[←][→] ath   AT1G20920 Gene
functional annotation
Function   P-loop containing nucleoside triphosphate hydrolases superfamily protein  
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (172 genes)  IBA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA ISM  
GO MF
GO:0003724 [list] [network] RNA helicase activity  (75 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IBA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
KEGG ath03040 [list] [network] Spliceosome (192 genes)
Protein NP_001077571.1  NP_001322011.1  NP_001322012.1  NP_001322013.1  NP_001322014.1  NP_001322015.1  NP_173516.1 
BLAST NP_001077571.1  NP_001322011.1  NP_001322012.1  NP_001322013.1  NP_001322014.1  NP_001322015.1  NP_173516.1 
Orthologous [Ortholog page] AT3G09620 (ath)  LOC4344682 (osa)  LOC4344716 (osa)  LOC7471740 (ppo)  LOC7494729 (ppo)  LOC11418819 (mtr)  LOC100262258 (vvi)  LOC100381523 (zma)  LOC100784306 (gma)  LOC100806467 (gma)  LOC101254580 (sly)  LOC103870532 (bra)  LOC103872879 (bra) 
Subcellular
localization
wolf
cyto 6,  chlo 1,  nucl 1,  plas 1,  pero 1,  chlo_mito 1,  cysk_nucl 1  (predict for NP_001077571.1)
nucl 9  (predict for NP_001322011.1)
nucl 9  (predict for NP_001322012.1)
nucl 9  (predict for NP_001322013.1)
nucl 9  (predict for NP_001322014.1)
nucl 9  (predict for NP_001322015.1)
nucl 9  (predict for NP_173516.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001077571.1)
other 9  (predict for NP_001322011.1)
other 9  (predict for NP_001322012.1)
other 9  (predict for NP_001322013.1)
other 9  (predict for NP_001322014.1)
other 9  (predict for NP_001322015.1)
other 9  (predict for NP_173516.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 10
Genes directly connected with AT1G20920 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
13.4 AT3G25840 Protein kinase superfamily protein [detail] 822178
11.1 ATU2AF65A U2 snRNP auxilliary factor, large subunit, splicing factor [detail] 829822
9.7 DOT2 SART-1 family [detail] 831541
7.8 AT4G12670 Homeodomain-like superfamily protein [detail] 826879
7.4 AT4G36520 Chaperone DnaJ-domain superfamily protein [detail] 829804
Coexpressed
gene list		 [Coexpressed gene list for AT1G20920]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262851_at
262851_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262851_at
262851_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262851_at
262851_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838685      
Refseq ID (protein) NP_001077571.1 
NP_001322011.1 
NP_001322012.1 
NP_001322013.1 
NP_001322014.1 
NP_001322015.1 
NP_173516.1 


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