[][] zma   ZEAMMB73_Zm00001d003546 Gene
functional annotation
Function   small nuclear ribonucleoprotein LSM1
GO BP
GO CC
GO MF
KEGG zma03018 [list] [network] RNA degradation (175 genes)
Protein NP_001146909.2  XP_008667883.1 
BLAST NP_001146909.2  XP_008667883.1 
Orthologous [Ortholog page] LSM1B (ath)LSM1A (ath)LOC4335963 (osa)LOC11421251 (mtr)LOC11444969 (mtr)LOC100249828 (vvi)LOC100250857 (vvi)LOC100280029 (zma)LOC100306352 (gma)LOC100812441 (gma)LOC101252597 (sly)LOC101254180 (sly)LOC103842307 (bra)LOC103842663 (bra)LOC103859552 (bra)LOC103870068 (bra)
Subcellular
localization
wolf
cyto 5,  chlo 3,  cyto_nucl 3  (predict for NP_001146909.2)
cyto 4,  chlo 1,  extr 1,  cysk 1,  nucl 1,  E.R. 1,  chlo_mito 1,  cysk_plas 1  (predict for XP_008667883.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001146909.2)
other 8  (predict for XP_008667883.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 3
zma03050 Proteasome 3
Genes directly connected with LOC100280518 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
6.0 LOC111589223 26S proteasome non-ATPase regulatory subunit 11 homolog [detail] 111589223
5.4 LOC100422791 uncharacterized LOC100422791 [detail] 100422791
5.1 LOC100280029 uncharacterized LOC100280029 [detail] 100280029
Coexpressed
gene list
[Coexpressed gene list for LOC100280518]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 100280518    
Refseq ID (protein) NP_001146909.2 
XP_008667883.1 


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