000v3
39.04
LOC7487693
AT-hook motif nuclear-localized protein 19
7487693
POPTR_013G044500v3
38.26
LOC7491394
benzyl alcohol O-benzoyltransferase
7491394
POPTR_001G447500v3
35.40
LOC7463180
nitrate reductase [NADH]
7463180
POPTR_002G088600v3
33.06
LOC7486630
probable 2-oxoglutarate-dependent dioxygenase AOP1
7486630
POPTR_001G176100v3
32.47
LOC7482262
putative beta-D-xylosidase
7482262
POPTR_010G141400v3
31.93
LOC7489277
aquaporin TIP1-3
7489277
POPTR_009G027200v3
31.47
LOC18095988
benzyl alcohol O-benzoyltransferase
18095988
POPTR_001G447400v3
30.89
LOC7474971
lysine histidine transporter-like 8
7474971
POPTR_009G140800v3
30.88
LOC7487272
tropinone reductase homolog
7487272
POPTR_006G089800v3
30.70
LOC7486629
probable 2-oxoglutarate-dependent dioxygenase AOP1
7486629
POPTR_001G176000v3
29.34
LOC18097400
beta-glucosidase 46
18097400
POPTR_004G019300v3
28.82
LOC18098406
hexose carrier protein HEX6
18098406
POPTR_004G233500v3
28.75
LOC7465813
AT-hook motif nuclear-localized protein 24
7465813
POPTR_003G116900v3
28.59
LOC18104536
trans-resveratrol di-O-methyltransferase
18104536
POPTR_013G120800v3
28.40
LOC18105965
uncharacterized LOC18105965
18105965
POPTR_015G119800v3
28.27
LOC18105079
uclacyanin-3
18105079
POPTR_014G049600v3
28.25
LOC18095430
probable LRR receptor-like serine/threonine-protein kinase At1g53430
18095430
POPTR_001G385400v3
27.45
LOC7457170
probable terpene synthase 6
7457170
POPTR_007G074400v3
27.37
LOC18099625
abscisic stress-ripening protein 3
18099625
POPTR_005G193600v3
27.14
LOC112324789
berberine bridge enzyme-like 8
112324789
POPTR_001G462400v3
26.93
LOC7492425
AT-hook motif nuclear-localized protein 20
7492425
POPTR_010G074200v3
26.85
LOC18110359
GDSL esterase/lipase At1g29670
18110359
POPTR_018G089200v3
26.53
LOC7470729
oleosin 16 kDa
7470729
POPTR_006G234900v3
26.47
LOC7473446
auxin-responsive protein IAA14
7473446
POPTR_008G161200v3
26.30
LOC7484879
(-)-isopiperitenol/(-)-carveol dehydrogenase, mitochondrial
7484879
POPTR_012G105700v3
25.99
LOC7492393
galactinol synthase 1
7492393
POPTR_010G042000v3
25.97
LOC7475953
flowering-promoting factor 1-like protein 3
7475953
POPTR_010G024500v3
25.97
LOC7497422
laccase-3
7497422
POPTR_013G152700v3
25.97
LOC7495294
alpha-farnesene synthase
7495294
POPTR_011G031800v3
25.97
LOC7482889
MLP-like protein 43
7482889
POPTR_008G131100v3
25.75
LOC18109540
alcohol dehydrogenase
18109540
POPTR_005G060200v3
25.66
LOC7468487
probable pectinesterase/pectinesterase inhibitor 35
7468487
POPTR_014G149700v3
25.60
LOC7485665
AT-hook motif nuclear-localized protein 25
7485665
POPTR_005G257200v3
25.05
LOC7489432
GDSL esterase/lipase At1g29670
7489432
POPTR_018G089400v3
25.00
LOC7496783
asparagine synthetase [glutamine-hydrolyzing] 1
7496783
POPTR_001G278400v3
24.80
LOC18108496
probable O-methyltransferase 3
18108496
POPTR_019G093000v3
24.78
LOC7461571
GDSL esterase/lipase At1g29660
7461571
POPTR_018G088600v3
24.71
LOC112324786
berberine bridge enzyme-like 8
112324786
POPTR_001G462200v3
24.47
LOC7469672
transcription factor bHLH18
7469672
POPTR_009G081400v3
24.43
LOC7478600
wall-associated receptor kinase 2
7478600
POPTR_009G154100v3
24.35
LOC7462495
phosphomethylethanolamine N-methyltransferase
7462495
POPTR_015G039000v3
24.05
LOC7465228
galactinol synthase 2
7465228
POPTR_013G005900v3
23.98
LOC7457941
ABC transporter C family member 14
7457941
POPTR_014G130500v3
23.44
LOC18105808
probable WRKY transcription factor 72
18105808
POPTR_015G064100v3
23.26
LOC7457789
probable galactinol--sucrose galactosyltransferase 2
7457789
POPTR_015G086400v3
23.16
LOC7456253
omega-hydroxypalmitate O-feruloyl transferase
7456253
POPTR_001G326300v3
22.83
LOC7458573
cysteine-rich receptor-like protein kinase 10
7458573
POPTR_004G024100v3
22.81
LOC7473898
cationic amino acid transporter 1
7473898
POPTR_013G030900v3
22.77
LOC7491869
ABC transporter B family member 2
7491869
POPTR_003G094400v3
22.76
LOC18099678
jacalin-related lectin 3
18099678
POPTR_005G232400v3
22.66
LOC7459521
glycine-rich protein 5
7459521
POPTR_002G252400v3
22.56
LOC18110643
probable LRR receptor-like serine/threonine-protein kinase At1g53440
18110643
POPTR_016G011200v3
22.54
LOC18094155
transcription factor bHLH71
18094155
POPTR_001G141100v3
22.54
LOC112329051
small nucleolar RNA snoR143
112329051
22.52
LOC7478659
protein NLP1
7478659
POPTR_001G293300v3
22.52
LOC7463780
uncharacterized LOC7463780
7463780
POPTR_018G046500v3
22.50
LOC7483951
tetraketide alpha-pyrone reductase 2
7483951
POPTR_008G120200v3
22.48
LOC18097308
miraculin
18097308
POPTR_004G000400v3
22.47
LOC7493262
putative UPF0481 protein At3g02645
7493262
POPTR_003G206500v3
22.43
LOC7474394
fatty alcohol:caffeoyl-CoA acyltransferase
7474394
POPTR_010G180000v3
22.03
LOC7489112
cannabidiolic acid synthase-like 1
7489112
POPTR_011G158100v3
21.98
LOC7465539
protein DETOXIFICATION 27
7465539
POPTR_007G010200v3
21.86
LOC7454973
laccase-7
7454973
POPTR_006G094100v3
21.84
LOC7482890
MLP-like protein 328
7482890
POPTR_008G131200v3
21.77
LOC7490956
metallothiol transferase FosB
7490956
POPTR_001G171600v3
21.76
LOC7487465
lactosylceramide 4-alpha-galactosyltransferase
7487465
POPTR_016G114200v3
21.71
LOC18096030
berberine bridge enzyme-like 8
18096030
POPTR_001G462300v3
21.67
LOC7460508
pleiotropic drug resistance protein 1
7460508
POPTR_001G048900v3
21.55
LOC18102541
U-box domain-containing protein 21
18102541
POPTR_010G103100v3
21.49
LOC7474049
uncharacterized LOC7474049
7474049
POPTR_015G144800v3
21.42
LOC7494429
beta-amyrin 28-oxidase
7494429
POPTR_013G106200v3
21.38
LOC7491938
uncharacterized LOC7491938
7491938
21.26
LOC7480605
allene oxide synthase 3
7480605
POPTR_004G149000v3
21.11
LOC18103511
berberine bridge enzyme-like 28
18103511
POPTR_011G162800v3
21.08
LOC18095476
pathogen-related protein
18095476
POPTR_001G389800v3
21.05
LOC7494330
major pollen allergen Bet v 1-D/H
7494330
POPTR_004G033000v3
20.99
LOC18099862
3,9-dihydroxypterocarpan 6A-monooxygenase
18099862
POPTR_006G057900v3
20.97
LOC7457786
cytochrome P450 71A1
7457786
POPTR_015G086000v3
20.96
LOC18110360
GDSL esterase/lipase At5g45670
18110360
POPTR_018G089300v3
20.80
LOC7485051
alpha-amylase/subtilisin inhibitor
7485051
POPTR_007G111600v3
20.74
LOC7481640
CASP-like protein 1D1
7481640
POPTR_008G205000v3
20.71
LOC18100146
transcription factor RAX2
18100146
POPTR_006G123400v3
20.68
LOC7461568
GDSL esterase/lipase At1g29670
7461568
POPTR_018G088500v3
20.62
LOC7460537
cytochrome P450 78A5
7460537
POPTR_001G054800v3
20.43
LOC7478098
AT-hook motif nuclear-localized protein 26
7478098
POPTR_001G115200v3
20.39
LOC7462863
C2 domain-containing protein At1g63220
7462863
POPTR_002G123200v3
20.34
LOC18107663
inositol oxygenase 2
18107663
POPTR_018G069700v3
20.33
LOC7462444
crocetin glucosyltransferase, chloroplastic
7462444
POPTR_002G236400v3
20.25
LOC7456243
truncated transcription factor CAULIFLOWER A
7456243
POPTR_001G328400v3
20.21
LOC7461370
phytoene synthase 2, chloroplastic
7461370
POPTR_003G218000v3
20.15
LOC7467241
branched-chain-amino-acid aminotransferase 2, chloroplastic
7467241
POPTR_002G113600v3
20.09
LOC112328218
extensin-2-like
112328218
POPTR_001G020000v3
19.96
LOC7489115
berberine bridge enzyme-like 21
7489115
POPTR_011G158500v3
19.94
LOC7469204
pathogen-related protein
7469204
POPTR_005G188400v3
19.90
LOC7495233
COBRA-like protein 7
7495233
POPTR_014G125300v3
19.88
LOC7467535
AT-hook motif nuclear-localized protein 20
7467535
POPTR_008G164500v3
19.86
LOC7494515
protein DJ-1 homolog D
7494515
POPTR_004G076000v3
19.86
LOC18095390
transcription factor TCP4
18095390
POPTR_001G375800v3
19.82
Upper 100 Genes
Symbol
Function*
Entrez Gene ID*
Other ID
PC
LOC7467387
18.1 kDa class I heat shock protein
7467387
POPTR_009G049900v3
29.85
LOC18097975
18.1 kDa class I heat shock protein
18097975
29.64
LOC7478626
18.1 kDa class I heat shock protein
7478626
POPTR_009G148000v3
28.25
LOC7479202
23.6 kDa heat shock protein, mitochondrial
7479202
POPTR_003G109200v3
27.46
LOC18106465
heat shock protein 83
18106465
POPTR_017G146600v3
25.39
LOC18094241
heat shock 70 kDa protein
18094241
POPTR_001G042600v3
25.18
LOC7489736
mitogen-activated protein kinase kinase kinase 17
7489736
POPTR_005G139300v3
25.08
LOC7473268
luminal-binding protein 4
7473268
POPTR_013G018000v3
24.36
LOC112323309
probable glutathione S-transferase parC
112323309
POPTR_011G113400v3
24.29
LOC7476266
multiprotein-bridging factor 1c
7476266
POPTR_018G075200v3
23.18
LOC7481611
18.1 kDa class I heat shock protein
7481611
POPTR_010G175200v3
23.02
LOC7471654
phospholipase A1-Ibeta2, chloroplastic
7471654
POPTR_003G081500v3
22.43
LOC7465011
monooxygenase 2
7465011
POPTR_001G307500v3
22.38
LOC112323310
probable glutathione S-transferase parC
112323310
POPTR_011G114000v3
22.31
LOC7482152
ethylene-responsive transcription factor ERF025
7482152
POPTR_012G134000v3
22.30
LOC7488987
probable xyloglucan endotransglucosylase/hydrolase protein 23
7488987
POPTR_018G095100v3
22.29
LOC7482117
dehydration-responsive element-binding protein 1A
7482117
POPTR_012G134100v3
22.25
LOC7483109
mitogen-activated protein kinase kinase kinase 18
7483109
POPTR_007G044800v3
21.75
LOC7461592
probable xyloglucan endotransglucosylase/hydrolase protein 23
7461592
POPTR_018G095200v3
21.67
LOC7458152
probable mediator of RNA polymerase II transcription subunit 37c
7458152
POPTR_010G206600v3
21.49
LOC18109033
18.1 kDa class I heat shock protein
18109033
21.38
LOC7496429
small heat shock protein, chloroplastic
7496429
POPTR_012G022400v3
21.16
LOC18109968
probable glutathione S-transferase parC
18109968
POPTR_013G137200v3
21.09
LOC7460940
protein FAM32A-like
7460940
POPTR_005G174400v3
20.75
LOC18095192
scopoletin glucosyltransferase
18095192
POPTR_001G303000v3
20.68
LOC18110133
17.5 kDa class I heat shock protein
18110133
POPTR_009G039200v3
20.34
LOC7497047
protein TIFY 5A
7497047
POPTR_011G083900v3
20.29
LOC18100610
E3 ubiquitin-protein ligase PUB22
18100610
POPTR_006G202600v3
20.19
LOC7482481
probable calcium-binding protein CML45
7482481
POPTR_017G084800v3
19.96
LOC18097977
18.1 kDa class I heat shock protein
18097977
POPTR_004G187200v3
19.93
LOC7494528
heat shock protein 83
7494528
POPTR_004G073600v3
19.56
LOC7474533
calcium-binding protein CML37
7474533
POPTR_002G001400v3
19.20
LOC18104942
transcription factor MYB77
18104942
POPTR_014G035100v3
19.07
LOC7476686
ethylene-responsive transcription factor ERF017
7476686
POPTR_018G047300v3
18.80
LOC7464633
xyloglucan endotransglucosylase/hydrolase 2
7464633
POPTR_005G201200v3
18.64
LOC7490035
ethylene-responsive transcription factor ERF109
7490035
POPTR_009G101900v3
18.51
LOC7492280
ethylene-responsive transcription factor ERF017
7492280
POPTR_006G218200v3
18.40
LOC18102191
18.1 kDa class I heat shock protein
18102191
POPTR_009G147900v3
18.07
LOC112325022
cytochrome P450 CYP73A100-like
112325022
POPTR_018G146100v3
17.95
LOC18094242
heat shock 70 kDa protein
18094242
POPTR_001G042700v3
17.91
LOC7460976
probable receptor-like protein kinase At1g11050
7460976
POPTR_005G181800v3
17.82
LOC7494393
22.0 kDa class IV heat shock protein
7494393
POPTR_013G089200v3
17.81
LOC7467388
17.3 kDa class I heat shock protein
7467388
POPTR_009G049800v3
17.72
LOC18105079
uclacyanin-3
18105079
POPTR_014G049600v3
17.71
LOC18097788
ethylene-responsive transcription factor ERF109
18097788
POPTR_004G141200v3
17.48
LOC7484748
ABC transporter A family member 2
7484748
POPTR_012G069800v3
17.06
LOC18098378
TMV resistance protein N
18098378
POPTR_004G230000v3
16.99
LOC18098202
ubiquitin-like protein 5
18098202
POPTR_004G211600v3
16.90
LOC18108603
protein TIC 20-IV, chloroplastic
18108603
POPTR_019G105200v3
16.78
LOC18100302
ethylene-responsive transcription factor ERF017
18100302
POPTR_006G138700v3
16.77
LOC7465130
zinc finger protein ZAT12
7465130
POPTR_001G235800v3
16.76
LOC18109144
xyloglucan endotransglucosylase/hydrolase protein 15
18109144
POPTR_T180200v3
16.76
LOC18095065
18.2 kDa class I heat shock protein
18095065
POPTR_001G254700v3
16.67
LOC7471619
small heat shock protein, chloroplastic
7471619
POPTR_003G076000v3
16.58
LOC18109505
uncharacterized LOC18109505
18109505
16.55
LOC7467676
class I heat shock protein
7467676
POPTR_T125900v3
16.49
LOC7489735
mitogen-activated protein kinase kinase kinase 17
7489735
POPTR_005G139200v3
16.42
LOC7457547
scopoletin glucosyltransferase
7457547
POPTR_009G098400v3
16.28
LOC7463042
probable calcium-binding protein CML45
7463042
POPTR_004G122900v3
16.27
LOC18102104
scopoletin glucosyltransferase
18102104
16.17
LOC7478884
probable xyloglucan endotransglucosylase/hydrolase protein 23
7478884
POPTR_013G005700v3
16.14
LOC112326599
uncharacterized LOC112326599
112326599
16.13
LOC18105997
heat shock cognate protein 80
18105997
POPTR_016G003400v3
16.11
LOC112328902
CASP-like protein 4D1
112328902
POPTR_010G204700v3
16.10
LOC18102541
U-box domain-containing protein 21
18102541
POPTR_010G103100v3
16.01
LOC7473428
1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 1
7473428
POPTR_008G157400v3
15.97
LOC7492050
scopoletin glucosyltransferase
7492050
POPTR_001G303600v3
15.85
LOC7491951
exocyst complex component EXO70H1
7491951
POPTR_006G214300v3
15.71
LOC7469201
stearoyl-[acyl-carrier-protein] 9-desaturase 6, chloroplastic
7469201
POPTR_005G187600v3
15.68
LOC7488136
zinc finger protein ZAT12
7488136
POPTR_009G027700v3
15.58
LOC7480455
dirigent protein 11
7480455
POPTR_005G100700v3
15.58
LOC7458129
ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
7458129
POPTR_010G200500v3
15.57
LOC7469820
