[←][→] ppo   POPTR_008G056600v3 Gene
functional annotation
Function   serine/arginine-rich SC35-like splicing factor SCL30  
GO BP
GO CC
GO MF
KEGG pop03040 [list] [network] Spliceosome (121 genes)
Protein XP_006379596.2  XP_024461751.1  XP_024461752.1  XP_024461753.1  XP_024461754.1  XP_024461756.1 
BLAST XP_006379596.2  XP_024461751.1  XP_024461752.1  XP_024461753.1  XP_024461754.1  XP_024461756.1 
Orthologous [Ortholog page] SCL30A (ath)  SCL30 (ath)  LOC4328900 (osa)  LOC4344009 (osa)  LOC7457708 (ppo)  LOC7458142 (ppo)  LOC9268085 (osa)  LOC11432730 (mtr)  LOC11433183 (mtr)  LOC25483590 (mtr)  LOC100193374 (zma)  LOC100193775 (zma)  LOC100258210 (vvi)  LOC100259677 (vvi)  LOC100263951 (vvi)  LOC100283836 (zma)  LOC100285628 (zma)  LOC100775883 (gma)  LOC100779321 (gma)  LOC100792397 (gma)  LOC100804294 (gma)  LOC100816913 (gma)  LOC101259473 (sly)  LOC103628634 (zma)  LOC103849767 (bra)  LOC103863157 (bra)  LOC103870289 (bra)  LOC103871046 (bra)  LOC107275752 (osa) 
Subcellular
localization
wolf
nucl 4,  chlo 3,  mito 1,  extr 1  (predict for XP_006379596.2)
nucl 4,  chlo 3,  mito 1,  extr 1  (predict for XP_024461751.1)
nucl 4,  chlo 3,  mito 1,  extr 1  (predict for XP_024461752.1)
nucl 4,  chlo 3,  mito 1,  extr 1  (predict for XP_024461753.1)
nucl 4,  chlo 3,  mito 1,  extr 1  (predict for XP_024461754.1)
nucl 4,  chlo 3,  mito 1,  extr 1  (predict for XP_024461756.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_006379596.2)
mito 6  (predict for XP_024461751.1)
mito 6  (predict for XP_024461752.1)
mito 6  (predict for XP_024461753.1)
mito 6  (predict for XP_024461754.1)
mito 6  (predict for XP_024461756.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 7
ppo03013 RNA transport 2
ppo03018 RNA degradation 2
Genes directly connected with LOC7467550 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.9 LOC7494499 PHD finger protein ALFIN-LIKE 2 [detail] 7494499
5.4 LOC7491308 probable U6 snRNA-associated Sm-like protein LSm4 [detail] 7491308
5.0 LOC7459201 putative uncharacterized protein DDB_G0268364 [detail] 7459201
2.9 LOC7494560 ultraviolet-B receptor UVR8 [detail] 7494560
Coexpressed
gene list		 [Coexpressed gene list for LOC7467550]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 7467550      
Refseq ID (protein) XP_006379596.2 
XP_024461751.1 
XP_024461752.1 
XP_024461753.1 
XP_024461754.1 
XP_024461756.1 


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