[←][→] gma   GLYMA_08G108900 Gene
functional annotation
Function   serine hydroxylmethyltransferase  
GO BP
GO CC
GO MF
KEGG gmx00260 [list] [network] Glycine, serine and threonine metabolism (112 genes)
gmx00460 [list] [network] Cyanoamino acid metabolism (87 genes)
gmx00630 [list] [network] Glyoxylate and dicarboxylate metabolism (128 genes)
gmx00670 [list] [network] One carbon pool by folate (36 genes)
gmx01200 [list] [network] Carbon metabolism (493 genes)
gmx01230 [list] [network] Biosynthesis of amino acids (426 genes)
Protein NP_001355691.1 
BLAST NP_001355691.1 
Orthologous [Ortholog page] EDA36 (ath)  SHM4 (ath)  LOC4350456 (osa)  LOC4352058 (osa)  LOC11415840 (mtr)  LOC11442479 (mtr)  LOC100192461 (zma)  LOC100248779 (vvi)  LOC100815417 (gma)  LOC101256090 (sly)  LOC101259725 (sly)  LOC103833148 (bra)  LOC103863581 (bra) 
Subcellular
localization
wolf
cyto 4,  chlo 3,  cysk 1,  chlo_mito 1,  vacu 1,  cysk_nucl 1,  E.R._vacu 1  (predict for NP_001355691.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001355691.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 7
gma00270 Cysteine and methionine metabolism 5
gma01200 Carbon metabolism 5
gma00670 One carbon pool by folate 3
gma00030 Pentose phosphate pathway 2
Genes directly connected with SHMT on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
12.8 LOC547643 methionine synthase [detail] 547643
10.3 LOC100815417 serine hydroxylmethyltransferase [detail] 100815417
9.5 LOC100815953 adenosylhomocysteinase-like [detail] 100815953
7.7 LOC100786939 adenosylhomocysteinase [detail] 100786939
6.2 LOC100818575 fasciclin-like arabinogalactan protein 15 [detail] 100818575
6.1 LOC100527532 fructose-bisphosphate aldolase 6, cytosolic [detail] 100527532
5.3 LOC100777317 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 [detail] 100777317
5.0 LOC100794303 E3 ubiquitin-protein ligase CIP8 [detail] 100794303
5.0 LOC100781930 F-box/kelch-repeat protein At5g42350 [detail] 100781930
4.7 LOC102668087 uncharacterized LOC102668087 [detail] 102668087
4.5 FAD2-2B fatty acid desaturase-2 [detail] 100805040
Coexpressed
gene list		 [Coexpressed gene list for SHMT]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 100305380      
Refseq ID (protein) NP_001355691.1 


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