heat shock cognate 70 kDa protein 2
7469820
POPTR_008G054000v3
15.56
LOC7473239
probable galacturonosyltransferase-like 9
7473239
POPTR_008G192600v3
15.53
LOC18105602
U-box domain-containing protein 21
18105602
POPTR_015G031000v3
15.53
LOC7485450
polyphenol oxidase, chloroplastic
7485450
POPTR_011G047300v3
15.52
LOC7458849
calcium-binding protein PBP1
7458849
POPTR_019G120600v3
15.52
LOC7455409
galactinol synthase 1
7455409
POPTR_014G116800v3
15.52
LOC112325220
protein TIC 20-IV, chloroplastic-like
112325220
POPTR_019G108800v3
15.50
LOC18108483
laccase-14
18108483
POPTR_019G088600v3
15.50
LOC7488405
10 kDa chaperonin, mitochondrial
7488405
POPTR_008G130500v3
15.47
LOC7489277
aquaporin TIP1-3
7489277
POPTR_009G027200v3
15.39
LOC18103249
calcyclin-binding protein
18103249
POPTR_011G085100v3
15.38
LOC7497418
calcium-binding protein PBP1
7497418
POPTR_013G151000v3
15.38
LOC18105148
uncharacterized LOC18105148
18105148
15.34
LOC7476868
calcium-transporting ATPase 12, plasma membrane-type
7476868
POPTR_005G215600v3
15.32
LOC7460261
cytosolic sulfotransferase 15
7460261
POPTR_003G193500v3
15.32
LOC7468486
peptidyl-prolyl cis-trans isomerase FKBP62
7468486
POPTR_014G149400v3
15.25
LOC7462237
17.9 kDa class II heat shock protein
7462237
POPTR_006G223900v3
15.24
LOC7460408
probable WRKY transcription factor 33
7460408
POPTR_016G128300v3
15.19
LOC18109174
dirigent protein 11
18109174
POPTR_T173200v3
15.17
LOC18094575
phospholipase A1-Ibeta2, chloroplastic
18094575
POPTR_001G153100v3
15.13
LOC7460943
ethylene-responsive transcription factor ERF014
7460943
POPTR_005G176000v3
15.12
LOC7492436
transcription factor bHLH92
7492436
POPTR_010G077000v3
15.10
LOC112326123
dnaJ protein ERDJ3B-like
112326123
POPTR_T165400v3
15.06
LOC7467451
laccase-14
7467451
POPTR_019G088700v3
15.06
LOC7465161
expansin-A8
7465161
POPTR_013G154700v3
15.04
LOC18107209
peroxidase 55
18107209
POPTR_017G064100v3
14.92
LOC18096973
uncharacterized LOC18096973
18096973
POPTR_003G092100v3
14.86
LOC7466408
U-box domain-containing protein 29
7466408
POPTR_002G070500v3
14.85
Upper 100 Genes
Symbol
Function*
Entrez Gene ID*
Other ID
PC
LOC7485458
crocetin glucosyltransferase, chloroplastic
7485458
POPTR_006G055600v3
28.82
LOC7468057
probable 2-oxoglutarate-dependent dioxygenase At5g05600
7468057
POPTR_006G101100v3
27.43
LOC18099771
protein PYRICULARIA ORYZAE RESISTANCE 21
18099771
POPTR_006G019800v3
27.42
LOC18100426
bark storage protein A
18100426
POPTR_T096300v3
26.39
LOC7479600
heavy metal-associated isoprenylated plant protein 2
7479600
POPTR_006G020000v3
25.26
LOC7474945
cytochrome P450 94C1
7474945
POPTR_009G145400v3
24.73
LOC7496542
protein TIFY 9
7496542
POPTR_003G165000v3
24.64
LOC18094704
protein TIFY 10A
18094704
POPTR_001G166200v3
24.59
LOC7488765
protein LURP-one-related 15
7488765
POPTR_016G130700v3
24.58
LOC18108499
endochitinase EP3
18108499
POPTR_019G093900v3
23.96
LOC18101882
major allergen Pru ar 1
18101882
POPTR_008G212300v3
23.37
LOC7453765
carbonic anhydrase 2
7453765
POPTR_015G076000v3
22.46
LOC7475024
uncharacterized LOC7475024
7475024
POPTR_009G070200v3
22.45
LOC7485533
tryptophan synthase beta chain 1
7485533
POPTR_011G024900v3
22.44
LOC7476916
transcription factor MYB14
7476916
POPTR_005G224100v3
22.19
LOC7469347
heavy metal-associated isoprenylated plant protein 47
7469347
POPTR_014G171300v3
22.03
LOC7464613
laccase-12
7464613
POPTR_010G183500v3
21.94
LOC7483928
leucoanthocyanidin reductase
7483928
POPTR_008G116500v3
21.39
LOC7487348
uncharacterized LOC7487348
7487348
POPTR_006G105600v3
21.28
LOC7491592
steroid 5-alpha-reductase DET2
7491592
POPTR_010G245200v3
21.09
LOC18100012
uncharacterized LOC18100012
18100012
POPTR_006G105500v3
21.03
LOC7474724
blue copper protein
7474724
POPTR_006G067300v3
20.96
LOC7455410
transcription factor MYB108
7455410
POPTR_014G117000v3
20.67
LOC7472498
probable calcium-binding protein CML43
7472498
POPTR_016G142000v3
20.66
LOC7497047
protein TIFY 5A
7497047
POPTR_011G083900v3
20.65
LOC18109326
acidic endochitinase WIN6.2B-like
18109326
POPTR_T175300v3
20.54
LOC112328250
LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.8
112328250
POPTR_007G141400v3
20.34
LOC7485485
probable xyloglucan endotransglucosylase/hydrolase protein 23
7485485
POPTR_006G071200v3
20.33
LOC7486336
cytochrome P450 78A7
7486336
POPTR_005G084500v3
20.26
LOC18106165
glucan endo-1,3-beta-glucosidase, basic isoform
18106165
POPTR_016G057400v3
20.06
LOC18105371
heavy metal-associated isoprenylated plant protein 16
18105371
POPTR_014G171500v3
20.01
LOC7492242
NAC domain-containing protein 90
7492242
POPTR_006G209200v3
19.86
LOC7453729
UDP-glycosyltransferase 82A1
7453729
POPTR_016G019400v3
19.85
LOC7456842
uncharacterized LOC7456842
7456842
POPTR_004G095200v3
19.76
LOC7465099
abscisic acid 8'-hydroxylase 2
7465099
POPTR_001G242600v3
19.72
LOC7459061
MLP-like protein 423
7459061
POPTR_010G096000v3
19.67
LOC7486082
endogenous alpha-amylase/subtilisin inhibitor
7486082
POPTR_007G111800v3
19.63
LOC7474964
acidic endochitinase WIN6-like
7474964
19.59
LOC7480140
salicylate carboxymethyltransferase
7480140
POPTR_007G021300v3
19.50
LOC18099774
protein PYRICULARIA ORYZAE RESISTANCE 21
18099774
POPTR_006G020100v3
19.31
LOC7469630
zinc finger protein ZAT10
7469630
POPTR_009G089400v3
19.25
LOC7490918
dehydration-responsive element-binding protein 1E
7490918
POPTR_001G110700v3
19.05
LOC7472714
probable WRKY transcription factor 41
7472714
POPTR_001G092900v3
18.97
LOC7466874
lipase-like PAD4
7466874
POPTR_005G068700v3
18.94
LOC18097932
uncharacterized LOC18097932
18097932
POPTR_T020000v3
18.94
LOC7455199
linamarin synthase 2
7455199
POPTR_005G073800v3
18.94
LOC7486851
protein ZINC INDUCED FACILITATOR-LIKE 1
7486851
POPTR_008G010600v3
18.88
LOC18104880
uncharacterized LOC18104880
18104880
POPTR_014G027800v3
18.83
LOC7493198
chalcone synthase 1
7493198
POPTR_003G176800v3
18.79
LOC7472358
9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic
7472358
POPTR_011G112400v3
18.75
LOC7494801
very-long-chain 3-oxoacyl-CoA reductase-like protein At1g24470
7494801
POPTR_008G181600v3
18.74
LOC7458264
cytochrome b561 and DOMON domain-containing protein At5g35735
7458264
POPTR_002G222700v3
18.63
LOC7487673
pathogenesis-related protein PR-4
7487673
POPTR_013G041700v3
18.62
LOC18099243
AAA-ATPase At1g43910
18099243
POPTR_005G119200v3
18.56
LOC7478075
dehydration-responsive element-binding protein 1E
7478075
POPTR_001G110800v3
18.55
LOC18102943
(3S,6E)-nerolidol synthase 1
18102943
POPTR_011G032300v3
18.52
LOC18099144
probable aquaporin PIP2-8
18099144
POPTR_005G109200v3
18.52
LOC7463394
protein ECERIFERUM 1
7463394
POPTR_014G180300v3
18.50
LOC7454262
cytochrome P450 81E8
7454262
POPTR_008G205200v3
18.46
LOC7479547
class V chitinase
7479547
POPTR_006G188300v3
18.39
LOC7486795
homeobox-leucine zipper protein ATHB-7
7486795
POPTR_014G103000v3
18.25
LOC18100610
E3 ubiquitin-protein ligase PUB22
18100610
POPTR_006G202600v3
18.18
LOC7487324
probable 2-oxoglutarate-dependent dioxygenase At5g05600
7487324
POPTR_006G101200v3
18.01
LOC18109174
dirigent protein 11
18109174
POPTR_T173200v3
17.82
LOC7496928
probable isoaspartyl peptidase/L-asparaginase 2
7496928
POPTR_014G022900v3
17.80
LOC7492436
transcription factor bHLH92
7492436
POPTR_010G077000v3
17.77
LOC7475677
protein TIFY 10b
7475677
POPTR_003G068900v3
17.76
LOC7480438
uncharacterized protein At1g24485
7480438
POPTR_005G043700v3
17.76
LOC18104618
transcription factor bHLH162
18104618
POPTR_013G129800v3
17.74
LOC7496976
cytochrome P450 86A8
7496976
POPTR_014G085800v3
17.73
LOC7480455
dirigent protein 11
7480455
POPTR_005G100700v3
17.66
LOC18096340
cucumber peeling cupredoxin
18096340
POPTR_002G150600v3
17.66
LOC7467474
endochitinase PR4
7467474
POPTR_019G093800v3
17.62
LOC7475643
protein SAR DEFICIENT 1
7475643
POPTR_015G045300v3
17.60
LOC18094037
nudix hydrolase 2
18094037
POPTR_001G127700v3
17.60
LOC7460261
cytosolic sulfotransferase 15
7460261
POPTR_003G193500v3
17.58
LOC18094938
thaumatin-like protein 1
18094938
POPTR_001G221800v3
17.58
LOC7496089
putative methyltransferase DDB_G0268948
7496089
POPTR_006G042200v3
17.56
LOC18094937
thaumatin-like protein 1
18094937
POPTR_001G221900v3
17.53
LOC7475604
probable protein phosphatase 2C 51
7475604
POPTR_T137100v3
17.46
LOC7458849
calcium-binding protein PBP1
7458849
POPTR_019G120600v3
17.38
LOC7463786
protein IQ-DOMAIN 1
7463786
POPTR_011G096500v3
17.37
LOC7493197
chalcone synthase 1
7493197
POPTR_003G176700v3
17.29
LOC112325255
uncharacterized LOC112325255
112325255
17.26
LOC18104080
pathogenesis-related protein PR-4
18104080
POPTR_013G041900v3
17.25
LOC7477665
cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1
7477665
POPTR_005G237600v3
17.24
LOC7475030
flavonoid 3',5'-hydroxylase 1
7475030
POPTR_009G069100v3
17.14
LOC7453762
transcription factor bHLH162
7453762
POPTR_015G074500v3
17.14
LOC112324315
probable protein phosphatase 2C 51
112324315
POPTR_015G018800v3
17.08
LOC7455741
transmembrane protein 45B
7455741
POPTR_001G008900v3
17.07
LOC7460419
protein LURP-one-related 15
7460419
POPTR_016G131400v3
16.89
LOC7463591
transmembrane protein 45B
7463591
POPTR_003G216600v3
16.86
LOC18099769
protein PYRICULARIA ORYZAE RESISTANCE 21
18099769
POPTR_006G019500v3
16.84
LOC7453982
trehalose-phosphate phosphatase A
7453982
POPTR_012G126100v3
16.72
LOC7462100
laccase-12
7462100
POPTR_008G073700v3
16.69
LOC18098085
F-box protein At2g27310
18098085
POPTR_004G199300v3
16.68
LOC18104574
cytochrome P450 82G1
18104574
POPTR_013G125300v3
16.66
LOC18111206
probable WRKY transcription factor 31
18111206
POPTR_011G007800v3
16.54
LOC7485216
probable WRKY transcription factor 30
7485216
POPTR_012G031700v3
16.54
LOC7465052
probable indole-3-acetic acid-amido synthetase GH3.1
7465052
POPTR_001G298300v3
16.52
Upper 100 Genes
Symbol
Function*
Entrez Gene ID*
Other ID
PC
LOC7472135
chaperone protein dnaJ 11, chloroplastic
7472135
POPTR_009G131800v3
33.14
LOC7465161
expansin-A8
7465161
POPTR_013G154700v3
27.84
LOC18100191
uncharacterized LOC18100191
18100191
POPTR_006G127900v3
25.95
LOC7485277
WAT1-related protein At4g30420
7485277
POPTR_006G177700v3
24.48
LOC7477401
uncharacterized LOC7477401
7477401
POPTR_004G044300v3
23.23
LOC7484381
low-temperature-induced 65 kDa protein
7484381
POPTR_012G141300v3
22.10
LOC7460859
dynein light chain 2, cytoplasmic
7460859
POPTR_011G126400v3
21.87
LOC7493257
DNA damage-repair/toleration protein DRT100
7493257
POPTR_003G207000v3
21.80
LOC7458168
acid beta-fructofuranosidase 2, vacuolar
7458168
POPTR_003G126300v3
21.42
LOC18109673
myb family transcription factor PHL5
18109673
POPTR_016G048000v3
21.38
LOC7483567
dormancy-associated protein homolog 4
7483567
POPTR_003G070500v3
21.19
LOC18105645
G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080
18105645
POPTR_015G026300v3
21.13
LOC7465099
abscisic acid 8'-hydroxylase 2
7465099
POPTR_001G242600v3
20.96
LOC112324786
berberine bridge enzyme-like 8
112324786
POPTR_001G462200v3
20.92
LOC7483980
18 kDa seed maturation protein
7483980
POPTR_016G046400v3
20.84
LOC7482262
putative beta-D-xylosidase
7482262
POPTR_010G141400v3
20.82
LOC7490642
chaperone protein dnaJ 11, chloroplastic
7490642
POPTR_002G020700v3
20.56
LOC18103031
uncharacterized LOC18103031
18103031
POPTR_011G053300v3
20.29
LOC7470449
uncharacterized LOC7470449
7470449
POPTR_004G184700v3
20.00
LOC18096313
J domain-containing protein required for chloroplast accumulation response 1
18096313
POPTR_002G134300v3
19.52
LOC7464039
organ-specific protein S2
7464039
POPTR_009G114700v3
19.46
LOC7475591
uncharacterized LOC7475591
7475591
POPTR_010G124700v3
19.38
LOC7465524
probable trehalose-phosphate phosphatase F
7465524
POPTR_003G112400v3
19.33
LOC7462135
uncharacterized LOC7462135
7462135
POPTR_008G081000v3
19.08
LOC18106132
11 kDa late embryogenesis abundant protein
18106132
POPTR_T111300v3
19.07
LOC7453636
chaperone protein dnaJ 11, chloroplastic
7453636
POPTR_004G172300v3
19.03
LOC7470587
GDSL esterase/lipase APG
7470587
POPTR_001G191400v3
19.01
LOC7488985
xyloglucan endotransglucosylase/hydrolase protein 24
7488985
POPTR_018G094900v3
18.99
LOC7479211
protein NRT1/ PTR FAMILY 6.3
7479211
POPTR_003G111500v3
18.82
LOC7489155
early nodulin-like protein 1
7489155
POPTR_006G264600v3
18.78
LOC18094096
phosphoribulokinase, chloroplastic
18094096
POPTR_001G134000v3
18.76
LOC18095622
NAC domain-containing protein 72
18095622
POPTR_001G404100v3
18.71
LOC7488158
uncharacterized LOC7488158
7488158
POPTR_009G024500v3
18.67
LOC7468341
beta-carotene hydroxylase 2, chloroplastic
7468341
POPTR_004G074000v3
18.49
LOC7489277
aquaporin TIP1-3
7489277
POPTR_009G027200v3
18.31
LOC18094569
pelargonidin 3-O-(6-caffeoylglucoside) 5-O-(6-O-malonylglucoside) 4'''-malonyltransferase
18094569
POPTR_001G152500v3
18.19
LOC7462607
protein RALF-like 34
7462607
POPTR_007G044700v3
18.16
LOC18107663
inositol oxygenase 2
18107663
POPTR_018G069700v3
18.05
LOC7458131
glycerol-3-phosphate acyltransferase 5
7458131
POPTR_010G201200v3
18.02
LOC7473446
auxin-responsive protein IAA14
7473446
POPTR_008G161200v3
17.96
LOC7474964
acidic endochitinase WIN6-like
7474964
17.94
LOC7475024
uncharacterized LOC7475024
7475024
POPTR_009G070200v3
17.91
LOC7496004
annexin D4
7496004
POPTR_001G024900v3
17.82
LOC7457723
U-box domain-containing protein 19
7457723
POPTR_015G074200v3
17.79
LOC7493180
ubiquinol oxidase 2, mitochondrial
7493180
POPTR_012G001600v3
17.75
LOC7494389
uncharacterized LOC7494389
7494389
POPTR_013G090200v3
17.61
LOC7478518
protein GAST1
