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1 SRP071226 RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391)
loading	run	annotation	attributes
2.4742	SRR3207725		gene perturbation type knockdown of LIM1 \| batch of trees NSF2
2.3499	SRR3207782		gene perturbation type knockdown of LIM1,LIM2 \| batch of trees NSF2
2.3394	SRR3207740		gene perturbation type knockdown of LIM2 \| batch of trees NSF2
-2.4168	SRR3207855		gene perturbation type knockdown of C3H3, C4H1 and C4H2 \| batch of trees NSF3
-2.4218	SRR3207818		gene perturbation type knockdown of C3H3 \| batch of trees NSF3
-2.9639	SRR3207918		gene perturbation type wild type control \| batch of trees NSF4
2 SRP103219 Differential gene expression analysis of drought responsive sense and antisense genes in Populus
loading	run	annotation	attributes
0.8762	SRR5423543		source_name drought treated_long-term_mature leaves \| type drought treated \| drought treatment long-term \| tissue mature leaves \| molecule subtype mRNA
0.7918	SRR5423435		source_name drought treated_short-term_mature leaves \| type drought treated \| drought treatment short-term \| tissue mature leaves \| molecule subtype total RNA
0.7891	SRR5423426		source_name drought treated_short-term_mature leaves \| type drought treated \| drought treatment short-term \| tissue mature leaves \| molecule subtype total RNA
-1.9313	SRR5423555		source_name control_long-term_root \| type control \| drought treatment long-term \| tissue root \| molecule subtype mRNA
-1.9851	SRR5423590		source_name drought treated_long-term_root \| type drought treated \| drought treatment long-term \| tissue root \| molecule subtype mRNA
-2.0447	SRR5423572		source_name control_long-term_root \| type control \| drought treatment long-term \| tissue root \| molecule subtype mRNA
3 SRP201788 A genome assembly and the somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa [RNA-Seq]
loading	run	annotation	attributes
2.3889	SRR9668903
1.8274	SRR9668908
1.4956	SRR9668923
-1.4092	SRR9668925
-1.5202	SRR9668916
-1.6444	SRR9668917
4 SRP035471 Ptr-miR397a is a negative regulator of laccase genes affecting lignin content in Populus trichocarpa
loading	run	annotation	attributes
1.4178	SRR1121298		genotype over expression miR397a
1.0865	SRR1121303		genotype wild type
1.0108	SRR1121301		genotype wild type
-1.2097	SRR1121292		genotype over expression miR397a
-1.2396	SRR1121295		genotype over expression miR397a
-1.5173	SRR1121302		genotype wild type
5 SRP028843 SND1 Transcription Factor-Directed Quantitative Functional Hierarchical Genetic Regulatory Network in Wood Formation in Populus trichocarpa
loading	run	annotation	attributes
1.1944	SRR952902		transfection time 25 hours \| overexpressed gene PtrSND1-B1+sGFP
1.0801	SRR952903		transfection time 25 hours \| overexpressed gene PtrSND1-B1+sGFP
1.0412	SRR952893		transfection time 25 hours \| overexpressed gene sGFP (control)
-0.791	SRR952889		transfection time 12 hours \| overexpressed gene sGFP (control)
-0.8535	SRR952890		transfection time 12 hours \| overexpressed gene sGFP (control)
-1.5157	SRR952892		transfection time 25 hours \| overexpressed gene sGFP (control)
6 SRP074300 RNA-seq of major tissues and xylem cell types of Populus trichocarpa
loading	run	annotation	attributes
0.5593	SRR3473006		source_name Xylem fiber cells \| tissue Xylem \| cell type Fiber cell
0.5405	SRR3473011		source_name Xylem vessel cells \| tissue Xylem \| cell type Vessel cell
0.509	SRR3473008		source_name Xylem fiber cells \| tissue Xylem \| cell type Fiber cell
-0.5018	SRR3473002		source_name Primary root \| tissue Primary root
-0.635	SRR3472991		source_name Shoot tip \| tissue Shoot tip
-0.7927	SRR3473003		source_name Stem differentiating xylem \| tissue Stem differentiating xylem
7 ERP021848 High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
loading	run	annotation	attributes
1.1239	ERR1864426	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102882418 \| INSDC last update 2017-03-01T23:45:20Z \| Submitter Id E-MTAB-5540:Leaf-short-term-cold-replicate-1 \| organism part vascular leaf \| sample name E-MTAB-5540:Leaf-short-term-cold-replicate-1
1.0954	ERR1864427	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102883168 \| INSDC last update 2017-03-01T23:45:20Z \| Submitter Id E-MTAB-5540:Leaf-short-term-cold-replicate-2 \| organism part vascular leaf \| sample name E-MTAB-5540:Leaf-short-term-cold-replicate-2
0.9813	ERR1864428	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102883918 \| INSDC last update 2017-03-01T23:45:20Z \| Submitter Id E-MTAB-5540:Leaf-short-term-cold-replicate-3 \| organism part vascular leaf \| sample name E-MTAB-5540:Leaf-short-term-cold-replicate-3
-0.7337	ERR1864478	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102921418 \| INSDC last update 2017-03-01T23:45:21Z \| Submitter Id E-MTAB-5540:Stem-xylem-prolonged-salt-replicate-2 \| organism part stem xylem \| sample name E-MTAB-5540:Stem-xylem-prolonged-salt-replicate-2
-0.7508	ERR1864450	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102900418 \| INSDC last update 2017-03-01T23:45:21Z \| Submitter Id E-MTAB-5540:Root-prolonged-salt-replicate-1 \| organism part root \| sample name E-MTAB-5540:Root-prolonged-salt-replicate-1
-0.781	ERR1864458	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102906418 \| INSDC last update 2017-03-01T23:45:21Z \| Submitter Id E-MTAB-5540:Root-short-term-drought-replicate-3 \| organism part root \| sample name E-MTAB-5540:Root-short-term-drought-replicate-3
8 SRP072040 RNAseq of drought treated Populus trichocarpa
loading	run	annotation	attributes
0.4776	SRR3241527		days after drought treatment 0 day
0.2912	SRR3241536		days after drought treatment 7 day
0.2214	SRR3241538		days after drought treatment 7 day
-0.1989	SRR3241533		days after drought treatment 5 day
-0.2298	SRR3241537		days after drought treatment 7 day
-0.6562	SRR3241532		days after drought treatment 5 day
9 SRP271234 RNAseq of transfected protoplasts of Populus trichocarpa
loading	run	annotation	attributes
0.4218	SRR12192594		transfected genes PtrMYB092
0.4177	SRR12192595		transfected genes PtrMYB092
0.2444	SRR12192589		transfected genes PtrHSFB3-1
-0.2037	SRR12192593		transfected genes PtrMYB092
-0.6548	SRR12192579		transfected genes GFP
-0.6548	SRR12192578		transfected genes GFP
10 SRP072680 Populus trichocarpa Transcriptome or Gene expression
loading	run	annotation	attributes
0.5439	SRR3317474		isolate tree4 \| tissue xylem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95635
0.2861	SRR3317208		isolate tree3 \| tissue xylem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95633
0.1791	SRR3317482		isolate tree6 \| tissue phloem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95638
-0.2731	SRR3317483		isolate tree6 \| tissue xylem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95639
-0.3107	SRR3317181		isolate tree1 \| tissue phloem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95628
-0.4803	SRR3317201		isolate tree2 \| tissue phloem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95630

PCA Loading

1 ERP021848 High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
loading	run	annotation	attributes
0.7207	ERR1864431	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102886168 \| INSDC last update 2017-03-01T23:45:20Z \| Submitter Id E-MTAB-5540:Leaf-short-term-drought-replicate-3 \| organism part vascular leaf \| sample name E-MTAB-5540:Leaf-short-term-drought-replicate-3
0.7022	ERR1864430	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102885418 \| INSDC last update 2017-03-01T23:45:20Z \| Submitter Id E-MTAB-5540:Leaf-short-term-drought-replicate-2 \| organism part vascular leaf \| sample name E-MTAB-5540:Leaf-short-term-drought-replicate-2
0.6868	ERR1864435	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102889168 \| INSDC last update 2017-03-01T23:45:20Z \| Submitter Id E-MTAB-5540:Leaf-short-term-salt-replicate-1 \| organism part vascular leaf \| sample name E-MTAB-5540:Leaf-short-term-salt-replicate-1
-0.5688	ERR1864481	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102923668 \| INSDC last update 2017-03-01T23:45:22Z \| Submitter Id E-MTAB-5540:Stem-xylem-short-term-cold-replicate-2 \| organism part stem xylem \| sample name E-MTAB-5540:Stem-xylem-short-term-cold-replicate-2
-0.5953	ERR1864482	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102924418 \| INSDC last update 2017-03-01T23:45:22Z \| Submitter Id E-MTAB-5540:Stem-xylem-short-term-cold-replicate-3 \| organism part stem xylem \| sample name E-MTAB-5540:Stem-xylem-short-term-cold-replicate-3
-0.6049	ERR1864480	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102922918 \| INSDC last update 2017-03-01T23:45:22Z \| Submitter Id E-MTAB-5540:Stem-xylem-short-term-cold-replicate-1 \| organism part stem xylem \| sample name E-MTAB-5540:Stem-xylem-short-term-cold-replicate-1
2 SRP074300 RNA-seq of major tissues and xylem cell types of Populus trichocarpa
loading	run	annotation	attributes
0.6016	SRR3472994		source_name Leaf \| tissue Leaf
0.5977	SRR3472995		source_name Leaf \| tissue Leaf
0.5142	SRR3472996		source_name Leaf \| tissue Leaf
-0.4321	SRR3473004		source_name Stem differentiating xylem \| tissue Stem differentiating xylem
-0.4633	SRR3473003		source_name Stem differentiating xylem \| tissue Stem differentiating xylem
-0.6042	SRR3473005		source_name Stem differentiating xylem \| tissue Stem differentiating xylem
3 SRP071226 RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391)
loading	run	annotation	attributes
0.7141	SRR3208011		gene perturbation type knockdown of 4CL5 \| batch of trees NSF6
0.7107	SRR3207879		gene perturbation type knockdown of C4H1 \| batch of trees NSF4
0.6811	SRR3207972		gene perturbation type knockdown of HCT1,HCT6 \| batch of trees NSF5
-0.5886	SRR3207742		gene perturbation type knockdown of LIM2 \| batch of trees NSF2
-0.5911	SRR3207732		gene perturbation type knockdown of LIM1 \| batch of trees NSF2
-0.5953	SRR3207778		gene perturbation type knockdown of LIM1,LIM2 \| batch of trees NSF2
4 SRP103219 Differential gene expression analysis of drought responsive sense and antisense genes in Populus
loading	run	annotation	attributes
0.4718	SRR5423422		source_name drought treated_short-term_mature leaves \| type drought treated \| drought treatment short-term \| tissue mature leaves \| molecule subtype total RNA
0.4681	SRR5423423		source_name drought treated_short-term_mature leaves \| type drought treated \| drought treatment short-term \| tissue mature leaves \| molecule subtype total RNA
0.4669	SRR5423425		source_name drought treated_short-term_mature leaves \| type drought treated \| drought treatment short-term \| tissue mature leaves \| molecule subtype total RNA
-0.5743	SRR5423564		source_name control_long-term_root \| type control \| drought treatment long-term \| tissue root \| molecule subtype mRNA
-0.5747	SRR5423565		source_name control_long-term_root \| type control \| drought treatment long-term \| tissue root \| molecule subtype mRNA
-0.5764	SRR5423567		source_name control_long-term_root \| type control \| drought treatment long-term \| tissue root \| molecule subtype mRNA
5 SRP072040 RNAseq of drought treated Populus trichocarpa
loading	run	annotation	attributes
0.4999	SRR3241537		days after drought treatment 7 day
0.4001	SRR3241535		days after drought treatment 7 day
0.3949	SRR3241538		days after drought treatment 7 day
-0.2872	SRR3241530		days after drought treatment 0 day
-0.4806	SRR3241529		days after drought treatment 0 day
-0.5607	SRR3241528		days after drought treatment 0 day
6 SRP201788 A genome assembly and the somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa [RNA-Seq]
loading	run	annotation	attributes
0.5148	SRR9668929
0.5064	SRR9668920
0.4419	SRR9668930
-0.3203	SRR9321774
-0.3591	SRR9668898
-0.5048	SRR9668903
7 SRP072680 Populus trichocarpa Transcriptome or Gene expression
loading	run	annotation	attributes
0.2458	SRR3317473		isolate tree4 \| tissue phloem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95634
0.2378	SRR3317476		isolate tree5 \| tissue phloem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95636
0.1209	SRR3317207		isolate tree3 \| tissue phloem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95632
-0.1994	SRR3317189		isolate tree1 \| tissue xylem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95629
-0.2722	SRR3317208		isolate tree3 \| tissue xylem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95633
-0.2823	SRR3317480		isolate tree5 \| tissue xylem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95637
8 SRP035471 Ptr-miR397a is a negative regulator of laccase genes affecting lignin content in Populus trichocarpa
loading	run	annotation	attributes
0.1438	SRR1121292		genotype over expression miR397a
0.1139	SRR1121297		genotype over expression miR397a
0.0753	SRR1121295		genotype over expression miR397a
-0.2225	SRR1121303		genotype wild type
-0.2292	SRR1121299		genotype over expression miR397a
-0.2378	SRR1121301		genotype wild type
9 SRP028843 SND1 Transcription Factor-Directed Quantitative Functional Hierarchical Genetic Regulatory Network in Wood Formation in Populus trichocarpa
loading	run	annotation	attributes
0.4592	SRR952892		transfection time 25 hours \| overexpressed gene sGFP (control)
0.1934	SRR952889		transfection time 12 hours \| overexpressed gene sGFP (control)
0.1533	SRR952890		transfection time 12 hours \| overexpressed gene sGFP (control)
-0.1171	SRR952899		transfection time 12 hours \| overexpressed gene PtrSND1-B1+sGFP
-0.166	SRR952886		transfection time 7 hours \| overexpressed gene sGFP (control)
-0.1728	SRR952895		transfection time 7 hours \| overexpressed gene PtrSND1-B1+sGFP
10 SRP271234 RNAseq of transfected protoplasts of Populus trichocarpa
loading	run	annotation	attributes
0.1012	SRR12192586		transfected genes PtrHSFB3-1
0.0976	SRR12192587		transfected genes PtrHSFB3-1
0.0929	SRR12192581		transfected genes GFP
-0.1064	SRR12192590		transfected genes PtrMYB092
-0.1293	SRR12192595		transfected genes PtrMYB092
-0.1308	SRR12192594		transfected genes PtrMYB092

PCA Loading

1 SRP071226 RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391)
loading	run	annotation	attributes
0.5493	SRR3208017		gene perturbation type knockdown of 4CL3,4CL5 \| batch of trees NSF6
0.5416	SRR3207748		gene perturbation type knockdown of MYB167 \| batch of trees NSF2
0.5325	SRR3207695		gene perturbation type knockdown of PAL3 \| batch of trees NSF1
-0.5899	SRR3207795		gene perturbation type knockdown of PAL1,PAL3 \| batch of trees NSF2
-0.6116	SRR3207801		gene perturbation type knockdown of PAL1,PAL3 \| batch of trees NSF2
-0.6401	SRR3207796		gene perturbation type knockdown of PAL1,PAL3 \| batch of trees NSF2
2 SRP074300 RNA-seq of major tissues and xylem cell types of Populus trichocarpa
loading	run	annotation	attributes
0.5198	SRR3473000		source_name Primary root \| tissue Primary root
0.516	SRR3473001		source_name Primary root \| tissue Primary root
0.4744	SRR3473002		source_name Primary root \| tissue Primary root
-0.4619	SRR3472995		source_name Leaf \| tissue Leaf
-0.506	SRR3472991		source_name Shoot tip \| tissue Shoot tip
-0.5135	SRR3472996		source_name Leaf \| tissue Leaf
3 SRP103219 Differential gene expression analysis of drought responsive sense and antisense genes in Populus
loading	run	annotation	attributes
0.8019	SRR5423577		source_name drought treated_long-term_root \| type drought treated \| drought treatment long-term \| tissue root \| molecule subtype mRNA
0.8019	SRR5423580		source_name drought treated_long-term_root \| type drought treated \| drought treatment long-term \| tissue root \| molecule subtype mRNA
0.8019	SRR5423582		source_name drought treated_long-term_root \| type drought treated \| drought treatment long-term \| tissue root \| molecule subtype mRNA
-0.4968	SRR5423321		source_name control_short-term_apex \| type control \| drought treatment short-term \| tissue apex \| molecule subtype total RNA
-0.4976	SRR5423304		source_name control_short-term_apex \| type control \| drought treatment short-term \| tissue apex \| molecule subtype total RNA
-0.4978	SRR5423315		source_name control_short-term_apex \| type control \| drought treatment short-term \| tissue apex \| molecule subtype total RNA
4 SRP201788 A genome assembly and the somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa [RNA-Seq]
loading	run	annotation	attributes
0.5158	SRR9668903
0.4412	SRR9668908
0.3385	SRR9668919
-0.3275	SRR9668925
-0.3988	SRR9668916
-0.486	SRR9668917
5 SRP072040 RNAseq of drought treated Populus trichocarpa
loading	run	annotation	attributes
0.3483	SRR3241538		days after drought treatment 7 day
0.3189	SRR3241535		days after drought treatment 7 day
0.2659	SRR3241531		days after drought treatment 5 day
-0.3008	SRR3241530		days after drought treatment 0 day
-0.3482	SRR3241529		days after drought treatment 0 day
-0.4468	SRR3241528		days after drought treatment 0 day
6 SRP035471 Ptr-miR397a is a negative regulator of laccase genes affecting lignin content in Populus trichocarpa
loading	run	annotation	attributes
0.4405	SRR1121298		genotype over expression miR397a
0.1404	SRR1121303		genotype wild type
0.1286	SRR1121297		genotype over expression miR397a
-0.1888	SRR1121292		genotype over expression miR397a
-0.3527	SRR1121295		genotype over expression miR397a
-0.4289	SRR1121302		genotype wild type
7 ERP021848 High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
loading	run	annotation	attributes
0.537	ERR1864456	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102904918 \| INSDC last update 2017-03-01T23:45:21Z \| Submitter Id E-MTAB-5540:Root-short-term-drought-replicate-1 \| organism part root \| sample name E-MTAB-5540:Root-short-term-drought-replicate-1
0.4825	ERR1864445	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102896668 \| INSDC last update 2017-03-01T23:45:20Z \| Submitter Id E-MTAB-5540:Root-prolonged-drought-replicate-2 \| organism part root \| sample name E-MTAB-5540:Root-prolonged-drought-replicate-2
0.4589	ERR1864446	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102897418 \| INSDC last update 2017-03-01T23:45:20Z \| Submitter Id E-MTAB-5540:Root-prolonged-drought-replicate-3 \| organism part root \| sample name E-MTAB-5540:Root-prolonged-drought-replicate-3
-0.4021	ERR1864411	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102871168 \| INSDC last update 2017-03-01T23:45:19Z \| Submitter Id E-MTAB-5540:Leaf-control-untreated-replicate-1 \| organism part vascular leaf \| sample name E-MTAB-5540:Leaf-control-untreated-replicate-1
-0.4082	ERR1864414	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102873418 \| INSDC last update 2017-03-01T23:45:19Z \| Submitter Id E-MTAB-5540:Leaf-prolonged-cold-replicate-1 \| organism part vascular leaf \| sample name E-MTAB-5540:Leaf-prolonged-cold-replicate-1
-0.4193	ERR1864413	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102872668 \| INSDC last update 2017-03-01T23:45:19Z \| Submitter Id E-MTAB-5540:Leaf-control-untreated-replicate-3 \| organism part vascular leaf \| sample name E-MTAB-5540:Leaf-control-untreated-replicate-3
8 SRP072680 Populus trichocarpa Transcriptome or Gene expression
loading	run	annotation	attributes
0.2594	SRR3317476		isolate tree5 \| tissue phloem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95636
0.2298	SRR3317474		isolate tree4 \| tissue xylem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95635
0.0677	SRR3317473		isolate tree4 \| tissue phloem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95634
-0.085	SRR3317482		isolate tree6 \| tissue phloem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95638
-0.1138	SRR3317181		isolate tree1 \| tissue phloem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95628
-0.2568	SRR3317483		isolate tree6 \| tissue xylem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95639
9 SRP028843 SND1 Transcription Factor-Directed Quantitative Functional Hierarchical Genetic Regulatory Network in Wood Formation in Populus trichocarpa
loading	run	annotation	attributes
0.2303	SRR952902		transfection time 25 hours \| overexpressed gene PtrSND1-B1+sGFP
0.2191	SRR952903		transfection time 25 hours \| overexpressed gene PtrSND1-B1+sGFP
0.2136	SRR952893		transfection time 25 hours \| overexpressed gene sGFP (control)
-0.1492	SRR952888		transfection time 7 hours \| overexpressed gene sGFP (control)
-0.1539	SRR952896		transfection time 7 hours \| overexpressed gene PtrSND1-B1+sGFP
-0.2538	SRR952897		transfection time 7 hours \| overexpressed gene PtrSND1-B1+sGFP
10 SRP271234 RNAseq of transfected protoplasts of Populus trichocarpa
loading	run	annotation	attributes
0.101	SRR12192585		transfected genes PtrHSFB3-1
0.1003	SRR12192584		transfected genes PtrHSFB3-1
0.0909	SRR12192582		transfected genes GFP
-0.0457	SRR12192594		transfected genes PtrMYB092
-0.0657	SRR12192592		transfected genes PtrMYB092
-0.0668	SRR12192593		transfected genes PtrMYB092

PCA Loading

1 SRP071226 RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391)
loading	run	annotation	attributes
0.5132	SRR3207774		gene perturbation type knockdown of PAL2 \| batch of trees NSF2
0.5047	SRR3207815		gene perturbation type knockdown of C3H3 \| batch of trees NSF3
0.4934	SRR3207762		gene perturbation type knockdown of PAL5 \| batch of trees NSF2
-0.4588	SRR3207712		gene perturbation type overexpression of CAD2 \| batch of trees NSF1
-0.4602	SRR3207901		gene perturbation type knockdown of C4H2 \| batch of trees NSF4
-0.4844	SRR3207716		gene perturbation type overexpression of CAD2 \| batch of trees NSF1
2 ERP021848 High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
loading	run	annotation	attributes
0.5053	ERR1864490	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102930418 \| INSDC last update 2017-03-01T23:45:22Z \| Submitter Id E-MTAB-5540:Stem-xylem-short-term-salt-replicate-2 \| organism part stem xylem \| sample name E-MTAB-5540:Stem-xylem-short-term-salt-replicate-2
0.4853	ERR1864491	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102931168 \| INSDC last update 2017-03-01T23:45:22Z \| Submitter Id E-MTAB-5540:Stem-xylem-short-term-salt-replicate-3 \| organism part stem xylem \| sample name E-MTAB-5540:Stem-xylem-short-term-salt-replicate-3
0.4675	ERR1864465	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102911668 \| INSDC last update 2017-03-01T23:45:21Z \| Submitter Id E-MTAB-5540:Stem-xylem-control-untreated-replicate-1 \| organism part stem xylem \| sample name E-MTAB-5540:Stem-xylem-control-untreated-replicate-1
-0.4287	ERR1864452	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102901918 \| INSDC last update 2017-03-01T23:45:21Z \| Submitter Id E-MTAB-5540:Root-prolonged-salt-replicate-3 \| organism part root \| sample name E-MTAB-5540:Root-prolonged-salt-replicate-3
-0.4321	ERR1864450	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102900418 \| INSDC last update 2017-03-01T23:45:21Z \| Submitter Id E-MTAB-5540:Root-prolonged-salt-replicate-1 \| organism part root \| sample name E-MTAB-5540:Root-prolonged-salt-replicate-1
-0.4409	ERR1864451	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102901168 \| INSDC last update 2017-03-01T23:45:21Z \| Submitter Id E-MTAB-5540:Root-prolonged-salt-replicate-2 \| organism part root \| sample name E-MTAB-5540:Root-prolonged-salt-replicate-2
3 SRP074300 RNA-seq of major tissues and xylem cell types of Populus trichocarpa
loading	run	annotation	attributes
0.4839	SRR3473014		source_name Combination of xylem fiber, vessel and ray cells \| tissue Xylem \| cell type Combination of fiber, vessel and ray cells
0.4625	SRR3473012		source_name Combination of xylem fiber, vessel and ray cells \| tissue Xylem \| cell type Combination of fiber, vessel and ray cells
0.4251	SRR3473007		source_name Xylem fiber cells \| tissue Xylem \| cell type Fiber cell
-0.6104	SRR3472991		source_name Shoot tip \| tissue Shoot tip
-0.6238	SRR3472993		source_name Shoot tip \| tissue Shoot tip
-0.6268	SRR3472992		source_name Shoot tip \| tissue Shoot tip
4 SRP072680 Populus trichocarpa Transcriptome or Gene expression
loading	run	annotation	attributes
0.4476	SRR3317206		isolate tree2 \| tissue xylem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95631
0.3353	SRR3317480		isolate tree5 \| tissue xylem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95637
0.2709	SRR3317208		isolate tree3 \| tissue xylem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95633
-0.3301	SRR3317207		isolate tree3 \| tissue phloem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95632
-0.3447	SRR3317473		isolate tree4 \| tissue phloem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95634
-0.4046	SRR3317476		isolate tree5 \| tissue phloem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95636
5 SRP103219 Differential gene expression analysis of drought responsive sense and antisense genes in Populus
loading	run	annotation	attributes
0.3821	SRR5423438		source_name drought treated_short-term_mature leaves \| type drought treated \| drought treatment short-term \| tissue mature leaves \| molecule subtype total RNA
0.3789	SRR5423440		source_name drought treated_short-term_mature leaves \| type drought treated \| drought treatment short-term \| tissue mature leaves \| molecule subtype total RNA
0.377	SRR5423437		source_name drought treated_short-term_mature leaves \| type drought treated \| drought treatment short-term \| tissue mature leaves \| molecule subtype total RNA
-0.5754	SRR5423456		source_name control_long-term_apex \| type control \| drought treatment long-term \| tissue apex \| molecule subtype mRNA
-0.5758	SRR5423457		source_name control_long-term_apex \| type control \| drought treatment long-term \| tissue apex \| molecule subtype mRNA
-0.5929	SRR5423461		source_name control_long-term_apex \| type control \| drought treatment long-term \| tissue apex \| molecule subtype mRNA
6 SRP201788 A genome assembly and the somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa [RNA-Seq]
loading	run	annotation	attributes
0.3237	SRR9668930
0.2863	SRR9668929
0.2571	SRR9668928
-0.2636	SRR9321774
-0.2699	SRR9321772
-0.3352	SRR9321773
7 SRP035471 Ptr-miR397a is a negative regulator of laccase genes affecting lignin content in Populus trichocarpa
loading	run	annotation	attributes
0.3197	SRR1121302		genotype wild type
0.1773	SRR1121294		genotype over expression miR397a
0.1331	SRR1121299		genotype over expression miR397a
-0.1204	SRR1121303		genotype wild type
-0.1423	SRR1121300		genotype over expression miR397a
-0.2745	SRR1121298		genotype over expression miR397a
8 SRP072040 RNAseq of drought treated Populus trichocarpa
loading	run	annotation	attributes
0.3081	SRR3241528		days after drought treatment 0 day
0.2968	SRR3241529		days after drought treatment 0 day
0.2642	SRR3241530		days after drought treatment 0 day
-0.2083	SRR3241535		days after drought treatment 7 day
-0.232	SRR3241538		days after drought treatment 7 day
-0.268	SRR3241534		days after drought treatment 5 day
9 SRP028843 SND1 Transcription Factor-Directed Quantitative Functional Hierarchical Genetic Regulatory Network in Wood Formation in Populus trichocarpa
loading	run	annotation	attributes
0.1807	SRR952897		transfection time 7 hours \| overexpressed gene PtrSND1-B1+sGFP
0.1456	SRR952888		transfection time 7 hours \| overexpressed gene sGFP (control)
0.107	SRR952892		transfection time 25 hours \| overexpressed gene sGFP (control)
-0.1108	SRR952899		transfection time 12 hours \| overexpressed gene PtrSND1-B1+sGFP
-0.12	SRR952902		transfection time 25 hours \| overexpressed gene PtrSND1-B1+sGFP
-0.1748	SRR952903		transfection time 25 hours \| overexpressed gene PtrSND1-B1+sGFP
10 SRP271234 RNAseq of transfected protoplasts of Populus trichocarpa
loading	run	annotation	attributes
0.1496	SRR12192592		transfected genes PtrMYB092
0.1483	SRR12192593		transfected genes PtrMYB092
0.0995	SRR12192580		transfected genes GFP
-0.0987	SRR12192583		transfected genes GFP
-0.1322	SRR12192584		transfected genes PtrHSFB3-1
-0.1349	SRR12192585		transfected genes PtrHSFB3-1

PCA Loading

1 SRP103219 Differential gene expression analysis of drought responsive sense and antisense genes in Populus
loading	run	annotation	attributes
0.7713	SRR5423376		source_name drought treated_short-term_apex \| drought treatment short-term \| tissue apex \| molecule subtype total RNA
0.7699	SRR5423378		source_name drought treated_short-term_apex \| drought treatment short-term \| tissue apex \| molecule subtype total RNA
0.769	SRR5423370		source_name drought treated_short-term_apex \| drought treatment short-term \| tissue apex \| molecule subtype total RNA
-0.6039	SRR5423512		source_name drought treated_long-term_young leaves \| drought treatment long-term \| tissue young leaves \| molecule subtype mRNA
-0.606	SRR5423517		source_name drought treated_long-term_young leaves \| drought treatment long-term \| tissue young leaves \| molecule subtype mRNA
-0.6089	SRR5423511		source_name drought treated_long-term_young leaves \| drought treatment long-term \| tissue young leaves \| molecule subtype mRNA
2 ERP021848 High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
loading	run	annotation	attributes
0.3667	ERR1864476	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102919918 \| INSDC last update 2017-03-01T23:45:21Z \| Submitter Id E-MTAB-5540:Stem-xylem-prolonged-heat-replicate-3 \| organism part stem xylem \| sample name E-MTAB-5540:Stem-xylem-prolonged-heat-replicate-3
0.3435	ERR1864475	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102919168 \| INSDC last update 2017-03-01T23:45:21Z \| Submitter Id E-MTAB-5540:Stem-xylem-prolonged-heat-replicate-2 \| organism part stem xylem \| sample name E-MTAB-5540:Stem-xylem-prolonged-heat-replicate-2
0.2963	ERR1864474	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102918418 \| INSDC last update 2017-03-01T23:45:21Z \| Submitter Id E-MTAB-5540:Stem-xylem-prolonged-heat-replicate-1 \| organism part stem xylem \| sample name E-MTAB-5540:Stem-xylem-prolonged-heat-replicate-1
-0.2394	ERR1864426	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102882418 \| INSDC last update 2017-03-01T23:45:20Z \| Submitter Id E-MTAB-5540:Leaf-short-term-cold-replicate-1 \| organism part vascular leaf \| sample name E-MTAB-5540:Leaf-short-term-cold-replicate-1
-0.247	ERR1864428	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102883918 \| INSDC last update 2017-03-01T23:45:20Z \| Submitter Id E-MTAB-5540:Leaf-short-term-cold-replicate-3 \| organism part vascular leaf \| sample name E-MTAB-5540:Leaf-short-term-cold-replicate-3
-0.2487	ERR1864414	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102873418 \| INSDC last update 2017-03-01T23:45:19Z \| Submitter Id E-MTAB-5540:Leaf-prolonged-cold-replicate-1 \| organism part vascular leaf \| sample name E-MTAB-5540:Leaf-prolonged-cold-replicate-1
3 SRP201788 A genome assembly and the somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa [RNA-Seq]
loading	run	annotation	attributes
0.2533	SRR9668903
0.1903	SRR9321772
0.1663	SRR9321779
-0.2126	SRR9668897
-0.2233	SRR9668924
-0.225	SRR9321778
4 SRP072040 RNAseq of drought treated Populus trichocarpa
loading	run	annotation	attributes
0.1911	SRR3241537		days after drought treatment 7 day
0.1468	SRR3241536		days after drought treatment 7 day
0.0857	SRR3241535		days after drought treatment 7 day
-0.0591	SRR3241527		days after drought treatment 0 day
-0.11	SRR3241528		days after drought treatment 0 day
-0.1259	SRR3241529		days after drought treatment 0 day
5 SRP071226 RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391)
loading	run	annotation	attributes
0.1879	SRR3208020		gene perturbation type knockdown of 4CL3,4CL5 \| batch of trees NSF6
0.1709	SRR3207749		gene perturbation type knockdown of MYB167 \| batch of trees NSF2
0.1477	SRR3208011		gene perturbation type knockdown of 4CL5 \| batch of trees NSF6
-0.1678	SRR3207919		gene perturbation type wild type control \| batch of trees NSF4
-0.177	SRR3207905		gene perturbation type knockdown of C4H2 \| batch of trees NSF4
-0.1963	SRR3207903		gene perturbation type knockdown of C4H2 \| batch of trees NSF4
6 SRP028843 SND1 Transcription Factor-Directed Quantitative Functional Hierarchical Genetic Regulatory Network in Wood Formation in Populus trichocarpa
loading	run	annotation	attributes
0.1567	SRR952892		transfection time 25 hours \| overexpressed gene sGFP (control)
0.0997	SRR952890		transfection time 12 hours \| overexpressed gene sGFP (control)
0.0534	SRR952893		transfection time 25 hours \| overexpressed gene sGFP (control)
-0.0542	SRR952886		transfection time 7 hours \| overexpressed gene sGFP (control)
-0.0792	SRR952895		transfection time 7 hours \| overexpressed gene PtrSND1-B1+sGFP
-0.088	SRR952903		transfection time 25 hours \| overexpressed gene PtrSND1-B1+sGFP
7 SRP072680 Populus trichocarpa Transcriptome or Gene expression
loading	run	annotation	attributes
0.1376	SRR3317483		isolate tree6 \| tissue xylem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95639
0.1074	SRR3317482		isolate tree6 \| tissue phloem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95638
0.0526	SRR3317189		isolate tree1 \| tissue xylem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95629
-0.035	SRR3317201		isolate tree2 \| tissue phloem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95630
-0.0869	SRR3317476		isolate tree5 \| tissue phloem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95636
-0.1055	SRR3317181		isolate tree1 \| tissue phloem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95628
8 SRP074300 RNA-seq of major tissues and xylem cell types of Populus trichocarpa
loading	run	annotation	attributes
0.1353	SRR3473014		source_name Combination of xylem fiber, vessel and ray cells \| tissue Xylem \| cell type Combination of fiber, vessel and ray cells
0.1334	SRR3473012		source_name Combination of xylem fiber, vessel and ray cells \| tissue Xylem \| cell type Combination of fiber, vessel and ray cells
0.1117	SRR3473013		source_name Combination of xylem fiber, vessel and ray cells \| tissue Xylem \| cell type Combination of fiber, vessel and ray cells
-0.148	SRR3472995		source_name Leaf \| tissue Leaf
-0.169	SRR3472996		source_name Leaf \| tissue Leaf
-0.2215	SRR3472994		source_name Leaf \| tissue Leaf
9 SRP035471 Ptr-miR397a is a negative regulator of laccase genes affecting lignin content in Populus trichocarpa
loading	run	annotation	attributes
0.1223	SRR1121301		genotype wild type
0.0948	SRR1121302		genotype wild type
0.0647	SRR1121294		genotype over expression miR397a
-0.0563	SRR1121298		genotype over expression miR397a
-0.0657	SRR1121295		genotype over expression miR397a
-0.0963	SRR1121292		genotype over expression miR397a
10 SRP271234 RNAseq of transfected protoplasts of Populus trichocarpa
loading	run	annotation	attributes
0.1101	SRR12192580		transfected genes GFP
0.1027	SRR12192581		transfected genes GFP
0.0747	SRR12192579		transfected genes GFP
-0.0748	SRR12192584		transfected genes PtrHSFB3-1
-0.0812	SRR12192594		transfected genes PtrMYB092
-0.0869	SRR12192595		transfected genes PtrMYB092

