[][] ppo   POPTR_008G105200v3 Gene
functional annotation
Function   phytochrome B
GO BP
GO CC
GO MF
KEGG pop04712 [list] [network] Circadian rhythm - plant (25 genes)
Protein XP_024462891.1  XP_024462892.1  XP_024462893.1 
BLAST XP_024462891.1  XP_024462892.1  XP_024462893.1 
Orthologous [Ortholog page] PHYB (ath)PHYD (ath)PHYE (ath)LOC4332623 (osa)LOC7485825 (ppo)LOC11417317 (mtr)LOC11420025 (mtr)LOC100261882 (vvi)PHYE (vvi)LOC100381811 (zma)LOC100383702 (zma)PHYB (gma)PHYE2 (gma)PHYE1 (gma)PHYE (sly)PHYB1 (sly)PHYB2 (sly)LOC103856075 (bra)LOC103869720 (bra)
Subcellular
localization
wolf
chlo 4,  nucl 3,  plas 1,  cyto_nucl 1,  cysk_nucl 1  (predict for XP_024462891.1)
chlo 5,  mito 4,  nucl 1  (predict for XP_024462892.1)
chlo 5,  mito 4,  nucl 1  (predict for XP_024462893.1)
Subcellular
localization
TargetP
mito 6,  chlo 4  (predict for XP_024462891.1)
mito 6,  chlo 4  (predict for XP_024462892.1)
mito 6,  chlo 4  (predict for XP_024462893.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 4
Genes directly connected with LOC7485902 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
4.9 LOC7488583 phosphoglucan, water dikinase, chloroplastic [detail] 7488583
4.6 LOC7468530 E3 ubiquitin-protein ligase COP1 [detail] 7468530
4.5 LOC7485825 phytochrome B [detail] 7485825
4.4 LOC7491114 BEL1-like homeodomain protein 1 [detail] 7491114
3.5 LOC7479208 uncharacterized LOC7479208 [detail] 7479208
3.1 LOC7478509 uncharacterized LOC7478509 [detail] 7478509
Coexpressed
gene list
[Coexpressed gene list for LOC7485902]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 7485902    
Refseq ID (protein) XP_024462891.1 
XP_024462892.1 
XP_024462893.1 


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