7478518
POPTR_001G254100v3
17.54
LOC18095659
dynein light chain 1, cytoplasmic
18095659
POPTR_001G407900v3
17.45
LOC7490956
metallothiol transferase FosB
7490956
POPTR_001G171600v3
17.43
LOC7494287
auxin-responsive protein SAUR21
7494287
POPTR_009G126300v3
17.39
LOC7496907
peroxidase 64
7496907
POPTR_002G018000v3
17.33
LOC7497378
expansin-B3
7497378
POPTR_013G134300v3
17.33
LOC7469655
uncharacterized LOC7469655
7469655
POPTR_009G084400v3
17.27
LOC7497818
uncharacterized LOC7497818
7497818
POPTR_003G135400v3
17.24
LOC7473436
uncharacterized LOC7473436
7473436
POPTR_008G159200v3
17.16
LOC18096890
expansin-like B1
18096890
POPTR_003G083200v3
17.15
LOC7469857
syntaxin-related protein KNOLLE
7469857
POPTR_019G030800v3
17.10
LOC7489643
syntaxin-related protein KNOLLE
7489643
POPTR_013G053200v3
17.01
LOC7470435
endochitinase 2
7470435
POPTR_004G182000v3
16.97
LOC7474391
uncharacterized LOC7474391
7474391
POPTR_010G179300v3
16.84
LOC7472358
9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic
7472358
POPTR_011G112400v3
16.80
LOC18104448
ABC transporter G family member 25
18104448
POPTR_013G111900v3
16.79
LOC7481607
organic cation/carnitine transporter 3
7481607
POPTR_010G174300v3
16.75
LOC7495509
peroxidase 72
7495509
POPTR_007G019300v3
16.70
LOC7495209
stachyose synthase
7495209
POPTR_014G118400v3
16.68
LOC7472467
uncharacterized LOC7472467
7472467
POPTR_008G078000v3
16.60
LOC7492393
galactinol synthase 1
7492393
POPTR_010G042000v3
16.49
LOC18108623
uncharacterized LOC18108623
18108623
POPTR_019G116500v3
16.45
LOC7464498
heavy metal-associated isoprenylated plant protein 9
7464498
POPTR_015G003900v3
16.34
LOC18104599
uncharacterized LOC18104599
18104599
POPTR_013G127900v3
16.32
LOC7454532
uncharacterized LOC7454532
7454532
POPTR_012G094400v3
16.31
LOC18099196
resistance to inhibitors of cholinesterase protein 3
18099196
POPTR_005G114100v3
16.29
LOC112328712
U1 spliceosomal RNA
112328712
16.28
LOC7469668
uncharacterized LOC7469668
7469668
POPTR_009G081900v3
16.26
LOC7483571
17.4 kDa class III heat shock protein
7483571
POPTR_003G071100v3
16.19
LOC18095607
glutelin type-A 3
18095607
POPTR_001G402600v3
16.15
LOC112327842
BURP domain protein RD22-like
112327842
POPTR_006G243700v3
16.12
LOC7470765
uncharacterized LOC7470765
7470765
POPTR_001G289100v3
16.11
LOC18097015
36.4 kDa proline-rich protein
18097015
POPTR_003G111300v3
16.09
LOC18110663
ankyrin repeat-containing protein At5g02620
18110663
POPTR_019G107800v3
16.04
LOC7465228
galactinol synthase 2
7465228
POPTR_013G005900v3
16.00
LOC7480716
protein JASON
7480716
POPTR_002G057000v3
15.96
LOC7463780
uncharacterized LOC7463780
7463780
POPTR_018G046500v3
15.94
LOC7465139
ABC transporter G family member 15
7465139
POPTR_001G255800v3
15.92
LOC18098272
MLO-like protein 4
18098272
POPTR_004G218500v3
15.91
LOC7488722
probably inactive leucine-rich repeat receptor-like protein kinase IMK2
7488722
POPTR_016G126300v3
15.91
LOC7463600
E3 ubiquitin-protein ligase SINAT2
7463600
POPTR_003G215400v3
15.90
LOC7454859
asparagine synthetase [glutamine-hydrolyzing] 1
7454859
POPTR_009G072900v3
15.89
LOC7461177
uncharacterized LOC7461177
7461177
POPTR_004G118700v3
15.87
LOC18097977
18.1 kDa class I heat shock protein
18097977
POPTR_004G187200v3
15.85
LOC7485810
basic leucine zipper 1
7485810
POPTR_010G142900v3
15.85
LOC112325947
uncharacterized LOC112325947
112325947
POPTR_T132100v3
15.82
LOC7460564
uncharacterized LOC7460564
7460564
POPTR_001G059500v3
15.82
LOC7467900
uncharacterized LOC7467900
7467900
POPTR_017G094200v3
15.79
LOC7457873
chlorophyll a-b binding protein 6, chloroplastic
7457873
POPTR_008G041000v3
15.75
LOC7478066
scarecrow-like protein 28
7478066
POPTR_001G109400v3
15.75
LOC7478884
probable xyloglucan endotransglucosylase/hydrolase protein 23
7478884
POPTR_013G005700v3
15.71
LOC7458080
probable pectate lyase 18
7458080
POPTR_012G091500v3
15.69
LOC7496055
ethylene-responsive transcription factor ERF003
7496055
POPTR_001G048200v3
15.68
LOC7474675
36.4 kDa proline-rich protein
7474675
POPTR_006G065500v3
15.67
Lower 100 Genes
Symbol
Function*
Entrez Gene ID*
Other ID
PC
LOC7467239
homeobox protein knotted-1-like 2
7467239
POPTR_002G113300v3
-65.62
LOC7486809
caffeic acid 3-O-methyltransferase
7486809
POPTR_014G106600v3
-65.07
LOC18098217
hybrid signal transduction histidine kinase M
18098217
POPTR_004G212900v3
-64.57
LOC18104619
uncharacterized LOC18104619
18104619
POPTR_013G129900v3
-64.14
LOC7465518
14 kDa proline-rich protein DC2.15
7465518
POPTR_003G111400v3
-63.90
LOC18108581
desmethylxanthohumol 6'-O-methyltransferase
18108581
POPTR_019G102900v3
-63.17
LOC18104971
cytochrome P450 CYP82D47
18104971
POPTR_014G037900v3
-62.22
LOC7463625
homeobox protein SBH1
7463625
POPTR_004G004700v3
-61.97
LOC18105479
peroxidase 5
18105479
POPTR_015G003600v3
-61.58
LOC7464036
BURP domain-containing protein BNM2A
7464036
POPTR_009G114600v3
-60.93
LOC7459171
probable glutathione S-transferase
7459171
POPTR_001G431400v3
-60.77
LOC18104827
isoflavone 2'-hydroxylase
18104827
POPTR_014G021700v3
-60.70
LOC18099238
peroxidase 72
18099238
POPTR_005G118700v3
-60.48
LOC18098678
respiratory burst oxidase homolog protein B
18098678
POPTR_005G026200v3
-60.06
LOC18109727
basic 7S globulin
18109727
POPTR_013G070300v3
-59.94
LOC7467535
AT-hook motif nuclear-localized protein 20
7467535
POPTR_008G164500v3
-59.86
LOC7482129
subtilisin-like protease SBT1.3
7482129
POPTR_012G131500v3
-59.63
LOC112323828
uncharacterized LOC112323828
112323828
POPTR_013G007900v3
-59.59
LOC112326669
cytochrome P450 83B1-like
112326669
POPTR_002G026500v3
-59.48
LOC18108832
probable glutathione S-transferase
18108832
POPTR_001G436700v3
-59.09
LOC7480952
cytochrome P450 71B36
7480952
POPTR_008G184400v3
-59.08
LOC7490667
cytochrome P450 83B1
7490667
POPTR_002G025800v3
-58.74
LOC18105842
homeobox protein knotted-1-like 6
18105842
POPTR_015G079100v3
-58.57
LOC7458442
aspartyl protease family protein At5g10770
7458442
POPTR_018G014900v3
-58.43
LOC18111166
cytochrome P450 81E8
18111166
POPTR_003G007400v3
-58.32
LOC7494476
uncharacterized acetyltransferase At3g50280
7494476
POPTR_008G065000v3
-58.25
LOC18096896
cationic amino acid transporter 6, chloroplastic
18096896
POPTR_003G083700v3
-58.14
LOC7464039
organ-specific protein S2
7464039
POPTR_009G114700v3
-57.95
LOC7478680
pathogenesis-related protein 1
7478680
POPTR_001G288600v3
-57.85
LOC7462606
subtilisin-like protease SBT1.9
7462606
POPTR_007G045100v3
-57.74
LOC18094338
protein LATERAL ROOT PRIMORDIUM 1
18094338
POPTR_001G027700v3
-57.74
LOC18098801
disease resistance protein RPM1
18098801
POPTR_005G035700v3
-57.50
LOC7465124
osmotin-like protein
7465124
POPTR_001G237600v3
-57.48
LOC112325798
uncharacterized LOC112325798
112325798
-57.03
LOC7458443
aspartyl protease family protein At5g10770
7458443
POPTR_018G014700v3
-56.90
LOC18096306
ent-kaurene oxidase, chloroplastic
18096306
POPTR_002G129700v3
-56.79
LOC18102467
protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4
18102467
POPTR_010G070700v3
-56.76
LOC7471071
squamosa promoter-binding-like protein 6
7471071
POPTR_008G097900v3
-56.71
LOC18098895
flavonoid 3'-monooxygenase
18098895
POPTR_005G045800v3
-56.63
LOC7475946
G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290
7475946
POPTR_010G025800v3
-56.47
LOC112327473
probable glutathione S-transferase
112327473
POPTR_001G431700v3
-56.26
LOC18103792
homeobox protein knotted-1-like 2
18103792
POPTR_012G087100v3
-56.21
LOC7462868
WUSCHEL-related homeobox 4
7462868
POPTR_002G124100v3
-56.18
LOC7487006
protein NRT1/ PTR FAMILY 5.4
7487006
POPTR_001G027100v3
-56.15
LOC7485450
polyphenol oxidase, chloroplastic
7485450
POPTR_011G047300v3
-56.06
LOC18104828
isoflavone 2'-hydroxylase
18104828
POPTR_014G021800v3
-56.04
LOC18107413
uncharacterized LOC18107413
18107413
-56.01
LOC7491376
probable glutathione S-transferase
7491376
POPTR_001G437000v3
-55.96
LOC18100696
uncharacterized LOC18100696
18100696
POPTR_006G258700v3
-55.79
LOC7463390
protein NRT1/ PTR FAMILY 7.2
7463390
POPTR_014G179400v3
-55.76
LOC7485893
uncharacterized LOC7485893
7485893
-55.59
LOC7482608
acid phosphatase 1
7482608
POPTR_016G139700v3
-55.42
LOC18103101
pathogenesis-related genes transcriptional activator PTI5
18103101
POPTR_011G061700v3
-55.25
LOC112324492
transcription factor RAX2
112324492
POPTR_016G099200v3
-55.18
LOC7494372
kunitz trypsin inhibitor 2
7494372
POPTR_004G067900v3
-55.15
LOC7472738
probable membrane-associated kinase regulator 2
7472738
POPTR_001G098000v3
-55.12
LOC7495544
AP2-like ethylene-responsive transcription factor AIL6
7495544
POPTR_007G011600v3
-54.90
LOC7488162
homeobox-leucine zipper protein HOX11
7488162
POPTR_009G023600v3
-54.87
LOC7486687
basic blue protein
7486687
POPTR_001G209300v3
-54.83
LOC7488774
adenine/guanine permease AZG1
7488774
POPTR_016G133800v3
-54.78
LOC7458915
butyrate--CoA ligase AAE11, peroxisomal
7458915
POPTR_016G034800v3
-54.76
LOC7471962
protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3
7471962
POPTR_002G037500v3
-54.72
LOC112326586
uncharacterized LOC112326586
112326586
-54.68
LOC18102366
zinc finger protein 5
18102366
POPTR_010G036400v3
-54.64
LOC18104942
transcription factor MYB77
18104942
POPTR_014G035100v3
-54.63
LOC18101322
putative glycine-rich cell wall structural protein 1
18101322
POPTR_008G028100v3
-54.48
LOC7491401
benzyl alcohol O-benzoyltransferase
7491401
POPTR_001G448000v3
-54.40
LOC7484341
ethylene-responsive transcription factor ERF113
7484341
POPTR_012G108500v3
-54.40
LOC18107228
F-box/kelch-repeat protein At3g27150
18107228
POPTR_017G069500v3
-54.34
LOC7466875
amino acid permease 4
7466875
POPTR_005G068900v3
-54.22
LOC7480605
allene oxide synthase 3
7480605
POPTR_004G149000v3
-54.20
LOC112327500
homeobox protein knotted-1-like 1
112327500
POPTR_005G014200v3
-54.04
LOC18108209
uncharacterized LOC18108209
18108209
POPTR_019G027100v3
-53.97
LOC18098174
AT-hook motif nuclear-localized protein 25
18098174
POPTR_004G208600v3
-53.86
LOC7497799
protein SPIRAL1-like 5
7497799
POPTR_003G131600v3
-53.85
LOC7480363
probable L-type lectin-domain containing receptor kinase S.5
7480363
POPTR_001G455500v3
-53.80
LOC7482599
cytochrome P450 71A1
7482599
POPTR_016G137600v3
-53.80
LOC7475947
G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290
7475947
POPTR_010G025700v3
-53.77
LOC7469036
cytochrome P450 71B36
7469036
POPTR_008G184900v3
-53.75
LOC7457890
protein NRT1/ PTR FAMILY 2.7
7457890
POPTR_008G045100v3
-53.69
LOC18105023
cytochrome P450 734A1
18105023
POPTR_014G043100v3
-53.63
LOC18100930
amino acid permease 4
18100930
POPTR_007G100100v3
-53.58
LOC7463303
alpha carbonic anhydrase 7
7463303
POPTR_009G010200v3
-53.56
LOC7462904
dof zinc finger protein DOF1.6
7462904
POPTR_002G129600v3
-53.55
LOC7488130
uncharacterized LOC7488130
7488130
-53.55
LOC7491637
trihelix transcription factor PTL
7491637
POPTR_010G235000v3
-53.48
LOC18098587
homeobox protein knotted-1-like 1
18098587
POPTR_005G017200v3
-53.44
LOC7455945
protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 7
7455945
POPTR_011G109900v3
-53.41
LOC7483143
dof zinc finger protein DOF3.4
7483143
POPTR_007G036400v3
-53.37
LOC7478899
homeobox protein knotted-1-like 1
7478899
POPTR_013G008600v3
-53.32
LOC112329017
metallothionein-like protein type 2
112329017
POPTR_001G041300v3
-53.31
LOC18096094
cytochrome P450 83B1
18096094
POPTR_002G025300v3
-53.29
LOC7480951
cytochrome P450 71B36
7480951
POPTR_008G184000v3
-53.20
LOC7480409
berberine bridge enzyme-like 15
7480409
POPTR_001G463400v3
-53.18
LOC7461382
peroxidase 15
7461382
POPTR_003G214900v3
-53.14
LOC7470575
CASP-like protein 3A2
7470575
POPTR_001G188000v3
-53.13
LOC18095866
indole-3-acetic acid-amido synthetase GH3.6
18095866
POPTR_001G410400v3
-53.10
LOC7492256
uncharacterized LOC7492256
7492256
POPTR_006G213100v3
-53.09
LOC7455947
epidermis-specific secreted glycoprotein EP1
7455947
POPTR_011G110200v3
-53.01
LOC7464678
probable inactive patatin-like protein 9
7464678
POPTR_005G210100v3
-52.99
Lower 100 Genes
Symbol
Function*
Entrez Gene ID*
Other ID
PC
LOC18105022
cytochrome P450 734A1
18105022
POPTR_014G043000v3
-59.39
LOC7491394
benzyl alcohol O-benzoyltransferase
7491394
POPTR_001G447500v3
-49.34
LOC7459765
endoglucanase 8
7459765
POPTR_010G109200v3
-46.30
LOC18097400
beta-glucosidase 46
18097400
POPTR_004G019300v3
-45.73
LOC7478050
tubulin beta-1 chain
7478050
POPTR_001G106100v3
-45.32
LOC7495107
auxin transporter-like protein 3
7495107
POPTR_002G087000v3
-43.75
LOC18096496
major latex allergen Hev b 5
18096496
POPTR_002G223100v3
-43.40
LOC7465852
tubulin beta-5 chain
7465852
POPTR_003G125400v3
-43.13
LOC18095988
benzyl alcohol O-benzoyltransferase
18095988
POPTR_001G447400v3
-43.01
LOC7482147
fasciclin-like arabinogalactan protein 12
7482147
POPTR_012G127900v3
-42.85
LOC7496848
glucan endo-1,3-beta-glucosidase 12
7496848
POPTR_002G007300v3
-42.48
LOC7480392
patellin-4
7480392
POPTR_001G461400v3
-42.14
LOC18097241
peroxidase A2
18097241
POPTR_003G214700v3
-42.10
LOC7468527
E3 ubiquitin-protein ligase RNF34
7468527
POPTR_014G158900v3
-42.03
LOC7478636
uncharacterized LOC7478636
7478636
POPTR_009G145700v3
-41.76
LOC7464476
caffeic acid 3-O-methyltransferase 3
7464476
POPTR_015G003100v3
-41.75
LOC7489623
probable RNA-binding protein ARP1
7489623
POPTR_010G216800v3
-40.77
LOC7462495
phosphomethylethanolamine N-methyltransferase
7462495
POPTR_015G039000v3
-40.47
LOC18102014
uncharacterized LOC18102014
18102014
POPTR_009G037500v3
-40.39
LOC7482129
subtilisin-like protease SBT1.3
7482129
