[←][→] ath   AT1G60900 Gene
functional annotation
Function   U2 snRNP auxilliary factor, large subunit, splicing factor  
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (172 genes)  IMP  
GO:0009737 [list] [network] response to abscisic acid  (574 genes)  IDA  
GO CC
GO:0089701 [list] [network] U2AF  (6 genes)  IBA  
GO:0000243 [list] [network] commitment complex  (7 genes)  IBA  
GO:0071004 [list] [network] U2-type prespliceosome  (24 genes)  IBA  
GO:0016607 [list] [network] nuclear speck  (86 genes)  IBA IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA IPI ISM  
GO MF
GO:0030628 [list] [network] pre-mRNA 3'-splice site binding  (9 genes)  IBA  
GO:0008187 [list] [network] poly-pyrimidine tract binding  (31 genes)  IBA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03040 [list] [network] Spliceosome (192 genes)
Protein NP_176287.3 
BLAST NP_176287.3 
Orthologous [Ortholog page] ATU2AF65A (ath)  LOC4350981 (osa)  LOC4351124 (osa)  LOC7473154 (ppo)  LOC11405354 (mtr)  LOC11429844 (mtr)  LOC100192903 (zma)  LOC100241076 (vvi)  LOC100272843 (zma)  LOC100286059 (zma)  LOC100779915 (gma)  LOC100793801 (gma)  LOC101251944 (sly)  LOC101263485 (sly)  LOC101266099 (sly)  LOC103830142 (bra)  LOC103834995 (bra)  LOC103838474 (bra)  LOC103854638 (bra) 
Subcellular
localization
wolf
nucl 10  (predict for NP_176287.3)
Subcellular
localization
TargetP
other 8  (predict for NP_176287.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 8
Genes directly connected with AT1G60900 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.4 AT4G36980 CLK4-associating serine/arginine-rich protein [detail] 829852
9.3 ATU2AF65A U2 snRNP auxilliary factor, large subunit, splicing factor [detail] 829822
8.9 AT1G70620 cyclin-like protein [detail] 843399
8.5 SUA suppressor of abi3-5 [detail] 824590
7.1 RS31 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 825359
6.6 AT2G25760 Protein kinase family protein [detail] 817118
Coexpressed
gene list		 [Coexpressed gene list for AT1G60900]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 842382      
Refseq ID (protein) NP_176287.3 


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