PCA Loading

1 SRP071226 RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391)
loading	run	annotation	attributes
0.4197	SRR3207696		gene perturbation type knockdown of PAL3 \| batch of trees NSF1
0.4191	SRR3207900		gene perturbation type knockdown of C4H2 \| batch of trees NSF4
0.4182	SRR3207874		gene perturbation type knockdown of C4H1 \| batch of trees NSF4
-0.3349	SRR3208037		gene perturbation type knockdown of CCoAOMT1,CCoAOMT2 \| batch of trees NSF6
-0.3627	SRR3208015		gene perturbation type knockdown of 4CL5 \| batch of trees NSF6
-0.3924	SRR3208044		gene perturbation type knockdown of AldOMT2 \| batch of trees NSF6
2 SRP103219 Differential gene expression analysis of drought responsive sense and antisense genes in Populus
loading	run	annotation	attributes
0.4599	SRR5423409		source_name control_short-term_mature leaves \| type control \| drought treatment short-term \| tissue mature leaves \| molecule subtype total RNA
0.4599	SRR5423414		source_name control_short-term_mature leaves \| type control \| drought treatment short-term \| tissue mature leaves \| molecule subtype total RNA
0.4596	SRR5423402		source_name control_short-term_mature leaves \| type control \| drought treatment short-term \| tissue mature leaves \| molecule subtype total RNA
-0.3261	SRR5423484		source_name drought treated_long-term_apex \| type drought treated \| drought treatment long-term \| tissue apex \| molecule subtype mRNA
-0.3276	SRR5423480		source_name drought treated_long-term_apex \| type drought treated \| drought treatment long-term \| tissue apex \| molecule subtype mRNA
-0.3282	SRR5423483		source_name drought treated_long-term_apex \| type drought treated \| drought treatment long-term \| tissue apex \| molecule subtype mRNA
3 SRP072040 RNAseq of drought treated Populus trichocarpa
loading	run	annotation	attributes
0.2211	SRR3241527		days after drought treatment 0 day
0.1319	SRR3241528		days after drought treatment 0 day
0.1173	SRR3241533		days after drought treatment 5 day
-0.1945	SRR3241537		days after drought treatment 7 day
-0.236	SRR3241535		days after drought treatment 7 day
-0.3011	SRR3241536		days after drought treatment 7 day
4 SRP072680 Populus trichocarpa Transcriptome or Gene expression
loading	run	annotation	attributes
0.2546	SRR3317474		isolate tree4 \| tissue xylem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95635
0.1012	SRR3317473		isolate tree4 \| tissue phloem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95634
0.1001	SRR3317476		isolate tree5 \| tissue phloem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95636
-0.057	SRR3317189		isolate tree1 \| tissue xylem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95629
-0.1795	SRR3317480		isolate tree5 \| tissue xylem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95637
-0.2963	SRR3317483		isolate tree6 \| tissue xylem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95639
5 SRP028843 SND1 Transcription Factor-Directed Quantitative Functional Hierarchical Genetic Regulatory Network in Wood Formation in Populus trichocarpa
loading	run	annotation	attributes
0.1562	SRR952888		transfection time 7 hours \| overexpressed gene sGFP (control)
0.1178	SRR952897		transfection time 7 hours \| overexpressed gene PtrSND1-B1+sGFP
0.1153	SRR952886		transfection time 7 hours \| overexpressed gene sGFP (control)
-0.1298	SRR952901		transfection time 25 hours \| overexpressed gene PtrSND1-B1+sGFP
-0.167	SRR952893		transfection time 25 hours \| overexpressed gene sGFP (control)
-0.2846	SRR952892		transfection time 25 hours \| overexpressed gene sGFP (control)
6 SRP201788 A genome assembly and the somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa [RNA-Seq]
loading	run	annotation	attributes
0.254	SRR9668919
0.2475	SRR9668908
0.221	SRR9668928
-0.1908	SRR9668902
-0.2101	SRR9668927
-0.2151	SRR9321778
7 ERP021848 High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
loading	run	annotation	attributes
0.2757	ERR1864463	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102910168 \| INSDC last update 2017-03-01T23:45:21Z \| Submitter Id E-MTAB-5540:Root-short-term-salt-replicate-2 \| organism part root \| sample name E-MTAB-5540:Root-short-term-salt-replicate-2
0.2719	ERR1864464	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102910918 \| INSDC last update 2017-03-01T23:45:21Z \| Submitter Id E-MTAB-5540:Root-short-term-salt-replicate-3 \| organism part root \| sample name E-MTAB-5540:Root-short-term-salt-replicate-3
0.2555	ERR1864462	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102909418 \| INSDC last update 2017-03-01T23:45:21Z \| Submitter Id E-MTAB-5540:Root-short-term-salt-replicate-1 \| organism part root \| sample name E-MTAB-5540:Root-short-term-salt-replicate-1
-0.1758	ERR1864486	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102927418 \| INSDC last update 2017-03-01T23:45:22Z \| Submitter Id E-MTAB-5540:Stem-xylem-short-term-heat-replicate-1 \| organism part stem xylem \| sample name E-MTAB-5540:Stem-xylem-short-term-heat-replicate-1
-0.1761	ERR1864419	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102877168 \| INSDC last update 2017-03-01T23:45:19Z \| Submitter Id E-MTAB-5540:Leaf-prolonged-drought-replicate-3 \| organism part vascular leaf \| sample name E-MTAB-5540:Leaf-prolonged-drought-replicate-3
-0.2039	ERR1864471	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102916168 \| INSDC last update 2017-03-01T23:45:21Z \| Submitter Id E-MTAB-5540:Stem-xylem-prolonged-drought-replicate-1 \| organism part stem xylem \| sample name E-MTAB-5540:Stem-xylem-prolonged-drought-replicate-1
8 SRP035471 Ptr-miR397a is a negative regulator of laccase genes affecting lignin content in Populus trichocarpa
loading	run	annotation	attributes
0.192	SRR1121292		genotype over expression miR397a
0.1312	SRR1121295		genotype over expression miR397a
0.0472	SRR1121303		genotype wild type
-0.096	SRR1121294		genotype over expression miR397a
-0.0998	SRR1121293		genotype over expression miR397a
-0.1583	SRR1121302		genotype wild type
9 SRP074300 RNA-seq of major tissues and xylem cell types of Populus trichocarpa
loading	run	annotation	attributes
0.2449	SRR3472999		source_name Phloem \| tissue Phloem
0.2144	SRR3473000		source_name Primary root \| tissue Primary root
0.2064	SRR3473002		source_name Primary root \| tissue Primary root
-0.1406	SRR3473007		source_name Xylem fiber cells \| tissue Xylem \| cell type Fiber cell
-0.1509	SRR3473014		source_name Combination of xylem fiber, vessel and ray cells \| tissue Xylem \| cell type Combination of fiber, vessel and ray cells
-0.1563	SRR3473012		source_name Combination of xylem fiber, vessel and ray cells \| tissue Xylem \| cell type Combination of fiber, vessel and ray cells
10 SRP271234 RNAseq of transfected protoplasts of Populus trichocarpa
loading	run	annotation	attributes
0.1528	SRR12192585		transfected genes PtrHSFB3-1
0.1523	SRR12192584		transfected genes PtrHSFB3-1
0.1036	SRR12192589		transfected genes PtrHSFB3-1
-0.0914	SRR12192592		transfected genes PtrMYB092
-0.1358	SRR12192581		transfected genes GFP
-0.1498	SRR12192580		transfected genes GFP

PCA Loading

1 SRP071226 RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391)
loading	run	annotation	attributes
0.353	SRR3207743		gene perturbation type knockdown of PAL5 \| batch of trees NSF2
0.3315	SRR3208038		gene perturbation type knockdown of CCoAOMT1,CCoAOMT2 \| batch of trees NSF6
0.3233	SRR3208036		gene perturbation type knockdown of CCoAOMT1,CCoAOMT2 \| batch of trees NSF6
-0.4359	SRR3207720		gene perturbation type wild type control \| batch of trees NSF1
-0.4651	SRR3207713		gene perturbation type overexpression of CAD2 \| batch of trees NSF1
-0.4684	SRR3207898		gene perturbation type knockdown of MYB156 \| batch of trees NSF4
2 ERP021848 High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
loading	run	annotation	attributes
0.3262	ERR1864443	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102895168 \| INSDC last update 2017-03-01T23:45:20Z \| Submitter Id E-MTAB-5540:Root-prolonged-cold-replicate-3 \| organism part root \| sample name E-MTAB-5540:Root-prolonged-cold-replicate-3
0.3125	ERR1864442	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102894418 \| INSDC last update 2017-03-01T23:45:20Z \| Submitter Id E-MTAB-5540:Root-prolonged-cold-replicate-2 \| organism part root \| sample name E-MTAB-5540:Root-prolonged-cold-replicate-2
0.304	ERR1864441	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102893668 \| INSDC last update 2017-03-01T23:45:20Z \| Submitter Id E-MTAB-5540:Root-prolonged-cold-replicate-1 \| organism part root \| sample name E-MTAB-5540:Root-prolonged-cold-replicate-1
-0.4205	ERR1864474	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102918418 \| INSDC last update 2017-03-01T23:45:21Z \| Submitter Id E-MTAB-5540:Stem-xylem-prolonged-heat-replicate-1 \| organism part stem xylem \| sample name E-MTAB-5540:Stem-xylem-prolonged-heat-replicate-1
-0.4225	ERR1864476	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102919918 \| INSDC last update 2017-03-01T23:45:21Z \| Submitter Id E-MTAB-5540:Stem-xylem-prolonged-heat-replicate-3 \| organism part stem xylem \| sample name E-MTAB-5540:Stem-xylem-prolonged-heat-replicate-3
-0.4498	ERR1864475	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102919168 \| INSDC last update 2017-03-01T23:45:21Z \| Submitter Id E-MTAB-5540:Stem-xylem-prolonged-heat-replicate-2 \| organism part stem xylem \| sample name E-MTAB-5540:Stem-xylem-prolonged-heat-replicate-2
3 SRP074300 RNA-seq of major tissues and xylem cell types of Populus trichocarpa
loading	run	annotation	attributes
0.3247	SRR3473002		source_name Primary root \| tissue Primary root
0.2978	SRR3473000		source_name Primary root \| tissue Primary root
0.2875	SRR3473001		source_name Primary root \| tissue Primary root
-0.3155	SRR3473013		source_name Combination of xylem fiber, vessel and ray cells \| tissue Xylem \| cell type Combination of fiber, vessel and ray cells
-0.3338	SRR3473014		source_name Combination of xylem fiber, vessel and ray cells \| tissue Xylem \| cell type Combination of fiber, vessel and ray cells
-0.3577	SRR3473012		source_name Combination of xylem fiber, vessel and ray cells \| tissue Xylem \| cell type Combination of fiber, vessel and ray cells
4 SRP072040 RNAseq of drought treated Populus trichocarpa
loading	run	annotation	attributes
0.2174	SRR3241533		days after drought treatment 5 day
0.0984	SRR3241535		days after drought treatment 7 day
0.0853	SRR3241531		days after drought treatment 5 day
-0.127	SRR3241530		days after drought treatment 0 day
-0.2025	SRR3241529		days after drought treatment 0 day
-0.2173	SRR3241527		days after drought treatment 0 day
5 SRP103219 Differential gene expression analysis of drought responsive sense and antisense genes in Populus
loading	run	annotation	attributes
0.2093	SRR5423596		source_name drought treated_long-term_root \| type drought treated \| tissue root \| molecule subtype total RNA
0.2089	SRR5423595		source_name drought treated_long-term_root \| type drought treated \| tissue root \| molecule subtype total RNA
0.1849	SRR5423594		source_name control_long-term_root \| type control \| tissue root \| molecule subtype total RNA
-0.1444	SRR5423460		source_name control_long-term_apex \| type control \| tissue apex \| molecule subtype mRNA
-0.1487	SRR5423470		source_name control_long-term_apex \| type control \| tissue apex \| molecule subtype mRNA
-0.1801	SRR5423461		source_name control_long-term_apex \| type control \| tissue apex \| molecule subtype mRNA
6 SRP028843 SND1 Transcription Factor-Directed Quantitative Functional Hierarchical Genetic Regulatory Network in Wood Formation in Populus trichocarpa
loading	run	annotation	attributes
0.2061	SRR952892		transfection time 25 hours \| overexpressed gene sGFP (control)
0.1829	SRR952894		transfection time 25 hours \| overexpressed gene sGFP (control)
0.1385	SRR952889		transfection time 12 hours \| overexpressed gene sGFP (control)
-0.1027	SRR952896		transfection time 7 hours \| overexpressed gene PtrSND1-B1+sGFP
-0.1138	SRR952886		transfection time 7 hours \| overexpressed gene sGFP (control)
-0.1278	SRR952887		transfection time 7 hours \| overexpressed gene sGFP (control)
7 SRP072680 Populus trichocarpa Transcriptome or Gene expression
loading	run	annotation	attributes
0.1923	SRR3317483		isolate tree6 \| tissue xylem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95639
0.1372	SRR3317482		isolate tree6 \| tissue phloem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95638
0.0989	SRR3317181		isolate tree1 \| tissue phloem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95628
-0.0827	SRR3317473		isolate tree4 \| tissue phloem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95634
-0.1148	SRR3317208		isolate tree3 \| tissue xylem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95633
-0.1573	SRR3317474		isolate tree4 \| tissue xylem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95635
8 SRP271234 RNAseq of transfected protoplasts of Populus trichocarpa
loading	run	annotation	attributes
0.1818	SRR12192578		transfected genes GFP
0.1767	SRR12192579		transfected genes GFP
0.1168	SRR12192591		transfected genes PtrMYB092
-0.0712	SRR12192582		transfected genes GFP
-0.1369	SRR12192594		transfected genes PtrMYB092
-0.1482	SRR12192595		transfected genes PtrMYB092
9 SRP201788 A genome assembly and the somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa [RNA-Seq]
loading	run	annotation	attributes
0.1602	SRR9668917
0.1241	SRR9668920
0.1237	SRR9668927
-0.1231	SRR9668903
-0.1313	SRR9668895
-0.1783	SRR9668900
10 SRP035471 Ptr-miR397a is a negative regulator of laccase genes affecting lignin content in Populus trichocarpa
loading	run	annotation	attributes
0.1153	SRR1121296		genotype over expression miR397a
0.0968	SRR1121293		genotype over expression miR397a
0.0844	SRR1121300		genotype over expression miR397a
-0.0606	SRR1121294		genotype over expression miR397a
-0.0738	SRR1121301		genotype wild type
-0.1603	SRR1121297		genotype over expression miR397a

PCA Loading

1 SRP072040 RNAseq of drought treated Populus trichocarpa
loading	run	annotation	attributes
0.4612	SRR3241533		days after drought treatment 5 day
0.4383	SRR3241534		days after drought treatment 5 day
0.341	SRR3241531		days after drought treatment 5 day
-0.2443	SRR3241536		days after drought treatment 7 day
-0.3335	SRR3241530		days after drought treatment 0 day
-0.459	SRR3241527		days after drought treatment 0 day
2 SRP071226 RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391)
loading	run	annotation	attributes
0.4116	SRR3207716		gene perturbation type overexpression of CAD2 \| batch of trees NSF1
0.3511	SRR3207830		gene perturbation type knockdown of CAD1 \| batch of trees NSF3
0.3485	SRR3207714		gene perturbation type overexpression of CAD2 \| batch of trees NSF1
-0.3713	SRR3207983		gene perturbation type knockdown of KNOX1 \| batch of trees NSF5
-0.3865	SRR3207991		gene perturbation type knockdown of MYB003,MYB020 \| batch of trees NSF5
-0.3954	SRR3207993		gene perturbation type knockdown of MYB003,MYB020 \| batch of trees NSF5
3 SRP072680 Populus trichocarpa Transcriptome or Gene expression
loading	run	annotation	attributes
0.3145	SRR3317189		isolate tree1 \| tissue xylem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95629
0.1887	SRR3317208		isolate tree3 \| tissue xylem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95633
0.1518	SRR3317480		isolate tree5 \| tissue xylem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95637
-0.1632	SRR3317207		isolate tree3 \| tissue phloem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95632
-0.1992	SRR3317474		isolate tree4 \| tissue xylem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95635
-0.1997	SRR3317201		isolate tree2 \| tissue phloem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95630
4 ERP021848 High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
loading	run	annotation	attributes
0.2963	ERR1864472	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102916918 \| INSDC last update 2017-03-01T23:45:21Z \| Submitter Id E-MTAB-5540:Stem-xylem-prolonged-drought-replicate-2 \| organism part stem xylem \| sample name E-MTAB-5540:Stem-xylem-prolonged-drought-replicate-2
0.2957	ERR1864424	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102880918 \| INSDC last update 2017-03-01T23:45:20Z \| Submitter Id E-MTAB-5540:Leaf-prolonged-salt-replicate-2 \| organism part vascular leaf \| sample name E-MTAB-5540:Leaf-prolonged-salt-replicate-2
0.2807	ERR1864425	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102881668 \| INSDC last update 2017-03-01T23:45:20Z \| Submitter Id E-MTAB-5540:Leaf-prolonged-salt-replicate-3 \| organism part vascular leaf \| sample name E-MTAB-5540:Leaf-prolonged-salt-replicate-3
-0.3111	ERR1864480	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102922918 \| INSDC last update 2017-03-01T23:45:22Z \| Submitter Id E-MTAB-5540:Stem-xylem-short-term-cold-replicate-1 \| organism part stem xylem \| sample name E-MTAB-5540:Stem-xylem-short-term-cold-replicate-1
-0.3449	ERR1864479	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102922168 \| INSDC last update 2017-03-01T23:45:21Z \| Submitter Id E-MTAB-5540:Stem-xylem-prolonged-salt-replicate-3 \| organism part stem xylem \| sample name E-MTAB-5540:Stem-xylem-prolonged-salt-replicate-3
-0.3869	ERR1864481	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102923668 \| INSDC last update 2017-03-01T23:45:22Z \| Submitter Id E-MTAB-5540:Stem-xylem-short-term-cold-replicate-2 \| organism part stem xylem \| sample name E-MTAB-5540:Stem-xylem-short-term-cold-replicate-2
5 SRP271234 RNAseq of transfected protoplasts of Populus trichocarpa
loading	run	annotation	attributes
0.2945	SRR12192579		transfected genes GFP
0.2928	SRR12192578		transfected genes GFP
0.117	SRR12192582		transfected genes GFP
-0.1652	SRR12192595		transfected genes PtrMYB092
-0.167	SRR12192588		transfected genes PtrHSFB3-1
-0.1697	SRR12192594		transfected genes PtrMYB092
6 SRP074300 RNA-seq of major tissues and xylem cell types of Populus trichocarpa
loading	run	annotation	attributes
0.2867	SRR3473013		source_name Combination of xylem fiber, vessel and ray cells \| tissue Xylem \| cell type Combination of fiber, vessel and ray cells
0.2033	SRR3473010		source_name Xylem vessel cells \| tissue Xylem \| cell type Vessel cell
0.1314	SRR3473011		source_name Xylem vessel cells \| tissue Xylem \| cell type Vessel cell
-0.1587	SRR3472997		source_name Phloem \| tissue Phloem
-0.1988	SRR3472999		source_name Phloem \| tissue Phloem
-0.2582	SRR3472998		source_name Phloem \| tissue Phloem
7 SRP201788 A genome assembly and the somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa [RNA-Seq]
loading	run	annotation	attributes
0.2546	SRR9321773
0.2166	SRR9321772
0.2027	SRR9668902
-0.2515	SRR9668930
-0.2605	SRR9668928
-0.2664	SRR9668922
8 SRP028843 SND1 Transcription Factor-Directed Quantitative Functional Hierarchical Genetic Regulatory Network in Wood Formation in Populus trichocarpa
loading	run	annotation	attributes
0.2278	SRR952889		transfection time 12 hours \| overexpressed gene sGFP (control)
0.2186	SRR952894		transfection time 25 hours \| overexpressed gene sGFP (control)
0.1398	SRR952898		transfection time 12 hours \| overexpressed gene PtrSND1-B1+sGFP
-0.08	SRR952886		transfection time 7 hours \| overexpressed gene sGFP (control)
-0.1423	SRR952902		transfection time 25 hours \| overexpressed gene PtrSND1-B1+sGFP
-0.1696	SRR952893		transfection time 25 hours \| overexpressed gene sGFP (control)
9 SRP035471 Ptr-miR397a is a negative regulator of laccase genes affecting lignin content in Populus trichocarpa
loading	run	annotation	attributes
0.193	SRR1121296		genotype over expression miR397a
0.1686	SRR1121302		genotype wild type
0.1477	SRR1121301		genotype wild type
-0.1251	SRR1121298		genotype over expression miR397a
-0.2799	SRR1121294		genotype over expression miR397a
-0.3229	SRR1121297		genotype over expression miR397a
10 SRP103219 Differential gene expression analysis of drought responsive sense and antisense genes in Populus
loading	run	annotation	attributes
0.169	SRR5423446		source_name drought treated_short-term_mature leaves \| type drought treated \| drought treatment short-term \| tissue mature leaves \| molecule subtype total RNA
0.1649	SRR5423447		source_name drought treated_short-term_mature leaves \| type drought treated \| drought treatment short-term \| tissue mature leaves \| molecule subtype total RNA
0.1643	SRR5423439		source_name drought treated_short-term_mature leaves \| type drought treated \| drought treatment short-term \| tissue mature leaves \| molecule subtype total RNA
-0.1671	SRR5423500		source_name control_long-term_young leaves \| type control \| drought treatment long-term \| tissue young leaves \| molecule subtype mRNA
-0.1672	SRR5423501		source_name control_long-term_young leaves \| type control \| drought treatment long-term \| tissue young leaves \| molecule subtype mRNA
-0.1681	SRR5423503		source_name control_long-term_young leaves \| type control \| drought treatment long-term \| tissue young leaves \| molecule subtype mRNA

PCA Loading

1 SRP074300 RNA-seq of major tissues and xylem cell types of Populus trichocarpa
loading	run	annotation	attributes
0.2147	SRR3473003		source_name Stem differentiating xylem \| tissue Stem differentiating xylem
0.1395	SRR3472994		source_name Leaf \| tissue Leaf
0.1237	SRR3473002		source_name Primary root \| tissue Primary root
-0.3573	SRR3472997		source_name Phloem \| tissue Phloem
-0.3683	SRR3472999		source_name Phloem \| tissue Phloem
-0.4097	SRR3472998		source_name Phloem \| tissue Phloem
2 ERP021848 High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
loading	run	annotation	attributes
0.3969	ERR1864472	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102916918 \| INSDC last update 2017-03-01T23:45:21Z \| Submitter Id E-MTAB-5540:Stem-xylem-prolonged-drought-replicate-2 \| organism part stem xylem \| sample name E-MTAB-5540:Stem-xylem-prolonged-drought-replicate-2
0.3614	ERR1864473	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102917668 \| INSDC last update 2017-03-01T23:45:21Z \| Submitter Id E-MTAB-5540:Stem-xylem-prolonged-drought-replicate-3 \| organism part stem xylem \| sample name E-MTAB-5540:Stem-xylem-prolonged-drought-replicate-3
0.3286	ERR1864471	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102916168 \| INSDC last update 2017-03-01T23:45:21Z \| Submitter Id E-MTAB-5540:Stem-xylem-prolonged-drought-replicate-1 \| organism part stem xylem \| sample name E-MTAB-5540:Stem-xylem-prolonged-drought-replicate-1
-0.3431	ERR1864475	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102919168 \| INSDC last update 2017-03-01T23:45:21Z \| Submitter Id E-MTAB-5540:Stem-xylem-prolonged-heat-replicate-2 \| organism part stem xylem \| sample name E-MTAB-5540:Stem-xylem-prolonged-heat-replicate-2
-0.3513	ERR1864420	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102877918 \| INSDC last update 2017-03-01T23:45:20Z \| Submitter Id E-MTAB-5540:Leaf-prolonged-heat-replicate-1 \| organism part vascular leaf \| sample name E-MTAB-5540:Leaf-prolonged-heat-replicate-1
-0.3992	ERR1864422	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102879418 \| INSDC last update 2017-03-01T23:45:20Z \| Submitter Id E-MTAB-5540:Leaf-prolonged-heat-replicate-3 \| organism part vascular leaf \| sample name E-MTAB-5540:Leaf-prolonged-heat-replicate-3
3 SRP072680 Populus trichocarpa Transcriptome or Gene expression
loading	run	annotation	attributes
0.3973	SRR3317206		isolate tree2 \| tissue xylem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95631
0.3612	SRR3317189		isolate tree1 \| tissue xylem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95629
0.2864	SRR3317474		isolate tree4 \| tissue xylem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95635
-0.3323	SRR3317473		isolate tree4 \| tissue phloem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95634
-0.3391	SRR3317201		isolate tree2 \| tissue phloem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95630
-0.393	SRR3317207		isolate tree3 \| tissue phloem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95632
4 SRP072040 RNAseq of drought treated Populus trichocarpa
loading	run	annotation	attributes
0.3601	SRR3241533		days after drought treatment 5 day
0.2671	SRR3241532		days after drought treatment 5 day
0.2629	SRR3241531		days after drought treatment 5 day
-0.2321	SRR3241529		days after drought treatment 0 day
-0.3281	SRR3241527		days after drought treatment 0 day
-0.3473	SRR3241530		days after drought treatment 0 day
5 SRP071226 RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391)
loading	run	annotation	attributes
0.334	SRR3207899		gene perturbation type knockdown of MYB156 \| batch of trees NSF4
0.2937	SRR3207736		gene perturbation type knockdown of LIM2 \| batch of trees NSF2
0.2862	SRR3207882		gene perturbation type knockdown of C4H1 \| batch of trees NSF4
-0.2691	SRR3208022		gene perturbation type knockdown of CCoAOMT3 \| batch of trees NSF6
-0.3043	SRR3208048		gene perturbation type knockdown of AldOMT2 \| batch of trees NSF6
-0.3223	SRR3208023		gene perturbation type knockdown of CCoAOMT3 \| batch of trees NSF6
6 SRP201788 A genome assembly and the somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa [RNA-Seq]
loading	run	annotation	attributes
0.252	SRR9668924
0.207	SRR9668929
0.1844	SRR9668909
-0.1817	SRR9668900
-0.2251	SRR9321777
-0.2709	SRR9668903
7 SRP028843 SND1 Transcription Factor-Directed Quantitative Functional Hierarchical Genetic Regulatory Network in Wood Formation in Populus trichocarpa
loading	run	annotation	attributes
0.1944	SRR952889		transfection time 12 hours \| overexpressed gene sGFP (control)
0.1692	SRR952898		transfection time 12 hours \| overexpressed gene PtrSND1-B1+sGFP
0.1316	SRR952895		transfection time 7 hours \| overexpressed gene PtrSND1-B1+sGFP
-0.1195	SRR952900		transfection time 12 hours \| overexpressed gene PtrSND1-B1+sGFP
-0.1426	SRR952899		transfection time 12 hours \| overexpressed gene PtrSND1-B1+sGFP
-0.1981	SRR952893		transfection time 25 hours \| overexpressed gene sGFP (control)
8 SRP103219 Differential gene expression analysis of drought responsive sense and antisense genes in Populus
loading	run	annotation	attributes
0.2737	SRR5423519		source_name control_long-term_mature leaves \| type control \| drought treatment long-term \| molecule subtype mRNA
0.2735	SRR5423523		source_name control_long-term_mature leaves \| type control \| drought treatment long-term \| molecule subtype mRNA
0.2734	SRR5423520		source_name control_long-term_mature leaves \| type control \| drought treatment long-term \| molecule subtype mRNA
-0.1686	SRR5423426		source_name drought treated_short-term_mature leaves \| type drought treated \| drought treatment short-term \| molecule subtype total RNA
-0.1698	SRR5423424		source_name drought treated_short-term_mature leaves \| type drought treated \| drought treatment short-term \| molecule subtype total RNA
-0.1701	SRR5423430		source_name drought treated_short-term_mature leaves \| type drought treated \| drought treatment short-term \| molecule subtype total RNA
9 SRP271234 RNAseq of transfected protoplasts of Populus trichocarpa
loading	run	annotation	attributes
0.2174	SRR12192584		transfected genes PtrHSFB3-1
0.2158	SRR12192585		transfected genes PtrHSFB3-1
0.0736	SRR12192590		transfected genes PtrMYB092
-0.0721	SRR12192582		transfected genes GFP
-0.1366	SRR12192580		transfected genes GFP
-0.14	SRR12192581		transfected genes GFP
10 SRP035471 Ptr-miR397a is a negative regulator of laccase genes affecting lignin content in Populus trichocarpa
loading	run	annotation	attributes
0.1334	SRR1121298		genotype over expression miR397a
0.0731	SRR1121297		genotype over expression miR397a
0.0537	SRR1121296		genotype over expression miR397a
-0.1126	SRR1121293		genotype over expression miR397a
-0.1158	SRR1121303		genotype wild type
-0.1247	SRR1121302		genotype wild type