POPTR_012G131500v3
-40.08
LOC7479828
trihelix transcription factor PTL
7479828
POPTR_008G025600v3
-39.58
LOC7486746
uncharacterized LOC7486746
7486746
POPTR_012G051500v3
-39.45
LOC18107762
ribulose bisphosphate carboxylase small chain clone 512
18107762
POPTR_018G091400v3
-39.32
LOC7479244
uncharacterized LOC7479244
7479244
POPTR_003G119400v3
-38.99
LOC7495241
probable pectinesterase/pectinesterase inhibitor 7
7495241
POPTR_014G127000v3
-38.97
LOC7469382
probable pectate lyase 8
7469382
POPTR_014G178100v3
-38.61
LOC7484878
serine carboxypeptidase-like 45
7484878
POPTR_012G105500v3
-38.11
LOC7475559
zinc finger CCCH domain-containing protein 15
7475559
POPTR_010G118700v3
-38.08
LOC7453542
cell division cycle 20.2, cofactor of APC complex
7453542
POPTR_019G021800v3
-38.05
LOC18098936
uncharacterized LOC18098936
18098936
POPTR_005G050000v3
-38.03
LOC7492760
uncharacterized LOC7492760
7492760
POPTR_014G095600v3
-37.94
LOC7489643
syntaxin-related protein KNOLLE
7489643
POPTR_013G053200v3
-37.88
LOC7466839
protein ASPARTIC PROTEASE IN GUARD CELL 2
7466839
POPTR_005G063000v3
-37.50
LOC7469857
syntaxin-related protein KNOLLE
7469857
POPTR_019G030800v3
-37.50
LOC7487081
kinesin-like protein KIN-8A
7487081
POPTR_012G058400v3
-37.49
LOC7474219
mavicyanin
7474219
POPTR_010G089900v3
-37.48
LOC7464807
cytochrome b561 domain-containing protein At2g30890
7464807
POPTR_005G204300v3
-37.43
LOC7464614
laccase-12
7464614
POPTR_010G183600v3
-37.22
LOC7495983
ABC transporter B family member 15
7495983
POPTR_017G085000v3
-37.19
LOC7460791
TORTIFOLIA1-like protein 4
7460791
POPTR_010G038900v3
-37.19
LOC18095049
uncharacterized LOC18095049
18095049
POPTR_001G245400v3
-37.05
LOC18101887
protein TOO MANY MOUTHS
18101887
POPTR_008G211800v3
-36.96
LOC7490531
sucrose synthase
7490531
POPTR_018G063500v3
-36.85
LOC112327516
14 kDa proline-rich protein DC2.15-like
112327516
POPTR_001G121900v3
-36.80
LOC7472467
uncharacterized LOC7472467
7472467
POPTR_008G078000v3
-36.58
LOC7467101
high mobility group B protein 13
7467101
POPTR_001G093700v3
-36.55
LOC18106792
reticulon-like protein B17
18106792
POPTR_017G014300v3
-36.55
LOC18101699
uncharacterized LOC18101699
18101699
POPTR_008G192300v3
-36.54
LOC7483997
receptor protein kinase-like protein ZAR1
7483997
POPTR_016G050800v3
-36.54
LOC18104536
trans-resveratrol di-O-methyltransferase
18104536
POPTR_013G120800v3
-36.53
LOC7488337
aspartyl protease family protein 2
7488337
POPTR_008G115900v3
-36.43
LOC7485867
uncharacterized LOC7485867
7485867
POPTR_010G152900v3
-36.42
LOC7491631
serine/threonine-protein kinase D6PKL1
7491631
POPTR_010G236200v3
-36.18
LOC7484755
LRR receptor-like serine/threonine-protein kinase FEI 2
7484755
POPTR_012G071100v3
-36.17
LOC7465494
PLAT domain-containing protein 3
7465494
POPTR_003G107100v3
-36.10
LOC7469655
uncharacterized LOC7469655
7469655
POPTR_009G084400v3
-35.99
LOC7463603
peroxidase A2
7463603
POPTR_003G214800v3
-35.93
LOC18093972
14 kDa proline-rich protein DC2.15
18093972
POPTR_T145400v3
-35.92
LOC18097015
36.4 kDa proline-rich protein
18097015
POPTR_003G111300v3
-35.88
LOC7486757
kinesin-like protein NACK1
7486757
POPTR_012G054400v3
-35.85
LOC7467689
protein WVD2-like 7
7467689
POPTR_001G336300v3
-35.79
LOC7470690
protein IQ-DOMAIN 1
7470690
POPTR_006G226600v3
-35.71
LOC7498063
leucine-rich repeat extensin-like protein 6
7498063
POPTR_010G083000v3
-35.67
LOC7479690
indole-3-acetic acid-induced protein ARG7
7479690
POPTR_002G024500v3
-35.55
LOC7471686
uncharacterized LOC7471686
7471686
POPTR_001G465400v3
-35.45
LOC7455400
probable xyloglucan endotransglucosylase/hydrolase protein 33
7455400
POPTR_014G115000v3
-35.39
LOC7453885
kinesin-like protein NACK1
7453885
POPTR_015G044600v3
-35.38
LOC18099196
resistance to inhibitors of cholinesterase protein 3
18099196
POPTR_005G114100v3
-35.26
LOC18104599
uncharacterized LOC18104599
18104599
POPTR_013G127900v3
-35.20
LOC7471525
protein UPSTREAM OF FLC
7471525
POPTR_005G078300v3
-35.17
LOC7474391
uncharacterized LOC7474391
7474391
POPTR_010G179300v3
-35.13
LOC7478725
uncharacterized LOC7478725
7478725
POPTR_009G090900v3
-35.12
LOC7479749
uncharacterized LOC7479749
7479749
POPTR_002G038200v3
-35.06
LOC7494682
nitrate regulatory gene2 protein
7494682
POPTR_005G249400v3
-35.06
LOC18098786
probable microtubule-binding protein TANGLED
18098786
POPTR_005G033200v3
-35.05
LOC7462100
laccase-12
7462100
POPTR_008G073700v3
-35.01
LOC7481802
patatin-like protein 7
7481802
POPTR_015G122700v3
-34.98
LOC7480040
probable inactive patatin-like protein 9
7480040
POPTR_002G052600v3
-34.97
LOC7479527
uncharacterized LOC7479527
7479527
POPTR_006G192500v3
-34.96
LOC7491637
trihelix transcription factor PTL
7491637
POPTR_010G235000v3
-34.96
LOC7490520
protein BIG GRAIN 1-like A
7490520
POPTR_018G065000v3
-34.66
LOC18108496
probable O-methyltransferase 3
18108496
POPTR_019G093000v3
-34.49
LOC7471566
pleiotropic drug resistance protein 1
7471566
POPTR_006G248500v3
-34.42
LOC7461370
phytoene synthase 2, chloroplastic
7461370
POPTR_003G218000v3
-34.41
LOC7476412
cytochrome P450 81E8
7476412
POPTR_005G143800v3
-34.40
LOC7476311
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1
7476311
POPTR_004G062900v3
-34.37
LOC7467900
uncharacterized LOC7467900
7467900
POPTR_017G094200v3
-34.37
LOC7459514
uncharacterized LOC7459514
7459514
POPTR_002G250100v3
-34.35
LOC7463670
rho GDP-dissociation inhibitor 1
7463670
POPTR_006G010500v3
-34.30
LOC18104821
putative cyclin-A3-1
18104821
POPTR_014G021100v3
-34.09
LOC7492083
probable metal-nicotianamine transporter YSL7
7492083
POPTR_005G093800v3
-34.06
LOC7482180
probable leucine-rich repeat receptor-like protein kinase At5g63930
7482180
POPTR_012G128700v3
-34.01
LOC7492253
uncharacterized protein At3g28850
7492253
POPTR_006G212700v3
-34.00
LOC7466834
UDP-glucuronate:xylan alpha-glucuronosyltransferase 1
7466834
POPTR_005G061600v3
-33.92
LOC7497799
protein SPIRAL1-like 5
7497799
POPTR_003G131600v3
-33.86
LOC7458288
glucan endo-1,3-beta-glucosidase 12
7458288
POPTR_002G224600v3
-33.82
LOC7485070
alcohol dehydrogenase
7485070
POPTR_007G108400v3
-33.79
LOC18101082
uncharacterized LOC18101082
18101082
POPTR_007G057800v3
-33.72
LOC112328254
alcohol dehydrogenase-like
112328254
POPTR_007G108500v3
-33.55
LOC7478856
cellulose synthase-like protein D5
7478856
POPTR_002G200300v3
-33.47
Lower 100 Genes
Symbol
Function*
Entrez Gene ID*
Other ID
PC
LOC7489432
GDSL esterase/lipase At1g29670
7489432
POPTR_018G089400v3
-69.82
LOC18110359
GDSL esterase/lipase At1g29670
18110359
POPTR_018G089200v3
-63.62
LOC7478081
protein HOTHEAD
7478081
POPTR_001G111500v3
-60.86
LOC7461571
GDSL esterase/lipase At1g29660
7461571
POPTR_018G088600v3
-60.79
LOC7479083
thiamine thiazole synthase 2, chloroplastic
7479083
POPTR_004G020500v3
-59.82
LOC7457873
chlorophyll a-b binding protein 6, chloroplastic
7457873
POPTR_008G041000v3
-59.42
LOC18100640
LRR receptor-like serine/threonine-protein kinase ERECTA
18100640
POPTR_006G220100v3
-59.19
LOC7494899
cytochrome P450 77A3
7494899
POPTR_008G025500v3
-57.90
LOC18107755
GDSL esterase/lipase At1g29660
18107755
POPTR_018G089500v3
-57.77
LOC18097807
probable carboxylesterase 1
18097807
POPTR_004G142900v3
-56.22
LOC7471197
GDSL esterase/lipase At4g28780
7471197
POPTR_002G253400v3
-55.69
LOC7496048
linoleate 13S-lipoxygenase 2-1, chloroplastic
7496048
POPTR_001G015400v3
-55.68
LOC7471832
chlorophyll a-b binding protein of LHCII type 1
7471832
POPTR_011G079500v3
-55.67
LOC7461618
protein ECERIFERUM 3
7461618
POPTR_018G099400v3
-54.55
LOC18106708
ABC transporter G family member 11
18106708
POPTR_017G155300v3
-54.34
LOC7463044
expansin-A10
7463044
POPTR_004G123200v3
-54.00
LOC18100345
auxin-binding protein ABP19a
18100345
POPTR_006G142600v3
-53.91
LOC7469999
aureusidin synthase
7469999
POPTR_004G156500v3
-53.84
LOC7461568
GDSL esterase/lipase At1g29670
7461568
POPTR_018G088500v3
-53.42
LOC7484752
uncharacterized LOC7484752
7484752
POPTR_012G070600v3
-52.63
LOC18105987
probable galactinol--sucrose galactosyltransferase 2
18105987
POPTR_016G002300v3
-52.47
LOC7455630
zinc finger protein 8
7455630
POPTR_006G195100v3
-52.22
LOC7482588
non-specific lipid-transfer protein 1
7482588
POPTR_016G135800v3
-51.55
LOC7463666
anthocyanidin 3-O-glucosyltransferase 2
7463666
POPTR_006G010000v3
-51.13
LOC7474394
fatty alcohol:caffeoyl-CoA acyltransferase
7474394
POPTR_010G180000v3
-50.55
LOC7461193
protein TIC 62, chloroplastic
7461193
POPTR_004G150300v3
-50.44
LOC7485534
thiamine thiazole synthase 2, chloroplastic
7485534
POPTR_011G025200v3
-50.43
LOC7485729
3-ketoacyl-CoA synthase 12
7485729
POPTR_001G234500v3
-50.42
LOC7493257
DNA damage-repair/toleration protein DRT100
7493257
POPTR_003G207000v3
-50.26
LOC7470700
GATA transcription factor 21
7470700
POPTR_006G229200v3
-50.03
LOC18109826
linoleate 13S-lipoxygenase 2-1, chloroplastic
18109826
POPTR_001G015600v3
-49.76
LOC7463588
protein YLS3
7463588
POPTR_003G217000v3
-49.74
LOC7463155
photosystem II 22 kDa protein, chloroplastic
7463155
POPTR_002G083500v3
-49.72
LOC18095620
beta-glucosidase 18
18095620
POPTR_001G403900v3
-49.44
LOC7493970
chlorophyll a-b binding protein of LHCII type 1
7493970
POPTR_005G239200v3
-49.24
LOC18104896
photosystem I chlorophyll a/b-binding protein 5, chloroplastic
18104896
POPTR_014G029700v3
-49.21
LOC7493971
chlorophyll a-b binding protein of LHCII type 1
7493971
POPTR_005G239300v3
-49.03
LOC7455614
probable mannitol dehydrogenase
7455614
POPTR_006G199100v3
-48.95
LOC7469083
glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplastic
7469083
POPTR_008G195100v3
-48.78
LOC18095653
chlorophyll a-b binding protein 13, chloroplastic
18095653
POPTR_001G407100v3
-48.47
LOC18105327
protein ECERIFERUM 1
18105327
POPTR_014G152300v3
-48.07
LOC18105329
protein ECERIFERUM 1
18105329
POPTR_014G152600v3
-47.95
LOC7458376
14 kDa proline-rich protein DC2.15
7458376
POPTR_018G025900v3
-47.95
LOC7459521
glycine-rich protein 5
7459521
POPTR_002G252400v3
-47.94
LOC18110360
GDSL esterase/lipase At5g45670
18110360
POPTR_018G089300v3
-47.88
LOC7459011
uncharacterized LOC7459011
7459011
POPTR_018G031100v3
-47.84
LOC18099145
probable aquaporin PIP2-8
18099145
POPTR_005G109300v3
-47.69
LOC7488885
axial regulator YABBY 1
7488885
POPTR_014G066700v3
-47.56
LOC7493413
putative cysteine-rich receptor-like protein kinase 20
7493413
POPTR_018G111600v3
-47.47
LOC7469930
putative axial regulator YABBY 2
7469930
POPTR_016G067300v3
-47.41
LOC18094302
linoleate 13S-lipoxygenase 2-1, chloroplastic
18094302
POPTR_001G015500v3
-47.27
LOC7478338
putative UPF0481 protein At3g02645
7478338
POPTR_003G205900v3
-47.19
LOC7476660
pectinesterase
7476660
POPTR_018G051400v3
-47.06
LOC112326879
auxin-binding protein ABP19a-like
112326879
POPTR_003G065300v3
-47.00
LOC7459061
MLP-like protein 423
7459061
POPTR_010G096000v3
-46.97
LOC7495733
leucine-rich repeat extensin-like protein 3
7495733
POPTR_006G245600v3
-46.87
LOC18097853
uncharacterized LOC18097853
18097853
POPTR_004G147300v3
-46.77
LOC7495323
uncharacterized protein ycf23
7495323
POPTR_011G080900v3
-46.70
LOC18097900
proline-rich protein 4
18097900
POPTR_004G168600v3
-46.66
LOC7491995
NAD(P)H-quinone oxidoreductase subunit U, chloroplastic
7491995
POPTR_006G221900v3
-46.65
LOC7454978
photosystem II 10 kDa polypeptide, chloroplastic
7454978
POPTR_011G142200v3
-46.35
LOC18095515
vicilin-like seed storage protein At2g18540
18095515
POPTR_001G393700v3
-46.34
LOC18103531
fructose-bisphosphate aldolase 5, cytosolic
18103531
POPTR_011G165000v3
-46.27
LOC18110979
rubredoxin
18110979
POPTR_013G035700v3
-46.18
LOC7462884
abscisic acid 8'-hydroxylase 4
7462884
POPTR_002G126100v3
-46.05
LOC7475695
auxin-binding protein ABP19a
7475695
POPTR_013G141900v3
-46.02
LOC18094192
glycine cleavage system H protein, mitochondrial
18094192
POPTR_001G144800v3
-45.70
LOC112326027
uncharacterized LOC112326027
112326027
POPTR_T145800v3
-45.68
LOC18103943
silicon efflux transporter LSI2
18103943
POPTR_012G144000v3
-45.56
LOC7454678
zinc finger protein 8
7454678
POPTR_016G060600v3
-45.45
LOC7471126
photosystem I reaction center subunit XI, chloroplastic
7471126
POPTR_002G239700v3
-45.40
LOC7456308
chaperone protein dnaJ C76, chloroplastic
7456308
POPTR_007G072600v3
-45.39
LOC7468515
fatty acid hydroperoxide lyase, chloroplastic
7468515
POPTR_014G155800v3
-45.30
LOC7485185
zinc-finger homeodomain protein 9
7485185
POPTR_012G040900v3
-45.21
LOC7495294
alpha-farnesene synthase
7495294
POPTR_011G031800v3
-45.18
LOC18098559
psbP domain-containing protein 1, chloroplastic
18098559
POPTR_005G010700v3
-45.14
LOC18098679
formin-like protein 11
18098679
POPTR_005G026300v3
-44.89
LOC7467036
beta-carotene isomerase D27, chloroplastic
7467036
POPTR_001G083300v3
-44.84
LOC18105332
protein ECERIFERUM 1
18105332
POPTR_014G152900v3
-44.79
LOC7472460
GDSL esterase/lipase At1g06990
7472460
POPTR_008G076600v3
-44.76
LOC7489712
myb-related protein 306
7489712
POPTR_013G067500v3
-44.58
LOC7461508
putative S-adenosyl-L-methionine-dependent methyltransferase Mvan_0910
7461508
POPTR_002G260300v3
-44.36
LOC7463840
haloalkane dehalogenase
7463840
POPTR_001G201500v3
-44.20
LOC7464751
NAD(P)H-quinone oxidoreductase subunit N, chloroplastic
7464751
POPTR_013G160600v3
-44.11
LOC7497862
cellulose synthase-like protein G3
7497862
POPTR_003G142300v3
-44.04
LOC18109217
G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410
18109217
POPTR_004G028700v3
-44.03
LOC7460107
uncharacterized LOC7460107
7460107
POPTR_009G155300v3
-43.82
LOC7477424
