[←][→] osa   Os12g0409000 Gene
functional annotation
Function   serine hydroxymethyltransferase 4  
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (1356 genes)  RCA  
GO:0009536 [list] [network] plastid  (1715 genes)  RCA  
GO MF
KEGG osa00260 [list] [network] Glycine, serine and threonine metabolism (68 genes)
osa00460 [list] [network] Cyanoamino acid metabolism (54 genes)
osa00630 [list] [network] Glyoxylate and dicarboxylate metabolism (76 genes)
osa00670 [list] [network] One carbon pool by folate (16 genes)
osa01200 [list] [network] Carbon metabolism (270 genes)
osa01230 [list] [network] Biosynthesis of amino acids (237 genes)
Protein XP_015620540.1 
BLAST XP_015620540.1 
Orthologous [Ortholog page] EDA36 (ath)  SHM4 (ath)  LOC4350456 (osa)  LOC11415840 (mtr)  LOC11442479 (mtr)  LOC100192461 (zma)  LOC100248779 (vvi)  SHMT (gma)  LOC100815417 (gma)  LOC101256090 (sly)  LOC101259725 (sly)  LOC103833148 (bra)  LOC103863581 (bra) 
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for XP_015620540.1)
Subcellular
localization
TargetP
chlo 9,  mito 4  (predict for XP_015620540.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 6
osa00300 Lysine biosynthesis 3
osa00240 Pyrimidine metabolism 3
osa00230 Purine metabolism 2
osa00250 Alanine, aspartate and glutamate metabolism 2
Genes directly connected with LOC4352058 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.5 LOC4325739 uridine 5'-monophosphate synthase-like [detail] 4325739
6.9 LOC4332563 probable LL-diaminopimelate aminotransferase, chloroplastic [detail] 4332563
6.6 LOC9272292 50S ribosomal protein L25 [detail] 9272292
3.6 LOC107276097 uncharacterized LOC107276097 [detail] 107276097
Coexpressed
gene list		 [Coexpressed gene list for LOC4352058]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 4352058      
Refseq ID (protein) XP_015620540.1 


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