PCA Loading

1 SRP071226 RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391)
loading	run	annotation	attributes
0.3635	SRR3208053		gene perturbation type knockdown of MYB002,MYB021 \| batch of trees NSF6
0.3585	SRR3208003		gene perturbation type knockdown of 4CL3 \| batch of trees NSF6
0.3534	SRR3208005		gene perturbation type knockdown of 4CL3 \| batch of trees NSF6
-0.3543	SRR3207764		gene perturbation type knockdown of MYB221 \| batch of trees NSF2
-0.3624	SRR3207756		gene perturbation type knockdown of MYB090 \| batch of trees NSF2
-0.4832	SRR3207763		gene perturbation type knockdown of MYB221 \| batch of trees NSF2
2 ERP021848 High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
loading	run	annotation	attributes
0.3145	ERR1864445	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102896668 \| INSDC last update 2017-03-01T23:45:20Z \| Submitter Id E-MTAB-5540:Root-prolonged-drought-replicate-2 \| organism part root \| sample name E-MTAB-5540:Root-prolonged-drought-replicate-2
0.3141	ERR1864444	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102895918 \| INSDC last update 2017-03-01T23:45:20Z \| Submitter Id E-MTAB-5540:Root-prolonged-drought-replicate-1 \| organism part root \| sample name E-MTAB-5540:Root-prolonged-drought-replicate-1
0.2965	ERR1864446	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102897418 \| INSDC last update 2017-03-01T23:45:20Z \| Submitter Id E-MTAB-5540:Root-prolonged-drought-replicate-3 \| organism part root \| sample name E-MTAB-5540:Root-prolonged-drought-replicate-3
-0.2313	ERR1864436	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102889918 \| INSDC last update 2017-03-01T23:45:20Z \| Submitter Id E-MTAB-5540:Leaf-short-term-salt-replicate-2 \| organism part vascular leaf \| sample name E-MTAB-5540:Leaf-short-term-salt-replicate-2
-0.2399	ERR1864435	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102889168 \| INSDC last update 2017-03-01T23:45:20Z \| Submitter Id E-MTAB-5540:Leaf-short-term-salt-replicate-1 \| organism part vascular leaf \| sample name E-MTAB-5540:Leaf-short-term-salt-replicate-1
-0.2831	ERR1864478	Illumina HiSeq 2000 paired end sequencing; High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1	External Id SAMEA102921418 \| INSDC last update 2017-03-01T23:45:21Z \| Submitter Id E-MTAB-5540:Stem-xylem-prolonged-salt-replicate-2 \| organism part stem xylem \| sample name E-MTAB-5540:Stem-xylem-prolonged-salt-replicate-2
3 SRP028843 SND1 Transcription Factor-Directed Quantitative Functional Hierarchical Genetic Regulatory Network in Wood Formation in Populus trichocarpa
loading	run	annotation	attributes
0.2594	SRR952887		transfection time 7 hours \| overexpressed gene sGFP (control)
0.2102	SRR952896		transfection time 7 hours \| overexpressed gene PtrSND1-B1+sGFP
0.1904	SRR952886		transfection time 7 hours \| overexpressed gene sGFP (control)
-0.1658	SRR952891		transfection time 12 hours \| overexpressed gene sGFP (control)
-0.1752	SRR952900		transfection time 12 hours \| overexpressed gene PtrSND1-B1+sGFP
-0.1847	SRR952894		transfection time 25 hours \| overexpressed gene sGFP (control)
4 SRP074300 RNA-seq of major tissues and xylem cell types of Populus trichocarpa
loading	run	annotation	attributes
0.2211	SRR3473004		source_name Stem differentiating xylem \| tissue Stem differentiating xylem
0.16	SRR3472998		source_name Phloem \| tissue Phloem
0.1596	SRR3472992		source_name Shoot tip \| tissue Shoot tip
-0.2443	SRR3473007		source_name Xylem fiber cells \| tissue Xylem \| cell type Fiber cell
-0.2454	SRR3473006		source_name Xylem fiber cells \| tissue Xylem \| cell type Fiber cell
-0.2543	SRR3473008		source_name Xylem fiber cells \| tissue Xylem \| cell type Fiber cell
5 SRP201788 A genome assembly and the somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa [RNA-Seq]
loading	run	annotation	attributes
0.1989	SRR9321776
0.1844	SRR9668895
0.1828	SRR9668897
-0.1639	SRR9668927
-0.1757	SRR9668923
-0.244	SRR9668920
6 SRP103219 Differential gene expression analysis of drought responsive sense and antisense genes in Populus
loading	run	annotation	attributes
0.1965	SRR5423503		source_name control_long-term_young leaves \| type control \| drought treatment long-term \| tissue young leaves \| molecule subtype mRNA
0.1507	SRR5423435		source_name drought treated_short-term_mature leaves \| type drought treated \| drought treatment short-term \| tissue mature leaves \| molecule subtype total RNA
0.1479	SRR5423426		source_name drought treated_short-term_mature leaves \| type drought treated \| drought treatment short-term \| tissue mature leaves \| molecule subtype total RNA
-0.1796	SRR5423590		source_name drought treated_long-term_root \| type drought treated \| drought treatment long-term \| tissue root \| molecule subtype mRNA
-0.1915	SRR5423572		source_name control_long-term_root \| type control \| drought treatment long-term \| tissue root \| molecule subtype mRNA
-0.2104	SRR5423555		source_name control_long-term_root \| type control \| drought treatment long-term \| tissue root \| molecule subtype mRNA
7 SRP271234 RNAseq of transfected protoplasts of Populus trichocarpa
loading	run	annotation	attributes
0.1391	SRR12192594		transfected genes PtrMYB092
0.1375	SRR12192595		transfected genes PtrMYB092
0.1146	SRR12192584		transfected genes PtrHSFB3-1
-0.1159	SRR12192581		transfected genes GFP
-0.1988	SRR12192579		transfected genes GFP
-0.2041	SRR12192578		transfected genes GFP
8 SRP072680 Populus trichocarpa Transcriptome or Gene expression
loading	run	annotation	attributes
0.1172	SRR3317189		isolate tree1 \| tissue xylem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95629
0.1079	SRR3317476		isolate tree5 \| tissue phloem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95636
0.057	SRR3317480		isolate tree5 \| tissue xylem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95637
-0.1023	SRR3317207		isolate tree3 \| tissue phloem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95632
-0.1063	SRR3317206		isolate tree2 \| tissue xylem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95631
-0.1491	SRR3317201		isolate tree2 \| tissue phloem \| biomaterial_provider Groover Lab, Pacific Southwest Research Station, 1731 Research Park Drive, Davis, CA 95630
9 SRP072040 RNAseq of drought treated Populus trichocarpa
loading	run	annotation	attributes
0.1039	SRR3241535		days after drought treatment 7 day
0.0783	SRR3241536		days after drought treatment 7 day
0.0442	SRR3241531		days after drought treatment 5 day
-0.0535	SRR3241529		days after drought treatment 0 day
-0.085	SRR3241533		days after drought treatment 5 day
-0.2289	SRR3241532		days after drought treatment 5 day
10 SRP035471 Ptr-miR397a is a negative regulator of laccase genes affecting lignin content in Populus trichocarpa
loading	run	annotation	attributes
0.0944	SRR1121303		genotype wild type
0.0547	SRR1121293		genotype over expression miR397a
0.0498	SRR1121302		genotype wild type
-0.0445	SRR1121299		genotype over expression miR397a
-0.0518	SRR1121294		genotype over expression miR397a
-0.1018	SRR1121295		genotype over expression miR397a

Upper 100 Genes

Symbol	Function^*	Entrez Gene ID^*	Other ID	PC
LOC112323789	ribulose bisphosphate carboxylase large chain	112323789		22.65
LOC7474559	glyceraldehyde-3-phosphate dehydrogenase GAPB, chloroplastic	7474559	POPTR_002G007100v3	18.88
LOC7488408	phosphomannomutase/phosphoglucomutase	7488408	POPTR_008G131400v3	17.37
LOC7477443	phenolic glucoside malonyltransferase 1	7477443	POPTR_004G096300v3	15.29
LOC7471699	heavy metal-associated isoprenylated plant protein 47	7471699	POPTR_001G468500v3	14.97
LOC7468533	triacylglycerol lipase 2	7468533	POPTR_014G159800v3	14.94
LOC112323884	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic	112323884	POPTR_013G074800v3	14.31
LOC7496826	carbonic anhydrase 2	7496826	POPTR_001G348900v3	13.70
LOC7485534	thiamine thiazole synthase 2, chloroplastic	7485534	POPTR_011G025200v3	13.15
LOC18099625	abscisic stress-ripening protein 3	18099625	POPTR_005G193600v3	12.93
LOC7473220	uncharacterized LOC7473220	7473220	POPTR_008G189100v3	12.68
LOC7470700	GATA transcription factor 21	7470700	POPTR_006G229200v3	12.60
LOC18107754	GDSL esterase/lipase At4g30140	18107754	POPTR_018G089100v3	12.14
LOC18105327	protein ECERIFERUM 1	18105327	POPTR_014G152300v3	11.77
LOC7465173	peroxidase 4	7465173	POPTR_013G156400v3	11.28
LOC7489892	cellulose synthase-like protein H1	7489892	POPTR_002G227300v3	11.21
LOC18104342	metalloendoproteinase 1	18104342	POPTR_013G100400v3	10.93
LOC18100793	uncharacterized LOC18100793	18100793	POPTR_006G279200v3	10.83
LOC7469083	glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplastic	7469083	POPTR_008G195100v3	10.81
LOC18094143	ABC transporter B family member 2	18094143	POPTR_001G139700v3	10.69
LOC18100212	MLO-like protein 3	18100212	POPTR_006G129700v3	10.67
LOC7497387	indole-3-acetic acid-amido synthetase GH3.10	7497387	POPTR_013G144300v3	10.30
LOC18110360	GDSL esterase/lipase At5g45670	18110360	POPTR_018G089300v3	10.24
LOC7463142	11-beta-hydroxysteroid dehydrogenase 1B	7463142	POPTR_015G099900v3	10.18
LOC7488951	GDSL esterase/lipase At1g29660	7488951	POPTR_018G088800v3	10.13
LOC7461668	transcription factor FAMA	7461668	POPTR_001G314400v3	10.09
LOC112326879	auxin-binding protein ABP19a-like	112326879	POPTR_003G065300v3	10.05
LOC7458811	RING-H2 finger protein ATL73	7458811	POPTR_019G130100v3	9.98
LOC18105329	protein ECERIFERUM 1	18105329	POPTR_014G152600v3	9.93
LOC7476747	21 kDa protein	7476747	POPTR_015G128200v3	9.89
LOC7475695	auxin-binding protein ABP19a	7475695	POPTR_013G141900v3	9.80
LOC7488717	mitoferrin	7488717	POPTR_016G125200v3	9.69
LOC7485279	protein ECERIFERUM 3	7485279	POPTR_006G177500v3	9.11
LOC18103394	G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290	18103394	POPTR_T023400v3	9.00
LOC7485626	high mobility group B protein 9	7485626	POPTR_005G246700v3	8.92
LOC7474554	protein PLASTID MOVEMENT IMPAIRED 1	7474554	POPTR_002G006100v3	8.91
LOC7454978	photosystem II 10 kDa polypeptide, chloroplastic	7454978	POPTR_011G142200v3	8.87
LOC7484386	WD repeat-containing protein RUP2	7484386	POPTR_012G140200v3	8.50
LOC18110359	GDSL esterase/lipase At1g29670	18110359	POPTR_018G089200v3	8.43
LOC18096332	axial regulator YABBY 1	18096332	POPTR_002G145100v3	8.40
LOC7461684	ABC transporter G family member 11	7461684	POPTR_001G311500v3	8.33
LOC7461568	GDSL esterase/lipase At1g29670	7461568	POPTR_018G088500v3	8.18
LOC7494801	very-long-chain 3-oxoacyl-CoA reductase-like protein At1g24470	7494801	POPTR_008G181600v3	8.05
LOC7464926	putative ripening-related protein 1	7464926	POPTR_014G082700v3	8.04
LOC7457566	uncharacterized LOC7457566	7457566	POPTR_009G094100v3	7.95
LOC7475097	uncharacterized LOC7475097	7475097	POPTR_001G188700v3	7.93
LOC7470576	uncharacterized LOC7470576	7470576	POPTR_001G188400v3	7.88
psbL	photosystem II protein L	4929685	Poptr_cp038	7.67
LOC7454979	(-)-germacrene D synthase	7454979	POPTR_011G142800v3	7.55
LOC7494760	ammonium transporter 1 member 1	7494760	POPTR_008G173800v3	7.50
LOC7497425	protein NUCLEAR FUSION DEFECTIVE 4	7497425	POPTR_013G154000v3	7.48
LOC18105332	protein ECERIFERUM 1	18105332	POPTR_014G152900v3	7.45
LOC7490946	auxin-binding protein ABP19a	7490946	POPTR_001G169000v3	7.30
LOC7486657	cyanogenic beta-glucosidase	7486657	POPTR_001G225900v3	7.28
LOC7468122	galactinol synthase 1	7468122	POPTR_010G150400v3	7.12
LOC18094956	cyanogenic beta-glucosidase	18094956	POPTR_001G226100v3	7.00
LOC7497748	uncharacterized LOC7497748	7497748	POPTR_007G003600v3	6.93
LOC18098821	uncharacterized LOC18098821	18098821	POPTR_005G037600v3	6.73
LOC7469566	transcription activator GLK1	7469566	POPTR_007G136900v3	6.71
LOC7494283	indole-3-acetic acid-induced protein ARG7	7494283	POPTR_009G126700v3	6.55
LOC7496915	ABC transporter B family member 13	7496915	POPTR_002G019600v3	6.51
LOC18099931	uncharacterized LOC18099931	18099931		6.48
LOC7461760	O-glucosyltransferase rumi homolog	7461760	POPTR_002G157800v3	6.48
LOC7489432	GDSL esterase/lipase At1g29670	7489432	POPTR_018G089400v3	6.44
LOC18107988	pelargonidin 3-O-(6-caffeoylglucoside) 5-O-(6-O-malonylglucoside) 4'''-malonyltransferase	18107988	POPTR_019G001200v3	6.41
LOC18109921	eugenol synthase 1	18109921	POPTR_013G103900v3	6.29
LOC7495972	myb-related protein 306	7495972	POPTR_017G082500v3	6.28
LOC7479199	peroxisomal membrane protein 11B	7479199	POPTR_003G108900v3	6.13
LOC7470927	uncharacterized LOC7470927	7470927	POPTR_011G132900v3	6.09
LOC7461284	transcription factor FAMA	7461284	POPTR_017G054500v3	5.94
LOC7470242	uncharacterized LOC7470242	7470242	POPTR_004G050600v3	5.88
LOC18106312	uncharacterized LOC18106312	18106312		5.77
LOC18097807	probable carboxylesterase 1	18097807	POPTR_004G142900v3	5.65
LOC18104108	tyrosine decarboxylase 1	18104108	POPTR_013G052900v3	5.64
LOC7469878	protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5	7469878	POPTR_019G034000v3	5.48
LOC18104308	eugenol synthase 1	18104308	POPTR_013G104000v3	5.34
LOC7463791	UDP-glycosyltransferase 79B6	7463791	POPTR_011G097900v3	5.29
LOC7493527	BEL1-like homeodomain protein 11	7493527	POPTR_005G232000v3	5.03
LOC112325786	transcription activator GLK1-like	112325786	POPTR_T098900v3	4.98
LOC18108586	indole-3-acetic acid-amido synthetase GH3.10	18108586	POPTR_019G103500v3	4.93
LOC7461571	GDSL esterase/lipase At1g29660	7461571	POPTR_018G088600v3	4.59
LOC7473472	sphingolipid C9-methyltransferase 2	7473472	POPTR_008G170300v3	4.45
LOC18098121	uncharacterized LOC18098121	18098121	POPTR_004G202900v3	4.40
LOC7458281	GDSL esterase/lipase At2g42990	7458281	POPTR_002G219700v3	4.36
LOC7488356	3-ketoacyl-CoA synthase 6	7488356	POPTR_008G120300v3	4.36
LOC7463062	transcription factor TCP13	7463062	POPTR_T146100v3	4.35
LOC7468536	GDSL esterase/lipase At2g04570	7468536	POPTR_014G160100v3	4.34
LOC7462884	abscisic acid 8'-hydroxylase 4	7462884	POPTR_002G126100v3	4.27
LOC7495248	pectinesterase inhibitor 6	7495248	POPTR_014G129400v3	4.25
LOC18107914	ABC transporter G family member 11	18107914	POPTR_018G152600v3	4.22
LOC7493492	WUSCHEL-related homeobox 1	7493492	POPTR_012G047700v3	3.94
LOC7464028	protein RADIALIS-like 2	7464028	POPTR_009G116600v3	3.92
LOC7476749	21 kDa protein	7476749	POPTR_015G128400v3	3.91
LOC18106924	3-oxo-Delta(4,5)-steroid 5-beta-reductase	18106924	POPTR_017G030400v3	3.85
LOC112327900	ABC transporter G family member 11-like	112327900	POPTR_001G312200v3	3.84
LOC7476301	GDSL esterase/lipase At1g29670	7476301	POPTR_004G064500v3	3.76
LOC7468347	uncharacterized protein PAM68-like	7468347	POPTR_004G072900v3	3.57
LOC7493857	protein DETOXIFICATION 24	7493857	POPTR_013G069200v3	3.56
LOC7478666	uncharacterized LOC7478666	7478666	POPTR_001G292000v3	3.55
LOC7471087	galactinol synthase 1	7471087	POPTR_008G101000v3	3.47

Upper 100 Genes

Symbol	Function^*	Entrez Gene ID^*	Other ID	PC
LOC7470544	uncharacterized LOC7470544	7470544	POPTR_001G204300v3	70.71
psbA	photosystem II protein D1	4929629	Poptr_cp001	69.37
LOC7484743	photosynthetic NDH subunit of subcomplex B 4, chloroplastic	7484743	POPTR_012G068500v3	67.30
LOC18096313	J domain-containing protein required for chloroplast accumulation response 1	18096313	POPTR_002G134300v3	66.48
LOC7494389	uncharacterized LOC7494389	7494389	POPTR_013G090200v3	61.76
LOC7465539	protein DETOXIFICATION 27	7465539	POPTR_007G010200v3	60.96
LOC7470027	fructose-bisphosphate aldolase 1, chloroplastic	7470027	POPTR_004G162400v3	60.75
LOC7453596	sodium/calcium exchanger NCL2	7453596	POPTR_001G375400v3	60.75
LOC7473428	1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 1	7473428	POPTR_008G157400v3	59.26
LOC7462891	BRI1 kinase inhibitor 1	7462891	POPTR_002G127100v3	58.96
LOC7494712	glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic	7494712	POPTR_005G254100v3	58.61
LOC7484859	ACT domain-containing protein ACR6	7484859	POPTR_012G102200v3	58.22
LOC7460752	uncharacterized LOC7460752	7460752	POPTR_010G046400v3	58.14
LOC18096946	glycine cleavage system H protein 3, mitochondrial	18096946	POPTR_003G089300v3	57.60
LOC7478511	glucan endo-1,3-beta-glucosidase	7478511	POPTR_001G255100v3	57.52
LOC7493921	uncharacterized LOC7493921	7493921	POPTR_013G085300v3	57.39
rbcL	ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit	4929677	Poptr_cp030	57.30
LOC18095522	peroxisomal (S)-2-hydroxy-acid oxidase	18095522	POPTR_001G394400v3	57.28
LOC18094258	photosynthetic NDH subunit of subcomplex B 1, chloroplastic	18094258	POPTR_001G044300v3	57.27
LOC7488015	chlorophyll a-b binding protein CP29.3, chloroplastic	7488015	POPTR_008G067300v3	57.26
LOC7494720	protein PLASTID MOVEMENT IMPAIRED 1	7494720	POPTR_005G255500v3	57.07
LOC7458470	cellulose synthase-like protein E6	7458470	POPTR_006G004300v3	57.02
LOC7458602	photosynthetic NDH subunit of lumenal location 1, chloroplastic	7458602	POPTR_010G210000v3	56.75
LOC7463993	fructose-bisphosphate aldolase 1, chloroplastic	7463993	POPTR_009G124100v3	56.69
LOC18099496	ribulose bisphosphate carboxylase small chain, chloroplastic	18099496	POPTR_017G114600v3	56.54
LOC18096890	expansin-like B1	18096890	POPTR_003G083200v3	56.27
rps14	ribosomal protein S14	4929661	Poptr_cp020	56.19
LOC7495216	calvin cycle protein CP12-2, chloroplastic	7495216	POPTR_014G120700v3	56.01
LOC7486795	homeobox-leucine zipper protein ATHB-7	7486795	POPTR_014G103000v3	55.91
LOC18104499	ATP synthase delta chain, chloroplastic	18104499	POPTR_013G117000v3	55.67
LOC112324764	uncharacterized LOC112324764	112324764		55.62
LOC18107608	putative GATA transcription factor 22	18107608	POPTR_018G053600v3	55.47
LOC7465099	abscisic acid 8'-hydroxylase 2	7465099	POPTR_001G242600v3	55.34
LOC7461652	probable sucrose-phosphate synthase 3	7461652	POPTR_001G317600v3	55.32
LOC112324789	berberine bridge enzyme-like 8	112324789	POPTR_001G462400v3	55.17
psaA	photosystem I P700 chlorophyll a apoprotein A1	4929663	Poptr_cp022	54.88
LOC18094096	phosphoribulokinase, chloroplastic	18094096	POPTR_001G134000v3	54.78
LOC112327176	transcription factor TCP13	112327176	POPTR_004G116100v3	54.77
LOC7460564	uncharacterized LOC7460564	7460564	POPTR_001G059500v3	54.72
LOC7463062	transcription factor TCP13	7463062	POPTR_T146100v3	54.70
LOC7488717	mitoferrin	7488717	POPTR_016G125200v3	54.65
psaB	photosystem I P700 chlorophyll a apoprotein A2	4929662	Poptr_cp021	54.52
LOC7454978	photosystem II 10 kDa polypeptide, chloroplastic	7454978	POPTR_011G142200v3	54.42
LOC7470239	uncharacterized LOC7470239	7470239	POPTR_004G051500v3	54.18
LOC18104420	NAD(P)H-quinone oxidoreductase subunit T, chloroplastic	18104420	POPTR_013G109000v3	54.03
LOC7490927	PGR5-like protein 1A, chloroplastic	7490927	POPTR_001G113000v3	53.93
LOC18110663	ankyrin repeat-containing protein At5g02620	18110663	POPTR_019G107800v3	53.83
LOC7478371	boron transporter 4	7478371	POPTR_003G059700v3	53.45
LOC112325189	metallothionein-like protein type 3	112325189	POPTR_001G400100v3	53.40
LOC18110661	ankyrin repeat-containing protein At5g02620	18110661	POPTR_019G105900v3	53.39
LOC7459773	NAD(P)H-quinone oxidoreductase subunit L, chloroplastic	7459773	POPTR_010G110400v3	53.32
LOC7485810	basic leucine zipper 1	7485810	POPTR_010G142900v3	53.31
LOC7475781	carboxymethylenebutenolidase homolog	7475781	POPTR_019G079000v3	53.28
LOC7495652	uncharacterized LOC7495652	7495652	POPTR_006G025200v3	53.17
LOC7484381	low-temperature-induced 65 kDa protein	7484381	POPTR_012G141300v3	53.17
LOC18109283	universal stress protein A-like protein	18109283	POPTR_014G122000v3	53.09
LOC7485534	thiamine thiazole synthase 2, chloroplastic	7485534	POPTR_011G025200v3	52.98
LOC7469191	2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial	7469191	POPTR_005G185400v3	52.88
LOC18108612	ankyrin repeat-containing protein At5g02620	18108612	POPTR_019G107700v3	52.81
psbE	photosystem II protein V	4929687	Poptr_cp040	52.70
LOC7496048	linoleate 13S-lipoxygenase 2-1, chloroplastic	7496048	POPTR_001G015400v3	52.70
LOC7463155	photosystem II 22 kDa protein, chloroplastic	7463155	POPTR_002G083500v3	52.70
LOC7455512	serine hydroxymethyltransferase 1, mitochondrial	7455512	POPTR_010G254700v3	52.69
LOC18099625	abscisic stress-ripening protein 3	18099625	POPTR_005G193600v3	52.54
LOC18107022	isoprene synthase, chloroplastic	18107022	POPTR_017G041700v3	52.25
LOC18095468	polyphenol oxidase, chloroplastic	18095468	POPTR_001G388900v3	52.22
LOC7489649	NAC transcription factor 47	7489649	POPTR_013G054000v3	52.17
LOC7466033	fructose-1,6-bisphosphatase, chloroplastic	7466033	POPTR_016G106900v3	52.06
LOC7468347	uncharacterized protein PAM68-like	7468347	POPTR_004G072900v3	51.96
LOC18101595	1-aminocyclopropane-1-carboxylate oxidase homolog 1	18101595	POPTR_008G165400v3	51.92
LOC18099186	chaperone protein dnaJ 11, chloroplastic	18099186	POPTR_005G113100v3	51.86
LOC18096085	probable nucleoredoxin 2	18096085	POPTR_002G017200v3	51.84
LOC7478091	geraniol 8-hydroxylase	7478091	POPTR_001G113900v3	51.73
LOC7498046	photosynthetic NDH subunit of subcomplex B 5, chloroplastic	7498046	POPTR_010G078800v3	51.72
LOC7495269	sugar carrier protein C	7495269	POPTR_011G042100v3	51.72
LOC7477424	ribulose bisphosphate carboxylase small chain, chloroplastic	7477424	POPTR_004G100000v3	51.70
LOC7461489	uncharacterized LOC7461489	7461489	POPTR_002G256900v3	51.69
LOC7456397	protein TIC 62, chloroplastic	7456397	POPTR_009G111400v3	51.68
LOC7492113	NAC domain-containing protein 21/22	7492113	POPTR_005G098200v3	51.59
LOC7497748	uncharacterized LOC7497748	7497748	POPTR_007G003600v3	51.55
LOC7461601	uncharacterized protein At4g14100	7461601	POPTR_T094000v3	51.54
LOC7457777	uncharacterized LOC7457777	7457777	POPTR_015G084200v3	51.54
psbJ	photosystem II protein J	4929684	Poptr_cp037	51.51
LOC7477824	metal-nicotianamine transporter YSL1	7477824	POPTR_001G084400v3	51.47
LOC7464751	NAD(P)H-quinone oxidoreductase subunit N, chloroplastic	7464751	POPTR_013G160600v3	51.37
LOC7477130	uncharacterized LOC7477130	7477130	POPTR_005G084400v3	51.28
LOC7491901	type I inositol polyphosphate 5-phosphatase 2	7491901	POPTR_003G088300v3	51.14
LOC112324528	fructose-1,6-bisphosphatase, chloroplastic-like	112324528	POPTR_016G108900v3	51.05
LOC7492123	catalase-2	7492123	POPTR_005G100400v3	51.04
LOC7472471	2-methylene-furan-3-one reductase	7472471	POPTR_016G136100v3	51.03
psbD	photosystem II protein D2	4929654	Poptr_cp016	50.97
LOC7453636	chaperone protein dnaJ 11, chloroplastic	7453636	POPTR_004G172300v3	50.90
LOC7458129	ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic	7458129	POPTR_010G200500v3	50.76
atpB	ATP synthase CF1 beta subunit	4929676	Poptr_cp029	50.73
LOC7497858	glutaredoxin domain-containing cysteine-rich protein 1	7497858	POPTR_003G141800v3	50.66
LOC7474554	protein PLASTID MOVEMENT IMPAIRED 1	7474554	POPTR_002G006100v3	50.56
LOC18104570	serine carboxypeptidase-like 3	18104570	POPTR_013G124900v3	50.53
LOC7475965	monothiol glutaredoxin-S2	7475965	POPTR_010G021800v3	50.45
LOC7479199	peroxisomal membrane protein 11B	7479199	POPTR_003G108900v3	50.40
LOC7494653	root phototropism protein 2	7494653	POPTR_019G131600v3	50.37

Upper 100 Genes

Symbol	Function^*	Entrez Gene ID^*	Other ID	PC
LOC7485810	basic leucine zipper 1	7485810	POPTR_010G142900v3	61.70
LOC18100635	uncharacterized LOC18100635	18100635		61.58
LOC7493967	snakin-2	7493967	POPTR_T155100v3	60.83
LOC7492427	glu S.griseus protease inhibitor	7492427	POPTR_010G075400v3	59.07
LOC18104336	bark storage protein B	18104336	POPTR_013G101000v3	57.47
LOC7481640	CASP-like protein 1D1	7481640	POPTR_008G205000v3	57.38
LOC18096890	expansin-like B1	18096890	POPTR_003G083200v3	56.68
LOC7496123	zeatin O-glucosyltransferase	7496123	POPTR_006G048200v3	56.59
LOC7491938	uncharacterized LOC7491938	7491938		55.73
LOC7492113	NAC domain-containing protein 21/22	7492113	POPTR_005G098200v3	55.05
LOC18101623	probable glutathione S-transferase	18101623	POPTR_008G175100v3	54.89
LOC7474610	pro-hevein	7474610	POPTR_013G041600v3	54.82
LOC7470435	endochitinase 2	7470435	POPTR_004G182000v3	54.62
LOC7475437	cell wall / vacuolar inhibitor of fructosidase 1	7475437	POPTR_010G063000v3	54.46
LOC112325259	wound-responsive protein GWIN3-like	112325259	POPTR_019G124500v3	54.37
LOC7459997	myb-related protein 305	7459997	POPTR_010G064000v3	54.20
LOC7480705	basic 7S globulin	7480705	POPTR_002G054900v3	54.15
LOC18108653	wound-responsive protein GWIN3	18108653	POPTR_019G122100v3	53.49
LOC112325152	wound-responsive protein GWIN3-like	112325152	POPTR_019G124700v3	53.45
LOC7488130	uncharacterized LOC7488130	7488130		53.44
LOC7460421	protein LURP-one-related 15	7460421	POPTR_016G131600v3	53.41
LOC7482890	MLP-like protein 328	7482890	POPTR_008G131200v3	52.85
LOC7478024	probable polyol transporter 3	7478024	POPTR_007G027900v3	52.77
LOC18104481	sucrose transport protein SUC8	18104481	POPTR_013G115200v3	52.33
LOC7480097	cytochrome P450 87A3	7480097	POPTR_001G270400v3	51.79
LOC7495163	7-deoxyloganetin glucosyltransferase	7495163	POPTR_002G098400v3	51.11
LOC18103911	extensin-1	18103911	POPTR_012G120700v3	50.76
LOC18103031	uncharacterized LOC18103031	18103031	POPTR_011G053300v3	50.68
LOC7478026	phosphatidylinositol transfer protein 3	7478026	POPTR_007G025900v3	50.46
LOC7495964	uncharacterized LOC7495964	7495964		49.85
LOC7464930	cationic peroxidase 1	7464930	POPTR_013G154400v3	49.72
LOC18104339	bark storage protein A	18104339	POPTR_013G100700v3	49.63
LOC7478680	pathogenesis-related protein 1	7478680	POPTR_001G288600v3	49.63
LOC18102814	major allergen Pru ar 1	18102814	POPTR_011G026200v3	49.53
LOC18108092	alpha-amylase/subtilisin inhibitor	18108092	POPTR_019G011000v3	49.48
LOC7494660	probable glutathione S-transferase parA	7494660	POPTR_019G130600v3	49.40
LOC7471112	bZIP transcription factor 53	7471112	POPTR_008G106700v3	49.29
LOC7489112	cannabidiolic acid synthase-like 1	7489112	POPTR_011G158100v3	49.13
LOC7477401	uncharacterized LOC7477401	7477401	POPTR_004G044300v3	49.11
LOC7494050	BON1-associated protein 2	7494050	POPTR_002G155300v3	49.04
LOC7463865	cytochrome P450 705A5	7463865	POPTR_001G270900v3	48.84
LOC18097308	miraculin	18097308	POPTR_004G000400v3	48.59
LOC18101322	putative glycine-rich cell wall structural protein 1	18101322	POPTR_008G028100v3	48.23
LOC7484341	ethylene-responsive transcription factor ERF113	7484341	POPTR_012G108500v3	48.13
LOC7497347	putative expansin-B2	7497347	POPTR_014G066300v3	48.11
LOC7469862	NAC transcription factor 47	7469862	POPTR_019G031400v3	47.92
LOC18094172	AT-hook motif nuclear-localized protein 23	18094172	POPTR_001G142800v3	47.92
LOC7478098	AT-hook motif nuclear-localized protein 26	7478098	POPTR_001G115200v3	47.86
LOC18108801	probable glutathione S-transferase	18108801	POPTR_008G175000v3	47.65
LOC18106197	uncharacterized LOC18106197	18106197		47.64
LOC112323232	probable glutathione S-transferase parA	112323232	POPTR_T178900v3	47.35
LOC7488716	peroxidase N1	7488716	POPTR_016G125000v3	47.01
LOC7482802	bidirectional sugar transporter SWEET15	7482802	POPTR_001G060900v3	46.95
LOC7489720	peroxidase 10	7489720	POPTR_005G135300v3	46.82
LOC7468636	uncharacterized LOC7468636	7468636	POPTR_006G254300v3	46.77
LOC7492415	ethylene-responsive transcription factor 1B	7492415	POPTR_010G072300v3	46.76
LOC112325750	leucine-rich repeat extensin-like protein 3	112325750	POPTR_T089100v3	46.76
LOC7455621	F-box/kelch-repeat protein At1g15670	7455621	POPTR_006G196900v3	46.54
LOC7492425	AT-hook motif nuclear-localized protein 20	7492425	POPTR_010G074200v3	46.44
LOC7463352	3-hydroxy-3-methylglutaryl-coenzyme A reductase 1	7463352	POPTR_009G169900v3	46.41
LOC18104971	cytochrome P450 CYP82D47	18104971	POPTR_014G037900v3	46.31
LOC7464012	protein CASPARIAN STRIP INTEGRITY FACTOR 1	7464012	POPTR_009G119900v3	46.06
LOC18094584	ethylene-responsive transcription factor 2	18094584	POPTR_001G154100v3	45.93
LOC18095117	cytochrome P450 87A3	18095117	POPTR_001G270500v3	45.77
LOC7463862	cytochrome P450 87A3	7463862	POPTR_001G270600v3	45.71
LOC7474965	basic endochitinase	7474965	POPTR_009G141700v3	45.70
LOC7457797	nudix hydrolase 18, mitochondrial	7457797	POPTR_008G134000v3	45.46
LOC7494600	seed biotin-containing protein SBP65	7494600	POPTR_019G090300v3	45.45
LOC18106458	heavy metal-associated isoprenylated plant protein 39	18106458	POPTR_017G147400v3	45.28
LOC18106689	kunitz trypsin inhibitor 2	18106689	POPTR_017G153200v3	45.27
LOC112328702	uncharacterized LOC112328702	112328702		45.22
LOC18102120	salicylic acid-binding protein 2	18102120	POPTR_009G107300v3	45.12
LOC7474032	CEN-like protein 1	7474032	POPTR_015G141300v3	44.83
LOC7479328	osmotin-like protein OSM34	7479328	POPTR_001G107600v3	44.83
LOC7474976	acetylserotonin O-methyltransferase	7474976	POPTR_009G139700v3	44.75
LOC7460419	protein LURP-one-related 15	7460419	POPTR_016G131400v3	44.53
LOC7465813	AT-hook motif nuclear-localized protein 24	7465813	POPTR_003G116900v3	44.33
LOC7482889	MLP-like protein 43	7482889	POPTR_008G131100v3	44.33
LOC18104932	patatin-like protein 2	18104932	POPTR_014G034000v3	44.13
LOC112326887	extensin-2-like	112326887	POPTR_001G019900v3	43.84
LOC18103101	pathogenesis-related genes transcriptional activator PTI5	18103101	POPTR_011G061700v3	43.74
LOC7461382	peroxidase 15	7461382	POPTR_003G214900v3	43.69
LOC7485450	polyphenol oxidase, chloroplastic	7485450	POPTR_011G047300v3	43.64
LOC112327227	germin-like protein subfamily 1 member 13	112327227	POPTR_004G180000v3	43.54
LOC112328218	extensin-2-like	112328218	POPTR_001G020000v3	43.51
LOC7460657	endoglucanase 12	7460657	POPTR_008G079500v3	43.45
LOC7484381	low-temperature-induced 65 kDa protein	7484381	POPTR_012G141300v3	43.45
LOC7480906	glutathione transferase GST 23	7480906	POPTR_008G174900v3	43.39
LOC7483782	cytochrome P450 734A1	7483782	POPTR_002G134500v3	43.32
LOC7490361	uncharacterized LOC7490361	7490361	POPTR_010G196400v3	43.29
LOC7487693	AT-hook motif nuclear-localized protein 19	7487693	POPTR_013G044500v3	43.07
LOC7498031	uncharacterized LOC7498031	7498031		42.99
LOC7489699	GDSL esterase/lipase 1	7489699	POPTR_013G065100v3	42.97
LOC7485893	uncharacterized LOC7485893	7485893		42.61
LOC112327209	germin-like protein subfamily 1 member 16	112327209	POPTR_004G180200v3	42.45
LOC7483295	GDSL esterase/lipase At1g74460	7483295	POPTR_012G068700v3	42.40
LOC7461573	peroxidase 45	7461573	POPTR_018G089900v3	42.36
LOC7457517	uncharacterized LOC7457517	7457517	POPTR_009G106000v3	42.16
LOC7489265	probable esterase PIR7A	7489265	POPTR_009G107500v3	42.04
LOC7485536	major allergen Pru ar 1	7485536	POPTR_011G026000v3	42.04