ribulose bisphosphate carboxylase small chain, chloroplastic
7477424
POPTR_004G100000v3
-43.71
LOC18106819
peptidyl-prolyl cis-trans isomerase FKBP16-3, chloroplastic
18106819
POPTR_017G017500v3
-43.64
LOC7482994
UDP-glycosyltransferase 88B1
7482994
POPTR_012G036000v3
-43.63
LOC7467372
photosystem II 5 kDa protein, chloroplastic
7467372
POPTR_009G052500v3
-43.43
LOC7463976
aquaporin AQPAn.G
7463976
POPTR_009G128500v3
-43.09
LOC7455648
peroxiredoxin Q, chloroplastic
7455648
POPTR_006G137500v3
-43.09
LOC7482788
chlorophyll a-b binding protein 7, chloroplastic
7482788
POPTR_001G056700v3
-43.08
LOC18094096
phosphoribulokinase, chloroplastic
18094096
POPTR_001G134000v3
-43.01
LOC7482333
ABC transporter G family member 15
7482333
POPTR_009G051200v3
-43.00
LOC18096300
subtilisin-like protease SBT1.9
18096300
POPTR_002G124500v3
-42.97
LOC7497385
anthocyanidin 3-O-glucosyltransferase 7
7497385
POPTR_013G143900v3
-42.96
LOC18109836
UDP-glycosyltransferase 74E2
18109836
POPTR_017G032700v3
-42.92
LOC7489907
homeobox-leucine zipper protein HDG2
7489907
POPTR_002G230200v3
-42.90
Lower 100 Genes
Symbol
Function*
Entrez Gene ID*
Other ID
PC
LOC7497095
endochitinase PR4
7497095
POPTR_019G094000v3
-61.43
LOC18108499
endochitinase EP3
18108499
POPTR_019G093900v3
-59.07
LOC7474214
primary amine oxidase
7474214
POPTR_010G089000v3
-58.49
LOC7493197
chalcone synthase 1
7493197
POPTR_003G176700v3
-57.59
LOC7498090
basic endochitinase CHB4
7498090
POPTR_019G094100v3
-55.38
LOC18101160
probable indole-3-acetic acid-amido synthetase GH3.1
18101160
POPTR_007G050300v3
-54.35
LOC7469845
bark storage protein A
7469845
POPTR_019G050200v3
-53.75
LOC18095154
pathogenesis-related protein 1
18095154
POPTR_T131500v3
-53.68
LOC7465124
osmotin-like protein
7465124
POPTR_001G237600v3
-52.86
LOC7480368
3-hydroxy-3-methylglutaryl-coenzyme A reductase 1
7480368
POPTR_001G457000v3
-51.47
LOC7486336
cytochrome P450 78A7
7486336
POPTR_005G084500v3
-50.21
LOC7493352
EG45-like domain containing protein
7493352
POPTR_018G098200v3
-49.13
LOC18100487
GDSL esterase/lipase At5g45670
18100487
POPTR_006G166800v3
-48.75
LOC18095305
gibberellin-regulated protein 14
18095305
POPTR_001G350600v3
-48.29
LOC7480140
salicylate carboxymethyltransferase
7480140
POPTR_007G021300v3
-47.86
LOC112324307
acidic endochitinase SE2-like
112324307
POPTR_015G023900v3
-47.65
LOC7485450
polyphenol oxidase, chloroplastic
7485450
POPTR_011G047300v3
-47.31
LOC7489106
protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4
7489106
POPTR_011G156600v3
-46.58
LOC18100486
GDSL esterase/lipase At5g45670
18100486
POPTR_006G166700v3
-46.43
LOC18094781
uncharacterized LOC18094781
18094781
POPTR_001G188900v3
-46.39
LOC7464794
protodermal factor 1
7464794
POPTR_005G200900v3
-46.14
LOC18103438
probable glutathione S-transferase parC
18103438
POPTR_011G140600v3
-45.81
LOC7493198
chalcone synthase 1
7493198
POPTR_003G176800v3
-45.59
LOC7465052
probable indole-3-acetic acid-amido synthetase GH3.1
7465052
POPTR_001G298300v3
-44.98
LOC112325615
uncharacterized LOC112325615
112325615
-44.92
LOC7479547
class V chitinase
7479547
POPTR_006G188300v3
-44.87
LOC18097932
uncharacterized LOC18097932
18097932
POPTR_T020000v3
-44.35
LOC18105663
acidic endochitinase
18105663
POPTR_015G024100v3
-44.32
LOC7465826
leucoanthocyanidin dioxygenase
7465826
POPTR_003G119100v3
-43.97
LOC18108208
uncharacterized LOC18108208
18108208
POPTR_019G027000v3
-43.74
LOC18108209
uncharacterized LOC18108209
18108209
POPTR_019G027100v3
-43.51
LOC18108207
uncharacterized LOC18108207
18108207
POPTR_019G026900v3
-43.36
LOC18107416
cinnamoyl-CoA reductase-like SNL6
18107416
POPTR_017G110500v3
-42.18
LOC7490928
leucoanthocyanidin dioxygenase
7490928
POPTR_001G113100v3
-42.17
LOC18101882
major allergen Pru ar 1
18101882
POPTR_008G212300v3
-42.12
LOC7478511
glucan endo-1,3-beta-glucosidase
7478511
POPTR_001G255100v3
-41.90
LOC112324670
butyrate--CoA ligase AAE11, peroxisomal-like
112324670
POPTR_017G138400v3
-41.70
LOC18109964
uncharacterized LOC18109964
18109964
POPTR_T055700v3
-41.56
LOC18106561
butyrate--CoA ligase AAE11, peroxisomal
18106561
POPTR_T116500v3
-41.41
LOC7453765
carbonic anhydrase 2
7453765
POPTR_015G076000v3
-41.35
LOC7472993
dirigent protein 23
7472993
POPTR_001G214600v3
-41.15
LOC7468057
probable 2-oxoglutarate-dependent dioxygenase At5g05600
7468057
POPTR_006G101100v3
-41.04
LOC18106059
anthocyanidin 3-O-glucosyltransferase 2
18106059
POPTR_016G017100v3
-41.01
LOC7484626
non-specific lipid-transfer protein 1
7484626
POPTR_006G108100v3
-40.92
LOC7467474
endochitinase PR4
7467474
POPTR_019G093800v3
-40.86
LOC7479071
cytochrome P450 77A1
7479071
POPTR_004G018800v3
-40.83
LOC7467574
uncharacterized LOC7467574
7467574
POPTR_016G078000v3
-40.64
LOC7478680
pathogenesis-related protein 1
7478680
POPTR_001G288600v3
-40.50
LOC18105664
acidic endochitinase
18105664
POPTR_015G024000v3
-40.49
LOC18100730
UDP-glycosyltransferase 73B4
18100730
POPTR_006G272600v3
-40.22
LOC7493199
chalcone synthase 1
7493199
POPTR_003G176900v3
-39.93
LOC7465055
uncharacterized LOC7465055
7465055
-39.77
LOC7491292
uncharacterized protein At5g01610
7491292
POPTR_014G127500v3
-39.74
LOC18109366
uncharacterized LOC18109366
18109366
POPTR_015G070700v3
-39.68
LOC18109505
uncharacterized LOC18109505
18109505
-39.67
LOC18109264
probable glutathione S-transferase
18109264
POPTR_011G140400v3
-39.63
LOC7469860
apyrase 2
7469860
POPTR_019G031200v3
-39.57
LOC7495526
probable pectinesterase 53
7495526
POPTR_007G015700v3
-39.08
LOC18102535
putative Myb family transcription factor At1g14600
18102535
POPTR_010G099600v3
-38.89
LOC18096340
cucumber peeling cupredoxin
18096340
POPTR_002G150600v3
-38.86
LOC7496976
cytochrome P450 86A8
7496976
POPTR_014G085800v3
-38.67
LOC7475620
leucoanthocyanidin reductase
7475620
POPTR_015G050200v3
-38.46
LOC7458180
cytochrome P450 86A7
7458180
POPTR_003G129100v3
-38.36
LOC7469036
cytochrome P450 71B36
7469036
POPTR_008G184900v3
-38.30
LOC7476433
uncharacterized LOC7476433
7476433
POPTR_005G148400v3
-38.24
LOC7497312
growth-regulating factor 1
7497312
POPTR_014G012800v3
-38.21
LOC18110625
uncharacterized LOC18110625
18110625
POPTR_019G028800v3
-38.17
LOC7487723
GDSL esterase/lipase At5g33370
7487723
POPTR_013G051100v3
-38.16
LOC18106165
glucan endo-1,3-beta-glucosidase, basic isoform
18106165
POPTR_016G057400v3
-38.10
LOC18096165
protodermal factor 1
18096165
POPTR_002G060800v3
-37.96
LOC18094858
protein HOTHEAD
18094858
POPTR_001G200800v3
-37.95
LOC7477191
major allergen Pru ar 1
7477191
POPTR_010G000600v3
-37.82
LOC7470074
36.4 kDa proline-rich protein
7470074
POPTR_018G126000v3
-37.59
LOC18100766
transcription factor WER
18100766
POPTR_006G275900v3
-37.43
LOC7471942
dihydroflavonol 4-reductase
7471942
POPTR_002G033600v3
-37.34
LOC18106559
butyrate--CoA ligase AAE11, peroxisomal
18106559
-37.31
LOC18096598
pectinesterase
18096598
POPTR_003G001900v3
-37.24
LOC18104805
cytochrome b5
18104805
POPTR_014G019200v3
-37.05
LOC7460519
chalcone synthase 1
7460519
POPTR_001G051500v3
-37.04
LOC7497264
myb-related protein 308
7497264
POPTR_002G173900v3
-37.03
LOC18098314
protein DMP3
18098314
POPTR_004G223500v3
-36.93
LOC18111197
pectinesterase
18111197
POPTR_T151500v3
-36.84
LOC7478165
dynamin-related protein 4C
7478165
POPTR_003G024800v3
-36.80
LOC18104574
cytochrome P450 82G1
18104574
POPTR_013G125300v3
-36.76
LOC7466021
WD repeat-containing protein LWD1
7466021
POPTR_006G209000v3
-36.75
LOC7466071
GDSL esterase/lipase CPRD49
7466071
POPTR_016G115800v3
-36.68
LOC18096599
pectinesterase
18096599
POPTR_003G002100v3
-36.56
LOC7477833
transcription factor MYB13
7477833
POPTR_001G086700v3
-36.43
LOC18107881
beta-amyrin 28-oxidase
18107881
POPTR_018G149300v3
-36.40
LOC18102943
(3S,6E)-nerolidol synthase 1
18102943
POPTR_011G032300v3
-36.12
LOC7468120
transcription factor MYB108
7468120
POPTR_010G149900v3
-36.12
LOC7475657
heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic
7475657
POPTR_015G043400v3
-36.10
LOC18098695
shikimate O-hydroxycinnamoyltransferase
18098695
POPTR_005G028000v3
-36.09
LOC7456109
uncharacterized LOC7456109
7456109
-36.07
LOC7475030
flavonoid 3',5'-hydroxylase 1
7475030
POPTR_009G069100v3
-36.07
LOC7491288
endoglucanase 17
7491288
POPTR_014G126900v3
-36.06
LOC7463139
probable WRKY transcription factor 43
7463139
POPTR_015G099200v3
-35.96
LOC7478149
dynamin-related protein 4C
7478149
POPTR_003G024600v3
-35.95
LOC7461977
probable pectinesterase 68
7461977
POPTR_003G076900v3
-35.94
LOC7484857
uncharacterized LOC7484857
7484857
POPTR_012G101800v3
-35.82
Lower 100 Genes
Symbol
Function*
Entrez Gene ID*
Other ID
PC
LOC7468487
probable pectinesterase/pectinesterase inhibitor 35
7468487
POPTR_014G149700v3
-48.15
LOC7473251
thioredoxin H-type 2
7473251
POPTR_008G194100v3
-44.43
LOC7466811
endochitinase WIN8
7466811
POPTR_004G182100v3
-44.27
LOC7470402
ubiquitin-conjugating enzyme E2 10
7470402
POPTR_004G175000v3
-43.21
LOC18102584
uncharacterized LOC18102584
18102584
-42.69
LOC7492393
galactinol synthase 1
7492393
POPTR_010G042000v3
-41.62
LOC7456784
squamosa promoter-binding-like protein 3
7456784
POPTR_004G046700v3
-41.31
LOC7470239
uncharacterized LOC7470239
7470239
POPTR_004G051500v3
-40.82
LOC18104534
fasciclin-like arabinogalactan protein 13
18104534
POPTR_013G120600v3
-40.66
LOC7483121
calmodulin-like protein 1
7483121
POPTR_007G042900v3
-37.42
LOC18104906
uncharacterized LOC18104906
18104906
POPTR_014G030700v3
-37.28
LOC7462890
phosphatidylserine decarboxylase proenzyme 3
7462890
POPTR_002G127000v3
-37.11
LOC7458209
aluminum-activated malate transporter 9
7458209
POPTR_003G134100v3
-36.08
LOC112324129
extensin-2-like
112324129
-35.92
LOC7461263
MLP-like protein 28
7461263
POPTR_017G051100v3
-35.39
LOC18097045
homeobox protein BEL1 homolog
18097045
POPTR_003G131300v3
-35.01
LOC7476706
uncharacterized LOC7476706
7476706
POPTR_003G138700v3
-34.89
LOC18106407
mannose/glucose-specific lectin
18106407
POPTR_017G011900v3
-34.75
LOC7469331
fasciclin-like arabinogalactan protein 2
7469331
POPTR_014G168100v3
-34.68
LOC7491320
monothiol glutaredoxin-S9
7491320
POPTR_014G134300v3
-34.59
LOC7462325
early nodulin-like protein 1
7462325
POPTR_011G117800v3
-34.41
LOC7473446
auxin-responsive protein IAA14
7473446
POPTR_008G161200v3
-34.28
LOC112324764
uncharacterized LOC112324764
112324764
-34.26
LOC18109646
pathogenesis-related protein 1
18109646
POPTR_009G083100v3
-34.22
LOC7457994
E3 ubiquitin-protein ligase RNF165
7457994
POPTR_014G139400v3
-34.18
LOC18102077
pathogenesis-related protein 1
18102077
POPTR_009G083300v3
-34.16
LOC7488718
abscisic acid receptor PYL4
7488718
POPTR_016G125400v3
-33.90
LOC7479080
kirola
7479080
POPTR_004G020100v3
-33.80
LOC7474736
oxysterol-binding protein-related protein 4C
7474736
POPTR_006G076400v3
-33.60
LOC112327994
probable pectate lyase 18
112327994
POPTR_006G196400v3
-33.45
LOC7487337
abscisic acid receptor PYL4
7487337
POPTR_006G104100v3
-33.36
LOC7480132
protein RADIALIS-like 3
7480132
POPTR_007G023800v3
-33.24
LOC18100732
probable sarcosine oxidase
18100732
POPTR_006G272800v3
-33.07
LOC18111301
monothiol glutaredoxin-S9
18111301
POPTR_002G208400v3
-32.99
LOC7482358
myb-related protein 2
7482358
POPTR_013G060200v3
-32.97
LOC18102024
heavy metal-associated isoprenylated plant protein 16
18102024
POPTR_009G048300v3
-32.87
LOC7486494
probable LRR receptor-like serine/threonine-protein kinase At1g53440
7486494
POPTR_016G092700v3
-32.77
LOC112326113
36.4 kDa proline-rich protein-like
112326113
POPTR_T162900v3
-32.68
LOC7469660
pathogenesis-related protein 1B
7469660
POPTR_009G083000v3
-32.55
LOC18099742
36.4 kDa proline-rich protein
18099742
POPTR_006G008500v3
-32.40
LOC18105965
uncharacterized LOC18105965
18105965
POPTR_015G119800v3
-32.36
LOC18101489
uncharacterized LOC18101489
18101489
-32.31
LOC7465161
expansin-A8
7465161
POPTR_013G154700v3
-32.30
LOC7460537
cytochrome P450 78A5
7460537
POPTR_001G054800v3
-32.25
LOC18104342
metalloendoproteinase 1
18104342
POPTR_013G100400v3
-32.03
LOC7473221
galactinol synthase 1
7473221
POPTR_008G189400v3
-32.01
LOC7469203
pathogen-related protein
7469203
POPTR_005G188300v3
-31.91
LOC112325907
protein JINGUBANG-like
112325907
POPTR_T124000v3
-31.84
LOC7453712
36.4 kDa proline-rich protein
7453712
POPTR_016G015500v3
-31.79
LOC7459236
expansin-A8
7459236
POPTR_019G057500v3
-31.74
LOC112326567
extensin-2
112326567
-31.73
LOC7472750
homeobox protein BEL1 homolog
7472750
POPTR_001G100800v3
-31.70
LOC7469204
pathogen-related protein
7469204
POPTR_005G188400v3
-31.70
LOC7456620
omega-hydroxypalmitate O-feruloyl transferase
7456620
POPTR_015G100800v3
-31.51
LOC18094599
ethylene-responsive transcription factor ERF039
18094599
POPTR_001G155700v3
-31.44
LOC7492797
uncharacterized LOC7492797
7492797
POPTR_014G102500v3
-31.20
LOC7493563
cysteine-rich repeat secretory protein 60
7493563
POPTR_004G086000v3
-31.12
LOC7479183
ABC transporter G family member 11
7479183
POPTR_005G073100v3
-31.10
LOC7489433
uncharacterized LOC7489433
7489433
POPTR_018G104500v3
-31.03
LOC18101639
protein SIEVE ELEMENT OCCLUSION B
18101639
POPTR_008G183200v3
-31.00
LOC7484402
probable (S)-N-methylcoclaurine 3'-hydroxylase isozyme 2
7484402
POPTR_012G136600v3
-30.97
LOC7453588
myb-related protein 2
7453588
POPTR_019G032700v3
-30.89
LOC7460667
myb family transcription factor APL
7460667
POPTR_008G081800v3
-30.82
LOC7496463
uncharacterized protein At1g08160
7496463
POPTR_009G003800v3
-30.40
LOC7481790
protein PHLOEM PROTEIN 2-LIKE A9
7481790
POPTR_015G120200v3
-30.40
LOC7468488
