[←][→] ppo   POPTR_010G145900v3 Gene
functional annotation
Function   phytochrome B  
GO BP
GO CC
GO MF
KEGG pop04712 [list] [network] Circadian rhythm - plant (25 genes)
Protein XP_002314949.2  XP_006378543.1  XP_024465937.1 
BLAST XP_002314949.2  XP_006378543.1  XP_024465937.1 
Orthologous [Ortholog page] PHYB (ath)  PHYD (ath)  PHYE (ath)  LOC4332623 (osa)  LOC7485902 (ppo)  LOC11417317 (mtr)  LOC11420025 (mtr)  LOC100261882 (vvi)  PHYE (vvi)  LOC100381811 (zma)  LOC100383702 (zma)  PHYB (gma)  PHYE2 (gma)  PHYE1 (gma)  PHYE (sly)  PHYB1 (sly)  PHYB2 (sly)  LOC103856075 (bra)  LOC103869720 (bra) 
Subcellular
localization
wolf
chlo 6,  nucl 1,  golg 1,  mito 1,  vacu 1,  cyto_nucl 1,  cysk_nucl 1,  nucl_plas 1,  golg_plas 1  (predict for XP_002314949.2)
chlo 5,  nucl 3,  mito 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_006378543.1)
chlo 5,  nucl 2,  golg 1,  mito 1,  vacu 1,  golg_plas 1  (predict for XP_024465937.1)
Subcellular
localization
TargetP
mito 5,  chlo 4  (predict for XP_002314949.2)
mito 5,  chlo 4  (predict for XP_006378543.1)
mito 5,  chlo 4  (predict for XP_024465937.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 3
Genes directly connected with LOC7485825 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
4.9 LOC7458653 uncharacterized protein sll0005 [detail] 7458653
4.5 LOC7485902 phytochrome B [detail] 7485902
4.3 LOC7491716 homeobox-DDT domain protein RLT2 [detail] 7491716
3.9 LOC7467989 exosome complex component RRP45B [detail] 7467989
Coexpressed
gene list		 [Coexpressed gene list for LOC7485825]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 7485825      
Refseq ID (protein) XP_002314949.2 
XP_006378543.1 
XP_024465937.1 


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