Upper 100 Genes

Symbol	Function^*	Entrez Gene ID^*	Other ID	PC
LOC7463703	microtubule-associated protein 70-5	7463703	POPTR_006G018000v3	41.47
LOC7468619	L-type lectin-domain containing receptor kinase I.8	7468619	POPTR_009G035800v3	36.07
LOC7494473	laccase-4	7494473	POPTR_008G064000v3	35.15
LOC18106496	protein TPX2	18106496	POPTR_T059900v3	34.87
LOC18099998	dynein light chain LC6, flagellar outer arm	18099998	POPTR_006G091800v3	34.80
LOC7467100	probable GABA transporter 2	7467100	POPTR_001G093600v3	34.76
LOC7461839	oligopeptide transporter 2	7461839	POPTR_002G109300v3	34.53
LOC7491458	plasma membrane-associated cation-binding protein 1	7491458	POPTR_001G073900v3	34.32
LOC7454937	laccase-17	7454937	POPTR_006G087500v3	34.27
LOC7495835	fasciclin-like arabinogalactan protein 12	7495835	POPTR_001G320800v3	33.33
LOC18103191	uncharacterized LOC18103191	18103191		33.22
LOC112328687	uncharacterized LOC112328687	112328687		32.77
LOC7494613	probable carotenoid cleavage dioxygenase 4, chloroplastic	7494613	POPTR_019G093400v3	31.77
LOC7483653	E3 ubiquitin-protein ligase At4g11680	7483653	POPTR_011G094800v3	31.70
LOC7471179	protein NRT1/ PTR FAMILY 4.2	7471179	POPTR_002G249100v3	31.70
LOC18094569	pelargonidin 3-O-(6-caffeoylglucoside) 5-O-(6-O-malonylglucoside) 4'''-malonyltransferase	18094569	POPTR_001G152500v3	31.61
LOC7494563	protein trichome birefringence-like 19	7494563	POPTR_004G105600v3	31.34
LOC7474082	microtubule-associated protein 70-5	7474082	POPTR_016G006900v3	31.20
LOC7474685	protein LURP-one-related 12	7474685	POPTR_006G067000v3	31.09
LOC7496936	SPX domain-containing membrane protein At4g22990	7496936	POPTR_014G078000v3	30.93
LOC7475075	laccase-2	7475075	POPTR_001G184300v3	30.89
LOC7473193	transcription factor HBI1	7473193	POPTR_007G023600v3	30.72
LOC18094393	protein ODORANT1	18094393	POPTR_001G118800v3	30.46
LOC18111132	glucuronoxylan 4-O-methyltransferase 1	18111132		30.41
LOC18102212	laccase-2	18102212	POPTR_009G156800v3	30.30
LOC7460060	glucan endo-1,3-beta-glucosidase 14	7460060	POPTR_009G163700v3	30.20
LOC18094088	bifunctional pinoresinol-lariciresinol reductase 2	18094088	POPTR_001G133200v3	29.89
LOC7486803	NAC domain-containing protein 43	7486803	POPTR_014G104800v3	29.83
LOC7466052	laccase-4	7466052	POPTR_016G112000v3	29.54
LOC7492393	galactinol synthase 1	7492393	POPTR_010G042000v3	29.43
LOC112326964	uncharacterized LOC112326964	112326964		29.38
LOC7489682	E3 ubiquitin-protein ligase SIRP1	7489682	POPTR_013G060500v3	29.37
LOC7490852	beta-glucuronosyltransferase GlcAT14A	7490852	POPTR_008G006500v3	29.37
LOC7493878	RING-H2 finger protein ATL52	7493878	POPTR_013G073500v3	29.36
LOC7487740	NAC domain-containing protein 43	7487740	POPTR_002G178700v3	29.30
LOC7455257	metalloendoproteinase 2-MMP	7455257	POPTR_019G073400v3	29.08
LOC18102210	laccase-2	18102210	POPTR_009G156600v3	29.08
LOC7468684	CBL-interacting serine/threonine-protein kinase 25	7468684	POPTR_006G263500v3	28.61
LOC18104918	uncharacterized LOC18104918	18104918	POPTR_014G032300v3	28.60
LOC7465150	zinc finger CCCH domain-containing protein 56	7465150	POPTR_001G258400v3	28.55
LOC7467609	probable beta-1,4-xylosyltransferase IRX9	7467609	POPTR_016G086400v3	28.45
LOC7458573	cysteine-rich receptor-like protein kinase 10	7458573	POPTR_004G024100v3	28.38
LOC7475190	fasciclin-like arabinogalactan protein 12	7475190	POPTR_015G013300v3	28.37
LOC7461337	kinesin-like protein KIN-14T	7461337		28.33
LOC7467861	1-aminocyclopropane-1-carboxylate oxidase 5	7467861	POPTR_002G078600v3	28.14
LOC7472295	O-fucosyltransferase 8	7472295	POPTR_011G068300v3	28.12
LOC7496525	probable beta-1,4-xylosyltransferase IRX10	7496525	POPTR_003G162000v3	28.05
LOC18101343	uncharacterized LOC18101343	18101343	POPTR_008G030200v3	27.99
LOC7477065	uncharacterized LOC7477065	7477065	POPTR_010G052100v3	27.89
LOC7495213	uncharacterized LOC7495213	7495213	POPTR_014G119900v3	27.83
LOC18100114	myosin-11	18100114	POPTR_006G120400v3	27.83
LOC7482638	uncharacterized LOC7482638	7482638	POPTR_016G006200v3	27.70
LOC7481523	laccase-2	7481523	POPTR_009G034500v3	27.68
LOC7457267	laccase-4	7457267	POPTR_010G193100v3	27.56
LOC18095407	probable xyloglucan galactosyltransferase GT17	18095407	POPTR_001G382200v3	27.47
LOC7488157	uncharacterized LOC7488157	7488157	POPTR_009G024700v3	27.38
LOC7495847	probable inorganic phosphate transporter 1-5	7495847	POPTR_001G318500v3	27.35
LOC7483772	probable galacturonosyltransferase-like 1	7483772	POPTR_002G132900v3	27.24
LOC18100226	probable beta-1,4-xylosyltransferase IRX9	18100226	POPTR_006G131000v3	27.18
LOC7462100	laccase-12	7462100	POPTR_008G073700v3	27.17
LOC18101650	receptor-like protein 1	18101650	POPTR_001G064600v3	27.02
LOC7464268	fasciclin-like arabinogalactan protein 12	7464268		26.95
LOC7468582	laccase-4	7468582	POPTR_009G042500v3	26.84
LOC7460461	uncharacterized LOC7460461	7460461	POPTR_002G195400v3	26.81
LOC7468487	probable pectinesterase/pectinesterase inhibitor 35	7468487	POPTR_014G149700v3	26.80
LOC7457387	protein trichome birefringence-like 26	7457387	POPTR_002G168400v3	26.74
LOC18101485	DNA-3-methyladenine glycosylase 1	18101485	POPTR_008G112300v3	26.72
LOC7463299	fasciclin-like arabinogalactan protein 12	7463299	POPTR_009G012100v3	26.58
LOC18097764	ferrochelatase-2, chloroplastic	18097764	POPTR_004G138400v3	26.54
LOC18095892	probable galacturonosyltransferase 12	18095892	POPTR_001G416800v3	26.49
LOC112325065	uncharacterized LOC112325065	112325065		26.41
LOC7498200	uncharacterized LOC7498200	7498200	POPTR_008G092700v3	26.40
LOC7463651	uncharacterized LOC7463651	7463651	POPTR_006G005600v3	26.32
LOC18101659	receptor-like protein 15	18101659	POPTR_001G063900v3	26.32
LOC7470925	probable galacturonosyltransferase 12	7470925	POPTR_011G132600v3	26.32
LOC7466087	protein trichome birefringence-like 3	7466087	POPTR_016G119100v3	26.23
LOC18107084	probable sucrose-phosphate synthase 3	18107084	POPTR_017G057800v3	26.22
LOC18103099	rac-like GTP-binding protein RAC13	18103099	POPTR_011G061500v3	26.21
LOC7462153	uncharacterized LOC7462153	7462153	POPTR_008G084100v3	26.15
LOC7470198	cellulose synthase A catalytic subunit 8 [UDP-forming]	7470198	POPTR_004G059600v3	26.12
LOC7464516	auxin-responsive protein SAUR32	7464516	POPTR_015G006800v3	26.06
LOC7489313	NDR1/HIN1-like protein 1	7489313	POPTR_009G019600v3	25.97
LOC112328980	uncharacterized LOC112328980	112328980	POPTR_001G232200v3	25.92
LOC7476331	O-fucosyltransferase 8	7476331	POPTR_004G058900v3	25.87
LOC7457176	sugar transport protein 10	7457176	POPTR_007G073800v3	25.85
LOC7466778	filament-like plant protein 3	7466778	POPTR_007G098500v3	25.71
LOC7464786	uncharacterized LOC7464786	7464786		25.66
LOC18095010	uncharacterized LOC18095010	18095010	POPTR_001G231600v3	25.63
LOC7453595	CRIB domain-containing protein RIC4	7453595	POPTR_019G053300v3	25.61
LOC18096240	uncharacterized LOC18096240	18096240		25.58
LOC7496398	fasciclin-like arabinogalactan protein 12	7496398		25.56
LOC7466250	probable serine/threonine-protein kinase WNK5	7466250		25.55
LOC18097720	uncharacterized LOC18097720	18097720	POPTR_004G126800v3	25.51
LOC18104206	LOB domain-containing protein 15	18104206	POPTR_013G081200v3	25.49
LOC7478054	remorin	7478054	POPTR_001G107000v3	25.48
LOC7470910	uncharacterized LOC7470910	7470910	POPTR_011G130400v3	25.44
LOC7487537	uncharacterized LOC7487537	7487537	POPTR_001G366500v3	25.41
LOC7456301	sugar transport protein 10	7456301	POPTR_007G073700v3	25.40
LOC18094154	RING-H2 finger protein ATL29	18094154	POPTR_001G140900v3	25.38
LOC7474829	uncharacterized LOC7474829	7474829	POPTR_015G036800v3	25.36

Upper 100 Genes

Symbol	Function^*	Entrez Gene ID^*	Other ID	PC
LOC7483980	18 kDa seed maturation protein	7483980	POPTR_016G046400v3	49.54
LOC18105360	ATP synthase subunit a	18105360	POPTR_014G168000v3	49.23
LOC18106132	11 kDa late embryogenesis abundant protein	18106132	POPTR_T111300v3	48.70
LOC112323708	small nucleolar RNA U3	112323708		47.83
LOC112327602	uncharacterized LOC112327602	112327602		47.60
LOC18104089	U1 spliceosomal RNA	18104089		47.33
LOC112323706	small nucleolar RNA U3	112323706		46.13
LOC112327719	U1 spliceosomal RNA	112327719		45.67
LOC112326599	uncharacterized LOC112326599	112326599		45.38
LOC7484381	low-temperature-induced 65 kDa protein	7484381	POPTR_012G141300v3	43.85
rps7	ribosomal protein S7	4929762	Poptr_cp093	43.54
psbE	photosystem II protein V	4929687	Poptr_cp040	43.47
LOC112323707	small nucleolar RNA U3	112323707		43.34
rps7	ribosomal protein S7	4929722	Poptr_cp070	43.31
LOC112329032	U1 spliceosomal RNA	112329032		43.30
psbJ	photosystem II protein J	4929684	Poptr_cp037	43.26
LOC112327851	uncharacterized LOC112327851	112327851		43.09
LOC112323709	small nucleolar RNA U3	112323709		43.06
petN	cytochrome b6/f complex subunit VIII	4929647	Poptr_cp013	42.75
clpP	ATP-dependent Clp protease proteolytic subunit	4929698	Poptr_cp048	42.73
psbA	photosystem II protein D1	4929629	Poptr_cp001	42.65
LOC112327722	U1 spliceosomal RNA	112327722		42.48
LOC18096120	CRIB domain-containing protein RIC6	18096120	POPTR_002G035500v3	42.14
Poptr_cpR019	tRNA-Val	4929673	Poptr_cpR019	41.41
ndhB	NADH dehydrogenase subunit 2	4929721	Poptr_cp069	41.21
psbF	photosystem II protein VI	4929686	Poptr_cp039	41.19
ndhB	NADH dehydrogenase subunit 2	4929763	Poptr_cp094	41.14
LOC112325900	U1 spliceosomal RNA	112325900		41.06
LOC112327826	uncharacterized LOC112327826	112327826		40.89
rps12	ribosomal protein S12	4929696	Poptr_cp091	40.64
rps12	ribosomal protein S12	4929628	Poptr_cp071	40.63
LOC112327718	U1 spliceosomal RNA	112327718		40.54
trnK	tRNA-Lys	4929630	Poptr_cpR002	40.49
psbK	photosystem II protein K	4929633	Poptr_cp003	40.32
Poptr_cp018	hypothetical protein	4929657	Poptr_cp018	40.30
LOC112325895	U1 spliceosomal RNA	112325895		40.21
LOC112325374	U1 spliceosomal RNA	112325374		40.11
LOC112328703	U1 spliceosomal RNA	112328703		39.99
cemA	envelope membrane protein	4929682	Poptr_cp035	39.81
LOC112324390	U1 spliceosomal RNA	112324390		39.60
rpl33	ribosomal protein L33	4929693	Poptr_cp044	39.54
atpE	ATP synthase CF1 epsilon subunit	4929675	Poptr_cp028	39.54
LOC112326534	uncharacterized LOC112326534	112326534		39.22
LOC112323922	U1 spliceosomal RNA	112323922		39.18
atpB	ATP synthase CF1 beta subunit	4929676	Poptr_cp029	38.38
LOC112323789	ribulose bisphosphate carboxylase large chain	112323789		38.33
psbL	photosystem II protein L	4929685	Poptr_cp038	38.15
LOC7496123	zeatin O-glucosyltransferase	7496123	POPTR_006G048200v3	38.01
ndhK	NADH dehydrogenase subunit K	4929671	Poptr_cp026	37.92
ndhE	NADH dehydrogenase subunit 4L	4929742	Poptr_cp081	37.88
rps18	ribosomal protein S18	4929694	Poptr_cp045	37.87
psaJ	photosystem I subunit IX	4929692	Poptr_cp043	37.84
LOC7468341	beta-carotene hydroxylase 2, chloroplastic	7468341	POPTR_004G074000v3	37.75
Poptr_cpR012	tRNA-Ser	4929656	Poptr_cpR012	37.68
LOC112328712	U1 spliceosomal RNA	112328712		37.59
ycf4	photosystem I assembly protein Ycf4	4929681	Poptr_cp034	37.46
LOC7463139	probable WRKY transcription factor 43	7463139	POPTR_015G099200v3	37.44
rbcL	ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit	4929677	Poptr_cp030	37.36
rpoC2	RNA polymerase beta'' subunit	4929643	Poptr_cp010	37.26
LOC7493197	chalcone synthase 1	7493197	POPTR_003G176700v3	37.19
rpoC1	RNA polymerase beta' subunit	4929644	Poptr_cp011	37.14
ndhG	NADH dehydrogenase subunit 6	4929743	Poptr_cp082	37.09
psaA	photosystem I P700 chlorophyll a apoprotein A1	4929663	Poptr_cp022	36.99
ycf2	Ycf2	4929717	Poptr_cp066	36.96
petA	cytochrome f	4929683	Poptr_cp036	36.93
LOC112329051	small nucleolar RNA snoR143	112329051		36.88
psaB	photosystem I P700 chlorophyll a apoprotein A2	4929662	Poptr_cp021	36.74
LOC112323790	uncharacterized LOC112323790	112323790		36.63
ycf2	Ycf2	4929768	Poptr_cp098	36.60
LOC7471498	glucose and ribitol dehydrogenase	7471498	POPTR_008G149200v3	36.56
rps19	ribosomal protein S19	4929713	Poptr_cp063	36.49
LOC112323927	small nucleolar RNA snoR86	112323927		36.42
ycf3	photosystem I assembly protein Ycf3	4929664	Poptr_cp023	36.40
accD	acetyl-CoA carboxylase beta subunit	4929679	Poptr_cp032	36.32
psaC	photosystem I subunit VII	4929741	Poptr_cp080	36.23
LOC112323822	uncharacterized LOC112323822	112323822	POPTR_013G142000v3	35.89
rps19	ribosomal protein S19	4929772	Poptr_cp101	35.87
psaI	photosystem I subunit VIII	4929680	Poptr_cp033	35.67
ccsA	CcsA	4929739	Poptr_cp078	35.60
LOC112323823	DNA-directed RNA polymerase subunit beta-like	112323823		35.59
rpl2	ribosomal protein L2	4929714	Poptr_cp064	35.57
rpl2	ribosomal protein L2	4929771	Poptr_cp100	35.47
ndhI	NADH dehydrogenase subunit I	4929744	Poptr_cp083	35.46
ndhH	NADH dehydrogenase subunit 7	4929746	Poptr_cp085	35.31
rpl20	ribosomal protein L20	4929695	Poptr_cp046	35.25
petD	cytochrome b6/f complex subunit IV	4929704	Poptr_cp054	35.14
ndhC	NADH dehydrogenase subunit 3	4929672	Poptr_cp027	35.07
rpoA	RNA polymerase alpha subunit	4929705	Poptr_cp055	35.06
Poptr_cpR017	tRNA-Leu	4929668	Poptr_cpR017	34.97
rps4	ribosomal protein S4	4929666	Poptr_cp024	34.92
LOC7454691	malate synthase, glyoxysomal	7454691	POPTR_015G092000v3	34.76
rps14	ribosomal protein S14	4929661	Poptr_cp020	34.65
Poptr_cpR005	tRNA-Gly	4929636	Poptr_cpR005	34.59
ndhJ	NADH dehydrogenase subunit J	4929670	Poptr_cp025	34.47
rps3	ribosomal protein S3	4929711	Poptr_cp061	34.29
rpl16	ribosomal protein L16	4929710	Poptr_cp060	34.25
psbH	photosystem II protein H	4929702	Poptr_cp052	34.16
LOC112323884	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic	112323884	POPTR_013G074800v3	33.92
rpoB	RNA polymerase beta subunit	4929645	Poptr_cp012	33.69
atpI	ATP synthase CF0 A subunit	4929641	Poptr_cp008	33.69

Upper 100 Genes

Symbol	Function^*	Entrez Gene ID^*	Other ID	PC
atpE	ATP synthase CF1 epsilon subunit	4929675	Poptr_cp028	47.11
LOC18109877	probable RNA-dependent RNA polymerase 1	18109877	POPTR_010G105200v3	44.10
atpB	ATP synthase CF1 beta subunit	4929676	Poptr_cp029	42.83
ndhB	NADH dehydrogenase subunit 2	4929721	Poptr_cp069	42.32
ndhH	NADH dehydrogenase subunit 7	4929746	Poptr_cp085	41.70
LOC112323789	ribulose bisphosphate carboxylase large chain	112323789		40.59
ndhB	NADH dehydrogenase subunit 2	4929763	Poptr_cp094	40.47
psbJ	photosystem II protein J	4929684	Poptr_cp037	40.41
clpP	ATP-dependent Clp protease proteolytic subunit	4929698	Poptr_cp048	40.40
rps12	ribosomal protein S12	4929696	Poptr_cp091	40.28
trnA	tRNA-Ala	4929755	Poptr_cpR040	40.28
psbE	photosystem II protein V	4929687	Poptr_cp040	40.25
rps7	ribosomal protein S7	4929762	Poptr_cp093	40.18
rps7	ribosomal protein S7	4929722	Poptr_cp070	40.10
psbL	photosystem II protein L	4929685	Poptr_cp038	39.73
LOC7463760	flavonoid 3'-monooxygenase	7463760	POPTR_018G051300v3	39.60
rpoA	RNA polymerase alpha subunit	4929705	Poptr_cp055	39.51
rbcL	ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit	4929677	Poptr_cp030	39.23
trnA	tRNA-Ala	4929729	Poptr_cpR028	39.15
LOC112323790	uncharacterized LOC112323790	112323790		38.85
rps12	ribosomal protein S12	4929628	Poptr_cp071	38.68
Poptr_cp018	hypothetical protein	4929657	Poptr_cp018	38.67
psaB	photosystem I P700 chlorophyll a apoprotein A2	4929662	Poptr_cp021	38.59
Poptr_cpR027	tRNA-Ile	4929727	Poptr_cpR027	38.52
ndhK	NADH dehydrogenase subunit K	4929671	Poptr_cp026	38.44
ycf4	photosystem I assembly protein Ycf4	4929681	Poptr_cp034	38.39
psbF	photosystem II protein VI	4929686	Poptr_cp039	38.36
LOC7460537	cytochrome P450 78A5	7460537	POPTR_001G054800v3	38.22
Poptr_cpR012	tRNA-Ser	4929656	Poptr_cpR012	38.03
Poptr_cpR041	tRNA-Ile	4929756	Poptr_cpR041	37.64
rps2	ribosomal protein S2	4929642	Poptr_cp009	37.63
ycf3	photosystem I assembly protein Ycf3	4929664	Poptr_cp023	37.29
ndhA	NADH dehydrogenase subunit 1	4929745	Poptr_cp084	37.17
ndhI	NADH dehydrogenase subunit I	4929744	Poptr_cp083	37.15
rpl2	ribosomal protein L2	4929714	Poptr_cp064	37.07
LOC7476706	uncharacterized LOC7476706	7476706	POPTR_003G138700v3	37.04
trnK	tRNA-Lys	4929630	Poptr_cpR002	36.78
cemA	envelope membrane protein	4929682	Poptr_cp035	36.70
rpl33	ribosomal protein L33	4929693	Poptr_cp044	36.67
atpI	ATP synthase CF0 A subunit	4929641	Poptr_cp008	36.67
ndhJ	NADH dehydrogenase subunit J	4929670	Poptr_cp025	36.09
petN	cytochrome b6/f complex subunit VIII	4929647	Poptr_cp013	36.05
psbA	photosystem II protein D1	4929629	Poptr_cp001	36.01
rps18	ribosomal protein S18	4929694	Poptr_cp045	35.98
LOC7486494	probable LRR receptor-like serine/threonine-protein kinase At1g53440	7486494	POPTR_016G092700v3	35.97
LOC18100331	flavonoid 3'-monooxygenase	18100331	POPTR_006G141400v3	35.94
LOC7478346	flavonoid 3'-monooxygenase	7478346	POPTR_003G066600v3	35.73
LOC112323418	uncharacterized LOC112323418	112323418		35.60
petA	cytochrome f	4929683	Poptr_cp036	35.50
Poptr_cpR019	tRNA-Val	4929673	Poptr_cpR019	35.35
rpoC2	RNA polymerase beta'' subunit	4929643	Poptr_cp010	35.15
petD	cytochrome b6/f complex subunit IV	4929704	Poptr_cp054	34.92
ndhG	NADH dehydrogenase subunit 6	4929743	Poptr_cp082	34.85
rpoC1	RNA polymerase beta' subunit	4929644	Poptr_cp011	34.69
ndhE	NADH dehydrogenase subunit 4L	4929742	Poptr_cp081	34.55
psbD	photosystem II protein D2	4929654	Poptr_cp016	34.36
LOC7471660	flavonoid 3'-monooxygenase	7471660	POPTR_003G066800v3	34.34
psaI	photosystem I subunit VIII	4929680	Poptr_cp033	34.28
psaC	photosystem I subunit VII	4929741	Poptr_cp080	34.13
LOC112323823	DNA-directed RNA polymerase subunit beta-like	112323823		33.98
rpl20	ribosomal protein L20	4929695	Poptr_cp046	33.87
LOC7473878	protein DMP10	7473878	POPTR_013G027200v3	33.84
psaA	photosystem I P700 chlorophyll a apoprotein A1	4929663	Poptr_cp022	33.79
rps11	ribosomal protein S11	4929706	Poptr_cp056	33.74
rps4	ribosomal protein S4	4929666	Poptr_cp024	33.70
rpl16	ribosomal protein L16	4929710	Poptr_cp060	33.62
ndhD	NADH dehydrogenase subunit 4	4929740	Poptr_cp079	33.51
LOC7479080	kirola	7479080	POPTR_004G020100v3	33.47
ndhC	NADH dehydrogenase subunit 3	4929672	Poptr_cp027	33.44
ycf2	Ycf2	4929717	Poptr_cp066	33.22
LOC112323782	uncharacterized LOC112323782	112323782		33.18
rpl2	ribosomal protein L2	4929771	Poptr_cp100	33.15
rps3	ribosomal protein S3	4929711	Poptr_cp061	32.97
psaJ	photosystem I subunit IX	4929692	Poptr_cp043	32.64
rps19	ribosomal protein S19	4929713	Poptr_cp063	32.62
rpoB	RNA polymerase beta subunit	4929645	Poptr_cp012	32.56
accD	acetyl-CoA carboxylase beta subunit	4929679	Poptr_cp032	32.55
LOC7467972	thaumatin-like protein 1	7467972	POPTR_001G220900v3	32.37
LOC7473251	thioredoxin H-type 2	7473251	POPTR_008G194100v3	32.34
LOC7478347	cytochrome P450 71A1	7478347	POPTR_003G066400v3	32.21
LOC7484402	probable (S)-N-methylcoclaurine 3'-hydroxylase isozyme 2	7484402	POPTR_012G136600v3	32.12
LOC112323884	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic	112323884	POPTR_013G074800v3	32.07
LOC112326158	O-acyltransferase WSD1-like	112326158	POPTR_T170200v3	32.05
LOC18108208	uncharacterized LOC18108208	18108208	POPTR_019G027000v3	31.96
LOC7461263	MLP-like protein 28	7461263	POPTR_017G051100v3	31.94
LOC7467040	cytochrome P450 78A9	7467040	POPTR_001G083900v3	31.89
LOC7455247	O-acyltransferase WSD1	7455247	POPTR_019G071000v3	31.89
LOC7479535	myb family transcription factor PHL5	7479535	POPTR_006G191000v3	31.78
LOC7465614	benzyl alcohol O-benzoyltransferase	7465614	POPTR_013G074500v3	31.75
rps14	ribosomal protein S14	4929661	Poptr_cp020	31.72
LOC7491320	monothiol glutaredoxin-S9	7491320	POPTR_014G134300v3	31.63
psbC	photosystem II 44 kDa protein	4929655	Poptr_cp017	31.57
LOC7458209	aluminum-activated malate transporter 9	7458209	POPTR_003G134100v3	31.48
LOC18105360	ATP synthase subunit a	18105360	POPTR_014G168000v3	31.41
Poptr_cpR017	tRNA-Leu	4929668	Poptr_cpR017	31.31
rps19	ribosomal protein S19	4929772	Poptr_cp101	31.22
Poptr_cp087	Ycf1	4929748	Poptr_cp087	31.09
Poptr_cpR005	tRNA-Gly	4929636	Poptr_cpR005	31.02
LOC18109378	heavy metal-associated isoprenylated plant protein 30	18109378	POPTR_011G149500v3	30.63
LOC18102584	uncharacterized LOC18102584	18102584		30.46

Upper 100 Genes

Symbol	Function^*	Entrez Gene ID^*	Other ID	PC
LOC7488343	lysine histidine transporter-like 6	7488343	POPTR_008G118000v3	41.00
LOC18105022	cytochrome P450 734A1	18105022	POPTR_014G043000v3	39.04
LOC7487693	AT-hook motif nuclear-localized protein 19	7487693	POPTR_013G044500v3	38.26
LOC7491394	benzyl alcohol O-benzoyltransferase	7491394	POPTR_001G447500v3	35.40
LOC7463180	nitrate reductase [NADH]	7463180	POPTR_002G088600v3	33.06
LOC7486630	probable 2-oxoglutarate-dependent dioxygenase AOP1	7486630	POPTR_001G176100v3	32.47
LOC7482262	putative beta-D-xylosidase	7482262	POPTR_010G141400v3	31.93
LOC7489277	aquaporin TIP1-3	7489277	POPTR_009G027200v3	31.47
LOC18095988	benzyl alcohol O-benzoyltransferase	18095988	POPTR_001G447400v3	30.89
LOC7474971	lysine histidine transporter-like 8	7474971	POPTR_009G140800v3	30.88
LOC7487272	tropinone reductase homolog	7487272	POPTR_006G089800v3	30.70
LOC7486629	probable 2-oxoglutarate-dependent dioxygenase AOP1	7486629	POPTR_001G176000v3	29.34
LOC18097400	beta-glucosidase 46	18097400	POPTR_004G019300v3	28.82
LOC18098406	hexose carrier protein HEX6	18098406	POPTR_004G233500v3	28.75
LOC7465813	AT-hook motif nuclear-localized protein 24	7465813	POPTR_003G116900v3	28.59
LOC18104536	trans-resveratrol di-O-methyltransferase	18104536	POPTR_013G120800v3	28.40
LOC18105965	uncharacterized LOC18105965	18105965	POPTR_015G119800v3	28.27
LOC18105079	uclacyanin-3	18105079	POPTR_014G049600v3	28.25
LOC18095430	probable LRR receptor-like serine/threonine-protein kinase At1g53430	18095430	POPTR_001G385400v3	27.45
LOC7457170	probable terpene synthase 6	7457170	POPTR_007G074400v3	27.37
LOC18099625	abscisic stress-ripening protein 3	18099625	POPTR_005G193600v3	27.14
LOC112324789	berberine bridge enzyme-like 8	112324789	POPTR_001G462400v3	26.93
LOC7492425	AT-hook motif nuclear-localized protein 20	7492425	POPTR_010G074200v3	26.85
LOC18110359	GDSL esterase/lipase At1g29670	18110359	POPTR_018G089200v3	26.53
LOC7470729	oleosin 16 kDa	7470729	POPTR_006G234900v3	26.47
LOC7473446	auxin-responsive protein IAA14	7473446	POPTR_008G161200v3	26.30
LOC7484879	(-)-isopiperitenol/(-)-carveol dehydrogenase, mitochondrial	7484879	POPTR_012G105700v3	25.99
LOC7492393	galactinol synthase 1	7492393	POPTR_010G042000v3	25.97
LOC7475953	flowering-promoting factor 1-like protein 3	7475953	POPTR_010G024500v3	25.97
LOC7497422	laccase-3	7497422	POPTR_013G152700v3	25.97
LOC7495294	alpha-farnesene synthase	7495294	POPTR_011G031800v3	25.97
LOC7482889	MLP-like protein 43	7482889	POPTR_008G131100v3	25.75
LOC18109540	alcohol dehydrogenase	18109540	POPTR_005G060200v3	25.66
LOC7468487	probable pectinesterase/pectinesterase inhibitor 35	7468487	POPTR_014G149700v3	25.60
LOC7485665	AT-hook motif nuclear-localized protein 25	7485665	POPTR_005G257200v3	25.05
LOC7489432	GDSL esterase/lipase At1g29670	7489432	POPTR_018G089400v3	25.00
LOC7496783	asparagine synthetase [glutamine-hydrolyzing] 1	7496783	POPTR_001G278400v3	24.80
LOC18108496	probable O-methyltransferase 3	18108496	POPTR_019G093000v3	24.78
LOC7461571	GDSL esterase/lipase At1g29660	7461571	POPTR_018G088600v3	24.71
LOC112324786	berberine bridge enzyme-like 8	112324786	POPTR_001G462200v3	24.47
LOC7469672	transcription factor bHLH18	7469672	POPTR_009G081400v3	24.43
LOC7478600	wall-associated receptor kinase 2	7478600	POPTR_009G154100v3	24.35
LOC7462495	phosphomethylethanolamine N-methyltransferase	7462495	POPTR_015G039000v3	24.05
LOC7465228	galactinol synthase 2	7465228	POPTR_013G005900v3	23.98
LOC7457941	ABC transporter C family member 14	7457941	POPTR_014G130500v3	23.44
LOC18105808	probable WRKY transcription factor 72	18105808	POPTR_015G064100v3	23.26
LOC7457789	probable galactinol--sucrose galactosyltransferase 2	7457789	POPTR_015G086400v3	23.16
LOC7456253	omega-hydroxypalmitate O-feruloyl transferase	7456253	POPTR_001G326300v3	22.83
LOC7458573	cysteine-rich receptor-like protein kinase 10	7458573	POPTR_004G024100v3	22.81
LOC7473898	cationic amino acid transporter 1	7473898	POPTR_013G030900v3	22.77
LOC7491869	ABC transporter B family member 2	7491869	POPTR_003G094400v3	22.76
LOC18099678	jacalin-related lectin 3	18099678	POPTR_005G232400v3	22.66
LOC7459521	glycine-rich protein 5	7459521	POPTR_002G252400v3	22.56
LOC18110643	probable LRR receptor-like serine/threonine-protein kinase At1g53440	18110643	POPTR_016G011200v3	22.54
LOC18094155	transcription factor bHLH71	18094155	POPTR_001G141100v3	22.54
LOC112329051	small nucleolar RNA snoR143	112329051		22.52
LOC7478659	protein NLP1	7478659	POPTR_001G293300v3	22.52
LOC7463780	uncharacterized LOC7463780	7463780	POPTR_018G046500v3	22.50
LOC7483951	tetraketide alpha-pyrone reductase 2	7483951	POPTR_008G120200v3	22.48
LOC18097308	miraculin	18097308	POPTR_004G000400v3	22.47
LOC7493262	putative UPF0481 protein At3g02645	7493262	POPTR_003G206500v3	22.43
LOC7474394	fatty alcohol:caffeoyl-CoA acyltransferase	7474394	POPTR_010G180000v3	22.03
LOC7489112	cannabidiolic acid synthase-like 1	7489112	POPTR_011G158100v3	21.98
LOC7465539	protein DETOXIFICATION 27	7465539	POPTR_007G010200v3	21.86
LOC7454973	laccase-7	7454973	POPTR_006G094100v3	21.84
LOC7482890	MLP-like protein 328	7482890	POPTR_008G131200v3	21.77
LOC7490956	metallothiol transferase FosB	7490956	POPTR_001G171600v3	21.76
LOC7487465	lactosylceramide 4-alpha-galactosyltransferase	7487465	POPTR_016G114200v3	21.71
LOC18096030	berberine bridge enzyme-like 8	18096030	POPTR_001G462300v3	21.67
LOC7460508	pleiotropic drug resistance protein 1	7460508	POPTR_001G048900v3	21.55
LOC18102541	U-box domain-containing protein 21	18102541	POPTR_010G103100v3	21.49
LOC7474049	uncharacterized LOC7474049	7474049	POPTR_015G144800v3	21.42
LOC7494429	beta-amyrin 28-oxidase	7494429	POPTR_013G106200v3	21.38
LOC7491938	uncharacterized LOC7491938	7491938		21.26
LOC7480605	allene oxide synthase 3	7480605	POPTR_004G149000v3	21.11
LOC18103511	berberine bridge enzyme-like 28	18103511	POPTR_011G162800v3	21.08
LOC18095476	pathogen-related protein	18095476	POPTR_001G389800v3	21.05
LOC7494330	major pollen allergen Bet v 1-D/H	7494330	POPTR_004G033000v3	20.99
LOC18099862	3,9-dihydroxypterocarpan 6A-monooxygenase	18099862	POPTR_006G057900v3	20.97
LOC7457786	cytochrome P450 71A1	7457786	POPTR_015G086000v3	20.96
LOC18110360	GDSL esterase/lipase At5g45670	18110360	POPTR_018G089300v3	20.80
LOC7485051	alpha-amylase/subtilisin inhibitor	7485051	POPTR_007G111600v3	20.74
LOC7481640	CASP-like protein 1D1	7481640	POPTR_008G205000v3	20.71
LOC18100146	transcription factor RAX2	18100146	POPTR_006G123400v3	20.68
LOC7461568	GDSL esterase/lipase At1g29670	7461568	POPTR_018G088500v3	20.62
LOC7460537	cytochrome P450 78A5	7460537	POPTR_001G054800v3	20.43
LOC7478098	AT-hook motif nuclear-localized protein 26	7478098	POPTR_001G115200v3	20.39
LOC7462863	C2 domain-containing protein At1g63220	7462863	POPTR_002G123200v3	20.34
LOC18107663	inositol oxygenase 2	18107663	POPTR_018G069700v3	20.33
LOC7462444	crocetin glucosyltransferase, chloroplastic	7462444	POPTR_002G236400v3	20.25
LOC7456243	truncated transcription factor CAULIFLOWER A	7456243	POPTR_001G328400v3	20.21
LOC7461370	phytoene synthase 2, chloroplastic	7461370	POPTR_003G218000v3	20.15
LOC7467241	branched-chain-amino-acid aminotransferase 2, chloroplastic	7467241	POPTR_002G113600v3	20.09
LOC112328218	extensin-2-like	112328218	POPTR_001G020000v3	19.96
LOC7489115	berberine bridge enzyme-like 21	7489115	POPTR_011G158500v3	19.94
LOC7469204	pathogen-related protein	7469204	POPTR_005G188400v3	19.90
LOC7495233	COBRA-like protein 7	7495233	POPTR_014G125300v3	19.88
LOC7467535	AT-hook motif nuclear-localized protein 20	7467535	POPTR_008G164500v3	19.86
LOC7494515	protein DJ-1 homolog D	7494515	POPTR_004G076000v3	19.86
LOC18095390	transcription factor TCP4	18095390	POPTR_001G375800v3	19.82