transcription factor IBH1
7468488
POPTR_014G149800v3
-30.39
LOC7462444
crocetin glucosyltransferase, chloroplastic
7462444
POPTR_002G236400v3
-30.37
LOC7464039
organ-specific protein S2
7464039
POPTR_009G114700v3
-30.31
LOC7471699
heavy metal-associated isoprenylated plant protein 47
7471699
POPTR_001G468500v3
-30.29
LOC7475804
gibberellin-regulated protein 9
7475804
POPTR_019G083900v3
-30.14
LOC7479851
probable pectate lyase 13
7479851
POPTR_008G032700v3
-30.13
LOC112324789
berberine bridge enzyme-like 8
112324789
POPTR_001G462400v3
-30.10
LOC7460733
protein JINGUBANG
7460733
POPTR_010G050900v3
-30.09
LOC18099182
thaumatin-like protein 1
18099182
POPTR_005G112700v3
-30.08
LOC7484414
uncharacterized LOC7484414
7484414
POPTR_012G085800v3
-29.96
LOC7492280
ethylene-responsive transcription factor ERF017
7492280
POPTR_006G218200v3
-29.91
LOC112326657
glycine-rich cell wall structural protein 1.8-like
112326657
POPTR_001G141800v3
-29.85
LOC18107565
uncharacterized LOC18107565
18107565
POPTR_018G002700v3
-29.77
LOC7488717
mitoferrin
7488717
POPTR_016G125200v3
-29.68
LOC7488343
lysine histidine transporter-like 6
7488343
POPTR_008G118000v3
-29.63
LOC7456777
uncharacterized LOC7456777
7456777
POPTR_004G048000v3
-29.43
LOC18109666
cytochrome P450 81D11
18109666
POPTR_014G020600v3
-29.42
LOC7482091
jacalin-related lectin 19
7482091
POPTR_012G140000v3
-29.23
LOC7479079
kirola
7479079
POPTR_004G020000v3
-29.13
LOC7473898
cationic amino acid transporter 1
7473898
POPTR_013G030900v3
-29.06
LOC7459548
acid phosphatase 1
7459548
POPTR_002G257700v3
-28.89
LOC112325189
metallothionein-like protein type 3
112325189
POPTR_001G400100v3
-28.88
LOC18107140
NAC domain-containing protein 83
18107140
POPTR_017G063300v3
-28.78
LOC7491921
probable serine/threonine-protein kinase PBL15
7491921
POPTR_003G105400v3
-28.71
LOC7473193
transcription factor HBI1
7473193
POPTR_007G023600v3
-28.67
LOC7463179
probable calcium-binding protein CML29
7463179
POPTR_002G088500v3
-28.60
LOC112326660
glycine-rich cell wall structural protein 1.8-like
112326660
POPTR_001G141700v3
-28.46
LOC7463021
protein trichome birefringence-like 43
7463021
POPTR_004G135600v3
-28.45
LOC7461315
protein SIEVE ELEMENT OCCLUSION B
7461315
POPTR_017G071000v3
-28.30
LOC18101860
monothiol glutaredoxin-S2
18101860
POPTR_008G214600v3
-28.21
LOC7496955
O-glucosyltransferase rumi homolog
7496955
POPTR_014G081600v3
-28.18
LOC7460357
probable 2-oxoglutarate-dependent dioxygenase At5g05600
7460357
POPTR_016G117100v3
-28.10
LOC18105712
zinc finger protein CONSTANS-LIKE 6
18105712
POPTR_015G054600v3
-28.10
LOC7461652
probable sucrose-phosphate synthase 3
7461652
POPTR_001G317600v3
-28.09
LOC18099678
jacalin-related lectin 3
18099678
POPTR_005G232400v3
-28.02
Lower 100 Genes
Symbol
Function*
Entrez Gene ID*
Other ID
PC
LOC7459521
glycine-rich protein 5
7459521
POPTR_002G252400v3
-35.41
LOC18104130
glycine-rich protein DOT1
18104130
POPTR_013G062100v3
-31.83
LOC18104132
cold-shock protein CS120
18104132
POPTR_013G062300v3
-29.98
LOC7485828
glycine-rich cell wall structural protein
7485828
POPTR_010G146200v3
-27.24
LOC7458168
acid beta-fructofuranosidase 2, vacuolar
7458168
POPTR_003G126300v3
-26.64
LOC7472348
epidermis-specific secreted glycoprotein EP1
7472348
POPTR_011G110000v3
-25.27
LOC7478511
glucan endo-1,3-beta-glucosidase
7478511
POPTR_001G255100v3
-25.02
LOC7483567
dormancy-associated protein homolog 4
7483567
POPTR_003G070500v3
-24.99
LOC7464314
homeobox-leucine zipper protein ATHB-12
7464314
POPTR_012G023700v3
-24.91
LOC7454532
uncharacterized LOC7454532
7454532
POPTR_012G094400v3
-24.86
LOC7494463
uncharacterized LOC7494463
7494463
POPTR_008G061700v3
-24.76
LOC18095468
polyphenol oxidase, chloroplastic
18095468
POPTR_001G388900v3
-24.09
LOC7472351
epidermis-specific secreted glycoprotein EP1
7472351
POPTR_011G110500v3
-23.78
LOC7453944
GATA transcription factor 4
7453944
POPTR_002G142800v3
-23.63
LOC18095889
thioredoxin-like protein CXXS1
18095889
POPTR_001G416500v3
-23.27
LOC7485052
endogenous alpha-amylase/subtilisin inhibitor
7485052
POPTR_007G111500v3
-23.02
LOC18096165
protodermal factor 1
18096165
POPTR_002G060800v3
-22.75
LOC7464794
protodermal factor 1
7464794
POPTR_005G200900v3
-22.68
LOC112327940
uncharacterized LOC112327940
112327940
-22.47
LOC18097308
miraculin
18097308
POPTR_004G000400v3
-22.29
LOC18106964
rust resistance kinase Lr10
18106964
POPTR_017G034700v3
-22.10
LOC18100581
class V chitinase
18100581
POPTR_006G188400v3
-21.95
LOC7471119
putative beta-D-xylosidase
7471119
POPTR_008G108100v3
-21.67
LOC7486082
endogenous alpha-amylase/subtilisin inhibitor
7486082
POPTR_007G111800v3
-21.66
LOC18099013
uncharacterized LOC18099013
18099013
POPTR_005G058200v3
-21.57
LOC7497590
beta-galactosidase
7497590
POPTR_006G144500v3
-21.49
LOC7484381
low-temperature-induced 65 kDa protein
7484381
POPTR_012G141300v3
-21.41
LOC7497320
uncharacterized LOC7497320
7497320
POPTR_014G014500v3
-21.40
LOC7472135
chaperone protein dnaJ 11, chloroplastic
7472135
POPTR_009G131800v3
-21.23
LOC7496123
zeatin O-glucosyltransferase
7496123
POPTR_006G048200v3
-21.02
LOC7461695
kunitz trypsin inhibitor 2
7461695
POPTR_001G309900v3
-21.00
LOC7470970
photosystem II 10 kDa polypeptide, chloroplastic
7470970
POPTR_011G142300v3
-20.90
LOC7498090
basic endochitinase CHB4
7498090
POPTR_019G094100v3
-20.90
LOC7485479
ethylene-responsive transcription factor WIN1
7485479
POPTR_006G069400v3
-20.77
LOC7497748
uncharacterized LOC7497748
7497748
POPTR_007G003600v3
-20.75
LOC18104131
putative glycine-rich cell wall structural protein 1
18104131
POPTR_013G062200v3
-20.75
LOC7478518
protein GAST1
7478518
POPTR_001G254100v3
-20.71
LOC7471192
glycine-rich protein 5
7471192
POPTR_002G252200v3
-20.62
LOC7490642
chaperone protein dnaJ 11, chloroplastic
7490642
POPTR_002G020700v3
-20.61
LOC7488366
transcription factor MYB62
7488366
POPTR_008G122100v3
-20.48
LOC7470586
uncharacterized LOC7470586
7470586
POPTR_001G190700v3
-20.45
LOC7454978
photosystem II 10 kDa polypeptide, chloroplastic
7454978
POPTR_011G142200v3
-20.32
LOC7465525
acid beta-fructofuranosidase
7465525
POPTR_003G112600v3
-20.30
LOC7453636
chaperone protein dnaJ 11, chloroplastic
7453636
POPTR_004G172300v3
-20.21
LOC7477039
4-coumarate--CoA ligase-like 9
7477039
POPTR_010G057000v3
-20.10
LOC7485462
probable galactinol--sucrose galactosyltransferase 6
7485462
POPTR_006G065700v3
-19.84
LOC7456810
stem-specific protein TSJT1
7456810
POPTR_004G040600v3
-19.78
LOC7488407
MLP-like protein 328
7488407
POPTR_008G131300v3
-19.78
LOC18095762
photosystem II 10 kDa polypeptide, chloroplastic
18095762
POPTR_001G438800v3
-19.72
LOC7476361
GDSL esterase/lipase At5g45950
7476361
POPTR_004G051900v3
-19.61
LOC7477401
uncharacterized LOC7477401
7477401
POPTR_004G044300v3
-19.38
LOC7485051
alpha-amylase/subtilisin inhibitor
7485051
POPTR_007G111600v3
-19.25
LOC7454691
malate synthase, glyoxysomal
7454691
POPTR_015G092000v3
-19.24
LOC7491425
light-regulated protein 1, chloroplastic
7491425
POPTR_001G066400v3
-19.00
LOC7469178
NAD(P)H-quinone oxidoreductase subunit M, chloroplastic
7469178
POPTR_005G183000v3
-18.93
LOC18102998
stem-specific protein TSJT1
18102998
POPTR_011G049900v3
-18.78
LOC18095082
leucine-rich repeat extensin-like protein 3
18095082
POPTR_001G260200v3
-18.68
LOC7464286
thylakoid lumenal 17.4 kDa protein, chloroplastic
7464286
POPTR_012G018100v3
-18.57
LOC18097900
proline-rich protein 4
18097900
POPTR_004G168600v3
-18.51
LOC18106572
uncharacterized oxidoreductase At4g09670
18106572
POPTR_017G137300v3
-18.46
LOC7454719
protein SHOOT GRAVITROPISM 5
7454719
POPTR_015G096500v3
-18.41
LOC7482822
ethylene-responsive transcription factor ERF113
7482822
POPTR_001G067600v3
-18.35
LOC18095611
stem-specific protein TSJT1
18095611
POPTR_001G403000v3
-18.25
LOC18106247
NADPH-dependent aldo-keto reductase, chloroplastic
18106247
POPTR_016G102100v3
-18.10
LOC7490956
metallothiol transferase FosB
7490956
POPTR_001G171600v3
-18.09
LOC7470729
oleosin 16 kDa
7470729
POPTR_006G234900v3
-18.07
LOC7460796
repetitive proline-rich cell wall protein
7460796
POPTR_010G072200v3
-17.98
LOC18102048
probable mannitol dehydrogenase
18102048
POPTR_009G063300v3
-17.96
LOC7493352
EG45-like domain containing protein
7493352
POPTR_018G098200v3
-17.92
LOC7488594
cysteine proteinase inhibitor B
7488594
POPTR_002G235800v3
-17.85
LOC7454859
asparagine synthetase [glutamine-hydrolyzing] 1
7454859
POPTR_009G072900v3
-17.77
LOC7461739
uncharacterized LOC7461739
7461739
POPTR_002G152600v3
-17.70
LOC7477614
zinc-finger homeodomain protein 5
7477614
POPTR_005G227900v3
-17.67
LOC7496429
small heat shock protein, chloroplastic
7496429
POPTR_012G022400v3
-17.63
LOC7456215
uncharacterized LOC7456215
7456215
POPTR_001G334500v3
-17.44
LOC18108499
endochitinase EP3
18108499
POPTR_019G093900v3
-17.35
LOC7471736
mitotic spindle checkpoint protein BUBR1
7471736
POPTR_002G002900v3
-17.34
LOC7474182
homocysteine S-methyltransferase 3
7474182
POPTR_010G083600v3
-17.34
LOC7461601
uncharacterized protein At4g14100
7461601
POPTR_T094000v3
-17.25
LOC7454940
uncharacterized LOC7454940
7454940
POPTR_006G087700v3
-17.23
LOC7459996
membrane protein PM19L
7459996
POPTR_010G064200v3
-17.21
LOC7491108
uncharacterized LOC7491108
7491108
POPTR_009G019300v3
-17.21
LOC7497095
endochitinase PR4
7497095
POPTR_019G094000v3
-17.18
LOC7462344
stem-specific protein TSJT1
7462344
POPTR_011G122100v3
-17.11
LOC7484749
isochorismate synthase, chloroplastic
7484749
POPTR_012G070000v3
-17.10
LOC7469550
UDP-glycosyltransferase 74F2
7469550
POPTR_007G140500v3
-17.10
LOC7453998
uncharacterized LOC7453998
7453998
-17.05
LOC7494685
uncharacterized LOC7494685
7494685
POPTR_005G249700v3
-17.04
LOC18105288
caffeoylshikimate esterase
18105288
POPTR_014G129000v3
-17.00
LOC7496687
late embryogenesis abundant protein Lea5
7496687
POPTR_010G012100v3
-16.89
LOC7454855
mitogen-activated protein kinase kinase kinase 18
7454855
POPTR_009G073200v3
-16.83
LOC112327934
ricin-like
112327934
POPTR_006G027800v3
-16.78
LOC7470571
photosynthetic NDH subunit of subcomplex B 3, chloroplastic
7470571
POPTR_001G186800v3
-16.78
LOC7466252
non-specific lipid-transfer protein 1
7466252
POPTR_016G135400v3
-16.71
LOC7487723
GDSL esterase/lipase At5g33370
7487723
POPTR_013G051100v3
-16.71
LOC7492427
glu S.griseus protease inhibitor
7492427
POPTR_010G075400v3
-16.57
LOC18103898
peptidyl-prolyl cis-trans isomerase FKBP17-1, chloroplastic
18103898
POPTR_012G119800v3
-16.55
LOC7495323
uncharacterized protein ycf23
7495323
POPTR_011G080900v3
-16.54
LOC7484850
transcription factor MYB108
7484850
POPTR_008G101400v3
-16.53
LOC18095888
photosynthetic NDH subunit of lumenal location 3, chloroplastic
18095888
POPTR_001G416400v3
-16.52
Lower 100 Genes
Symbol
Function*
Entrez Gene ID*
Other ID
PC
LOC7494393
22.0 kDa class IV heat shock protein
7494393
POPTR_013G089200v3
-44.91
LOC7496429
small heat shock protein, chloroplastic
7496429
POPTR_012G022400v3
-42.90
LOC18094241
heat shock 70 kDa protein
18094241
POPTR_001G042600v3
-42.78
LOC7479678
gibberellin-regulated protein 1
7479678
POPTR_002G022600v3
-38.04
LOC18096754
protein HOTHEAD
18096754
POPTR_003G039000v3
-32.63
LOC7455411
probable pectinesterase 53
7455411
POPTR_014G117100v3
-32.35
LOC18106465
heat shock protein 83
18106465
POPTR_017G146600v3
-31.88
LOC7463845
cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1
7463845
POPTR_001G265300v3
-31.23
LOC18097975
18.1 kDa class I heat shock protein
18097975
-30.95
LOC7465124
osmotin-like protein
7465124
POPTR_001G237600v3
-30.06
LOC7485724
transcription factor MYB48
7485724
POPTR_001G235500v3
-29.27
LOC7485270
EG45-like domain containing protein
7485270
POPTR_006G179300v3
-29.10
LOC7454971
class I heat shock protein
7454971
POPTR_006G093500v3
-28.90
LOC112326657
glycine-rich cell wall structural protein 1.8-like
112326657
POPTR_001G141800v3
-28.77
LOC7484902
uncharacterized LOC7484902
7484902
POPTR_012G111000v3
-28.58
LOC18104827
isoflavone 2'-hydroxylase
18104827
POPTR_014G021700v3
-28.50
LOC18098895
flavonoid 3'-monooxygenase
18098895
POPTR_005G045800v3
-27.68
LOC7482258
zinc finger protein GIS3
7482258
POPTR_010G140700v3
-27.57
LOC18094242
heat shock 70 kDa protein
18094242
POPTR_001G042700v3
-27.54
LOC112328776
uncharacterized LOC112328776
112328776
-27.39
LOC7473428
1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 1
7473428
POPTR_008G157400v3
-27.38
LOC18110455
patatin-like protein 2
18110455
POPTR_019G015100v3
-27.36
LOC7475781
carboxymethylenebutenolidase homolog
7475781
POPTR_019G079000v3
-27.26
LOC18104880
uncharacterized LOC18104880
18104880
POPTR_014G027800v3
-27.22
LOC18102943
(3S,6E)-nerolidol synthase 1
18102943
POPTR_011G032300v3
-27.06
LOC7462237
17.9 kDa class II heat shock protein
7462237
POPTR_006G223900v3
-27.04
LOC7465527
protein YABBY 4
7465527
POPTR_003G112800v3
-27.04
LOC7475116
26.5 kDa heat shock protein, mitochondrial
7475116
POPTR_001G192600v3
-26.81
LOC7487006
protein NRT1/ PTR FAMILY 5.4
7487006
POPTR_001G027100v3
-26.68
LOC7492467
WAT1-related protein At1g43650
7492467
POPTR_005G192100v3
-26.58
LOC18102765
putative glycine-rich cell wall structural protein 1
18102765
POPTR_010G230400v3
-26.37
LOC7470074
36.4 kDa proline-rich protein
7470074
POPTR_018G126000v3
-26.14
LOC7475947
G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290
7475947
POPTR_010G025700v3
-25.89
LOC7469845
bark storage protein A
7469845
POPTR_019G050200v3
-25.82
LOC7472606
UDP-glycosyltransferase 83A1
7472606
POPTR_004G123500v3
