cis; CCTCTAT

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of CCTCTAT

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of CCTCTAT.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.43At2g40750WRKY family transcription factor ((WRKY54)) WRKY

link to other 304 cis elements in ATTED

similar seq.
←CCTCTAT→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; ATAGAGG
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
CCTCTAT1.000.066
ATAAATA0.860.0917
TCTATAT0.840.111
CTATATA0.840.144
TATAAAT0.830.1018
CTCTATA0.820.107
TATATAA0.820.111
TCCTATA0.790.0655
CTATAAA0.790.1063
CCTATAA0.790.0718