Upper 100 Genes

Symbol	Function^*	Entrez Gene ID^*	Other ID	PC
LOC7467387	18.1 kDa class I heat shock protein	7467387	POPTR_009G049900v3	29.85
LOC18097975	18.1 kDa class I heat shock protein	18097975		29.64
LOC7478626	18.1 kDa class I heat shock protein	7478626	POPTR_009G148000v3	28.25
LOC7479202	23.6 kDa heat shock protein, mitochondrial	7479202	POPTR_003G109200v3	27.46
LOC18106465	heat shock protein 83	18106465	POPTR_017G146600v3	25.39
LOC18094241	heat shock 70 kDa protein	18094241	POPTR_001G042600v3	25.18
LOC7489736	mitogen-activated protein kinase kinase kinase 17	7489736	POPTR_005G139300v3	25.08
LOC7473268	luminal-binding protein 4	7473268	POPTR_013G018000v3	24.36
LOC112323309	probable glutathione S-transferase parC	112323309	POPTR_011G113400v3	24.29
LOC7476266	multiprotein-bridging factor 1c	7476266	POPTR_018G075200v3	23.18
LOC7481611	18.1 kDa class I heat shock protein	7481611	POPTR_010G175200v3	23.02
LOC7471654	phospholipase A1-Ibeta2, chloroplastic	7471654	POPTR_003G081500v3	22.43
LOC7465011	monooxygenase 2	7465011	POPTR_001G307500v3	22.38
LOC112323310	probable glutathione S-transferase parC	112323310	POPTR_011G114000v3	22.31
LOC7482152	ethylene-responsive transcription factor ERF025	7482152	POPTR_012G134000v3	22.30
LOC7488987	probable xyloglucan endotransglucosylase/hydrolase protein 23	7488987	POPTR_018G095100v3	22.29
LOC7482117	dehydration-responsive element-binding protein 1A	7482117	POPTR_012G134100v3	22.25
LOC7483109	mitogen-activated protein kinase kinase kinase 18	7483109	POPTR_007G044800v3	21.75
LOC7461592	probable xyloglucan endotransglucosylase/hydrolase protein 23	7461592	POPTR_018G095200v3	21.67
LOC7458152	probable mediator of RNA polymerase II transcription subunit 37c	7458152	POPTR_010G206600v3	21.49
LOC18109033	18.1 kDa class I heat shock protein	18109033		21.38
LOC7496429	small heat shock protein, chloroplastic	7496429	POPTR_012G022400v3	21.16
LOC18109968	probable glutathione S-transferase parC	18109968	POPTR_013G137200v3	21.09
LOC7460940	protein FAM32A-like	7460940	POPTR_005G174400v3	20.75
LOC18095192	scopoletin glucosyltransferase	18095192	POPTR_001G303000v3	20.68
LOC18110133	17.5 kDa class I heat shock protein	18110133	POPTR_009G039200v3	20.34
LOC7497047	protein TIFY 5A	7497047	POPTR_011G083900v3	20.29
LOC18100610	E3 ubiquitin-protein ligase PUB22	18100610	POPTR_006G202600v3	20.19
LOC7482481	probable calcium-binding protein CML45	7482481	POPTR_017G084800v3	19.96
LOC18097977	18.1 kDa class I heat shock protein	18097977	POPTR_004G187200v3	19.93
LOC7494528	heat shock protein 83	7494528	POPTR_004G073600v3	19.56
LOC7474533	calcium-binding protein CML37	7474533	POPTR_002G001400v3	19.20
LOC18104942	transcription factor MYB77	18104942	POPTR_014G035100v3	19.07
LOC7476686	ethylene-responsive transcription factor ERF017	7476686	POPTR_018G047300v3	18.80
LOC7464633	xyloglucan endotransglucosylase/hydrolase 2	7464633	POPTR_005G201200v3	18.64
LOC7490035	ethylene-responsive transcription factor ERF109	7490035	POPTR_009G101900v3	18.51
LOC7492280	ethylene-responsive transcription factor ERF017	7492280	POPTR_006G218200v3	18.40
LOC18102191	18.1 kDa class I heat shock protein	18102191	POPTR_009G147900v3	18.07
LOC112325022	cytochrome P450 CYP73A100-like	112325022	POPTR_018G146100v3	17.95
LOC18094242	heat shock 70 kDa protein	18094242	POPTR_001G042700v3	17.91
LOC7460976	probable receptor-like protein kinase At1g11050	7460976	POPTR_005G181800v3	17.82
LOC7494393	22.0 kDa class IV heat shock protein	7494393	POPTR_013G089200v3	17.81
LOC7467388	17.3 kDa class I heat shock protein	7467388	POPTR_009G049800v3	17.72
LOC18105079	uclacyanin-3	18105079	POPTR_014G049600v3	17.71
LOC18097788	ethylene-responsive transcription factor ERF109	18097788	POPTR_004G141200v3	17.48
LOC7484748	ABC transporter A family member 2	7484748	POPTR_012G069800v3	17.06
LOC18098378	TMV resistance protein N	18098378	POPTR_004G230000v3	16.99
LOC18098202	ubiquitin-like protein 5	18098202	POPTR_004G211600v3	16.90
LOC18108603	protein TIC 20-IV, chloroplastic	18108603	POPTR_019G105200v3	16.78
LOC18100302	ethylene-responsive transcription factor ERF017	18100302	POPTR_006G138700v3	16.77
LOC7465130	zinc finger protein ZAT12	7465130	POPTR_001G235800v3	16.76
LOC18109144	xyloglucan endotransglucosylase/hydrolase protein 15	18109144	POPTR_T180200v3	16.76
LOC18095065	18.2 kDa class I heat shock protein	18095065	POPTR_001G254700v3	16.67
LOC7471619	small heat shock protein, chloroplastic	7471619	POPTR_003G076000v3	16.58
LOC18109505	uncharacterized LOC18109505	18109505		16.55
LOC7467676	class I heat shock protein	7467676	POPTR_T125900v3	16.49
LOC7489735	mitogen-activated protein kinase kinase kinase 17	7489735	POPTR_005G139200v3	16.42
LOC7457547	scopoletin glucosyltransferase	7457547	POPTR_009G098400v3	16.28
LOC7463042	probable calcium-binding protein CML45	7463042	POPTR_004G122900v3	16.27
LOC18102104	scopoletin glucosyltransferase	18102104		16.17
LOC7478884	probable xyloglucan endotransglucosylase/hydrolase protein 23	7478884	POPTR_013G005700v3	16.14
LOC112326599	uncharacterized LOC112326599	112326599		16.13
LOC18105997	heat shock cognate protein 80	18105997	POPTR_016G003400v3	16.11
LOC112328902	CASP-like protein 4D1	112328902	POPTR_010G204700v3	16.10
LOC18102541	U-box domain-containing protein 21	18102541	POPTR_010G103100v3	16.01
LOC7473428	1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 1	7473428	POPTR_008G157400v3	15.97
LOC7492050	scopoletin glucosyltransferase	7492050	POPTR_001G303600v3	15.85
LOC7491951	exocyst complex component EXO70H1	7491951	POPTR_006G214300v3	15.71
LOC7469201	stearoyl-[acyl-carrier-protein] 9-desaturase 6, chloroplastic	7469201	POPTR_005G187600v3	15.68
LOC7488136	zinc finger protein ZAT12	7488136	POPTR_009G027700v3	15.58
LOC7480455	dirigent protein 11	7480455	POPTR_005G100700v3	15.58
LOC7458129	ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic	7458129	POPTR_010G200500v3	15.57
LOC7469820	heat shock cognate 70 kDa protein 2	7469820	POPTR_008G054000v3	15.56
LOC7473239	probable galacturonosyltransferase-like 9	7473239	POPTR_008G192600v3	15.53
LOC18105602	U-box domain-containing protein 21	18105602	POPTR_015G031000v3	15.53
LOC7485450	polyphenol oxidase, chloroplastic	7485450	POPTR_011G047300v3	15.52
LOC7458849	calcium-binding protein PBP1	7458849	POPTR_019G120600v3	15.52
LOC7455409	galactinol synthase 1	7455409	POPTR_014G116800v3	15.52
LOC112325220	protein TIC 20-IV, chloroplastic-like	112325220	POPTR_019G108800v3	15.50
LOC18108483	laccase-14	18108483	POPTR_019G088600v3	15.50
LOC7488405	10 kDa chaperonin, mitochondrial	7488405	POPTR_008G130500v3	15.47
LOC7489277	aquaporin TIP1-3	7489277	POPTR_009G027200v3	15.39
LOC18103249	calcyclin-binding protein	18103249	POPTR_011G085100v3	15.38
LOC7497418	calcium-binding protein PBP1	7497418	POPTR_013G151000v3	15.38
LOC18105148	uncharacterized LOC18105148	18105148		15.34
LOC7476868	calcium-transporting ATPase 12, plasma membrane-type	7476868	POPTR_005G215600v3	15.32
LOC7460261	cytosolic sulfotransferase 15	7460261	POPTR_003G193500v3	15.32
LOC7468486	peptidyl-prolyl cis-trans isomerase FKBP62	7468486	POPTR_014G149400v3	15.25
LOC7462237	17.9 kDa class II heat shock protein	7462237	POPTR_006G223900v3	15.24
LOC7460408	probable WRKY transcription factor 33	7460408	POPTR_016G128300v3	15.19
LOC18109174	dirigent protein 11	18109174	POPTR_T173200v3	15.17
LOC18094575	phospholipase A1-Ibeta2, chloroplastic	18094575	POPTR_001G153100v3	15.13
LOC7460943	ethylene-responsive transcription factor ERF014	7460943	POPTR_005G176000v3	15.12
LOC7492436	transcription factor bHLH92	7492436	POPTR_010G077000v3	15.10
LOC112326123	dnaJ protein ERDJ3B-like	112326123	POPTR_T165400v3	15.06
LOC7467451	laccase-14	7467451	POPTR_019G088700v3	15.06
LOC7465161	expansin-A8	7465161	POPTR_013G154700v3	15.04
LOC18107209	peroxidase 55	18107209	POPTR_017G064100v3	14.92
LOC18096973	uncharacterized LOC18096973	18096973	POPTR_003G092100v3	14.86
LOC7466408	U-box domain-containing protein 29	7466408	POPTR_002G070500v3	14.85

Upper 100 Genes

Symbol	Function^*	Entrez Gene ID^*	Other ID	PC
LOC7485458	crocetin glucosyltransferase, chloroplastic	7485458	POPTR_006G055600v3	28.82
LOC7468057	probable 2-oxoglutarate-dependent dioxygenase At5g05600	7468057	POPTR_006G101100v3	27.43
LOC18099771	protein PYRICULARIA ORYZAE RESISTANCE 21	18099771	POPTR_006G019800v3	27.42
LOC18100426	bark storage protein A	18100426	POPTR_T096300v3	26.39
LOC7479600	heavy metal-associated isoprenylated plant protein 2	7479600	POPTR_006G020000v3	25.26
LOC7474945	cytochrome P450 94C1	7474945	POPTR_009G145400v3	24.73
LOC7496542	protein TIFY 9	7496542	POPTR_003G165000v3	24.64
LOC18094704	protein TIFY 10A	18094704	POPTR_001G166200v3	24.59
LOC7488765	protein LURP-one-related 15	7488765	POPTR_016G130700v3	24.58
LOC18108499	endochitinase EP3	18108499	POPTR_019G093900v3	23.96
LOC18101882	major allergen Pru ar 1	18101882	POPTR_008G212300v3	23.37
LOC7453765	carbonic anhydrase 2	7453765	POPTR_015G076000v3	22.46
LOC7475024	uncharacterized LOC7475024	7475024	POPTR_009G070200v3	22.45
LOC7485533	tryptophan synthase beta chain 1	7485533	POPTR_011G024900v3	22.44
LOC7476916	transcription factor MYB14	7476916	POPTR_005G224100v3	22.19
LOC7469347	heavy metal-associated isoprenylated plant protein 47	7469347	POPTR_014G171300v3	22.03
LOC7464613	laccase-12	7464613	POPTR_010G183500v3	21.94
LOC7483928	leucoanthocyanidin reductase	7483928	POPTR_008G116500v3	21.39
LOC7487348	uncharacterized LOC7487348	7487348	POPTR_006G105600v3	21.28
LOC7491592	steroid 5-alpha-reductase DET2	7491592	POPTR_010G245200v3	21.09
LOC18100012	uncharacterized LOC18100012	18100012	POPTR_006G105500v3	21.03
LOC7474724	blue copper protein	7474724	POPTR_006G067300v3	20.96
LOC7455410	transcription factor MYB108	7455410	POPTR_014G117000v3	20.67
LOC7472498	probable calcium-binding protein CML43	7472498	POPTR_016G142000v3	20.66
LOC7497047	protein TIFY 5A	7497047	POPTR_011G083900v3	20.65
LOC18109326	acidic endochitinase WIN6.2B-like	18109326	POPTR_T175300v3	20.54
LOC112328250	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.8	112328250	POPTR_007G141400v3	20.34
LOC7485485	probable xyloglucan endotransglucosylase/hydrolase protein 23	7485485	POPTR_006G071200v3	20.33
LOC7486336	cytochrome P450 78A7	7486336	POPTR_005G084500v3	20.26
LOC18106165	glucan endo-1,3-beta-glucosidase, basic isoform	18106165	POPTR_016G057400v3	20.06
LOC18105371	heavy metal-associated isoprenylated plant protein 16	18105371	POPTR_014G171500v3	20.01
LOC7492242	NAC domain-containing protein 90	7492242	POPTR_006G209200v3	19.86
LOC7453729	UDP-glycosyltransferase 82A1	7453729	POPTR_016G019400v3	19.85
LOC7456842	uncharacterized LOC7456842	7456842	POPTR_004G095200v3	19.76
LOC7465099	abscisic acid 8'-hydroxylase 2	7465099	POPTR_001G242600v3	19.72
LOC7459061	MLP-like protein 423	7459061	POPTR_010G096000v3	19.67
LOC7486082	endogenous alpha-amylase/subtilisin inhibitor	7486082	POPTR_007G111800v3	19.63
LOC7474964	acidic endochitinase WIN6-like	7474964		19.59
LOC7480140	salicylate carboxymethyltransferase	7480140	POPTR_007G021300v3	19.50
LOC18099774	protein PYRICULARIA ORYZAE RESISTANCE 21	18099774	POPTR_006G020100v3	19.31
LOC7469630	zinc finger protein ZAT10	7469630	POPTR_009G089400v3	19.25
LOC7490918	dehydration-responsive element-binding protein 1E	7490918	POPTR_001G110700v3	19.05
LOC7472714	probable WRKY transcription factor 41	7472714	POPTR_001G092900v3	18.97
LOC7466874	lipase-like PAD4	7466874	POPTR_005G068700v3	18.94
LOC18097932	uncharacterized LOC18097932	18097932	POPTR_T020000v3	18.94
LOC7455199	linamarin synthase 2	7455199	POPTR_005G073800v3	18.94
LOC7486851	protein ZINC INDUCED FACILITATOR-LIKE 1	7486851	POPTR_008G010600v3	18.88
LOC18104880	uncharacterized LOC18104880	18104880	POPTR_014G027800v3	18.83
LOC7493198	chalcone synthase 1	7493198	POPTR_003G176800v3	18.79
LOC7472358	9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic	7472358	POPTR_011G112400v3	18.75
LOC7494801	very-long-chain 3-oxoacyl-CoA reductase-like protein At1g24470	7494801	POPTR_008G181600v3	18.74
LOC7458264	cytochrome b561 and DOMON domain-containing protein At5g35735	7458264	POPTR_002G222700v3	18.63
LOC7487673	pathogenesis-related protein PR-4	7487673	POPTR_013G041700v3	18.62
LOC18099243	AAA-ATPase At1g43910	18099243	POPTR_005G119200v3	18.56
LOC7478075	dehydration-responsive element-binding protein 1E	7478075	POPTR_001G110800v3	18.55
LOC18102943	(3S,6E)-nerolidol synthase 1	18102943	POPTR_011G032300v3	18.52
LOC18099144	probable aquaporin PIP2-8	18099144	POPTR_005G109200v3	18.52
LOC7463394	protein ECERIFERUM 1	7463394	POPTR_014G180300v3	18.50
LOC7454262	cytochrome P450 81E8	7454262	POPTR_008G205200v3	18.46
LOC7479547	class V chitinase	7479547	POPTR_006G188300v3	18.39
LOC7486795	homeobox-leucine zipper protein ATHB-7	7486795	POPTR_014G103000v3	18.25
LOC18100610	E3 ubiquitin-protein ligase PUB22	18100610	POPTR_006G202600v3	18.18
LOC7487324	probable 2-oxoglutarate-dependent dioxygenase At5g05600	7487324	POPTR_006G101200v3	18.01
LOC18109174	dirigent protein 11	18109174	POPTR_T173200v3	17.82
LOC7496928	probable isoaspartyl peptidase/L-asparaginase 2	7496928	POPTR_014G022900v3	17.80
LOC7492436	transcription factor bHLH92	7492436	POPTR_010G077000v3	17.77
LOC7475677	protein TIFY 10b	7475677	POPTR_003G068900v3	17.76
LOC7480438	uncharacterized protein At1g24485	7480438	POPTR_005G043700v3	17.76
LOC18104618	transcription factor bHLH162	18104618	POPTR_013G129800v3	17.74
LOC7496976	cytochrome P450 86A8	7496976	POPTR_014G085800v3	17.73
LOC7480455	dirigent protein 11	7480455	POPTR_005G100700v3	17.66
LOC18096340	cucumber peeling cupredoxin	18096340	POPTR_002G150600v3	17.66
LOC7467474	endochitinase PR4	7467474	POPTR_019G093800v3	17.62
LOC7475643	protein SAR DEFICIENT 1	7475643	POPTR_015G045300v3	17.60
LOC18094037	nudix hydrolase 2	18094037	POPTR_001G127700v3	17.60
LOC7460261	cytosolic sulfotransferase 15	7460261	POPTR_003G193500v3	17.58
LOC18094938	thaumatin-like protein 1	18094938	POPTR_001G221800v3	17.58
LOC7496089	putative methyltransferase DDB_G0268948	7496089	POPTR_006G042200v3	17.56
LOC18094937	thaumatin-like protein 1	18094937	POPTR_001G221900v3	17.53
LOC7475604	probable protein phosphatase 2C 51	7475604	POPTR_T137100v3	17.46
LOC7458849	calcium-binding protein PBP1	7458849	POPTR_019G120600v3	17.38
LOC7463786	protein IQ-DOMAIN 1	7463786	POPTR_011G096500v3	17.37
LOC7493197	chalcone synthase 1	7493197	POPTR_003G176700v3	17.29
LOC112325255	uncharacterized LOC112325255	112325255		17.26
LOC18104080	pathogenesis-related protein PR-4	18104080	POPTR_013G041900v3	17.25
LOC7477665	cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1	7477665	POPTR_005G237600v3	17.24
LOC7475030	flavonoid 3',5'-hydroxylase 1	7475030	POPTR_009G069100v3	17.14
LOC7453762	transcription factor bHLH162	7453762	POPTR_015G074500v3	17.14
LOC112324315	probable protein phosphatase 2C 51	112324315	POPTR_015G018800v3	17.08
LOC7455741	transmembrane protein 45B	7455741	POPTR_001G008900v3	17.07
LOC7460419	protein LURP-one-related 15	7460419	POPTR_016G131400v3	16.89
LOC7463591	transmembrane protein 45B	7463591	POPTR_003G216600v3	16.86
LOC18099769	protein PYRICULARIA ORYZAE RESISTANCE 21	18099769	POPTR_006G019500v3	16.84
LOC7453982	trehalose-phosphate phosphatase A	7453982	POPTR_012G126100v3	16.72
LOC7462100	laccase-12	7462100	POPTR_008G073700v3	16.69
LOC18098085	F-box protein At2g27310	18098085	POPTR_004G199300v3	16.68
LOC18104574	cytochrome P450 82G1	18104574	POPTR_013G125300v3	16.66
LOC18111206	probable WRKY transcription factor 31	18111206	POPTR_011G007800v3	16.54
LOC7485216	probable WRKY transcription factor 30	7485216	POPTR_012G031700v3	16.54
LOC7465052	probable indole-3-acetic acid-amido synthetase GH3.1	7465052	POPTR_001G298300v3	16.52

Upper 100 Genes

Symbol	Function^*	Entrez Gene ID^*	Other ID	PC
LOC7472135	chaperone protein dnaJ 11, chloroplastic	7472135	POPTR_009G131800v3	33.14
LOC7465161	expansin-A8	7465161	POPTR_013G154700v3	27.84
LOC18100191	uncharacterized LOC18100191	18100191	POPTR_006G127900v3	25.95
LOC7485277	WAT1-related protein At4g30420	7485277	POPTR_006G177700v3	24.48
LOC7477401	uncharacterized LOC7477401	7477401	POPTR_004G044300v3	23.23
LOC7484381	low-temperature-induced 65 kDa protein	7484381	POPTR_012G141300v3	22.10
LOC7460859	dynein light chain 2, cytoplasmic	7460859	POPTR_011G126400v3	21.87
LOC7493257	DNA damage-repair/toleration protein DRT100	7493257	POPTR_003G207000v3	21.80
LOC7458168	acid beta-fructofuranosidase 2, vacuolar	7458168	POPTR_003G126300v3	21.42
LOC18109673	myb family transcription factor PHL5	18109673	POPTR_016G048000v3	21.38
LOC7483567	dormancy-associated protein homolog 4	7483567	POPTR_003G070500v3	21.19
LOC18105645	G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080	18105645	POPTR_015G026300v3	21.13
LOC7465099	abscisic acid 8'-hydroxylase 2	7465099	POPTR_001G242600v3	20.96
LOC112324786	berberine bridge enzyme-like 8	112324786	POPTR_001G462200v3	20.92
LOC7483980	18 kDa seed maturation protein	7483980	POPTR_016G046400v3	20.84
LOC7482262	putative beta-D-xylosidase	7482262	POPTR_010G141400v3	20.82
LOC7490642	chaperone protein dnaJ 11, chloroplastic	7490642	POPTR_002G020700v3	20.56
LOC18103031	uncharacterized LOC18103031	18103031	POPTR_011G053300v3	20.29
LOC7470449	uncharacterized LOC7470449	7470449	POPTR_004G184700v3	20.00
LOC18096313	J domain-containing protein required for chloroplast accumulation response 1	18096313	POPTR_002G134300v3	19.52
LOC7464039	organ-specific protein S2	7464039	POPTR_009G114700v3	19.46
LOC7475591	uncharacterized LOC7475591	7475591	POPTR_010G124700v3	19.38
LOC7465524	probable trehalose-phosphate phosphatase F	7465524	POPTR_003G112400v3	19.33
LOC7462135	uncharacterized LOC7462135	7462135	POPTR_008G081000v3	19.08
LOC18106132	11 kDa late embryogenesis abundant protein	18106132	POPTR_T111300v3	19.07
LOC7453636	chaperone protein dnaJ 11, chloroplastic	7453636	POPTR_004G172300v3	19.03
LOC7470587	GDSL esterase/lipase APG	7470587	POPTR_001G191400v3	19.01
LOC7488985	xyloglucan endotransglucosylase/hydrolase protein 24	7488985	POPTR_018G094900v3	18.99
LOC7479211	protein NRT1/ PTR FAMILY 6.3	7479211	POPTR_003G111500v3	18.82
LOC7489155	early nodulin-like protein 1	7489155	POPTR_006G264600v3	18.78
LOC18094096	phosphoribulokinase, chloroplastic	18094096	POPTR_001G134000v3	18.76
LOC18095622	NAC domain-containing protein 72	18095622	POPTR_001G404100v3	18.71
LOC7488158	uncharacterized LOC7488158	7488158	POPTR_009G024500v3	18.67
LOC7468341	beta-carotene hydroxylase 2, chloroplastic	7468341	POPTR_004G074000v3	18.49
LOC7489277	aquaporin TIP1-3	7489277	POPTR_009G027200v3	18.31
LOC18094569	pelargonidin 3-O-(6-caffeoylglucoside) 5-O-(6-O-malonylglucoside) 4'''-malonyltransferase	18094569	POPTR_001G152500v3	18.19
LOC7462607	protein RALF-like 34	7462607	POPTR_007G044700v3	18.16
LOC18107663	inositol oxygenase 2	18107663	POPTR_018G069700v3	18.05
LOC7458131	glycerol-3-phosphate acyltransferase 5	7458131	POPTR_010G201200v3	18.02
LOC7473446	auxin-responsive protein IAA14	7473446	POPTR_008G161200v3	17.96
LOC7474964	acidic endochitinase WIN6-like	7474964		17.94
LOC7475024	uncharacterized LOC7475024	7475024	POPTR_009G070200v3	17.91
LOC7496004	annexin D4	7496004	POPTR_001G024900v3	17.82
LOC7457723	U-box domain-containing protein 19	7457723	POPTR_015G074200v3	17.79
LOC7493180	ubiquinol oxidase 2, mitochondrial	7493180	POPTR_012G001600v3	17.75
LOC7494389	uncharacterized LOC7494389	7494389	POPTR_013G090200v3	17.61
LOC7478518	protein GAST1	7478518	POPTR_001G254100v3	17.54
LOC18095659	dynein light chain 1, cytoplasmic	18095659	POPTR_001G407900v3	17.45
LOC7490956	metallothiol transferase FosB	7490956	POPTR_001G171600v3	17.43
LOC7494287	auxin-responsive protein SAUR21	7494287	POPTR_009G126300v3	17.39
LOC7496907	peroxidase 64	7496907	POPTR_002G018000v3	17.33
LOC7497378	expansin-B3	7497378	POPTR_013G134300v3	17.33
LOC7469655	uncharacterized LOC7469655	7469655	POPTR_009G084400v3	17.27
LOC7497818	uncharacterized LOC7497818	7497818	POPTR_003G135400v3	17.24
LOC7473436	uncharacterized LOC7473436	7473436	POPTR_008G159200v3	17.16
LOC18096890	expansin-like B1	18096890	POPTR_003G083200v3	17.15
LOC7469857	syntaxin-related protein KNOLLE	7469857	POPTR_019G030800v3	17.10
LOC7489643	syntaxin-related protein KNOLLE	7489643	POPTR_013G053200v3	17.01
LOC7470435	endochitinase 2	7470435	POPTR_004G182000v3	16.97
LOC7474391	uncharacterized LOC7474391	7474391	POPTR_010G179300v3	16.84
LOC7472358	9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic	7472358	POPTR_011G112400v3	16.80
LOC18104448	ABC transporter G family member 25	18104448	POPTR_013G111900v3	16.79
LOC7481607	organic cation/carnitine transporter 3	7481607	POPTR_010G174300v3	16.75
LOC7495509	peroxidase 72	7495509	POPTR_007G019300v3	16.70
LOC7495209	stachyose synthase	7495209	POPTR_014G118400v3	16.68
LOC7472467	uncharacterized LOC7472467	7472467	POPTR_008G078000v3	16.60
LOC7492393	galactinol synthase 1	7492393	POPTR_010G042000v3	16.49
LOC18108623	uncharacterized LOC18108623	18108623	POPTR_019G116500v3	16.45
LOC7464498	heavy metal-associated isoprenylated plant protein 9	7464498	POPTR_015G003900v3	16.34
LOC18104599	uncharacterized LOC18104599	18104599	POPTR_013G127900v3	16.32
LOC7454532	uncharacterized LOC7454532	7454532	POPTR_012G094400v3	16.31
LOC18099196	resistance to inhibitors of cholinesterase protein 3	18099196	POPTR_005G114100v3	16.29
LOC112328712	U1 spliceosomal RNA	112328712		16.28
LOC7469668	uncharacterized LOC7469668	7469668	POPTR_009G081900v3	16.26
LOC7483571	17.4 kDa class III heat shock protein	7483571	POPTR_003G071100v3	16.19
LOC18095607	glutelin type-A 3	18095607	POPTR_001G402600v3	16.15
LOC112327842	BURP domain protein RD22-like	112327842	POPTR_006G243700v3	16.12
LOC7470765	uncharacterized LOC7470765	7470765	POPTR_001G289100v3	16.11
LOC18097015	36.4 kDa proline-rich protein	18097015	POPTR_003G111300v3	16.09
LOC18110663	ankyrin repeat-containing protein At5g02620	18110663	POPTR_019G107800v3	16.04
LOC7465228	galactinol synthase 2	7465228	POPTR_013G005900v3	16.00
LOC7480716	protein JASON	7480716	POPTR_002G057000v3	15.96
LOC7463780	uncharacterized LOC7463780	7463780	POPTR_018G046500v3	15.94
LOC7465139	ABC transporter G family member 15	7465139	POPTR_001G255800v3	15.92
LOC18098272	MLO-like protein 4	18098272	POPTR_004G218500v3	15.91
LOC7488722	probably inactive leucine-rich repeat receptor-like protein kinase IMK2	7488722	POPTR_016G126300v3	15.91
LOC7463600	E3 ubiquitin-protein ligase SINAT2	7463600	POPTR_003G215400v3	15.90
LOC7454859	asparagine synthetase [glutamine-hydrolyzing] 1	7454859	POPTR_009G072900v3	15.89
LOC7461177	uncharacterized LOC7461177	7461177	POPTR_004G118700v3	15.87
LOC18097977	18.1 kDa class I heat shock protein	18097977	POPTR_004G187200v3	15.85
LOC7485810	basic leucine zipper 1	7485810	POPTR_010G142900v3	15.85
LOC112325947	uncharacterized LOC112325947	112325947	POPTR_T132100v3	15.82
LOC7460564	uncharacterized LOC7460564	7460564	POPTR_001G059500v3	15.82
LOC7467900	uncharacterized LOC7467900	7467900	POPTR_017G094200v3	15.79
LOC7457873	chlorophyll a-b binding protein 6, chloroplastic	7457873	POPTR_008G041000v3	15.75
LOC7478066	scarecrow-like protein 28	7478066	POPTR_001G109400v3	15.75
LOC7478884	probable xyloglucan endotransglucosylase/hydrolase protein 23	7478884	POPTR_013G005700v3	15.71
LOC7458080	probable pectate lyase 18	7458080	POPTR_012G091500v3	15.69
LOC7496055	ethylene-responsive transcription factor ERF003	7496055	POPTR_001G048200v3	15.68
LOC7474675	36.4 kDa proline-rich protein	7474675	POPTR_006G065500v3	15.67