-25.37
LOC18108150
patatin-like protein 4
18108150
POPTR_T050800v3
-25.14
LOC7464041
BURP domain protein USPL1
7464041
POPTR_009G114300v3
-24.94
LOC7479202
23.6 kDa heat shock protein, mitochondrial
7479202
POPTR_003G109200v3
-24.94
LOC7493404
NADP-dependent glyceraldehyde-3-phosphate dehydrogenase
7493404
POPTR_018G109700v3
-24.92
LOC7459174
probable glutathione S-transferase
7459174
POPTR_001G437400v3
-24.85
LOC7456665
uncharacterized LOC7456665
7456665
POPTR_015G109100v3
-24.85
LOC7467387
18.1 kDa class I heat shock protein
7467387
POPTR_009G049900v3
-24.75
LOC7475946
G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290
7475946
POPTR_010G025800v3
-24.68
LOC7498011
G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290
7498011
POPTR_010G025500v3
-24.45
LOC18098217
hybrid signal transduction histidine kinase M
18098217
POPTR_004G212900v3
-24.42
LOC7470544
uncharacterized LOC7470544
7470544
POPTR_001G204300v3
-24.36
LOC7480952
cytochrome P450 71B36
7480952
POPTR_008G184400v3
-24.33
LOC7465518
14 kDa proline-rich protein DC2.15
7465518
POPTR_003G111400v3
-24.30
LOC7469930
putative axial regulator YABBY 2
7469930
POPTR_016G067300v3
-24.28
LOC7468108
uncharacterized LOC7468108
7468108
POPTR_010G147200v3
-24.02
LOC7493909
NAC domain-containing protein 71
7493909
POPTR_013G079700v3
-23.88
LOC18094550
cationic amino acid transporter 6, chloroplastic
18094550
POPTR_001G150700v3
-23.73
LOC18104420
NAD(P)H-quinone oxidoreductase subunit T, chloroplastic
18104420
POPTR_013G109000v3
-23.69
LOC18106628
15.7 kDa heat shock protein, peroxisomal
18106628
POPTR_017G130700v3
-23.68
LOC7471940
abscisic acid 8'-hydroxylase 1
7471940
POPTR_002G033000v3
-23.66
LOC18100303
ethylene-responsive transcription factor ERF017
18100303
POPTR_006G138800v3
-23.36
LOC7467676
class I heat shock protein
7467676
POPTR_T125900v3
-23.20
LOC112326660
glycine-rich cell wall structural protein 1.8-like
112326660
POPTR_001G141700v3
-23.02
LOC7458915
butyrate--CoA ligase AAE11, peroxisomal
7458915
POPTR_016G034800v3
-22.97
LOC7472734
cell division control protein 48 homolog C
7472734
POPTR_001G097600v3
-22.91
LOC7494528
heat shock protein 83
7494528
POPTR_004G073600v3
-22.91
LOC18097063
endoglucanase 1
18097063
POPTR_003G147600v3
-22.86
LOC7477819
transcription factor MYC4
7477819
POPTR_001G083500v3
-22.69
LOC7466474
uncharacterized LOC7466474
7466474
POPTR_002G084600v3
-22.65
LOC18109033
18.1 kDa class I heat shock protein
18109033
-22.56
LOC18098202
ubiquitin-like protein 5
18098202
POPTR_004G211600v3
-22.48
LOC7493921
uncharacterized LOC7493921
7493921
POPTR_013G085300v3
-22.42
LOC112326528
uncharacterized LOC112326528
112326528
-22.35
LOC7477210
transcription factor HY5-like
7477210
POPTR_010G004200v3
-22.34
LOC7482599
cytochrome P450 71A1
7482599
POPTR_016G137600v3
-22.31
LOC7463577
protochlorophyllide-dependent translocon component 52, chloroplastic
7463577
POPTR_003G219000v3
-22.07
LOC112328045
uncharacterized LOC112328045
112328045
-22.02
LOC18104124
uncharacterized LOC18104124
18104124
POPTR_013G059500v3
-21.92
LOC7470104
sodium transporter HKT1
7470104
POPTR_018G132200v3
-21.91
LOC18097977
18.1 kDa class I heat shock protein
18097977
POPTR_004G187200v3
-21.82
LOC7485893
uncharacterized LOC7485893
7485893
-21.82
LOC7454912
WAT1-related protein At2g37460
7454912
POPTR_006G082700v3
-21.74
LOC18100161
acylphosphatase
18100161
-21.66
LOC7460940
protein FAM32A-like
7460940
POPTR_005G174400v3
-21.64
LOC7481611
18.1 kDa class I heat shock protein
7481611
POPTR_010G175200v3
-21.64
LOC7494466
18.1 kDa class I heat shock protein
7494466
POPTR_008G062300v3
-21.60
LOC7485716
uncharacterized LOC7485716
7485716
POPTR_001G237300v3
-21.57
LOC18104869
subtilisin-like protease SBT1.9
18104869
POPTR_014G026500v3
-21.46
LOC7463460
probable LRR receptor-like serine/threonine-protein kinase At3g47570
7463460
POPTR_010G228300v3
-21.39
LOC7470743
carotenoid cleavage dioxygenase 8 homolog B, chloroplastic
7470743
POPTR_006G238500v3
-21.32
LOC7479985
cytochrome P450 94A1
7479985
POPTR_002G042200v3
-21.32
LOC7474945
cytochrome P450 94C1
7474945
POPTR_009G145400v3
-21.21
LOC7496589
linoleate 13S-lipoxygenase 2-1, chloroplastic
7496589
POPTR_017G046200v3
-21.17
LOC7463075
vignain
7463075
POPTR_015G087400v3
-20.99
LOC7455674
glucan endo-1,3-beta-glucosidase 7
7455674
POPTR_014G182000v3
-20.99
LOC7455941
pathogen-related protein
7455941
POPTR_011G108900v3
-20.99
LOC18102191
18.1 kDa class I heat shock protein
18102191
POPTR_009G147900v3
-20.90
LOC7483571
17.4 kDa class III heat shock protein
7483571
POPTR_003G071100v3
-20.87
LOC7458129
ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
7458129
POPTR_010G200500v3
-20.81
LOC18098005
putative phospholipid:diacylglycerol acyltransferase 2
18098005
POPTR_004G190100v3
-20.80
LOC18100302
ethylene-responsive transcription factor ERF017
18100302
POPTR_006G138700v3
-20.80
LOC7470735
lachrymatory-factor synthase
7470735
POPTR_006G237100v3
-20.73
LOC18094704
protein TIFY 10A
18094704
POPTR_001G166200v3
-20.71
LOC7494712
glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic
7494712
POPTR_005G254100v3
-20.70
LOC7470027
fructose-bisphosphate aldolase 1, chloroplastic
7470027
POPTR_004G162400v3
-20.67
Lower 100 Genes
Symbol
Function*
Entrez Gene ID*
Other ID
PC
LOC18104338
bark storage protein A
18104338
POPTR_013G100800v3
-39.55
LOC18104339
bark storage protein A
18104339
POPTR_013G100700v3
-36.33
LOC18107353
leucine-rich repeat extensin-like protein 3
18107353
POPTR_017G100600v3
-33.75
LOC7470239
uncharacterized LOC7470239
7470239
POPTR_004G051500v3
-32.44
LOC112328050
36.4 kDa proline-rich protein-like
112328050
POPTR_006G008300v3
-29.63
LOC18104481
sucrose transport protein SUC8
18104481
POPTR_013G115200v3
-27.95
LOC7495765
TATA-binding protein-associated factor 2N
7495765
POPTR_006G251300v3
-27.73
LOC18097680
proline-rich protein 4
18097680
POPTR_004G114400v3
-26.49
LOC18104906
uncharacterized LOC18104906
18104906
POPTR_014G030700v3
-26.01
LOC7463760
flavonoid 3'-monooxygenase
7463760
POPTR_018G051300v3
-25.96
LOC112328649
uncharacterized LOC112328649
112328649
-25.55
LOC7478832
putative indole-3-acetic acid-amido synthetase GH3.9
7478832
POPTR_002G206400v3
-25.14
LOC7457966
glutaredoxin-C11
7457966
POPTR_014G134200v3
-24.94
LOC7480791
putative dynamin-related protein 4A
7480791
POPTR_003G024900v3
-24.78
LOC7462890
phosphatidylserine decarboxylase proenzyme 3
7462890
POPTR_002G127000v3
-24.45
LOC112327364
formin-2-like
112327364
POPTR_004G114300v3
-24.07
LOC18100050
protein SCARECROW
18100050
POPTR_006G114200v3
-23.84
LOC18100462
probable RNA-dependent RNA polymerase 5
18100462
POPTR_006G164400v3
-23.73
LOC7472673
3-oxo-Delta(4,5)-steroid 5-beta-reductase
7472673
POPTR_002G120700v3
-23.72
LOC7462826
protein SUPPRESSOR OF GENE SILENCING 3 homolog
7462826
POPTR_003G188100v3
-23.49
LOC7496106
uncharacterized LOC7496106
7496106
POPTR_006G045300v3
-23.41
LOC7473878
protein DMP10
7473878
POPTR_013G027200v3
-23.08
LOC18100331
flavonoid 3'-monooxygenase
18100331
POPTR_006G141400v3
-23.06
LOC18095305
gibberellin-regulated protein 14
18095305
POPTR_001G350600v3
-22.92
LOC7455365
NDR1/HIN1-like protein 12
7455365
POPTR_014G106100v3
-22.90
LOC7479079
kirola
7479079
POPTR_004G020000v3
-22.83
LOC7467972
thaumatin-like protein 1
7467972
POPTR_001G220900v3
-22.39
LOC18103683
transcription repressor KAN1
18103683
POPTR_012G042100v3
-22.39
LOC7461263
MLP-like protein 28
7461263
POPTR_017G051100v3
-22.34
LOC7475437
cell wall / vacuolar inhibitor of fructosidase 1
7475437
POPTR_010G063000v3
-22.24
LOC18111301
monothiol glutaredoxin-S9
18111301
POPTR_002G208400v3
-22.12
LOC18099453
non-specific lipid-transfer protein 2
18099453
-22.00
LOC7464012
protein CASPARIAN STRIP INTEGRITY FACTOR 1
7464012
POPTR_009G119900v3
-21.57
LOC7470074
36.4 kDa proline-rich protein
7470074
POPTR_018G126000v3
-21.52
LOC7457876
tetraspanin-6
7457876
POPTR_008G041600v3
-21.41
LOC7486086
ankyrin repeat-containing protein ITN1
7486086
POPTR_007G110000v3
-21.28
LOC7454690
uncharacterized LOC7454690
7454690
POPTR_015G091900v3
-21.18
LOC7477203
late embryogenesis abundant protein D-29
7477203
POPTR_010G002600v3
-21.16
LOC18097400
beta-glucosidase 46
18097400
POPTR_004G019300v3
-21.15
LOC7485290
protein SMAX1-LIKE 3
7485290
POPTR_006G204500v3
-20.81
LOC7471481
uncharacterized LOC7471481
7471481
POPTR_008G146500v3
-20.77
LOC7491733
protein SHORT-ROOT
7491733
POPTR_007G132000v3
-20.58
LOC7468989
glucan endo-1,3-beta-glucosidase, basic isoform
7468989
POPTR_016G057600v3
-20.49
LOC18099825
uncharacterized LOC18099825
18099825
POPTR_006G042300v3
-20.46
LOC7481846
subtilisin-like protease SBT1.3
7481846
POPTR_015G133800v3
-20.44
LOC112324670
butyrate--CoA ligase AAE11, peroxisomal-like
112324670
POPTR_017G138400v3
-20.44
LOC7460785
wall-associated receptor kinase-like 10
7460785
POPTR_010G040500v3
-20.43
LOC7476404
probable LRR receptor-like serine/threonine-protein kinase At4g37250
7476404
POPTR_005G142300v3
-20.35
LOC7482588
non-specific lipid-transfer protein 1
7482588
POPTR_016G135800v3
-20.29
LOC18104130
glycine-rich protein DOT1
18104130
POPTR_013G062100v3
-20.23
LOC18095006
AAA-ATPase At4g25835
18095006
POPTR_001G231200v3
-20.21
LOC112324098
uncharacterized LOC112324098
112324098
-20.08
LOC18094781
uncharacterized LOC18094781
18094781
POPTR_001G188900v3
-20.06
LOC7462301
dehydration-responsive element-binding protein 3
7462301
POPTR_006G238600v3
-19.97
LOC7478165
dynamin-related protein 4C
7478165
POPTR_003G024800v3
-19.95
LOC18103438
probable glutathione S-transferase parC
18103438
POPTR_011G140600v3
-19.80
LOC7479222
21 kDa protein
7479222
POPTR_003G113700v3
-19.79
LOC7483606
probable LRR receptor-like serine/threonine-protein kinase At1g29720
7483606
POPTR_011G075400v3
-19.77
LOC18094669
pectinesterase
18094669
POPTR_001G162500v3
-19.73
LOC112328379
uncharacterized LOC112328379
112328379
-19.71
LOC112328875
uncharacterized LOC112328875
112328875
-19.70
LOC112324099
uncharacterized LOC112324099
112324099
-19.69
LOC7461315
protein SIEVE ELEMENT OCCLUSION B
7461315
POPTR_017G071000v3
-19.62
LOC112327921
uncharacterized LOC112327921
112327921
-19.57
LOC7485454
cation/H(+) antiporter 20
7485454
POPTR_006G054700v3
-19.52
LOC18104336
bark storage protein B
18104336
POPTR_013G101000v3
-19.52
LOC18103796
protein SIEVE ELEMENT OCCLUSION B
18103796
POPTR_012G090400v3
-19.51
LOC112325615
uncharacterized LOC112325615
112325615
-19.49
LOC7456784
squamosa promoter-binding-like protein 3
7456784
POPTR_004G046700v3
-19.49
LOC18099678
jacalin-related lectin 3
18099678
POPTR_005G232400v3
-19.44
LOC18107608
putative GATA transcription factor 22
18107608
POPTR_018G053600v3
-19.27
LOC18108209
uncharacterized LOC18108209
18108209
POPTR_019G027100v3
-19.19
LOC7459521
glycine-rich protein 5
7459521
POPTR_002G252400v3
-19.17
LOC7463603
peroxidase A2
7463603
POPTR_003G214800v3
-19.13
LOC18095330
protein SIEVE ELEMENT OCCLUSION B
18095330
POPTR_001G340500v3
-19.13
LOC7489106
protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4
7489106
POPTR_011G156600v3
-19.11
LOC18104131
putative glycine-rich cell wall structural protein 1
18104131
POPTR_013G062200v3
-19.10
LOC7486891
protein SMAX1-LIKE 3
7486891
POPTR_008G017600v3
-19.08
LOC18110429
putative UPF0481 protein At3g02645
18110429
POPTR_003G208700v3
-18.91
LOC7464036
BURP domain-containing protein BNM2A
7464036
POPTR_009G114600v3
-18.87
LOC7476748
21 kDa protein
7476748
POPTR_015G128300v3
-18.80
LOC7490961
TATA-binding protein-associated factor 2N
7490961
POPTR_001G172700v3
-18.78
LOC7490311
probable copper-transporting ATPase HMA5
7490311
POPTR_001G105800v3
-18.75
LOC7465124
osmotin-like protein
7465124
POPTR_001G237600v3
-18.74
LOC7492407
CLAVATA3/ESR (CLE)-related protein 25
7492407
POPTR_010G039800v3
-18.73
LOC18100688
pectinesterase
18100688
POPTR_T148200v3
-18.67
LOC18096545
CLAVATA3/ESR (CLE)-related protein 41
18096545
POPTR_002G241300v3
-18.59
LOC7465409
zinc finger protein 1
7465409
POPTR_018G021400v3
-18.58
LOC7457887
salt stress-induced hydrophobic peptide ESI3
7457887
POPTR_008G044300v3
-18.57
LOC18104485
protein DETOXIFICATION 54
18104485
POPTR_013G115600v3
-18.56
LOC7486322
epoxide hydrolase A
7486322
POPTR_005G081000v3
-18.55
LOC7465518
14 kDa proline-rich protein DC2.15
7465518
POPTR_003G111400v3
-18.49
LOC7463179
probable calcium-binding protein CML29
7463179
POPTR_002G088500v3
-18.47
LOC18107806
pectinesterase
18107806
POPTR_001G162600v3
-18.40
LOC112328516
uncharacterized LOC112328516
112328516
-18.35
LOC7459093
probable transmembrane ascorbate ferrireductase 3
7459093
POPTR_010G102400v3
-18.33
LOC7463044
expansin-A10
7463044
POPTR_004G123200v3
-18.30
LOC7468487
probable pectinesterase/pectinesterase inhibitor 35
7468487
POPTR_014G149700v3
-18.27
LOC7467040
cytochrome P450 78A9
7467040
POPTR_001G083900v3
-18.25
LOC7454978
photosystem II 10 kDa polypeptide, chloroplastic
7454978
POPTR_011G142200v3
-18.25
Lower 100 Genes
Symbol
Function*
Entrez Gene ID*
Other ID
PC
ndhB
NADH dehydrogenase subunit 2
4929763
Poptr_cp094
-23.22
ycf2
Ycf2
4929768
Poptr_cp098
-23.06
LOC18104481
sucrose transport protein SUC8
18104481
POPTR_013G115200v3
-21.54
rbcL
ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
4929677
Poptr_cp030
-20.97
ndhB
NADH dehydrogenase subunit 2
4929721
Poptr_cp069
-20.88
rpoC1
RNA polymerase beta' subunit
4929644
Poptr_cp011
-20.83
Poptr_cpR019
tRNA-Val
4929673
Poptr_cpR019
-20.81
LOC112327602
uncharacterized LOC112327602
112327602
-20.66
LOC7491169
