[←][→] ppo   POPTR_019G077500v3 Gene
functional annotation
Function   regulator of nonsense transcripts UPF3  
GO BP
GO CC
GO MF
KEGG pop03013 [list] [network] RNA transport (101 genes)
pop03015 [list] [network] mRNA surveillance pathway (75 genes)
Protein XP_002325958.2  XP_024447168.1  XP_024447169.1  XP_024447170.1 
BLAST XP_002325958.2  XP_024447168.1  XP_024447169.1  XP_024447170.1 
Orthologous [Ortholog page] UPF3 (ath)  LOC4335928 (osa)  LOC11419393 (mtr)  LOC11430328 (mtr)  LOC100795376 (gma)  LOC100798866 (gma)  LOC100799816 (gma)  LOC100801152 (gma)  LOC100852735 (vvi)  LOC101263168 (sly)  LOC101264766 (sly)  LOC103641667 (zma)  LOC103646424 (zma)  LOC103833613 (bra)  LOC103840043 (bra)  LOC103868862 (bra) 
Subcellular
localization
wolf
nucl 9,  chlo 1  (predict for XP_002325958.2)
nucl 9,  chlo 1  (predict for XP_024447168.1)
nucl 9,  chlo 1  (predict for XP_024447169.1)
nucl 9,  chlo 1  (predict for XP_024447170.1)
Subcellular
localization
TargetP
mito 4  (predict for XP_002325958.2)
mito 4  (predict for XP_024447168.1)
mito 4  (predict for XP_024447169.1)
mito 4  (predict for XP_024447170.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03013 RNA transport 2
ppo00564 Glycerophospholipid metabolism 2
ppo04070 Phosphatidylinositol signaling system 2
Genes directly connected with LOC7475778 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
3.8 LOC7481418 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 [detail] 7481418
3.7 LOC7493863 chromo domain-containing protein LHP1 [detail] 7493863
3.6 LOC7466082 phosphoinositide phosphatase SAC8 [detail] 7466082
Coexpressed
gene list		 [Coexpressed gene list for LOC7475778]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 7475778      
Refseq ID (protein) XP_002325958.2 
XP_024447168.1 
XP_024447169.1 
XP_024447170.1 


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