Lower 100 Genes

Symbol	Function^*	Entrez Gene ID^*	Other ID	PC
LOC7467239	homeobox protein knotted-1-like 2	7467239	POPTR_002G113300v3	-65.62
LOC7486809	caffeic acid 3-O-methyltransferase	7486809	POPTR_014G106600v3	-65.07
LOC18098217	hybrid signal transduction histidine kinase M	18098217	POPTR_004G212900v3	-64.57
LOC18104619	uncharacterized LOC18104619	18104619	POPTR_013G129900v3	-64.14
LOC7465518	14 kDa proline-rich protein DC2.15	7465518	POPTR_003G111400v3	-63.90
LOC18108581	desmethylxanthohumol 6'-O-methyltransferase	18108581	POPTR_019G102900v3	-63.17
LOC18104971	cytochrome P450 CYP82D47	18104971	POPTR_014G037900v3	-62.22
LOC7463625	homeobox protein SBH1	7463625	POPTR_004G004700v3	-61.97
LOC18105479	peroxidase 5	18105479	POPTR_015G003600v3	-61.58
LOC7464036	BURP domain-containing protein BNM2A	7464036	POPTR_009G114600v3	-60.93
LOC7459171	probable glutathione S-transferase	7459171	POPTR_001G431400v3	-60.77
LOC18104827	isoflavone 2'-hydroxylase	18104827	POPTR_014G021700v3	-60.70
LOC18099238	peroxidase 72	18099238	POPTR_005G118700v3	-60.48
LOC18098678	respiratory burst oxidase homolog protein B	18098678	POPTR_005G026200v3	-60.06
LOC18109727	basic 7S globulin	18109727	POPTR_013G070300v3	-59.94
LOC7467535	AT-hook motif nuclear-localized protein 20	7467535	POPTR_008G164500v3	-59.86
LOC7482129	subtilisin-like protease SBT1.3	7482129	POPTR_012G131500v3	-59.63
LOC112323828	uncharacterized LOC112323828	112323828	POPTR_013G007900v3	-59.59
LOC112326669	cytochrome P450 83B1-like	112326669	POPTR_002G026500v3	-59.48
LOC18108832	probable glutathione S-transferase	18108832	POPTR_001G436700v3	-59.09
LOC7480952	cytochrome P450 71B36	7480952	POPTR_008G184400v3	-59.08
LOC7490667	cytochrome P450 83B1	7490667	POPTR_002G025800v3	-58.74
LOC18105842	homeobox protein knotted-1-like 6	18105842	POPTR_015G079100v3	-58.57
LOC7458442	aspartyl protease family protein At5g10770	7458442	POPTR_018G014900v3	-58.43
LOC18111166	cytochrome P450 81E8	18111166	POPTR_003G007400v3	-58.32
LOC7494476	uncharacterized acetyltransferase At3g50280	7494476	POPTR_008G065000v3	-58.25
LOC18096896	cationic amino acid transporter 6, chloroplastic	18096896	POPTR_003G083700v3	-58.14
LOC7464039	organ-specific protein S2	7464039	POPTR_009G114700v3	-57.95
LOC7478680	pathogenesis-related protein 1	7478680	POPTR_001G288600v3	-57.85
LOC7462606	subtilisin-like protease SBT1.9	7462606	POPTR_007G045100v3	-57.74
LOC18094338	protein LATERAL ROOT PRIMORDIUM 1	18094338	POPTR_001G027700v3	-57.74
LOC18098801	disease resistance protein RPM1	18098801	POPTR_005G035700v3	-57.50
LOC7465124	osmotin-like protein	7465124	POPTR_001G237600v3	-57.48
LOC112325798	uncharacterized LOC112325798	112325798		-57.03
LOC7458443	aspartyl protease family protein At5g10770	7458443	POPTR_018G014700v3	-56.90
LOC18096306	ent-kaurene oxidase, chloroplastic	18096306	POPTR_002G129700v3	-56.79
LOC18102467	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4	18102467	POPTR_010G070700v3	-56.76
LOC7471071	squamosa promoter-binding-like protein 6	7471071	POPTR_008G097900v3	-56.71
LOC18098895	flavonoid 3'-monooxygenase	18098895	POPTR_005G045800v3	-56.63
LOC7475946	G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290	7475946	POPTR_010G025800v3	-56.47
LOC112327473	probable glutathione S-transferase	112327473	POPTR_001G431700v3	-56.26
LOC18103792	homeobox protein knotted-1-like 2	18103792	POPTR_012G087100v3	-56.21
LOC7462868	WUSCHEL-related homeobox 4	7462868	POPTR_002G124100v3	-56.18
LOC7487006	protein NRT1/ PTR FAMILY 5.4	7487006	POPTR_001G027100v3	-56.15
LOC7485450	polyphenol oxidase, chloroplastic	7485450	POPTR_011G047300v3	-56.06
LOC18104828	isoflavone 2'-hydroxylase	18104828	POPTR_014G021800v3	-56.04
LOC18107413	uncharacterized LOC18107413	18107413		-56.01
LOC7491376	probable glutathione S-transferase	7491376	POPTR_001G437000v3	-55.96
LOC18100696	uncharacterized LOC18100696	18100696	POPTR_006G258700v3	-55.79
LOC7463390	protein NRT1/ PTR FAMILY 7.2	7463390	POPTR_014G179400v3	-55.76
LOC7485893	uncharacterized LOC7485893	7485893		-55.59
LOC7482608	acid phosphatase 1	7482608	POPTR_016G139700v3	-55.42
LOC18103101	pathogenesis-related genes transcriptional activator PTI5	18103101	POPTR_011G061700v3	-55.25
LOC112324492	transcription factor RAX2	112324492	POPTR_016G099200v3	-55.18
LOC7494372	kunitz trypsin inhibitor 2	7494372	POPTR_004G067900v3	-55.15
LOC7472738	probable membrane-associated kinase regulator 2	7472738	POPTR_001G098000v3	-55.12
LOC7495544	AP2-like ethylene-responsive transcription factor AIL6	7495544	POPTR_007G011600v3	-54.90
LOC7488162	homeobox-leucine zipper protein HOX11	7488162	POPTR_009G023600v3	-54.87
LOC7486687	basic blue protein	7486687	POPTR_001G209300v3	-54.83
LOC7488774	adenine/guanine permease AZG1	7488774	POPTR_016G133800v3	-54.78
LOC7458915	butyrate--CoA ligase AAE11, peroxisomal	7458915	POPTR_016G034800v3	-54.76
LOC7471962	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3	7471962	POPTR_002G037500v3	-54.72
LOC112326586	uncharacterized LOC112326586	112326586		-54.68
LOC18102366	zinc finger protein 5	18102366	POPTR_010G036400v3	-54.64
LOC18104942	transcription factor MYB77	18104942	POPTR_014G035100v3	-54.63
LOC18101322	putative glycine-rich cell wall structural protein 1	18101322	POPTR_008G028100v3	-54.48
LOC7491401	benzyl alcohol O-benzoyltransferase	7491401	POPTR_001G448000v3	-54.40
LOC7484341	ethylene-responsive transcription factor ERF113	7484341	POPTR_012G108500v3	-54.40
LOC18107228	F-box/kelch-repeat protein At3g27150	18107228	POPTR_017G069500v3	-54.34
LOC7466875	amino acid permease 4	7466875	POPTR_005G068900v3	-54.22
LOC7480605	allene oxide synthase 3	7480605	POPTR_004G149000v3	-54.20
LOC112327500	homeobox protein knotted-1-like 1	112327500	POPTR_005G014200v3	-54.04
LOC18108209	uncharacterized LOC18108209	18108209	POPTR_019G027100v3	-53.97
LOC18098174	AT-hook motif nuclear-localized protein 25	18098174	POPTR_004G208600v3	-53.86
LOC7497799	protein SPIRAL1-like 5	7497799	POPTR_003G131600v3	-53.85
LOC7480363	probable L-type lectin-domain containing receptor kinase S.5	7480363	POPTR_001G455500v3	-53.80
LOC7482599	cytochrome P450 71A1	7482599	POPTR_016G137600v3	-53.80
LOC7475947	G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290	7475947	POPTR_010G025700v3	-53.77
LOC7469036	cytochrome P450 71B36	7469036	POPTR_008G184900v3	-53.75
LOC7457890	protein NRT1/ PTR FAMILY 2.7	7457890	POPTR_008G045100v3	-53.69
LOC18105023	cytochrome P450 734A1	18105023	POPTR_014G043100v3	-53.63
LOC18100930	amino acid permease 4	18100930	POPTR_007G100100v3	-53.58
LOC7463303	alpha carbonic anhydrase 7	7463303	POPTR_009G010200v3	-53.56
LOC7462904	dof zinc finger protein DOF1.6	7462904	POPTR_002G129600v3	-53.55
LOC7488130	uncharacterized LOC7488130	7488130		-53.55
LOC7491637	trihelix transcription factor PTL	7491637	POPTR_010G235000v3	-53.48
LOC18098587	homeobox protein knotted-1-like 1	18098587	POPTR_005G017200v3	-53.44
LOC7455945	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 7	7455945	POPTR_011G109900v3	-53.41
LOC7483143	dof zinc finger protein DOF3.4	7483143	POPTR_007G036400v3	-53.37
LOC7478899	homeobox protein knotted-1-like 1	7478899	POPTR_013G008600v3	-53.32
LOC112329017	metallothionein-like protein type 2	112329017	POPTR_001G041300v3	-53.31
LOC18096094	cytochrome P450 83B1	18096094	POPTR_002G025300v3	-53.29
LOC7480951	cytochrome P450 71B36	7480951	POPTR_008G184000v3	-53.20
LOC7480409	berberine bridge enzyme-like 15	7480409	POPTR_001G463400v3	-53.18
LOC7461382	peroxidase 15	7461382	POPTR_003G214900v3	-53.14
LOC7470575	CASP-like protein 3A2	7470575	POPTR_001G188000v3	-53.13
LOC18095866	indole-3-acetic acid-amido synthetase GH3.6	18095866	POPTR_001G410400v3	-53.10
LOC7492256	uncharacterized LOC7492256	7492256	POPTR_006G213100v3	-53.09
LOC7455947	epidermis-specific secreted glycoprotein EP1	7455947	POPTR_011G110200v3	-53.01
LOC7464678	probable inactive patatin-like protein 9	7464678	POPTR_005G210100v3	-52.99

Lower 100 Genes

Symbol	Function^*	Entrez Gene ID^*	Other ID	PC
LOC18105022	cytochrome P450 734A1	18105022	POPTR_014G043000v3	-59.39
LOC7491394	benzyl alcohol O-benzoyltransferase	7491394	POPTR_001G447500v3	-49.34
LOC7459765	endoglucanase 8	7459765	POPTR_010G109200v3	-46.30
LOC18097400	beta-glucosidase 46	18097400	POPTR_004G019300v3	-45.73
LOC7478050	tubulin beta-1 chain	7478050	POPTR_001G106100v3	-45.32
LOC7495107	auxin transporter-like protein 3	7495107	POPTR_002G087000v3	-43.75
LOC18096496	major latex allergen Hev b 5	18096496	POPTR_002G223100v3	-43.40
LOC7465852	tubulin beta-5 chain	7465852	POPTR_003G125400v3	-43.13
LOC18095988	benzyl alcohol O-benzoyltransferase	18095988	POPTR_001G447400v3	-43.01
LOC7482147	fasciclin-like arabinogalactan protein 12	7482147	POPTR_012G127900v3	-42.85
LOC7496848	glucan endo-1,3-beta-glucosidase 12	7496848	POPTR_002G007300v3	-42.48
LOC7480392	patellin-4	7480392	POPTR_001G461400v3	-42.14
LOC18097241	peroxidase A2	18097241	POPTR_003G214700v3	-42.10
LOC7468527	E3 ubiquitin-protein ligase RNF34	7468527	POPTR_014G158900v3	-42.03
LOC7478636	uncharacterized LOC7478636	7478636	POPTR_009G145700v3	-41.76
LOC7464476	caffeic acid 3-O-methyltransferase 3	7464476	POPTR_015G003100v3	-41.75
LOC7489623	probable RNA-binding protein ARP1	7489623	POPTR_010G216800v3	-40.77
LOC7462495	phosphomethylethanolamine N-methyltransferase	7462495	POPTR_015G039000v3	-40.47
LOC18102014	uncharacterized LOC18102014	18102014	POPTR_009G037500v3	-40.39
LOC7482129	subtilisin-like protease SBT1.3	7482129	POPTR_012G131500v3	-40.08
LOC7479828	trihelix transcription factor PTL	7479828	POPTR_008G025600v3	-39.58
LOC7486746	uncharacterized LOC7486746	7486746	POPTR_012G051500v3	-39.45
LOC18107762	ribulose bisphosphate carboxylase small chain clone 512	18107762	POPTR_018G091400v3	-39.32
LOC7479244	uncharacterized LOC7479244	7479244	POPTR_003G119400v3	-38.99
LOC7495241	probable pectinesterase/pectinesterase inhibitor 7	7495241	POPTR_014G127000v3	-38.97
LOC7469382	probable pectate lyase 8	7469382	POPTR_014G178100v3	-38.61
LOC7484878	serine carboxypeptidase-like 45	7484878	POPTR_012G105500v3	-38.11
LOC7475559	zinc finger CCCH domain-containing protein 15	7475559	POPTR_010G118700v3	-38.08
LOC7453542	cell division cycle 20.2, cofactor of APC complex	7453542	POPTR_019G021800v3	-38.05
LOC18098936	uncharacterized LOC18098936	18098936	POPTR_005G050000v3	-38.03
LOC7492760	uncharacterized LOC7492760	7492760	POPTR_014G095600v3	-37.94
LOC7489643	syntaxin-related protein KNOLLE	7489643	POPTR_013G053200v3	-37.88
LOC7466839	protein ASPARTIC PROTEASE IN GUARD CELL 2	7466839	POPTR_005G063000v3	-37.50
LOC7469857	syntaxin-related protein KNOLLE	7469857	POPTR_019G030800v3	-37.50
LOC7487081	kinesin-like protein KIN-8A	7487081	POPTR_012G058400v3	-37.49
LOC7474219	mavicyanin	7474219	POPTR_010G089900v3	-37.48
LOC7464807	cytochrome b561 domain-containing protein At2g30890	7464807	POPTR_005G204300v3	-37.43
LOC7464614	laccase-12	7464614	POPTR_010G183600v3	-37.22
LOC7495983	ABC transporter B family member 15	7495983	POPTR_017G085000v3	-37.19
LOC7460791	TORTIFOLIA1-like protein 4	7460791	POPTR_010G038900v3	-37.19
LOC18095049	uncharacterized LOC18095049	18095049	POPTR_001G245400v3	-37.05
LOC18101887	protein TOO MANY MOUTHS	18101887	POPTR_008G211800v3	-36.96
LOC7490531	sucrose synthase	7490531	POPTR_018G063500v3	-36.85
LOC112327516	14 kDa proline-rich protein DC2.15-like	112327516	POPTR_001G121900v3	-36.80
LOC7472467	uncharacterized LOC7472467	7472467	POPTR_008G078000v3	-36.58
LOC7467101	high mobility group B protein 13	7467101	POPTR_001G093700v3	-36.55
LOC18106792	reticulon-like protein B17	18106792	POPTR_017G014300v3	-36.55
LOC18101699	uncharacterized LOC18101699	18101699	POPTR_008G192300v3	-36.54
LOC7483997	receptor protein kinase-like protein ZAR1	7483997	POPTR_016G050800v3	-36.54
LOC18104536	trans-resveratrol di-O-methyltransferase	18104536	POPTR_013G120800v3	-36.53
LOC7488337	aspartyl protease family protein 2	7488337	POPTR_008G115900v3	-36.43
LOC7485867	uncharacterized LOC7485867	7485867	POPTR_010G152900v3	-36.42
LOC7491631	serine/threonine-protein kinase D6PKL1	7491631	POPTR_010G236200v3	-36.18
LOC7484755	LRR receptor-like serine/threonine-protein kinase FEI 2	7484755	POPTR_012G071100v3	-36.17
LOC7465494	PLAT domain-containing protein 3	7465494	POPTR_003G107100v3	-36.10
LOC7469655	uncharacterized LOC7469655	7469655	POPTR_009G084400v3	-35.99
LOC7463603	peroxidase A2	7463603	POPTR_003G214800v3	-35.93
LOC18093972	14 kDa proline-rich protein DC2.15	18093972	POPTR_T145400v3	-35.92
LOC18097015	36.4 kDa proline-rich protein	18097015	POPTR_003G111300v3	-35.88
LOC7486757	kinesin-like protein NACK1	7486757	POPTR_012G054400v3	-35.85
LOC7467689	protein WVD2-like 7	7467689	POPTR_001G336300v3	-35.79
LOC7470690	protein IQ-DOMAIN 1	7470690	POPTR_006G226600v3	-35.71
LOC7498063	leucine-rich repeat extensin-like protein 6	7498063	POPTR_010G083000v3	-35.67
LOC7479690	indole-3-acetic acid-induced protein ARG7	7479690	POPTR_002G024500v3	-35.55
LOC7471686	uncharacterized LOC7471686	7471686	POPTR_001G465400v3	-35.45
LOC7455400	probable xyloglucan endotransglucosylase/hydrolase protein 33	7455400	POPTR_014G115000v3	-35.39
LOC7453885	kinesin-like protein NACK1	7453885	POPTR_015G044600v3	-35.38
LOC18099196	resistance to inhibitors of cholinesterase protein 3	18099196	POPTR_005G114100v3	-35.26
LOC18104599	uncharacterized LOC18104599	18104599	POPTR_013G127900v3	-35.20
LOC7471525	protein UPSTREAM OF FLC	7471525	POPTR_005G078300v3	-35.17
LOC7474391	uncharacterized LOC7474391	7474391	POPTR_010G179300v3	-35.13
LOC7478725	uncharacterized LOC7478725	7478725	POPTR_009G090900v3	-35.12
LOC7479749	uncharacterized LOC7479749	7479749	POPTR_002G038200v3	-35.06
LOC7494682	nitrate regulatory gene2 protein	7494682	POPTR_005G249400v3	-35.06
LOC18098786	probable microtubule-binding protein TANGLED	18098786	POPTR_005G033200v3	-35.05
LOC7462100	laccase-12	7462100	POPTR_008G073700v3	-35.01
LOC7481802	patatin-like protein 7	7481802	POPTR_015G122700v3	-34.98
LOC7480040	probable inactive patatin-like protein 9	7480040	POPTR_002G052600v3	-34.97
LOC7479527	uncharacterized LOC7479527	7479527	POPTR_006G192500v3	-34.96
LOC7491637	trihelix transcription factor PTL	7491637	POPTR_010G235000v3	-34.96
LOC7490520	protein BIG GRAIN 1-like A	7490520	POPTR_018G065000v3	-34.66
LOC18108496	probable O-methyltransferase 3	18108496	POPTR_019G093000v3	-34.49
LOC7471566	pleiotropic drug resistance protein 1	7471566	POPTR_006G248500v3	-34.42
LOC7461370	phytoene synthase 2, chloroplastic	7461370	POPTR_003G218000v3	-34.41
LOC7476412	cytochrome P450 81E8	7476412	POPTR_005G143800v3	-34.40
LOC7476311	carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1	7476311	POPTR_004G062900v3	-34.37
LOC7467900	uncharacterized LOC7467900	7467900	POPTR_017G094200v3	-34.37
LOC7459514	uncharacterized LOC7459514	7459514	POPTR_002G250100v3	-34.35
LOC7463670	rho GDP-dissociation inhibitor 1	7463670	POPTR_006G010500v3	-34.30
LOC18104821	putative cyclin-A3-1	18104821	POPTR_014G021100v3	-34.09
LOC7492083	probable metal-nicotianamine transporter YSL7	7492083	POPTR_005G093800v3	-34.06
LOC7482180	probable leucine-rich repeat receptor-like protein kinase At5g63930	7482180	POPTR_012G128700v3	-34.01
LOC7492253	uncharacterized protein At3g28850	7492253	POPTR_006G212700v3	-34.00
LOC7466834	UDP-glucuronate:xylan alpha-glucuronosyltransferase 1	7466834	POPTR_005G061600v3	-33.92
LOC7497799	protein SPIRAL1-like 5	7497799	POPTR_003G131600v3	-33.86
LOC7458288	glucan endo-1,3-beta-glucosidase 12	7458288	POPTR_002G224600v3	-33.82
LOC7485070	alcohol dehydrogenase	7485070	POPTR_007G108400v3	-33.79
LOC18101082	uncharacterized LOC18101082	18101082	POPTR_007G057800v3	-33.72
LOC112328254	alcohol dehydrogenase-like	112328254	POPTR_007G108500v3	-33.55
LOC7478856	cellulose synthase-like protein D5	7478856	POPTR_002G200300v3	-33.47

Lower 100 Genes

Symbol	Function^*	Entrez Gene ID^*	Other ID	PC
LOC7489432	GDSL esterase/lipase At1g29670	7489432	POPTR_018G089400v3	-69.82
LOC18110359	GDSL esterase/lipase At1g29670	18110359	POPTR_018G089200v3	-63.62
LOC7478081	protein HOTHEAD	7478081	POPTR_001G111500v3	-60.86
LOC7461571	GDSL esterase/lipase At1g29660	7461571	POPTR_018G088600v3	-60.79
LOC7479083	thiamine thiazole synthase 2, chloroplastic	7479083	POPTR_004G020500v3	-59.82
LOC7457873	chlorophyll a-b binding protein 6, chloroplastic	7457873	POPTR_008G041000v3	-59.42
LOC18100640	LRR receptor-like serine/threonine-protein kinase ERECTA	18100640	POPTR_006G220100v3	-59.19
LOC7494899	cytochrome P450 77A3	7494899	POPTR_008G025500v3	-57.90
LOC18107755	GDSL esterase/lipase At1g29660	18107755	POPTR_018G089500v3	-57.77
LOC18097807	probable carboxylesterase 1	18097807	POPTR_004G142900v3	-56.22
LOC7471197	GDSL esterase/lipase At4g28780	7471197	POPTR_002G253400v3	-55.69
LOC7496048	linoleate 13S-lipoxygenase 2-1, chloroplastic	7496048	POPTR_001G015400v3	-55.68
LOC7471832	chlorophyll a-b binding protein of LHCII type 1	7471832	POPTR_011G079500v3	-55.67
LOC7461618	protein ECERIFERUM 3	7461618	POPTR_018G099400v3	-54.55
LOC18106708	ABC transporter G family member 11	18106708	POPTR_017G155300v3	-54.34
LOC7463044	expansin-A10	7463044	POPTR_004G123200v3	-54.00
LOC18100345	auxin-binding protein ABP19a	18100345	POPTR_006G142600v3	-53.91
LOC7469999	aureusidin synthase	7469999	POPTR_004G156500v3	-53.84
LOC7461568	GDSL esterase/lipase At1g29670	7461568	POPTR_018G088500v3	-53.42
LOC7484752	uncharacterized LOC7484752	7484752	POPTR_012G070600v3	-52.63
LOC18105987	probable galactinol--sucrose galactosyltransferase 2	18105987	POPTR_016G002300v3	-52.47
LOC7455630	zinc finger protein 8	7455630	POPTR_006G195100v3	-52.22
LOC7482588	non-specific lipid-transfer protein 1	7482588	POPTR_016G135800v3	-51.55
LOC7463666	anthocyanidin 3-O-glucosyltransferase 2	7463666	POPTR_006G010000v3	-51.13
LOC7474394	fatty alcohol:caffeoyl-CoA acyltransferase	7474394	POPTR_010G180000v3	-50.55
LOC7461193	protein TIC 62, chloroplastic	7461193	POPTR_004G150300v3	-50.44
LOC7485534	thiamine thiazole synthase 2, chloroplastic	7485534	POPTR_011G025200v3	-50.43
LOC7485729	3-ketoacyl-CoA synthase 12	7485729	POPTR_001G234500v3	-50.42
LOC7493257	DNA damage-repair/toleration protein DRT100	7493257	POPTR_003G207000v3	-50.26
LOC7470700	GATA transcription factor 21	7470700	POPTR_006G229200v3	-50.03
LOC18109826	linoleate 13S-lipoxygenase 2-1, chloroplastic	18109826	POPTR_001G015600v3	-49.76
LOC7463588	protein YLS3	7463588	POPTR_003G217000v3	-49.74
LOC7463155	photosystem II 22 kDa protein, chloroplastic	7463155	POPTR_002G083500v3	-49.72
LOC18095620	beta-glucosidase 18	18095620	POPTR_001G403900v3	-49.44
LOC7493970	chlorophyll a-b binding protein of LHCII type 1	7493970	POPTR_005G239200v3	-49.24
LOC18104896	photosystem I chlorophyll a/b-binding protein 5, chloroplastic	18104896	POPTR_014G029700v3	-49.21
LOC7493971	chlorophyll a-b binding protein of LHCII type 1	7493971	POPTR_005G239300v3	-49.03
LOC7455614	probable mannitol dehydrogenase	7455614	POPTR_006G199100v3	-48.95
LOC7469083	glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplastic	7469083	POPTR_008G195100v3	-48.78
LOC18095653	chlorophyll a-b binding protein 13, chloroplastic	18095653	POPTR_001G407100v3	-48.47
LOC18105327	protein ECERIFERUM 1	18105327	POPTR_014G152300v3	-48.07
LOC18105329	protein ECERIFERUM 1	18105329	POPTR_014G152600v3	-47.95
LOC7458376	14 kDa proline-rich protein DC2.15	7458376	POPTR_018G025900v3	-47.95
LOC7459521	glycine-rich protein 5	7459521	POPTR_002G252400v3	-47.94
LOC18110360	GDSL esterase/lipase At5g45670	18110360	POPTR_018G089300v3	-47.88
LOC7459011	uncharacterized LOC7459011	7459011	POPTR_018G031100v3	-47.84
LOC18099145	probable aquaporin PIP2-8	18099145	POPTR_005G109300v3	-47.69
LOC7488885	axial regulator YABBY 1	7488885	POPTR_014G066700v3	-47.56
LOC7493413	putative cysteine-rich receptor-like protein kinase 20	7493413	POPTR_018G111600v3	-47.47
LOC7469930	putative axial regulator YABBY 2	7469930	POPTR_016G067300v3	-47.41
LOC18094302	linoleate 13S-lipoxygenase 2-1, chloroplastic	18094302	POPTR_001G015500v3	-47.27
LOC7478338	putative UPF0481 protein At3g02645	7478338	POPTR_003G205900v3	-47.19
LOC7476660	pectinesterase	7476660	POPTR_018G051400v3	-47.06
LOC112326879	auxin-binding protein ABP19a-like	112326879	POPTR_003G065300v3	-47.00
LOC7459061	MLP-like protein 423	7459061	POPTR_010G096000v3	-46.97
LOC7495733	leucine-rich repeat extensin-like protein 3	7495733	POPTR_006G245600v3	-46.87
LOC18097853	uncharacterized LOC18097853	18097853	POPTR_004G147300v3	-46.77
LOC7495323	uncharacterized protein ycf23	7495323	POPTR_011G080900v3	-46.70
LOC18097900	proline-rich protein 4	18097900	POPTR_004G168600v3	-46.66
LOC7491995	NAD(P)H-quinone oxidoreductase subunit U, chloroplastic	7491995	POPTR_006G221900v3	-46.65
LOC7454978	photosystem II 10 kDa polypeptide, chloroplastic	7454978	POPTR_011G142200v3	-46.35
LOC18095515	vicilin-like seed storage protein At2g18540	18095515	POPTR_001G393700v3	-46.34
LOC18103531	fructose-bisphosphate aldolase 5, cytosolic	18103531	POPTR_011G165000v3	-46.27
LOC18110979	rubredoxin	18110979	POPTR_013G035700v3	-46.18
LOC7462884	abscisic acid 8'-hydroxylase 4	7462884	POPTR_002G126100v3	-46.05
LOC7475695	auxin-binding protein ABP19a	7475695	POPTR_013G141900v3	-46.02
LOC18094192	glycine cleavage system H protein, mitochondrial	18094192	POPTR_001G144800v3	-45.70
LOC112326027	uncharacterized LOC112326027	112326027	POPTR_T145800v3	-45.68
LOC18103943	silicon efflux transporter LSI2	18103943	POPTR_012G144000v3	-45.56
LOC7454678	zinc finger protein 8	7454678	POPTR_016G060600v3	-45.45
LOC7471126	photosystem I reaction center subunit XI, chloroplastic	7471126	POPTR_002G239700v3	-45.40
LOC7456308	chaperone protein dnaJ C76, chloroplastic	7456308	POPTR_007G072600v3	-45.39
LOC7468515	fatty acid hydroperoxide lyase, chloroplastic	7468515	POPTR_014G155800v3	-45.30
LOC7485185	zinc-finger homeodomain protein 9	7485185	POPTR_012G040900v3	-45.21
LOC7495294	alpha-farnesene synthase	7495294	POPTR_011G031800v3	-45.18
LOC18098559	psbP domain-containing protein 1, chloroplastic	18098559	POPTR_005G010700v3	-45.14
LOC18098679	formin-like protein 11	18098679	POPTR_005G026300v3	-44.89
LOC7467036	beta-carotene isomerase D27, chloroplastic	7467036	POPTR_001G083300v3	-44.84
LOC18105332	protein ECERIFERUM 1	18105332	POPTR_014G152900v3	-44.79
LOC7472460	GDSL esterase/lipase At1g06990	7472460	POPTR_008G076600v3	-44.76
LOC7489712	myb-related protein 306	7489712	POPTR_013G067500v3	-44.58
LOC7461508	putative S-adenosyl-L-methionine-dependent methyltransferase Mvan_0910	7461508	POPTR_002G260300v3	-44.36
LOC7463840	haloalkane dehalogenase	7463840	POPTR_001G201500v3	-44.20
LOC7464751	NAD(P)H-quinone oxidoreductase subunit N, chloroplastic	7464751	POPTR_013G160600v3	-44.11
LOC7497862	cellulose synthase-like protein G3	7497862	POPTR_003G142300v3	-44.04
LOC18109217	G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410	18109217	POPTR_004G028700v3	-44.03
LOC7460107	uncharacterized LOC7460107	7460107	POPTR_009G155300v3	-43.82
LOC7477424	ribulose bisphosphate carboxylase small chain, chloroplastic	7477424	POPTR_004G100000v3	-43.71
LOC18106819	peptidyl-prolyl cis-trans isomerase FKBP16-3, chloroplastic	18106819	POPTR_017G017500v3	-43.64
LOC7482994	UDP-glycosyltransferase 88B1	7482994	POPTR_012G036000v3	-43.63
LOC7467372	photosystem II 5 kDa protein, chloroplastic	7467372	POPTR_009G052500v3	-43.43
LOC7463976	aquaporin AQPAn.G	7463976	POPTR_009G128500v3	-43.09
LOC7455648	peroxiredoxin Q, chloroplastic	7455648	POPTR_006G137500v3	-43.09
LOC7482788	chlorophyll a-b binding protein 7, chloroplastic	7482788	POPTR_001G056700v3	-43.08
LOC18094096	phosphoribulokinase, chloroplastic	18094096	POPTR_001G134000v3	-43.01
LOC7482333	ABC transporter G family member 15	7482333	POPTR_009G051200v3	-43.00
LOC18096300	subtilisin-like protease SBT1.9	18096300	POPTR_002G124500v3	-42.97
LOC7497385	anthocyanidin 3-O-glucosyltransferase 7	7497385	POPTR_013G143900v3	-42.96
LOC18109836	UDP-glycosyltransferase 74E2	18109836	POPTR_017G032700v3	-42.92
LOC7489907	homeobox-leucine zipper protein HDG2	7489907	POPTR_002G230200v3	-42.90

