[←][→] sly   101251944 Gene
functional annotation
Function   splicing factor U2af large subunit A  
GO BP
GO CC
GO MF
KEGG sly03040 [list] [network] Spliceosome (188 genes)
Protein XP_004232384.1  XP_025885311.1  XP_025885312.1 
BLAST XP_004232384.1  XP_025885311.1  XP_025885312.1 
Orthologous [Ortholog page] ATU2AF65A (ath)  AT1G60900 (ath)  LOC4350981 (osa)  LOC4351124 (osa)  LOC7473154 (ppo)  LOC11405354 (mtr)  LOC11429844 (mtr)  LOC100192903 (zma)  LOC100241076 (vvi)  LOC100272843 (zma)  LOC100286059 (zma)  LOC100779915 (gma)  LOC100793801 (gma)  LOC101263485 (sly)  LOC101266099 (sly)  LOC103830142 (bra)  LOC103834995 (bra)  LOC103838474 (bra)  LOC103854638 (bra) 
Subcellular
localization
wolf
nucl 10  (predict for XP_004232384.1)
nucl 10  (predict for XP_025885311.1)
chlo 9  (predict for XP_025885312.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for XP_004232384.1)
other 8,  chlo 3  (predict for XP_025885311.1)
mito 5  (predict for XP_025885312.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
sly03013 RNA transport 2
sly03015 mRNA surveillance pathway 2
Genes directly connected with LOC101251944 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.6 LOC101263485 splicing factor U2af large subunit B [detail] 101263485
7.0 LOC101268820 phenylalanine--tRNA ligase alpha subunit, cytoplasmic-like [detail] 101268820
6.9 LOC101266027 nuclear poly(A) polymerase 1 [detail] 101266027
6.7 LOC101259103 RNA-binding protein 39 [detail] 101259103
5.9 LOC101263168 regulator of nonsense transcripts UPF3-like [detail] 101263168
5.8 LOC101256129 tudor domain-containing protein [detail] 101256129
5.6 LOC101265017 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1-like [detail] 101265017
5.1 LOC101248266 single myb histone 6 [detail] 101248266
5.0 LOC101252362 uncharacterized LOC101252362 [detail] 101252362
5.0 LOC101246630 uncharacterized LOC101246630 [detail] 101246630
4.8 LOC101260715 uncharacterized LOC101260715 [detail] 101260715
4.4 LOC101262100 uncharacterized LOC101262100 [detail] 101262100
Coexpressed
gene list		 [Coexpressed gene list for LOC101251944]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 101251944      
Refseq ID (protein) XP_004232384.1 
XP_025885311.1 
XP_025885312.1 


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