[←][→] vvi   VIT_00018993001 Gene
functional annotation
Function   splicing factor U2af large subunit B  
GO BP
GO CC
GO MF
KEGG vvi03040 [list] [network] Spliceosome (166 genes)
Protein XP_002271463.2  XP_010649165.1  XP_010649166.1  XP_010649167.1  XP_019075002.1  XP_019075003.1 
BLAST XP_002271463.2  XP_010649165.1  XP_010649166.1  XP_010649167.1  XP_019075002.1  XP_019075003.1 
Orthologous [Ortholog page] ATU2AF65A (ath)  AT1G60900 (ath)  LOC4350981 (osa)  LOC4351124 (osa)  LOC7473154 (ppo)  LOC11405354 (mtr)  LOC11429844 (mtr)  LOC100192903 (zma)  LOC100272843 (zma)  LOC100286059 (zma)  LOC100779915 (gma)  LOC100793801 (gma)  LOC101251944 (sly)  LOC101263485 (sly)  LOC101266099 (sly)  LOC103830142 (bra)  LOC103834995 (bra)  LOC103838474 (bra)  LOC103854638 (bra) 
Subcellular
localization
wolf
nucl 9,  mito 1,  golg 1  (predict for XP_002271463.2)
nucl 9,  mito 1,  golg 1  (predict for XP_010649165.1)
chlo 9  (predict for XP_010649166.1)
chlo 9  (predict for XP_010649167.1)
chlo 9  (predict for XP_019075002.1)
chlo 9  (predict for XP_019075003.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002271463.2)
other 8  (predict for XP_010649165.1)
other 2  (predict for XP_010649166.1)
chlo 4  (predict for XP_010649167.1)
other 2  (predict for XP_019075002.1)
other 2  (predict for XP_019075003.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
Genes directly connected with LOC100241076 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.5 LOC100251787 protein SUPPRESSOR OF FRI 4 [detail] 100251787
8.4 LOC100265165 protein RIK [detail] 100265165
8.4 LOC100262399 serine/arginine-rich splicing factor RSZ22 [detail] 100262399
6.6 LOC100256797 regulatory-associated protein of TOR 1 [detail] 100256797
6.3 LOC100246732 protein plastid transcriptionally active 16, chloroplastic [detail] 100246732
6.0 LOC100245761 uncharacterized LOC100245761 [detail] 100245761
4.1 LOC104879798 uncharacterized LOC104879798 [detail] 104879798
Coexpressed
gene list		 [Coexpressed gene list for LOC100241076]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 100241076      
Refseq ID (protein) XP_002271463.2 
XP_010649165.1 
XP_010649166.1 
XP_010649167.1 
XP_019075002.1 
XP_019075003.1 


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