Lower 100 Genes

Symbol	Function^*	Entrez Gene ID^*	Other ID	PC
LOC7497095	endochitinase PR4	7497095	POPTR_019G094000v3	-61.43
LOC18108499	endochitinase EP3	18108499	POPTR_019G093900v3	-59.07
LOC7474214	primary amine oxidase	7474214	POPTR_010G089000v3	-58.49
LOC7493197	chalcone synthase 1	7493197	POPTR_003G176700v3	-57.59
LOC7498090	basic endochitinase CHB4	7498090	POPTR_019G094100v3	-55.38
LOC18101160	probable indole-3-acetic acid-amido synthetase GH3.1	18101160	POPTR_007G050300v3	-54.35
LOC7469845	bark storage protein A	7469845	POPTR_019G050200v3	-53.75
LOC18095154	pathogenesis-related protein 1	18095154	POPTR_T131500v3	-53.68
LOC7465124	osmotin-like protein	7465124	POPTR_001G237600v3	-52.86
LOC7480368	3-hydroxy-3-methylglutaryl-coenzyme A reductase 1	7480368	POPTR_001G457000v3	-51.47
LOC7486336	cytochrome P450 78A7	7486336	POPTR_005G084500v3	-50.21
LOC7493352	EG45-like domain containing protein	7493352	POPTR_018G098200v3	-49.13
LOC18100487	GDSL esterase/lipase At5g45670	18100487	POPTR_006G166800v3	-48.75
LOC18095305	gibberellin-regulated protein 14	18095305	POPTR_001G350600v3	-48.29
LOC7480140	salicylate carboxymethyltransferase	7480140	POPTR_007G021300v3	-47.86
LOC112324307	acidic endochitinase SE2-like	112324307	POPTR_015G023900v3	-47.65
LOC7485450	polyphenol oxidase, chloroplastic	7485450	POPTR_011G047300v3	-47.31
LOC7489106	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4	7489106	POPTR_011G156600v3	-46.58
LOC18100486	GDSL esterase/lipase At5g45670	18100486	POPTR_006G166700v3	-46.43
LOC18094781	uncharacterized LOC18094781	18094781	POPTR_001G188900v3	-46.39
LOC7464794	protodermal factor 1	7464794	POPTR_005G200900v3	-46.14
LOC18103438	probable glutathione S-transferase parC	18103438	POPTR_011G140600v3	-45.81
LOC7493198	chalcone synthase 1	7493198	POPTR_003G176800v3	-45.59
LOC7465052	probable indole-3-acetic acid-amido synthetase GH3.1	7465052	POPTR_001G298300v3	-44.98
LOC112325615	uncharacterized LOC112325615	112325615		-44.92
LOC7479547	class V chitinase	7479547	POPTR_006G188300v3	-44.87
LOC18097932	uncharacterized LOC18097932	18097932	POPTR_T020000v3	-44.35
LOC18105663	acidic endochitinase	18105663	POPTR_015G024100v3	-44.32
LOC7465826	leucoanthocyanidin dioxygenase	7465826	POPTR_003G119100v3	-43.97
LOC18108208	uncharacterized LOC18108208	18108208	POPTR_019G027000v3	-43.74
LOC18108209	uncharacterized LOC18108209	18108209	POPTR_019G027100v3	-43.51
LOC18108207	uncharacterized LOC18108207	18108207	POPTR_019G026900v3	-43.36
LOC18107416	cinnamoyl-CoA reductase-like SNL6	18107416	POPTR_017G110500v3	-42.18
LOC7490928	leucoanthocyanidin dioxygenase	7490928	POPTR_001G113100v3	-42.17
LOC18101882	major allergen Pru ar 1	18101882	POPTR_008G212300v3	-42.12
LOC7478511	glucan endo-1,3-beta-glucosidase	7478511	POPTR_001G255100v3	-41.90
LOC112324670	butyrate--CoA ligase AAE11, peroxisomal-like	112324670	POPTR_017G138400v3	-41.70
LOC18109964	uncharacterized LOC18109964	18109964	POPTR_T055700v3	-41.56
LOC18106561	butyrate--CoA ligase AAE11, peroxisomal	18106561	POPTR_T116500v3	-41.41
LOC7453765	carbonic anhydrase 2	7453765	POPTR_015G076000v3	-41.35
LOC7472993	dirigent protein 23	7472993	POPTR_001G214600v3	-41.15
LOC7468057	probable 2-oxoglutarate-dependent dioxygenase At5g05600	7468057	POPTR_006G101100v3	-41.04
LOC18106059	anthocyanidin 3-O-glucosyltransferase 2	18106059	POPTR_016G017100v3	-41.01
LOC7484626	non-specific lipid-transfer protein 1	7484626	POPTR_006G108100v3	-40.92
LOC7467474	endochitinase PR4	7467474	POPTR_019G093800v3	-40.86
LOC7479071	cytochrome P450 77A1	7479071	POPTR_004G018800v3	-40.83
LOC7467574	uncharacterized LOC7467574	7467574	POPTR_016G078000v3	-40.64
LOC7478680	pathogenesis-related protein 1	7478680	POPTR_001G288600v3	-40.50
LOC18105664	acidic endochitinase	18105664	POPTR_015G024000v3	-40.49
LOC18100730	UDP-glycosyltransferase 73B4	18100730	POPTR_006G272600v3	-40.22
LOC7493199	chalcone synthase 1	7493199	POPTR_003G176900v3	-39.93
LOC7465055	uncharacterized LOC7465055	7465055		-39.77
LOC7491292	uncharacterized protein At5g01610	7491292	POPTR_014G127500v3	-39.74
LOC18109366	uncharacterized LOC18109366	18109366	POPTR_015G070700v3	-39.68
LOC18109505	uncharacterized LOC18109505	18109505		-39.67
LOC18109264	probable glutathione S-transferase	18109264	POPTR_011G140400v3	-39.63
LOC7469860	apyrase 2	7469860	POPTR_019G031200v3	-39.57
LOC7495526	probable pectinesterase 53	7495526	POPTR_007G015700v3	-39.08
LOC18102535	putative Myb family transcription factor At1g14600	18102535	POPTR_010G099600v3	-38.89
LOC18096340	cucumber peeling cupredoxin	18096340	POPTR_002G150600v3	-38.86
LOC7496976	cytochrome P450 86A8	7496976	POPTR_014G085800v3	-38.67
LOC7475620	leucoanthocyanidin reductase	7475620	POPTR_015G050200v3	-38.46
LOC7458180	cytochrome P450 86A7	7458180	POPTR_003G129100v3	-38.36
LOC7469036	cytochrome P450 71B36	7469036	POPTR_008G184900v3	-38.30
LOC7476433	uncharacterized LOC7476433	7476433	POPTR_005G148400v3	-38.24
LOC7497312	growth-regulating factor 1	7497312	POPTR_014G012800v3	-38.21
LOC18110625	uncharacterized LOC18110625	18110625	POPTR_019G028800v3	-38.17
LOC7487723	GDSL esterase/lipase At5g33370	7487723	POPTR_013G051100v3	-38.16
LOC18106165	glucan endo-1,3-beta-glucosidase, basic isoform	18106165	POPTR_016G057400v3	-38.10
LOC18096165	protodermal factor 1	18096165	POPTR_002G060800v3	-37.96
LOC18094858	protein HOTHEAD	18094858	POPTR_001G200800v3	-37.95
LOC7477191	major allergen Pru ar 1	7477191	POPTR_010G000600v3	-37.82
LOC7470074	36.4 kDa proline-rich protein	7470074	POPTR_018G126000v3	-37.59
LOC18100766	transcription factor WER	18100766	POPTR_006G275900v3	-37.43
LOC7471942	dihydroflavonol 4-reductase	7471942	POPTR_002G033600v3	-37.34
LOC18106559	butyrate--CoA ligase AAE11, peroxisomal	18106559		-37.31
LOC18096598	pectinesterase	18096598	POPTR_003G001900v3	-37.24
LOC18104805	cytochrome b5	18104805	POPTR_014G019200v3	-37.05
LOC7460519	chalcone synthase 1	7460519	POPTR_001G051500v3	-37.04
LOC7497264	myb-related protein 308	7497264	POPTR_002G173900v3	-37.03
LOC18098314	protein DMP3	18098314	POPTR_004G223500v3	-36.93
LOC18111197	pectinesterase	18111197	POPTR_T151500v3	-36.84
LOC7478165	dynamin-related protein 4C	7478165	POPTR_003G024800v3	-36.80
LOC18104574	cytochrome P450 82G1	18104574	POPTR_013G125300v3	-36.76
LOC7466021	WD repeat-containing protein LWD1	7466021	POPTR_006G209000v3	-36.75
LOC7466071	GDSL esterase/lipase CPRD49	7466071	POPTR_016G115800v3	-36.68
LOC18096599	pectinesterase	18096599	POPTR_003G002100v3	-36.56
LOC7477833	transcription factor MYB13	7477833	POPTR_001G086700v3	-36.43
LOC18107881	beta-amyrin 28-oxidase	18107881	POPTR_018G149300v3	-36.40
LOC18102943	(3S,6E)-nerolidol synthase 1	18102943	POPTR_011G032300v3	-36.12
LOC7468120	transcription factor MYB108	7468120	POPTR_010G149900v3	-36.12
LOC7475657	heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic	7475657	POPTR_015G043400v3	-36.10
LOC18098695	shikimate O-hydroxycinnamoyltransferase	18098695	POPTR_005G028000v3	-36.09
LOC7456109	uncharacterized LOC7456109	7456109		-36.07
LOC7475030	flavonoid 3',5'-hydroxylase 1	7475030	POPTR_009G069100v3	-36.07
LOC7491288	endoglucanase 17	7491288	POPTR_014G126900v3	-36.06
LOC7463139	probable WRKY transcription factor 43	7463139	POPTR_015G099200v3	-35.96
LOC7478149	dynamin-related protein 4C	7478149	POPTR_003G024600v3	-35.95
LOC7461977	probable pectinesterase 68	7461977	POPTR_003G076900v3	-35.94
LOC7484857	uncharacterized LOC7484857	7484857	POPTR_012G101800v3	-35.82

Lower 100 Genes

Symbol	Function^*	Entrez Gene ID^*	Other ID	PC
LOC7468487	probable pectinesterase/pectinesterase inhibitor 35	7468487	POPTR_014G149700v3	-48.15
LOC7473251	thioredoxin H-type 2	7473251	POPTR_008G194100v3	-44.43
LOC7466811	endochitinase WIN8	7466811	POPTR_004G182100v3	-44.27
LOC7470402	ubiquitin-conjugating enzyme E2 10	7470402	POPTR_004G175000v3	-43.21
LOC18102584	uncharacterized LOC18102584	18102584		-42.69
LOC7492393	galactinol synthase 1	7492393	POPTR_010G042000v3	-41.62
LOC7456784	squamosa promoter-binding-like protein 3	7456784	POPTR_004G046700v3	-41.31
LOC7470239	uncharacterized LOC7470239	7470239	POPTR_004G051500v3	-40.82
LOC18104534	fasciclin-like arabinogalactan protein 13	18104534	POPTR_013G120600v3	-40.66
LOC7483121	calmodulin-like protein 1	7483121	POPTR_007G042900v3	-37.42
LOC18104906	uncharacterized LOC18104906	18104906	POPTR_014G030700v3	-37.28
LOC7462890	phosphatidylserine decarboxylase proenzyme 3	7462890	POPTR_002G127000v3	-37.11
LOC7458209	aluminum-activated malate transporter 9	7458209	POPTR_003G134100v3	-36.08
LOC112324129	extensin-2-like	112324129		-35.92
LOC7461263	MLP-like protein 28	7461263	POPTR_017G051100v3	-35.39
LOC18097045	homeobox protein BEL1 homolog	18097045	POPTR_003G131300v3	-35.01
LOC7476706	uncharacterized LOC7476706	7476706	POPTR_003G138700v3	-34.89
LOC18106407	mannose/glucose-specific lectin	18106407	POPTR_017G011900v3	-34.75
LOC7469331	fasciclin-like arabinogalactan protein 2	7469331	POPTR_014G168100v3	-34.68
LOC7491320	monothiol glutaredoxin-S9	7491320	POPTR_014G134300v3	-34.59
LOC7462325	early nodulin-like protein 1	7462325	POPTR_011G117800v3	-34.41
LOC7473446	auxin-responsive protein IAA14	7473446	POPTR_008G161200v3	-34.28
LOC112324764	uncharacterized LOC112324764	112324764		-34.26
LOC18109646	pathogenesis-related protein 1	18109646	POPTR_009G083100v3	-34.22
LOC7457994	E3 ubiquitin-protein ligase RNF165	7457994	POPTR_014G139400v3	-34.18
LOC18102077	pathogenesis-related protein 1	18102077	POPTR_009G083300v3	-34.16
LOC7488718	abscisic acid receptor PYL4	7488718	POPTR_016G125400v3	-33.90
LOC7479080	kirola	7479080	POPTR_004G020100v3	-33.80
LOC7474736	oxysterol-binding protein-related protein 4C	7474736	POPTR_006G076400v3	-33.60
LOC112327994	probable pectate lyase 18	112327994	POPTR_006G196400v3	-33.45
LOC7487337	abscisic acid receptor PYL4	7487337	POPTR_006G104100v3	-33.36
LOC7480132	protein RADIALIS-like 3	7480132	POPTR_007G023800v3	-33.24
LOC18100732	probable sarcosine oxidase	18100732	POPTR_006G272800v3	-33.07
LOC18111301	monothiol glutaredoxin-S9	18111301	POPTR_002G208400v3	-32.99
LOC7482358	myb-related protein 2	7482358	POPTR_013G060200v3	-32.97
LOC18102024	heavy metal-associated isoprenylated plant protein 16	18102024	POPTR_009G048300v3	-32.87
LOC7486494	probable LRR receptor-like serine/threonine-protein kinase At1g53440	7486494	POPTR_016G092700v3	-32.77
LOC112326113	36.4 kDa proline-rich protein-like	112326113	POPTR_T162900v3	-32.68
LOC7469660	pathogenesis-related protein 1B	7469660	POPTR_009G083000v3	-32.55
LOC18099742	36.4 kDa proline-rich protein	18099742	POPTR_006G008500v3	-32.40
LOC18105965	uncharacterized LOC18105965	18105965	POPTR_015G119800v3	-32.36
LOC18101489	uncharacterized LOC18101489	18101489		-32.31
LOC7465161	expansin-A8	7465161	POPTR_013G154700v3	-32.30
LOC7460537	cytochrome P450 78A5	7460537	POPTR_001G054800v3	-32.25
LOC18104342	metalloendoproteinase 1	18104342	POPTR_013G100400v3	-32.03
LOC7473221	galactinol synthase 1	7473221	POPTR_008G189400v3	-32.01
LOC7469203	pathogen-related protein	7469203	POPTR_005G188300v3	-31.91
LOC112325907	protein JINGUBANG-like	112325907	POPTR_T124000v3	-31.84
LOC7453712	36.4 kDa proline-rich protein	7453712	POPTR_016G015500v3	-31.79
LOC7459236	expansin-A8	7459236	POPTR_019G057500v3	-31.74
LOC112326567	extensin-2	112326567		-31.73
LOC7472750	homeobox protein BEL1 homolog	7472750	POPTR_001G100800v3	-31.70
LOC7469204	pathogen-related protein	7469204	POPTR_005G188400v3	-31.70
LOC7456620	omega-hydroxypalmitate O-feruloyl transferase	7456620	POPTR_015G100800v3	-31.51
LOC18094599	ethylene-responsive transcription factor ERF039	18094599	POPTR_001G155700v3	-31.44
LOC7492797	uncharacterized LOC7492797	7492797	POPTR_014G102500v3	-31.20
LOC7493563	cysteine-rich repeat secretory protein 60	7493563	POPTR_004G086000v3	-31.12
LOC7479183	ABC transporter G family member 11	7479183	POPTR_005G073100v3	-31.10
LOC7489433	uncharacterized LOC7489433	7489433	POPTR_018G104500v3	-31.03
LOC18101639	protein SIEVE ELEMENT OCCLUSION B	18101639	POPTR_008G183200v3	-31.00
LOC7484402	probable (S)-N-methylcoclaurine 3'-hydroxylase isozyme 2	7484402	POPTR_012G136600v3	-30.97
LOC7453588	myb-related protein 2	7453588	POPTR_019G032700v3	-30.89
LOC7460667	myb family transcription factor APL	7460667	POPTR_008G081800v3	-30.82
LOC7496463	uncharacterized protein At1g08160	7496463	POPTR_009G003800v3	-30.40
LOC7481790	protein PHLOEM PROTEIN 2-LIKE A9	7481790	POPTR_015G120200v3	-30.40
LOC7468488	transcription factor IBH1	7468488	POPTR_014G149800v3	-30.39
LOC7462444	crocetin glucosyltransferase, chloroplastic	7462444	POPTR_002G236400v3	-30.37
LOC7464039	organ-specific protein S2	7464039	POPTR_009G114700v3	-30.31
LOC7471699	heavy metal-associated isoprenylated plant protein 47	7471699	POPTR_001G468500v3	-30.29
LOC7475804	gibberellin-regulated protein 9	7475804	POPTR_019G083900v3	-30.14
LOC7479851	probable pectate lyase 13	7479851	POPTR_008G032700v3	-30.13
LOC112324789	berberine bridge enzyme-like 8	112324789	POPTR_001G462400v3	-30.10
LOC7460733	protein JINGUBANG	7460733	POPTR_010G050900v3	-30.09
LOC18099182	thaumatin-like protein 1	18099182	POPTR_005G112700v3	-30.08
LOC7484414	uncharacterized LOC7484414	7484414	POPTR_012G085800v3	-29.96
LOC7492280	ethylene-responsive transcription factor ERF017	7492280	POPTR_006G218200v3	-29.91
LOC112326657	glycine-rich cell wall structural protein 1.8-like	112326657	POPTR_001G141800v3	-29.85
LOC18107565	uncharacterized LOC18107565	18107565	POPTR_018G002700v3	-29.77
LOC7488717	mitoferrin	7488717	POPTR_016G125200v3	-29.68
LOC7488343	lysine histidine transporter-like 6	7488343	POPTR_008G118000v3	-29.63
LOC7456777	uncharacterized LOC7456777	7456777	POPTR_004G048000v3	-29.43
LOC18109666	cytochrome P450 81D11	18109666	POPTR_014G020600v3	-29.42
LOC7482091	jacalin-related lectin 19	7482091	POPTR_012G140000v3	-29.23
LOC7479079	kirola	7479079	POPTR_004G020000v3	-29.13
LOC7473898	cationic amino acid transporter 1	7473898	POPTR_013G030900v3	-29.06
LOC7459548	acid phosphatase 1	7459548	POPTR_002G257700v3	-28.89
LOC112325189	metallothionein-like protein type 3	112325189	POPTR_001G400100v3	-28.88
LOC18107140	NAC domain-containing protein 83	18107140	POPTR_017G063300v3	-28.78
LOC7491921	probable serine/threonine-protein kinase PBL15	7491921	POPTR_003G105400v3	-28.71
LOC7473193	transcription factor HBI1	7473193	POPTR_007G023600v3	-28.67
LOC7463179	probable calcium-binding protein CML29	7463179	POPTR_002G088500v3	-28.60
LOC112326660	glycine-rich cell wall structural protein 1.8-like	112326660	POPTR_001G141700v3	-28.46
LOC7463021	protein trichome birefringence-like 43	7463021	POPTR_004G135600v3	-28.45
LOC7461315	protein SIEVE ELEMENT OCCLUSION B	7461315	POPTR_017G071000v3	-28.30
LOC18101860	monothiol glutaredoxin-S2	18101860	POPTR_008G214600v3	-28.21
LOC7496955	O-glucosyltransferase rumi homolog	7496955	POPTR_014G081600v3	-28.18
LOC7460357	probable 2-oxoglutarate-dependent dioxygenase At5g05600	7460357	POPTR_016G117100v3	-28.10
LOC18105712	zinc finger protein CONSTANS-LIKE 6	18105712	POPTR_015G054600v3	-28.10
LOC7461652	probable sucrose-phosphate synthase 3	7461652	POPTR_001G317600v3	-28.09
LOC18099678	jacalin-related lectin 3	18099678	POPTR_005G232400v3	-28.02

Lower 100 Genes

Symbol	Function^*	Entrez Gene ID^*	Other ID	PC
LOC7459521	glycine-rich protein 5	7459521	POPTR_002G252400v3	-35.41
LOC18104130	glycine-rich protein DOT1	18104130	POPTR_013G062100v3	-31.83
LOC18104132	cold-shock protein CS120	18104132	POPTR_013G062300v3	-29.98
LOC7485828	glycine-rich cell wall structural protein	7485828	POPTR_010G146200v3	-27.24
LOC7458168	acid beta-fructofuranosidase 2, vacuolar	7458168	POPTR_003G126300v3	-26.64
LOC7472348	epidermis-specific secreted glycoprotein EP1	7472348	POPTR_011G110000v3	-25.27
LOC7478511	glucan endo-1,3-beta-glucosidase	7478511	POPTR_001G255100v3	-25.02
LOC7483567	dormancy-associated protein homolog 4	7483567	POPTR_003G070500v3	-24.99
LOC7464314	homeobox-leucine zipper protein ATHB-12	7464314	POPTR_012G023700v3	-24.91
LOC7454532	uncharacterized LOC7454532	7454532	POPTR_012G094400v3	-24.86
LOC7494463	uncharacterized LOC7494463	7494463	POPTR_008G061700v3	-24.76
LOC18095468	polyphenol oxidase, chloroplastic	18095468	POPTR_001G388900v3	-24.09
LOC7472351	epidermis-specific secreted glycoprotein EP1	7472351	POPTR_011G110500v3	-23.78
LOC7453944	GATA transcription factor 4	7453944	POPTR_002G142800v3	-23.63
LOC18095889	thioredoxin-like protein CXXS1	18095889	POPTR_001G416500v3	-23.27
LOC7485052	endogenous alpha-amylase/subtilisin inhibitor	7485052	POPTR_007G111500v3	-23.02
LOC18096165	protodermal factor 1	18096165	POPTR_002G060800v3	-22.75
LOC7464794	protodermal factor 1	7464794	POPTR_005G200900v3	-22.68
LOC112327940	uncharacterized LOC112327940	112327940		-22.47
LOC18097308	miraculin	18097308	POPTR_004G000400v3	-22.29
LOC18106964	rust resistance kinase Lr10	18106964	POPTR_017G034700v3	-22.10
LOC18100581	class V chitinase	18100581	POPTR_006G188400v3	-21.95
LOC7471119	putative beta-D-xylosidase	7471119	POPTR_008G108100v3	-21.67
LOC7486082	endogenous alpha-amylase/subtilisin inhibitor	7486082	POPTR_007G111800v3	-21.66
LOC18099013	uncharacterized LOC18099013	18099013	POPTR_005G058200v3	-21.57
LOC7497590	beta-galactosidase	7497590	POPTR_006G144500v3	-21.49
LOC7484381	low-temperature-induced 65 kDa protein	7484381	POPTR_012G141300v3	-21.41
LOC7497320	uncharacterized LOC7497320	7497320	POPTR_014G014500v3	-21.40
LOC7472135	chaperone protein dnaJ 11, chloroplastic	7472135	POPTR_009G131800v3	-21.23
LOC7496123	zeatin O-glucosyltransferase	7496123	POPTR_006G048200v3	-21.02
LOC7461695	kunitz trypsin inhibitor 2	7461695	POPTR_001G309900v3	-21.00
LOC7470970	photosystem II 10 kDa polypeptide, chloroplastic	7470970	POPTR_011G142300v3	-20.90
LOC7498090	basic endochitinase CHB4	7498090	POPTR_019G094100v3	-20.90
LOC7485479	ethylene-responsive transcription factor WIN1	7485479	POPTR_006G069400v3	-20.77
LOC7497748	uncharacterized LOC7497748	7497748	POPTR_007G003600v3	-20.75
LOC18104131	putative glycine-rich cell wall structural protein 1	18104131	POPTR_013G062200v3	-20.75
LOC7478518	protein GAST1	7478518	POPTR_001G254100v3	-20.71
LOC7471192	glycine-rich protein 5	7471192	POPTR_002G252200v3	-20.62
LOC7490642	chaperone protein dnaJ 11, chloroplastic	7490642	POPTR_002G020700v3	-20.61
LOC7488366	transcription factor MYB62	7488366	POPTR_008G122100v3	-20.48
LOC7470586	uncharacterized LOC7470586	7470586	POPTR_001G190700v3	-20.45
LOC7454978	photosystem II 10 kDa polypeptide, chloroplastic	7454978	POPTR_011G142200v3	-20.32
LOC7465525	acid beta-fructofuranosidase	7465525	POPTR_003G112600v3	-20.30
LOC7453636	chaperone protein dnaJ 11, chloroplastic	7453636	POPTR_004G172300v3	-20.21
LOC7477039	4-coumarate--CoA ligase-like 9	7477039	POPTR_010G057000v3	-20.10
LOC7485462	probable galactinol--sucrose galactosyltransferase 6	7485462	POPTR_006G065700v3	-19.84
LOC7456810	stem-specific protein TSJT1	7456810	POPTR_004G040600v3	-19.78
LOC7488407	MLP-like protein 328	7488407	POPTR_008G131300v3	-19.78
LOC18095762	photosystem II 10 kDa polypeptide, chloroplastic	18095762	POPTR_001G438800v3	-19.72
LOC7476361	GDSL esterase/lipase At5g45950	7476361	POPTR_004G051900v3	-19.61
LOC7477401	uncharacterized LOC7477401	7477401	POPTR_004G044300v3	-19.38
LOC7485051	alpha-amylase/subtilisin inhibitor	7485051	POPTR_007G111600v3	-19.25
LOC7454691	malate synthase, glyoxysomal	7454691	POPTR_015G092000v3	-19.24
LOC7491425	light-regulated protein 1, chloroplastic	7491425	POPTR_001G066400v3	-19.00
LOC7469178	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic	7469178	POPTR_005G183000v3	-18.93
LOC18102998	stem-specific protein TSJT1	18102998	POPTR_011G049900v3	-18.78
LOC18095082	leucine-rich repeat extensin-like protein 3	18095082	POPTR_001G260200v3	-18.68
LOC7464286	thylakoid lumenal 17.4 kDa protein, chloroplastic	7464286	POPTR_012G018100v3	-18.57
LOC18097900	proline-rich protein 4	18097900	POPTR_004G168600v3	-18.51
LOC18106572	uncharacterized oxidoreductase At4g09670	18106572	POPTR_017G137300v3	-18.46
LOC7454719	protein SHOOT GRAVITROPISM 5	7454719	POPTR_015G096500v3	-18.41
LOC7482822	ethylene-responsive transcription factor ERF113	7482822	POPTR_001G067600v3	-18.35
LOC18095611	stem-specific protein TSJT1	18095611	POPTR_001G403000v3	-18.25
LOC18106247	NADPH-dependent aldo-keto reductase, chloroplastic	18106247	POPTR_016G102100v3	-18.10
LOC7490956	metallothiol transferase FosB	7490956	POPTR_001G171600v3	-18.09
LOC7470729	oleosin 16 kDa	7470729	POPTR_006G234900v3	-18.07
LOC7460796	repetitive proline-rich cell wall protein	7460796	POPTR_010G072200v3	-17.98
LOC18102048	probable mannitol dehydrogenase	18102048	POPTR_009G063300v3	-17.96
LOC7493352	EG45-like domain containing protein	7493352	POPTR_018G098200v3	-17.92
LOC7488594	cysteine proteinase inhibitor B	7488594	POPTR_002G235800v3	-17.85
LOC7454859	asparagine synthetase [glutamine-hydrolyzing] 1	7454859	POPTR_009G072900v3	-17.77
LOC7461739	uncharacterized LOC7461739	7461739	POPTR_002G152600v3	-17.70
LOC7477614	zinc-finger homeodomain protein 5	7477614	POPTR_005G227900v3	-17.67
LOC7496429	small heat shock protein, chloroplastic	7496429	POPTR_012G022400v3	-17.63
LOC7456215	uncharacterized LOC7456215	7456215	POPTR_001G334500v3	-17.44
LOC18108499	endochitinase EP3	18108499	POPTR_019G093900v3	-17.35
LOC7471736	mitotic spindle checkpoint protein BUBR1	7471736	POPTR_002G002900v3	-17.34
LOC7474182	homocysteine S-methyltransferase 3	7474182	POPTR_010G083600v3	-17.34
LOC7461601	uncharacterized protein At4g14100	7461601	POPTR_T094000v3	-17.25
LOC7454940	uncharacterized LOC7454940	7454940	POPTR_006G087700v3	-17.23
LOC7459996	membrane protein PM19L	7459996	POPTR_010G064200v3	-17.21
LOC7491108	uncharacterized LOC7491108	7491108	POPTR_009G019300v3	-17.21
LOC7497095	endochitinase PR4	7497095	POPTR_019G094000v3	-17.18
LOC7462344	stem-specific protein TSJT1	7462344	POPTR_011G122100v3	-17.11
LOC7484749	isochorismate synthase, chloroplastic	7484749	POPTR_012G070000v3	-17.10
LOC7469550	UDP-glycosyltransferase 74F2	7469550	POPTR_007G140500v3	-17.10
LOC7453998	uncharacterized LOC7453998	7453998		-17.05
LOC7494685	uncharacterized LOC7494685	7494685	POPTR_005G249700v3	-17.04
LOC18105288	caffeoylshikimate esterase	18105288	POPTR_014G129000v3	-17.00
LOC7496687	late embryogenesis abundant protein Lea5	7496687	POPTR_010G012100v3	-16.89
LOC7454855	mitogen-activated protein kinase kinase kinase 18	7454855	POPTR_009G073200v3	-16.83
LOC112327934	ricin-like	112327934	POPTR_006G027800v3	-16.78
LOC7470571	photosynthetic NDH subunit of subcomplex B 3, chloroplastic	7470571	POPTR_001G186800v3	-16.78
LOC7466252	non-specific lipid-transfer protein 1	7466252	POPTR_016G135400v3	-16.71
LOC7487723	GDSL esterase/lipase At5g33370	7487723	POPTR_013G051100v3	-16.71
LOC7492427	glu S.griseus protease inhibitor	7492427	POPTR_010G075400v3	-16.57
LOC18103898	peptidyl-prolyl cis-trans isomerase FKBP17-1, chloroplastic	18103898	POPTR_012G119800v3	-16.55
LOC7495323	uncharacterized protein ycf23	7495323	POPTR_011G080900v3	-16.54
LOC7484850	transcription factor MYB108	7484850	POPTR_008G101400v3	-16.53
LOC18095888	photosynthetic NDH subunit of lumenal location 3, chloroplastic	18095888	POPTR_001G416400v3	-16.52

Lower 100 Genes

Symbol	Function^*	Entrez Gene ID^*	Other ID	PC
LOC7494393	22.0 kDa class IV heat shock protein	7494393	POPTR_013G089200v3	-44.91
LOC7496429	small heat shock protein, chloroplastic	7496429	POPTR_012G022400v3	-42.90
LOC18094241	heat shock 70 kDa protein	18094241	POPTR_001G042600v3	-42.78
LOC7479678	gibberellin-regulated protein 1	7479678	POPTR_002G022600v3	-38.04
LOC18096754	protein HOTHEAD	18096754	POPTR_003G039000v3	-32.63
LOC7455411	probable pectinesterase 53	7455411	POPTR_014G117100v3	-32.35
LOC18106465	heat shock protein 83	18106465	POPTR_017G146600v3	-31.88
LOC7463845	cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1	7463845	POPTR_001G265300v3	-31.23
LOC18097975	18.1 kDa class I heat shock protein	18097975		-30.95
LOC7465124	osmotin-like protein	7465124	POPTR_001G237600v3	-30.06
LOC7485724	transcription factor MYB48	7485724	POPTR_001G235500v3	-29.27
LOC7485270	EG45-like domain containing protein	7485270	POPTR_006G179300v3	-29.10
LOC7454971	class I heat shock protein	7454971	POPTR_006G093500v3	-28.90
LOC112326657	glycine-rich cell wall structural protein 1.8-like	112326657	POPTR_001G141800v3	-28.77
LOC7484902	uncharacterized LOC7484902	7484902	POPTR_012G111000v3	-28.58
LOC18104827	isoflavone 2'-hydroxylase	18104827	POPTR_014G021700v3	-28.50
LOC18098895	flavonoid 3'-monooxygenase	18098895	POPTR_005G045800v3	-27.68
LOC7482258	zinc finger protein GIS3	7482258	POPTR_010G140700v3	-27.57
LOC18094242	heat shock 70 kDa protein	18094242	POPTR_001G042700v3	-27.54
LOC112328776	uncharacterized LOC112328776	112328776		-27.39
LOC7473428	1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 1	7473428	POPTR_008G157400v3	-27.38
LOC18110455	patatin-like protein 2	18110455	POPTR_019G015100v3	-27.36
LOC7475781	carboxymethylenebutenolidase homolog	7475781	POPTR_019G079000v3	-27.26
LOC18104880	uncharacterized LOC18104880	18104880	POPTR_014G027800v3	-27.22
LOC18102943	(3S,6E)-nerolidol synthase 1	18102943	POPTR_011G032300v3	-27.06
LOC7462237	17.9 kDa class II heat shock protein	7462237	POPTR_006G223900v3	-27.04
LOC7465527	protein YABBY 4	7465527	POPTR_003G112800v3	-27.04
LOC7475116	26.5 kDa heat shock protein, mitochondrial	7475116	POPTR_001G192600v3	-26.81
LOC7487006	protein NRT1/ PTR FAMILY 5.4	7487006	POPTR_001G027100v3	-26.68
LOC7492467	WAT1-related protein At1g43650	7492467	POPTR_005G192100v3	-26.58
LOC18102765	putative glycine-rich cell wall structural protein 1	18102765	POPTR_010G230400v3	-26.37
LOC7470074	36.4 kDa proline-rich protein	7470074	POPTR_018G126000v3	-26.14
LOC7475947	G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290	7475947	POPTR_010G025700v3	-25.89
LOC7469845	bark storage protein A	7469845	POPTR_019G050200v3	-25.82
LOC7472606	UDP-glycosyltransferase 83A1	7472606	POPTR_004G123500v3	-25.37
LOC18108150	patatin-like protein 4	18108150	POPTR_T050800v3	-25.14
LOC7464041	BURP domain protein USPL1	7464041	POPTR_009G114300v3	-24.94
LOC7479202	23.6 kDa heat shock protein, mitochondrial	7479202	POPTR_003G109200v3	-24.94
LOC7493404	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase	7493404	POPTR_018G109700v3	-24.92
LOC7459174	probable glutathione S-transferase	7459174	POPTR_001G437400v3	-24.85
LOC7456665	uncharacterized LOC7456665	7456665	POPTR_015G109100v3	-24.85
LOC7467387	18.1 kDa class I heat shock protein	7467387	POPTR_009G049900v3	-24.75
LOC7475946	G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290	7475946	POPTR_010G025800v3	-24.68
LOC7498011	G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290	7498011	POPTR_010G025500v3	-24.45
LOC18098217	hybrid signal transduction histidine kinase M	18098217	POPTR_004G212900v3	-24.42
LOC7470544	uncharacterized LOC7470544	7470544	POPTR_001G204300v3	-24.36
LOC7480952	cytochrome P450 71B36	7480952	POPTR_008G184400v3	-24.33
LOC7465518	14 kDa proline-rich protein DC2.15	7465518	POPTR_003G111400v3	-24.30
LOC7469930	putative axial regulator YABBY 2	7469930	POPTR_016G067300v3	-24.28
LOC7468108	uncharacterized LOC7468108	7468108	POPTR_010G147200v3	-24.02
LOC7493909	NAC domain-containing protein 71	7493909	POPTR_013G079700v3	-23.88
LOC18094550	cationic amino acid transporter 6, chloroplastic	18094550	POPTR_001G150700v3	-23.73
LOC18104420	NAD(P)H-quinone oxidoreductase subunit T, chloroplastic	18104420	POPTR_013G109000v3	-23.69
LOC18106628	15.7 kDa heat shock protein, peroxisomal	18106628	POPTR_017G130700v3	-23.68
LOC7471940	abscisic acid 8'-hydroxylase 1	7471940	POPTR_002G033000v3	-23.66
LOC18100303	ethylene-responsive transcription factor ERF017	18100303	POPTR_006G138800v3	-23.36
LOC7467676	class I heat shock protein	7467676	POPTR_T125900v3	-23.20
LOC112326660	glycine-rich cell wall structural protein 1.8-like	112326660	POPTR_001G141700v3	-23.02
LOC7458915	butyrate--CoA ligase AAE11, peroxisomal	7458915	POPTR_016G034800v3	-22.97
LOC7472734	cell division control protein 48 homolog C	7472734	POPTR_001G097600v3	-22.91
LOC7494528	heat shock protein 83	7494528	POPTR_004G073600v3	-22.91
LOC18097063	endoglucanase 1	18097063	POPTR_003G147600v3	-22.86
LOC7477819	transcription factor MYC4	7477819	POPTR_001G083500v3	-22.69
LOC7466474	uncharacterized LOC7466474	7466474	POPTR_002G084600v3	-22.65
LOC18109033	18.1 kDa class I heat shock protein	18109033		-22.56
LOC18098202	ubiquitin-like protein 5	18098202	POPTR_004G211600v3	-22.48
LOC7493921	uncharacterized LOC7493921	7493921	POPTR_013G085300v3	-22.42
LOC112326528	uncharacterized LOC112326528	112326528		-22.35
LOC7477210	transcription factor HY5-like	7477210	POPTR_010G004200v3	-22.34
LOC7482599	cytochrome P450 71A1	7482599	POPTR_016G137600v3	-22.31
LOC7463577	protochlorophyllide-dependent translocon component 52, chloroplastic	7463577	POPTR_003G219000v3	-22.07
LOC112328045	uncharacterized LOC112328045	112328045		-22.02
LOC18104124	uncharacterized LOC18104124	18104124	POPTR_013G059500v3	-21.92
LOC7470104	sodium transporter HKT1	7470104	POPTR_018G132200v3	-21.91
LOC18097977	18.1 kDa class I heat shock protein	18097977	POPTR_004G187200v3	-21.82
LOC7485893	uncharacterized LOC7485893	7485893		-21.82
LOC7454912	WAT1-related protein At2g37460	7454912	POPTR_006G082700v3	-21.74
LOC18100161	acylphosphatase	18100161		-21.66
LOC7460940	protein FAM32A-like	7460940	POPTR_005G174400v3	-21.64
LOC7481611	18.1 kDa class I heat shock protein	7481611	POPTR_010G175200v3	-21.64
LOC7494466	18.1 kDa class I heat shock protein	7494466	POPTR_008G062300v3	-21.60
LOC7485716	uncharacterized LOC7485716	7485716	POPTR_001G237300v3	-21.57
LOC18104869	subtilisin-like protease SBT1.9	18104869	POPTR_014G026500v3	-21.46
LOC7463460	probable LRR receptor-like serine/threonine-protein kinase At3g47570	7463460	POPTR_010G228300v3	-21.39
LOC7470743	carotenoid cleavage dioxygenase 8 homolog B, chloroplastic	7470743	POPTR_006G238500v3	-21.32
LOC7479985	cytochrome P450 94A1	7479985	POPTR_002G042200v3	-21.32
LOC7474945	cytochrome P450 94C1	7474945	POPTR_009G145400v3	-21.21
LOC7496589	linoleate 13S-lipoxygenase 2-1, chloroplastic	7496589	POPTR_017G046200v3	-21.17
LOC7463075	vignain	7463075	POPTR_015G087400v3	-20.99
LOC7455674	glucan endo-1,3-beta-glucosidase 7	7455674	POPTR_014G182000v3	-20.99
LOC7455941	pathogen-related protein	7455941	POPTR_011G108900v3	-20.99
LOC18102191	18.1 kDa class I heat shock protein	18102191	POPTR_009G147900v3	-20.90
LOC7483571	17.4 kDa class III heat shock protein	7483571	POPTR_003G071100v3	-20.87
LOC7458129	ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic	7458129	POPTR_010G200500v3	-20.81
LOC18098005	putative phospholipid:diacylglycerol acyltransferase 2	18098005	POPTR_004G190100v3	-20.80
LOC18100302	ethylene-responsive transcription factor ERF017	18100302	POPTR_006G138700v3	-20.80
LOC7470735	lachrymatory-factor synthase	7470735	POPTR_006G237100v3	-20.73
LOC18094704	protein TIFY 10A	18094704	POPTR_001G166200v3	-20.71
LOC7494712	glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic	7494712	POPTR_005G254100v3	-20.70
LOC7470027	fructose-bisphosphate aldolase 1, chloroplastic	7470027	POPTR_004G162400v3	-20.67

