[←][→] bra   103872879 Gene
functional annotation
Function   DEAD-box ATP-dependent RNA helicase 42  
GO BP
GO CC
GO MF
KEGG brp03040 [list] [network] Spliceosome (287 genes)
Protein XP_009149570.1  XP_009149571.1  XP_009149572.1 
BLAST XP_009149570.1  XP_009149571.1  XP_009149572.1 
Orthologous [Ortholog page] AT3G09620 (ath)  AT1G20920 (ath)  LOC4344682 (osa)  LOC4344716 (osa)  LOC7471740 (ppo)  LOC7494729 (ppo)  LOC11418819 (mtr)  LOC100262258 (vvi)  LOC100381523 (zma)  LOC100784306 (gma)  LOC100806467 (gma)  LOC101254580 (sly)  LOC103870532 (bra) 
Subcellular
localization
wolf
nucl 9,  cyto 1  (predict for XP_009149570.1)
nucl 9,  cyto 1  (predict for XP_009149571.1)
nucl 9,  cyto 1  (predict for XP_009149572.1)
Subcellular
localization
TargetP
other 9  (predict for XP_009149570.1)
other 9  (predict for XP_009149571.1)
other 9  (predict for XP_009149572.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03018 RNA degradation 2
Genes directly connected with LOC103872879 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.2 LOC103830490 nuclear-pore anchor-like [detail] 103830490
8.2 LOC103862399 protein MODIFIER OF SNC1 1 [detail] 103862399
8.1 LOC103841344 TATA-binding protein-associated factor BTAF1 [detail] 103841344
7.6 LOC103864815 uncharacterized LOC103864815 [detail] 103864815
7.4 LOC103869095 uncharacterized LOC103869095 [detail] 103869095
7.4 LOC103831869 transcription initiation factor TFIID subunit 2 [detail] 103831869
7.3 LOC103869187 uncharacterized LOC103869187 [detail] 103869187
7.3 LOC103869430 pre-mRNA-processing protein 40B [detail] 103869430
7.2 LOC103869658 protein NRDE2 homolog [detail] 103869658
7.1 LOC103875345 serine/threonine-protein kinase prp4 [detail] 103875345
7.0 LOC103875195 zinc finger CCCH domain-containing protein 41-like [detail] 103875195
6.9 LOC103850838 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7 [detail] 103850838
6.3 LOC103838745 histone-lysine N-methyltransferase ATXR7 [detail] 103838745
Coexpressed
gene list		 [Coexpressed gene list for LOC103872879]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 103872879      
Refseq ID (protein) XP_009149570.1 
XP_009149571.1 
XP_009149572.1 


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