xyloglucan endotransglucosylase/hydrolase protein 31
7491169
POPTR_009G006600v3
-20.19
atpB
ATP synthase CF1 beta subunit
4929676
Poptr_cp029
-20.12
LOC112323823
DNA-directed RNA polymerase subunit beta-like
112323823
-20.05
petA
cytochrome f
4929683
Poptr_cp036
-20.01
ycf2
Ycf2
4929717
Poptr_cp066
-19.63
psbE
photosystem II protein V
4929687
Poptr_cp040
-19.29
LOC18105360
ATP synthase subunit a
18105360
POPTR_014G168000v3
-19.23
psaJ
photosystem I subunit IX
4929692
Poptr_cp043
-19.14
Poptr_cp018
hypothetical protein
4929657
Poptr_cp018
-19.12
Poptr_cpR041
tRNA-Ile
4929756
Poptr_cpR041
-19.01
psbA
photosystem II protein D1
4929629
Poptr_cp001
-18.92
LOC7489433
uncharacterized LOC7489433
7489433
POPTR_018G104500v3
-18.91
clpP
ATP-dependent Clp protease proteolytic subunit
4929698
Poptr_cp048
-18.86
psbJ
photosystem II protein J
4929684
Poptr_cp037
-18.84
rps12
ribosomal protein S12
4929696
Poptr_cp091
-18.78
ndhE
NADH dehydrogenase subunit 4L
4929742
Poptr_cp081
-18.58
LOC18101860
monothiol glutaredoxin-S2
18101860
POPTR_008G214600v3
-18.54
ccsA
CcsA
4929739
Poptr_cp078
-18.51
trnA
tRNA-Ala
4929729
Poptr_cpR028
-18.48
cemA
envelope membrane protein
4929682
Poptr_cp035
-18.46
rpoC2
RNA polymerase beta'' subunit
4929643
Poptr_cp010
-18.32
psaA
photosystem I P700 chlorophyll a apoprotein A1
4929663
Poptr_cp022
-18.29
LOC18095065
18.2 kDa class I heat shock protein
18095065
POPTR_001G254700v3
-18.21
ndhI
NADH dehydrogenase subunit I
4929744
Poptr_cp083
-18.03
rpl20
ribosomal protein L20
4929695
Poptr_cp046
-18.03
rps4
ribosomal protein S4
4929666
Poptr_cp024
-17.97
ndhK
NADH dehydrogenase subunit K
4929671
Poptr_cp026
-17.92
rpoB
RNA polymerase beta subunit
4929645
Poptr_cp012
-17.84
rps18
ribosomal protein S18
4929694
Poptr_cp045
-17.84
rpl2
ribosomal protein L2
4929771
Poptr_cp100
-17.78
rps12
ribosomal protein S12
4929628
Poptr_cp071
-17.75
atpE
ATP synthase CF1 epsilon subunit
4929675
Poptr_cp028
-17.68
rps7
ribosomal protein S7
4929722
Poptr_cp070
-17.67
LOC7464041
BURP domain protein USPL1
7464041
POPTR_009G114300v3
-17.55
LOC112326578
uncharacterized LOC112326578
112326578
-17.53
trnK
tRNA-Lys
4929630
Poptr_cpR002
-17.40
Poptr_cpR027
tRNA-Ile
4929727
Poptr_cpR027
-17.38
LOC18104336
bark storage protein B
18104336
POPTR_013G101000v3
-17.37
LOC7459902
protein GLUTAMINE DUMPER 5
7459902
POPTR_006G267900v3
-17.34
trnA
tRNA-Ala
4929755
Poptr_cpR040
-17.25
LOC18094550
cationic amino acid transporter 6, chloroplastic
18094550
POPTR_001G150700v3
-17.11
LOC18097015
36.4 kDa proline-rich protein
18097015
POPTR_003G111300v3
-17.01
ndhG
NADH dehydrogenase subunit 6
4929743
Poptr_cp082
-16.98
LOC18103031
uncharacterized LOC18103031
18103031
POPTR_011G053300v3
-16.94
LOC112327508
nicotianamine synthase-like
112327508
POPTR_005G017300v3
-16.92
ndhC
NADH dehydrogenase subunit 3
4929672
Poptr_cp027
-16.90
psaC
photosystem I subunit VII
4929741
Poptr_cp080
-16.89
psaB
photosystem I P700 chlorophyll a apoprotein A2
4929662
Poptr_cp021
-16.77
LOC7473268
luminal-binding protein 4
7473268
POPTR_013G018000v3
-16.63
LOC18097894
auxin-responsive protein SAUR24
18097894
POPTR_004G165300v3
-16.50
Poptr_cpR005
tRNA-Gly
4929636
Poptr_cpR005
-16.38
LOC18094242
heat shock 70 kDa protein
18094242
POPTR_001G042700v3
-16.29
LOC7492393
galactinol synthase 1
7492393
POPTR_010G042000v3
-16.19
ndhJ
NADH dehydrogenase subunit J
4929670
Poptr_cp025
-16.15
LOC18104619
uncharacterized LOC18104619
18104619
POPTR_013G129900v3
-16.08
LOC7459174
probable glutathione S-transferase
7459174
POPTR_001G437400v3
-16.06
rps7
ribosomal protein S7
4929762
Poptr_cp093
-15.86
LOC112325098
monothiol glutaredoxin-S2-like
112325098
POPTR_018G049400v3
-15.85
Poptr_cpR012
tRNA-Ser
4929656
Poptr_cpR012
-15.84
ycf4
photosystem I assembly protein Ycf4
4929681
Poptr_cp034
-15.83
LOC7492461
vacuolar iron transporter homolog 2
7492461
POPTR_005G190800v3
-15.71
LOC7475437
cell wall / vacuolar inhibitor of fructosidase 1
7475437
POPTR_010G063000v3
-15.60
LOC7463625
homeobox protein SBH1
7463625
POPTR_004G004700v3
-15.52
psbK
photosystem II protein K
4929633
Poptr_cp003
-15.45
petB
cytochrome b6
4929703
Poptr_cp053
-15.41
psbC
photosystem II 44 kDa protein
4929655
Poptr_cp017
-15.37
rps14
ribosomal protein S14
4929661
Poptr_cp020
-15.37
rpl33
ribosomal protein L33
4929693
Poptr_cp044
-15.30
LOC18108550
uncharacterized LOC18108550
18108550
POPTR_019G099600v3
-15.21
ycf3
photosystem I assembly protein Ycf3
4929664
Poptr_cp023
-15.18
ndhD
NADH dehydrogenase subunit 4
4929740
Poptr_cp079
-15.16
psbH
photosystem II protein H
4929702
Poptr_cp052
-15.15
LOC112327503
nicotianamine synthase-like
112327503
POPTR_005G014300v3
-15.13
psbD
photosystem II protein D2
4929654
Poptr_cp016
-15.12
LOC7494289
auxin-responsive protein SAUR50
7494289
POPTR_009G126000v3
-15.11
LOC112323706
small nucleolar RNA U3
112323706
-14.99
LOC7464037
uncharacterized LOC7464037
7464037
POPTR_009G114400v3
-14.93
LOC112323707
small nucleolar RNA U3
112323707
-14.91
LOC7487519
indole-3-acetate O-methyltransferase 1
7487519
POPTR_001G359000v3
-14.91
LOC112328887
uncharacterized LOC112328887
112328887
-14.88
LOC7463180
nitrate reductase [NADH]
7463180
POPTR_002G088600v3
-14.83
psaI
photosystem I subunit VIII
4929680
Poptr_cp033
-14.82
LOC18101857
monothiol glutaredoxin-S2
18101857
POPTR_008G214800v3
-14.77
ndhH
NADH dehydrogenase subunit 7
4929746
Poptr_cp085
-14.71
petD
cytochrome b6/f complex subunit IV
4929704
Poptr_cp054
-14.65
LOC7455905
protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10
7455905
POPTR_011G066400v3
-14.63
LOC7455621
F-box/kelch-repeat protein At1g15670
7455621
POPTR_006G196900v3
-14.61
LOC7455042
exopolyphosphatase PRUNE1
7455042
POPTR_011G153800v3
-14.59
LOC7468066
ammonium transporter 2
7468066
POPTR_006G102800v3
-14.57
LOC112325374
U1 spliceosomal RNA
112325374
-14.57
rps19
ribosomal protein S19
4929772
Poptr_cp101
-14.51
petG
cytochrome b6/f complex subunit V
4929689
Poptr_cp042
-14.51
Lower 100 Genes
Symbol
Function*
Entrez Gene ID*
Other ID
PC
LOC7496928
probable isoaspartyl peptidase/L-asparaginase 2
7496928
POPTR_014G022900v3
-25.34
LOC7468989
glucan endo-1,3-beta-glucosidase, basic isoform
7468989
POPTR_016G057600v3
-19.47
LOC7454948
L-ascorbate peroxidase, cytosolic
7454948
POPTR_006G089000v3
-17.79
LOC18104574
cytochrome P450 82G1
18104574
POPTR_013G125300v3
-17.29
LOC7465565
nodulation receptor kinase
7465565
POPTR_007G004700v3
-16.41
LOC7459891
uncharacterized LOC7459891
7459891
POPTR_018G130300v3
-15.78
LOC18108447
metalloendoproteinase 2-MMP
18108447
POPTR_019G073800v3
-15.77
LOC7484582
receptor-like protein kinase FERONIA
7484582
POPTR_017G097500v3
-15.61
LOC18110355
receptor-like protein kinase FERONIA
18110355
POPTR_017G097800v3
-15.33
LOC18108208
uncharacterized LOC18108208
18108208
POPTR_019G027000v3
-15.23
LOC7490721
heavy metal-associated isoprenylated plant protein 30
7490721
POPTR_001G452400v3
-15.02
LOC7462301
dehydration-responsive element-binding protein 3
7462301
POPTR_006G238600v3
-14.96
LOC7459174
probable glutathione S-transferase
7459174
POPTR_001G437400v3
-14.83
LOC18094040
omega-hydroxypalmitate O-feruloyl transferase
18094040
POPTR_001G128100v3
-14.64
LOC7472993
dirigent protein 23
7472993
POPTR_001G214600v3
-14.48
LOC18110625
uncharacterized LOC18110625
18110625
POPTR_019G028800v3
-14.44
LOC18094937
thaumatin-like protein 1
18094937
POPTR_001G221900v3
-14.37
LOC112324174
uncharacterized LOC112324174
112324174
-14.29
LOC18097897
60S ribosomal protein L23
18097897
POPTR_004G166200v3
-14.26
rpl2
ribosomal protein L2
4929714
Poptr_cp064
-14.25
LOC7456838
phenolic glucoside malonyltransferase 1
7456838
-14.23
LOC7458755
aldehyde dehydrogenase family 2 member C4
7458755
POPTR_018G075000v3
-14.09
LOC7484626
non-specific lipid-transfer protein 1
7484626
POPTR_006G108100v3
-14.08
LOC18102095
gallate 1-beta-glucosyltransferase
18102095
POPTR_009G095300v3
-14.02
LOC7462249
glutaredoxin-C6
7462249
POPTR_006G226900v3
-13.90
LOC7464826
protein DETOXIFICATION 41
7464826
POPTR_005G207500v3
-13.79
LOC7472470
non-specific lipid-transfer protein 1
7472470
POPTR_016G136000v3
-13.66
LOC18104485
protein DETOXIFICATION 54
18104485
POPTR_013G115600v3
-13.59
LOC18094720
putative receptor-like protein kinase At1g72540
18094720
POPTR_001G168000v3
-13.45
LOC7497272
cytochrome P450 78A3
7497272
POPTR_002G175200v3
-13.42
Poptr_cpR038
4929753
Poptr_cpR038
-13.32
LOC18094938
thaumatin-like protein 1
18094938
POPTR_001G221800v3
-13.12
LOC18104338
bark storage protein A
18104338
POPTR_013G100800v3
-13.10
LOC18103379
MLO-like protein 11
18103379
POPTR_011G121600v3
-13.04
LOC7488718
abscisic acid receptor PYL4
7488718
POPTR_016G125400v3
-13.01
LOC18108207
uncharacterized LOC18108207
18108207
POPTR_019G026900v3
-12.98
rpl2
ribosomal protein L2
4929771
Poptr_cp100
-12.87
LOC7490066
gallate 1-beta-glucosyltransferase
7490066
POPTR_009G095100v3
-12.74
LOC112325615
uncharacterized LOC112325615
112325615
-12.67
LOC18106624
glutamine synthetase cytosolic isozyme 1
18106624
POPTR_017G131100v3
-12.66
LOC7488106
dof zinc finger protein DOF3.6
7488106
POPTR_008G055100v3
-12.65
LOC7484367
protein DETOXIFICATION 35
7484367
POPTR_012G144900v3
-12.48
LOC18106059
anthocyanidin 3-O-glucosyltransferase 2
18106059
POPTR_016G017100v3
-12.46
LOC7477438
LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.4
7477438
POPTR_004G097100v3
-12.45
LOC18095169
serine carboxypeptidase-like 18
18095169
POPTR_001G291800v3
-12.45
LOC7466021
WD repeat-containing protein LWD1
7466021
POPTR_006G209000v3
-12.39
LOC18109505
uncharacterized LOC18109505
18109505
-12.38
LOC7458076
cytochrome P450 71A1
7458076
POPTR_012G090000v3
-12.37
LOC7483928
leucoanthocyanidin reductase
7483928
POPTR_008G116500v3
-12.33
LOC18096192
putative wall-associated receptor kinase-like 16
18096192
POPTR_002G076000v3
-12.10
LOC18109378
heavy metal-associated isoprenylated plant protein 30
18109378
POPTR_011G149500v3
-11.98
LOC112324367
cell surface glycoprotein 1-like
112324367
-11.93
LOC18098005
putative phospholipid:diacylglycerol acyltransferase 2
18098005
POPTR_004G190100v3
-11.90
LOC18110102
rust resistance kinase Lr10
18110102
POPTR_012G003100v3
-11.87
LOC7480382
probable carboxylesterase 18
7480382
POPTR_001G459400v3
-11.71
LOC18109602
putative receptor-like protein kinase At4g00960
18109602
POPTR_004G026300v3
-11.68
LOC7492298
transcription factor MYB114
7492298
POPTR_006G221200v3
-11.57
LOC7494275
aquaporin PIP1-1
7494275
POPTR_009G127900v3
-11.56
LOC7488587
dCTP pyrophosphatase 1
7488587
POPTR_002G235000v3
-11.52
LOC18110744
cytochrome P450 81D11
18110744
POPTR_T096600v3
-11.50
LOC18109964
uncharacterized LOC18109964
18109964
POPTR_T055700v3
-11.48
LOC7463201
uncharacterized LOC7463201
7463201
POPTR_002G092900v3
-11.46
LOC7487268
L-type lectin-domain containing receptor kinase IV.1
7487268
POPTR_006G088900v3
-11.46
LOC18108209
uncharacterized LOC18108209
18108209
POPTR_019G027100v3
-11.46
LOC7482588
non-specific lipid-transfer protein 1
7482588
POPTR_016G135800v3
-11.44
LOC112327231
DNA ligase 1-like
112327231
POPTR_004G206700v3
-11.43
LOC7465006
enolase-phosphatase E1
7465006
POPTR_T072500v3
-11.40
LOC112327707
5.8S ribosomal RNA
112327707
-11.35
LOC18105663
acidic endochitinase
18105663
POPTR_015G024100v3
-11.31
LOC7467597
glutathione S-transferase L3
7467597
POPTR_016G083500v3
-11.29
Poptr_cpR017
tRNA-Leu
4929668
Poptr_cpR017
-11.24
LOC7461821
transcription factor bHLH30
7461821
POPTR_002G105300v3
-11.22
LOC18102534
protein indeterminate-domain 5, chloroplastic
18102534
POPTR_010G099200v3
-11.21
LOC18102145
AAA-ATPase At3g50940
18102145
POPTR_T171900v3
-11.21
LOC7494558
cinnamoyl-CoA reductase-like SNL6
7494558
POPTR_004G105000v3
-11.19
LOC112323790
uncharacterized LOC112323790
112323790
-11.17
LOC18102584
uncharacterized LOC18102584
18102584
-11.16
LOC7475620
leucoanthocyanidin reductase
7475620
POPTR_015G050200v3
-11.14
LOC7465984
cinnamoyl-CoA reductase-like SNL6
7465984
POPTR_006G178700v3
-11.14
LOC18096734
ABC transporter C family member 8
18096734
POPTR_003G034700v3
-11.12
LOC18094936
thaumatin-like protein 1
18094936
POPTR_001G221700v3
-11.01
LOC18094933
thaumatin-like protein 1
18094933
POPTR_001G221400v3
-11.01
LOC18099641
protein DETOXIFICATION 41
18099641
POPTR_005G207600v3
-10.99
LOC7485066
uncharacterized LOC7485066
7485066
POPTR_007G109700v3
-10.97
LOC18099992
L-type lectin-domain containing receptor kinase IV.1
18099992
POPTR_T083600v3
-10.97
LOC18104819
uncharacterized LOC18104819
18104819
POPTR_014G020900v3
-10.94
LOC18102719
dof zinc finger protein DOF3.6
18102719
POPTR_010G205400v3
-10.87
clpP
ATP-dependent Clp protease proteolytic subunit
4929698
Poptr_cp048
-10.77
Poptr_cpR030
4929731
Poptr_cpR030
-10.76
LOC7494570
cytochrome P450 82G1
7494570
POPTR_004G106600v3
-10.74
LOC18103048
squamosa promoter-binding-like protein 3
18103048
POPTR_011G055900v3
-10.72
LOC7496829
UDP-glycosyltransferase 90A1
7496829
POPTR_001G348100v3
-10.72
LOC18108365
protein DETOXIFICATION 29
18108365
POPTR_019G063500v3
-10.71
LOC18098616
dnaJ homolog subfamily B member 3
18098616
POPTR_005G020300v3
-10.69
LOC7492142
STS14 protein
7492142
POPTR_005G130100v3
-10.69
LOC18101383
uncharacterized LOC18101383
18101383
-10.67
LOC7494361
UDP-glycosyltransferase 88A1
7494361
POPTR_004G069600v3
-10.64
LOC7480140
salicylate carboxymethyltransferase
7480140
POPTR_007G021300v3
-10.55
LOC18106527
silicon efflux transporter LSI2
18106527
POPTR_017G141600v3
-10.54
LOC7492088
alkane hydroxylase MAH1
7492088
POPTR_005G094500v3
-10.52