Lower 100 Genes

Symbol	Function^*	Entrez Gene ID^*	Other ID	PC
LOC18104338	bark storage protein A	18104338	POPTR_013G100800v3	-39.55
LOC18104339	bark storage protein A	18104339	POPTR_013G100700v3	-36.33
LOC18107353	leucine-rich repeat extensin-like protein 3	18107353	POPTR_017G100600v3	-33.75
LOC7470239	uncharacterized LOC7470239	7470239	POPTR_004G051500v3	-32.44
LOC112328050	36.4 kDa proline-rich protein-like	112328050	POPTR_006G008300v3	-29.63
LOC18104481	sucrose transport protein SUC8	18104481	POPTR_013G115200v3	-27.95
LOC7495765	TATA-binding protein-associated factor 2N	7495765	POPTR_006G251300v3	-27.73
LOC18097680	proline-rich protein 4	18097680	POPTR_004G114400v3	-26.49
LOC18104906	uncharacterized LOC18104906	18104906	POPTR_014G030700v3	-26.01
LOC7463760	flavonoid 3'-monooxygenase	7463760	POPTR_018G051300v3	-25.96
LOC112328649	uncharacterized LOC112328649	112328649		-25.55
LOC7478832	putative indole-3-acetic acid-amido synthetase GH3.9	7478832	POPTR_002G206400v3	-25.14
LOC7457966	glutaredoxin-C11	7457966	POPTR_014G134200v3	-24.94
LOC7480791	putative dynamin-related protein 4A	7480791	POPTR_003G024900v3	-24.78
LOC7462890	phosphatidylserine decarboxylase proenzyme 3	7462890	POPTR_002G127000v3	-24.45
LOC112327364	formin-2-like	112327364	POPTR_004G114300v3	-24.07
LOC18100050	protein SCARECROW	18100050	POPTR_006G114200v3	-23.84
LOC18100462	probable RNA-dependent RNA polymerase 5	18100462	POPTR_006G164400v3	-23.73
LOC7472673	3-oxo-Delta(4,5)-steroid 5-beta-reductase	7472673	POPTR_002G120700v3	-23.72
LOC7462826	protein SUPPRESSOR OF GENE SILENCING 3 homolog	7462826	POPTR_003G188100v3	-23.49
LOC7496106	uncharacterized LOC7496106	7496106	POPTR_006G045300v3	-23.41
LOC7473878	protein DMP10	7473878	POPTR_013G027200v3	-23.08
LOC18100331	flavonoid 3'-monooxygenase	18100331	POPTR_006G141400v3	-23.06
LOC18095305	gibberellin-regulated protein 14	18095305	POPTR_001G350600v3	-22.92
LOC7455365	NDR1/HIN1-like protein 12	7455365	POPTR_014G106100v3	-22.90
LOC7479079	kirola	7479079	POPTR_004G020000v3	-22.83
LOC7467972	thaumatin-like protein 1	7467972	POPTR_001G220900v3	-22.39
LOC18103683	transcription repressor KAN1	18103683	POPTR_012G042100v3	-22.39
LOC7461263	MLP-like protein 28	7461263	POPTR_017G051100v3	-22.34
LOC7475437	cell wall / vacuolar inhibitor of fructosidase 1	7475437	POPTR_010G063000v3	-22.24
LOC18111301	monothiol glutaredoxin-S9	18111301	POPTR_002G208400v3	-22.12
LOC18099453	non-specific lipid-transfer protein 2	18099453		-22.00
LOC7464012	protein CASPARIAN STRIP INTEGRITY FACTOR 1	7464012	POPTR_009G119900v3	-21.57
LOC7470074	36.4 kDa proline-rich protein	7470074	POPTR_018G126000v3	-21.52
LOC7457876	tetraspanin-6	7457876	POPTR_008G041600v3	-21.41
LOC7486086	ankyrin repeat-containing protein ITN1	7486086	POPTR_007G110000v3	-21.28
LOC7454690	uncharacterized LOC7454690	7454690	POPTR_015G091900v3	-21.18
LOC7477203	late embryogenesis abundant protein D-29	7477203	POPTR_010G002600v3	-21.16
LOC18097400	beta-glucosidase 46	18097400	POPTR_004G019300v3	-21.15
LOC7485290	protein SMAX1-LIKE 3	7485290	POPTR_006G204500v3	-20.81
LOC7471481	uncharacterized LOC7471481	7471481	POPTR_008G146500v3	-20.77
LOC7491733	protein SHORT-ROOT	7491733	POPTR_007G132000v3	-20.58
LOC7468989	glucan endo-1,3-beta-glucosidase, basic isoform	7468989	POPTR_016G057600v3	-20.49
LOC18099825	uncharacterized LOC18099825	18099825	POPTR_006G042300v3	-20.46
LOC7481846	subtilisin-like protease SBT1.3	7481846	POPTR_015G133800v3	-20.44
LOC112324670	butyrate--CoA ligase AAE11, peroxisomal-like	112324670	POPTR_017G138400v3	-20.44
LOC7460785	wall-associated receptor kinase-like 10	7460785	POPTR_010G040500v3	-20.43
LOC7476404	probable LRR receptor-like serine/threonine-protein kinase At4g37250	7476404	POPTR_005G142300v3	-20.35
LOC7482588	non-specific lipid-transfer protein 1	7482588	POPTR_016G135800v3	-20.29
LOC18104130	glycine-rich protein DOT1	18104130	POPTR_013G062100v3	-20.23
LOC18095006	AAA-ATPase At4g25835	18095006	POPTR_001G231200v3	-20.21
LOC112324098	uncharacterized LOC112324098	112324098		-20.08
LOC18094781	uncharacterized LOC18094781	18094781	POPTR_001G188900v3	-20.06
LOC7462301	dehydration-responsive element-binding protein 3	7462301	POPTR_006G238600v3	-19.97
LOC7478165	dynamin-related protein 4C	7478165	POPTR_003G024800v3	-19.95
LOC18103438	probable glutathione S-transferase parC	18103438	POPTR_011G140600v3	-19.80
LOC7479222	21 kDa protein	7479222	POPTR_003G113700v3	-19.79
LOC7483606	probable LRR receptor-like serine/threonine-protein kinase At1g29720	7483606	POPTR_011G075400v3	-19.77
LOC18094669	pectinesterase	18094669	POPTR_001G162500v3	-19.73
LOC112328379	uncharacterized LOC112328379	112328379		-19.71
LOC112328875	uncharacterized LOC112328875	112328875		-19.70
LOC112324099	uncharacterized LOC112324099	112324099		-19.69
LOC7461315	protein SIEVE ELEMENT OCCLUSION B	7461315	POPTR_017G071000v3	-19.62
LOC112327921	uncharacterized LOC112327921	112327921		-19.57
LOC7485454	cation/H(+) antiporter 20	7485454	POPTR_006G054700v3	-19.52
LOC18104336	bark storage protein B	18104336	POPTR_013G101000v3	-19.52
LOC18103796	protein SIEVE ELEMENT OCCLUSION B	18103796	POPTR_012G090400v3	-19.51
LOC112325615	uncharacterized LOC112325615	112325615		-19.49
LOC7456784	squamosa promoter-binding-like protein 3	7456784	POPTR_004G046700v3	-19.49
LOC18099678	jacalin-related lectin 3	18099678	POPTR_005G232400v3	-19.44
LOC18107608	putative GATA transcription factor 22	18107608	POPTR_018G053600v3	-19.27
LOC18108209	uncharacterized LOC18108209	18108209	POPTR_019G027100v3	-19.19
LOC7459521	glycine-rich protein 5	7459521	POPTR_002G252400v3	-19.17
LOC7463603	peroxidase A2	7463603	POPTR_003G214800v3	-19.13
LOC18095330	protein SIEVE ELEMENT OCCLUSION B	18095330	POPTR_001G340500v3	-19.13
LOC7489106	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4	7489106	POPTR_011G156600v3	-19.11
LOC18104131	putative glycine-rich cell wall structural protein 1	18104131	POPTR_013G062200v3	-19.10
LOC7486891	protein SMAX1-LIKE 3	7486891	POPTR_008G017600v3	-19.08
LOC18110429	putative UPF0481 protein At3g02645	18110429	POPTR_003G208700v3	-18.91
LOC7464036	BURP domain-containing protein BNM2A	7464036	POPTR_009G114600v3	-18.87
LOC7476748	21 kDa protein	7476748	POPTR_015G128300v3	-18.80
LOC7490961	TATA-binding protein-associated factor 2N	7490961	POPTR_001G172700v3	-18.78
LOC7490311	probable copper-transporting ATPase HMA5	7490311	POPTR_001G105800v3	-18.75
LOC7465124	osmotin-like protein	7465124	POPTR_001G237600v3	-18.74
LOC7492407	CLAVATA3/ESR (CLE)-related protein 25	7492407	POPTR_010G039800v3	-18.73
LOC18100688	pectinesterase	18100688	POPTR_T148200v3	-18.67
LOC18096545	CLAVATA3/ESR (CLE)-related protein 41	18096545	POPTR_002G241300v3	-18.59
LOC7465409	zinc finger protein 1	7465409	POPTR_018G021400v3	-18.58
LOC7457887	salt stress-induced hydrophobic peptide ESI3	7457887	POPTR_008G044300v3	-18.57
LOC18104485	protein DETOXIFICATION 54	18104485	POPTR_013G115600v3	-18.56
LOC7486322	epoxide hydrolase A	7486322	POPTR_005G081000v3	-18.55
LOC7465518	14 kDa proline-rich protein DC2.15	7465518	POPTR_003G111400v3	-18.49
LOC7463179	probable calcium-binding protein CML29	7463179	POPTR_002G088500v3	-18.47
LOC18107806	pectinesterase	18107806	POPTR_001G162600v3	-18.40
LOC112328516	uncharacterized LOC112328516	112328516		-18.35
LOC7459093	probable transmembrane ascorbate ferrireductase 3	7459093	POPTR_010G102400v3	-18.33
LOC7463044	expansin-A10	7463044	POPTR_004G123200v3	-18.30
LOC7468487	probable pectinesterase/pectinesterase inhibitor 35	7468487	POPTR_014G149700v3	-18.27
LOC7467040	cytochrome P450 78A9	7467040	POPTR_001G083900v3	-18.25
LOC7454978	photosystem II 10 kDa polypeptide, chloroplastic	7454978	POPTR_011G142200v3	-18.25

Lower 100 Genes

Symbol	Function^*	Entrez Gene ID^*	Other ID	PC
ndhB	NADH dehydrogenase subunit 2	4929763	Poptr_cp094	-23.22
ycf2	Ycf2	4929768	Poptr_cp098	-23.06
LOC18104481	sucrose transport protein SUC8	18104481	POPTR_013G115200v3	-21.54
rbcL	ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit	4929677	Poptr_cp030	-20.97
ndhB	NADH dehydrogenase subunit 2	4929721	Poptr_cp069	-20.88
rpoC1	RNA polymerase beta' subunit	4929644	Poptr_cp011	-20.83
Poptr_cpR019	tRNA-Val	4929673	Poptr_cpR019	-20.81
LOC112327602	uncharacterized LOC112327602	112327602		-20.66
LOC7491169	xyloglucan endotransglucosylase/hydrolase protein 31	7491169	POPTR_009G006600v3	-20.19
atpB	ATP synthase CF1 beta subunit	4929676	Poptr_cp029	-20.12
LOC112323823	DNA-directed RNA polymerase subunit beta-like	112323823		-20.05
petA	cytochrome f	4929683	Poptr_cp036	-20.01
ycf2	Ycf2	4929717	Poptr_cp066	-19.63
psbE	photosystem II protein V	4929687	Poptr_cp040	-19.29
LOC18105360	ATP synthase subunit a	18105360	POPTR_014G168000v3	-19.23
psaJ	photosystem I subunit IX	4929692	Poptr_cp043	-19.14
Poptr_cp018	hypothetical protein	4929657	Poptr_cp018	-19.12
Poptr_cpR041	tRNA-Ile	4929756	Poptr_cpR041	-19.01
psbA	photosystem II protein D1	4929629	Poptr_cp001	-18.92
LOC7489433	uncharacterized LOC7489433	7489433	POPTR_018G104500v3	-18.91
clpP	ATP-dependent Clp protease proteolytic subunit	4929698	Poptr_cp048	-18.86
psbJ	photosystem II protein J	4929684	Poptr_cp037	-18.84
rps12	ribosomal protein S12	4929696	Poptr_cp091	-18.78
ndhE	NADH dehydrogenase subunit 4L	4929742	Poptr_cp081	-18.58
LOC18101860	monothiol glutaredoxin-S2	18101860	POPTR_008G214600v3	-18.54
ccsA	CcsA	4929739	Poptr_cp078	-18.51
trnA	tRNA-Ala	4929729	Poptr_cpR028	-18.48
cemA	envelope membrane protein	4929682	Poptr_cp035	-18.46
rpoC2	RNA polymerase beta'' subunit	4929643	Poptr_cp010	-18.32
psaA	photosystem I P700 chlorophyll a apoprotein A1	4929663	Poptr_cp022	-18.29
LOC18095065	18.2 kDa class I heat shock protein	18095065	POPTR_001G254700v3	-18.21
ndhI	NADH dehydrogenase subunit I	4929744	Poptr_cp083	-18.03
rpl20	ribosomal protein L20	4929695	Poptr_cp046	-18.03
rps4	ribosomal protein S4	4929666	Poptr_cp024	-17.97
ndhK	NADH dehydrogenase subunit K	4929671	Poptr_cp026	-17.92
rpoB	RNA polymerase beta subunit	4929645	Poptr_cp012	-17.84
rps18	ribosomal protein S18	4929694	Poptr_cp045	-17.84
rpl2	ribosomal protein L2	4929771	Poptr_cp100	-17.78
rps12	ribosomal protein S12	4929628	Poptr_cp071	-17.75
atpE	ATP synthase CF1 epsilon subunit	4929675	Poptr_cp028	-17.68
rps7	ribosomal protein S7	4929722	Poptr_cp070	-17.67
LOC7464041	BURP domain protein USPL1	7464041	POPTR_009G114300v3	-17.55
LOC112326578	uncharacterized LOC112326578	112326578		-17.53
trnK	tRNA-Lys	4929630	Poptr_cpR002	-17.40
Poptr_cpR027	tRNA-Ile	4929727	Poptr_cpR027	-17.38
LOC18104336	bark storage protein B	18104336	POPTR_013G101000v3	-17.37
LOC7459902	protein GLUTAMINE DUMPER 5	7459902	POPTR_006G267900v3	-17.34
trnA	tRNA-Ala	4929755	Poptr_cpR040	-17.25
LOC18094550	cationic amino acid transporter 6, chloroplastic	18094550	POPTR_001G150700v3	-17.11
LOC18097015	36.4 kDa proline-rich protein	18097015	POPTR_003G111300v3	-17.01
ndhG	NADH dehydrogenase subunit 6	4929743	Poptr_cp082	-16.98
LOC18103031	uncharacterized LOC18103031	18103031	POPTR_011G053300v3	-16.94
LOC112327508	nicotianamine synthase-like	112327508	POPTR_005G017300v3	-16.92
ndhC	NADH dehydrogenase subunit 3	4929672	Poptr_cp027	-16.90
psaC	photosystem I subunit VII	4929741	Poptr_cp080	-16.89
psaB	photosystem I P700 chlorophyll a apoprotein A2	4929662	Poptr_cp021	-16.77
LOC7473268	luminal-binding protein 4	7473268	POPTR_013G018000v3	-16.63
LOC18097894	auxin-responsive protein SAUR24	18097894	POPTR_004G165300v3	-16.50
Poptr_cpR005	tRNA-Gly	4929636	Poptr_cpR005	-16.38
LOC18094242	heat shock 70 kDa protein	18094242	POPTR_001G042700v3	-16.29
LOC7492393	galactinol synthase 1	7492393	POPTR_010G042000v3	-16.19
ndhJ	NADH dehydrogenase subunit J	4929670	Poptr_cp025	-16.15
LOC18104619	uncharacterized LOC18104619	18104619	POPTR_013G129900v3	-16.08
LOC7459174	probable glutathione S-transferase	7459174	POPTR_001G437400v3	-16.06
rps7	ribosomal protein S7	4929762	Poptr_cp093	-15.86
LOC112325098	monothiol glutaredoxin-S2-like	112325098	POPTR_018G049400v3	-15.85
Poptr_cpR012	tRNA-Ser	4929656	Poptr_cpR012	-15.84
ycf4	photosystem I assembly protein Ycf4	4929681	Poptr_cp034	-15.83
LOC7492461	vacuolar iron transporter homolog 2	7492461	POPTR_005G190800v3	-15.71
LOC7475437	cell wall / vacuolar inhibitor of fructosidase 1	7475437	POPTR_010G063000v3	-15.60
LOC7463625	homeobox protein SBH1	7463625	POPTR_004G004700v3	-15.52
psbK	photosystem II protein K	4929633	Poptr_cp003	-15.45
petB	cytochrome b6	4929703	Poptr_cp053	-15.41
psbC	photosystem II 44 kDa protein	4929655	Poptr_cp017	-15.37
rps14	ribosomal protein S14	4929661	Poptr_cp020	-15.37
rpl33	ribosomal protein L33	4929693	Poptr_cp044	-15.30
LOC18108550	uncharacterized LOC18108550	18108550	POPTR_019G099600v3	-15.21
ycf3	photosystem I assembly protein Ycf3	4929664	Poptr_cp023	-15.18
ndhD	NADH dehydrogenase subunit 4	4929740	Poptr_cp079	-15.16
psbH	photosystem II protein H	4929702	Poptr_cp052	-15.15
LOC112327503	nicotianamine synthase-like	112327503	POPTR_005G014300v3	-15.13
psbD	photosystem II protein D2	4929654	Poptr_cp016	-15.12
LOC7494289	auxin-responsive protein SAUR50	7494289	POPTR_009G126000v3	-15.11
LOC112323706	small nucleolar RNA U3	112323706		-14.99
LOC7464037	uncharacterized LOC7464037	7464037	POPTR_009G114400v3	-14.93
LOC112323707	small nucleolar RNA U3	112323707		-14.91
LOC7487519	indole-3-acetate O-methyltransferase 1	7487519	POPTR_001G359000v3	-14.91
LOC112328887	uncharacterized LOC112328887	112328887		-14.88
LOC7463180	nitrate reductase [NADH]	7463180	POPTR_002G088600v3	-14.83
psaI	photosystem I subunit VIII	4929680	Poptr_cp033	-14.82
LOC18101857	monothiol glutaredoxin-S2	18101857	POPTR_008G214800v3	-14.77
ndhH	NADH dehydrogenase subunit 7	4929746	Poptr_cp085	-14.71
petD	cytochrome b6/f complex subunit IV	4929704	Poptr_cp054	-14.65
LOC7455905	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10	7455905	POPTR_011G066400v3	-14.63
LOC7455621	F-box/kelch-repeat protein At1g15670	7455621	POPTR_006G196900v3	-14.61
LOC7455042	exopolyphosphatase PRUNE1	7455042	POPTR_011G153800v3	-14.59
LOC7468066	ammonium transporter 2	7468066	POPTR_006G102800v3	-14.57
LOC112325374	U1 spliceosomal RNA	112325374		-14.57
rps19	ribosomal protein S19	4929772	Poptr_cp101	-14.51
petG	cytochrome b6/f complex subunit V	4929689	Poptr_cp042	-14.51

Lower 100 Genes

Symbol	Function^*	Entrez Gene ID^*	Other ID	PC
LOC7496928	probable isoaspartyl peptidase/L-asparaginase 2	7496928	POPTR_014G022900v3	-25.34
LOC7468989	glucan endo-1,3-beta-glucosidase, basic isoform	7468989	POPTR_016G057600v3	-19.47
LOC7454948	L-ascorbate peroxidase, cytosolic	7454948	POPTR_006G089000v3	-17.79
LOC18104574	cytochrome P450 82G1	18104574	POPTR_013G125300v3	-17.29
LOC7465565	nodulation receptor kinase	7465565	POPTR_007G004700v3	-16.41
LOC7459891	uncharacterized LOC7459891	7459891	POPTR_018G130300v3	-15.78
LOC18108447	metalloendoproteinase 2-MMP	18108447	POPTR_019G073800v3	-15.77
LOC7484582	receptor-like protein kinase FERONIA	7484582	POPTR_017G097500v3	-15.61
LOC18110355	receptor-like protein kinase FERONIA	18110355	POPTR_017G097800v3	-15.33
LOC18108208	uncharacterized LOC18108208	18108208	POPTR_019G027000v3	-15.23
LOC7490721	heavy metal-associated isoprenylated plant protein 30	7490721	POPTR_001G452400v3	-15.02
LOC7462301	dehydration-responsive element-binding protein 3	7462301	POPTR_006G238600v3	-14.96
LOC7459174	probable glutathione S-transferase	7459174	POPTR_001G437400v3	-14.83
LOC18094040	omega-hydroxypalmitate O-feruloyl transferase	18094040	POPTR_001G128100v3	-14.64
LOC7472993	dirigent protein 23	7472993	POPTR_001G214600v3	-14.48
LOC18110625	uncharacterized LOC18110625	18110625	POPTR_019G028800v3	-14.44
LOC18094937	thaumatin-like protein 1	18094937	POPTR_001G221900v3	-14.37
LOC112324174	uncharacterized LOC112324174	112324174		-14.29
LOC18097897	60S ribosomal protein L23	18097897	POPTR_004G166200v3	-14.26
rpl2	ribosomal protein L2	4929714	Poptr_cp064	-14.25
LOC7456838	phenolic glucoside malonyltransferase 1	7456838		-14.23
LOC7458755	aldehyde dehydrogenase family 2 member C4	7458755	POPTR_018G075000v3	-14.09
LOC7484626	non-specific lipid-transfer protein 1	7484626	POPTR_006G108100v3	-14.08
LOC18102095	gallate 1-beta-glucosyltransferase	18102095	POPTR_009G095300v3	-14.02
LOC7462249	glutaredoxin-C6	7462249	POPTR_006G226900v3	-13.90
LOC7464826	protein DETOXIFICATION 41	7464826	POPTR_005G207500v3	-13.79
LOC7472470	non-specific lipid-transfer protein 1	7472470	POPTR_016G136000v3	-13.66
LOC18104485	protein DETOXIFICATION 54	18104485	POPTR_013G115600v3	-13.59
LOC18094720	putative receptor-like protein kinase At1g72540	18094720	POPTR_001G168000v3	-13.45
LOC7497272	cytochrome P450 78A3	7497272	POPTR_002G175200v3	-13.42
Poptr_cpR038		4929753	Poptr_cpR038	-13.32
LOC18094938	thaumatin-like protein 1	18094938	POPTR_001G221800v3	-13.12
LOC18104338	bark storage protein A	18104338	POPTR_013G100800v3	-13.10
LOC18103379	MLO-like protein 11	18103379	POPTR_011G121600v3	-13.04
LOC7488718	abscisic acid receptor PYL4	7488718	POPTR_016G125400v3	-13.01
LOC18108207	uncharacterized LOC18108207	18108207	POPTR_019G026900v3	-12.98
rpl2	ribosomal protein L2	4929771	Poptr_cp100	-12.87
LOC7490066	gallate 1-beta-glucosyltransferase	7490066	POPTR_009G095100v3	-12.74
LOC112325615	uncharacterized LOC112325615	112325615		-12.67
LOC18106624	glutamine synthetase cytosolic isozyme 1	18106624	POPTR_017G131100v3	-12.66
LOC7488106	dof zinc finger protein DOF3.6	7488106	POPTR_008G055100v3	-12.65
LOC7484367	protein DETOXIFICATION 35	7484367	POPTR_012G144900v3	-12.48
LOC18106059	anthocyanidin 3-O-glucosyltransferase 2	18106059	POPTR_016G017100v3	-12.46
LOC7477438	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.4	7477438	POPTR_004G097100v3	-12.45
LOC18095169	serine carboxypeptidase-like 18	18095169	POPTR_001G291800v3	-12.45
LOC7466021	WD repeat-containing protein LWD1	7466021	POPTR_006G209000v3	-12.39
LOC18109505	uncharacterized LOC18109505	18109505		-12.38
LOC7458076	cytochrome P450 71A1	7458076	POPTR_012G090000v3	-12.37
LOC7483928	leucoanthocyanidin reductase	7483928	POPTR_008G116500v3	-12.33
LOC18096192	putative wall-associated receptor kinase-like 16	18096192	POPTR_002G076000v3	-12.10
LOC18109378	heavy metal-associated isoprenylated plant protein 30	18109378	POPTR_011G149500v3	-11.98
LOC112324367	cell surface glycoprotein 1-like	112324367		-11.93
LOC18098005	putative phospholipid:diacylglycerol acyltransferase 2	18098005	POPTR_004G190100v3	-11.90
LOC18110102	rust resistance kinase Lr10	18110102	POPTR_012G003100v3	-11.87
LOC7480382	probable carboxylesterase 18	7480382	POPTR_001G459400v3	-11.71
LOC18109602	putative receptor-like protein kinase At4g00960	18109602	POPTR_004G026300v3	-11.68
LOC7492298	transcription factor MYB114	7492298	POPTR_006G221200v3	-11.57
LOC7494275	aquaporin PIP1-1	7494275	POPTR_009G127900v3	-11.56
LOC7488587	dCTP pyrophosphatase 1	7488587	POPTR_002G235000v3	-11.52
LOC18110744	cytochrome P450 81D11	18110744	POPTR_T096600v3	-11.50
LOC18109964	uncharacterized LOC18109964	18109964	POPTR_T055700v3	-11.48
LOC7463201	uncharacterized LOC7463201	7463201	POPTR_002G092900v3	-11.46
LOC7487268	L-type lectin-domain containing receptor kinase IV.1	7487268	POPTR_006G088900v3	-11.46
LOC18108209	uncharacterized LOC18108209	18108209	POPTR_019G027100v3	-11.46
LOC7482588	non-specific lipid-transfer protein 1	7482588	POPTR_016G135800v3	-11.44
LOC112327231	DNA ligase 1-like	112327231	POPTR_004G206700v3	-11.43
LOC7465006	enolase-phosphatase E1	7465006	POPTR_T072500v3	-11.40
LOC112327707	5.8S ribosomal RNA	112327707		-11.35
LOC18105663	acidic endochitinase	18105663	POPTR_015G024100v3	-11.31
LOC7467597	glutathione S-transferase L3	7467597	POPTR_016G083500v3	-11.29
Poptr_cpR017	tRNA-Leu	4929668	Poptr_cpR017	-11.24
LOC7461821	transcription factor bHLH30	7461821	POPTR_002G105300v3	-11.22
LOC18102534	protein indeterminate-domain 5, chloroplastic	18102534	POPTR_010G099200v3	-11.21
LOC18102145	AAA-ATPase At3g50940	18102145	POPTR_T171900v3	-11.21
LOC7494558	cinnamoyl-CoA reductase-like SNL6	7494558	POPTR_004G105000v3	-11.19
LOC112323790	uncharacterized LOC112323790	112323790		-11.17
LOC18102584	uncharacterized LOC18102584	18102584		-11.16
LOC7475620	leucoanthocyanidin reductase	7475620	POPTR_015G050200v3	-11.14
LOC7465984	cinnamoyl-CoA reductase-like SNL6	7465984	POPTR_006G178700v3	-11.14
LOC18096734	ABC transporter C family member 8	18096734	POPTR_003G034700v3	-11.12
LOC18094936	thaumatin-like protein 1	18094936	POPTR_001G221700v3	-11.01
LOC18094933	thaumatin-like protein 1	18094933	POPTR_001G221400v3	-11.01
LOC18099641	protein DETOXIFICATION 41	18099641	POPTR_005G207600v3	-10.99
LOC7485066	uncharacterized LOC7485066	7485066	POPTR_007G109700v3	-10.97
LOC18099992	L-type lectin-domain containing receptor kinase IV.1	18099992	POPTR_T083600v3	-10.97
LOC18104819	uncharacterized LOC18104819	18104819	POPTR_014G020900v3	-10.94
LOC18102719	dof zinc finger protein DOF3.6	18102719	POPTR_010G205400v3	-10.87
clpP	ATP-dependent Clp protease proteolytic subunit	4929698	Poptr_cp048	-10.77
Poptr_cpR030		4929731	Poptr_cpR030	-10.76
LOC7494570	cytochrome P450 82G1	7494570	POPTR_004G106600v3	-10.74
LOC18103048	squamosa promoter-binding-like protein 3	18103048	POPTR_011G055900v3	-10.72
LOC7496829	UDP-glycosyltransferase 90A1	7496829	POPTR_001G348100v3	-10.72
LOC18108365	protein DETOXIFICATION 29	18108365	POPTR_019G063500v3	-10.71
LOC18098616	dnaJ homolog subfamily B member 3	18098616	POPTR_005G020300v3	-10.69
LOC7492142	STS14 protein	7492142	POPTR_005G130100v3	-10.69
LOC18101383	uncharacterized LOC18101383	18101383		-10.67
LOC7494361	UDP-glycosyltransferase 88A1	7494361	POPTR_004G069600v3	-10.64
LOC7480140	salicylate carboxymethyltransferase	7480140	POPTR_007G021300v3	-10.55
LOC18106527	silicon efflux transporter LSI2	18106527	POPTR_017G141600v3	-10.54
LOC7492088	alkane hydroxylase MAH1	7492088	POPTR_005G094500v3	-10.52

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