[←][→] ppo   POPTR_002G003600v3 Gene
functional annotation
Function   DEAD-box ATP-dependent RNA helicase 42  
GO BP
GO CC
GO MF
KEGG pop03040 [list] [network] Spliceosome (121 genes)
Protein XP_024449877.1  XP_024449878.1  XP_024449879.1  XP_024449880.1  XP_024449881.1 
BLAST XP_024449877.1  XP_024449878.1  XP_024449879.1  XP_024449880.1  XP_024449881.1 
Orthologous [Ortholog page] AT3G09620 (ath)  AT1G20920 (ath)  LOC4344682 (osa)  LOC4344716 (osa)  LOC7494729 (ppo)  LOC11418819 (mtr)  LOC100262258 (vvi)  LOC100381523 (zma)  LOC100784306 (gma)  LOC100806467 (gma)  LOC101254580 (sly)  LOC103870532 (bra)  LOC103872879 (bra) 
Subcellular
localization
wolf
nucl 9,  cyto 1  (predict for XP_024449877.1)
nucl 9,  cyto 1  (predict for XP_024449878.1)
nucl 9,  cyto 1  (predict for XP_024449879.1)
nucl 9,  cyto 1  (predict for XP_024449880.1)
cyto 6,  nucl 3,  cyto_pero 3,  cyto_E.R. 3,  cyto_plas 3  (predict for XP_024449881.1)
Subcellular
localization
TargetP
other 9  (predict for XP_024449877.1)
other 9  (predict for XP_024449878.1)
other 9  (predict for XP_024449879.1)
other 9  (predict for XP_024449880.1)
other 6,  mito 4  (predict for XP_024449881.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
ppo03015 mRNA surveillance pathway 3
ppo03013 RNA transport 2
Genes directly connected with LOC7471740 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.0 LOC7469047 biorientation of chromosomes in cell division protein 1-like 1 [detail] 7469047
7.5 LOC7459056 RNA-binding protein 25 [detail] 7459056
7.1 LOC7462542 probable splicing factor 3A subunit 1 [detail] 7462542
6.0 LOC7467449 exocyst complex component SEC6 [detail] 7467449
5.8 LOC7495842 myb-like protein X [detail] 7495842
5.6 LOC7490860 U1 small nuclear ribonucleoprotein A [detail] 7490860
4.7 LOC7494905 uridylate kinase [detail] 7494905
Coexpressed
gene list		 [Coexpressed gene list for LOC7471740]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 7471740      
Refseq ID (protein) XP_024449877.1 
XP_024449878.1 
XP_024449879.1 
XP_024449880.1 
XP_024449881.1 


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