cis; TAAATAC

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
CTATAAATAC TATABOX1 [ref]

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of TAAATAC

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of TAAATAC.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.57At3g52800zinc finger (AN1-like) family protein C2H2
0.57At5g49520WRKY family transcription factor ((WRKY48)) WRKY
0.56At1g08320bZIP family transcription factor bZIP
0.56At3g19580zinc finger (C2H2 type) protein 2 (AZF2) ((AZF2)) C2H2
0.56At3g62420bZIP transcription factor family protein bZIP
0.55At4g17500ethylene-responsive element-binding protein 1 (ERF1) / EREBP-2 protein ((ATERF-1)) AP2-EREBP
-0.54At1g14410DNA-binding protein-related WHIRLY
0.53At4g37790homeobox-leucine zipper protein 22 (HAT22) / HD-ZIP protein 22 ((HAT22)) Homeobox
0.52At5g63790no apical meristem (NAM) family protein NAC
0.52At5g04340zinc finger (C2H2 type) family protein ((C2H2)) C2H2
0.52At5g67300myb family transcription factor MYB
0.52At1g62300WRKY family transcription factor ((WRKY6)) WRKY
0.52At4g01250WRKY family transcription factor ((WRKY22)) WRKY
0.51At4g31550WRKY family transcription factor ((WRKY11)) WRKY
0.51At1g27730zinc finger (C2H2 type) family protein (ZAT10) / salt-tolerance zinc finger protein (STZ) ((ZAT10)) C2H2

link to other 304 cis elements in ATTED

similar seq.
←TAAATAC→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; GTATTTA
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
TAAATAC1.000.0636
CTATATA0.900.144
TATAAAT0.890.1018
TATATAA0.890.111
ATAAATA0.880.0917
CCTATAA0.880.0718
CTATAAA0.870.1063
TCTATAT0.850.111
TATATAT0.850.1026
ATATATA0.850.1026