[←][→] ath   AT2G02470 Gene
functional annotation
Function   alfin-like 6  
GO BP
GO:0048767 [list] [network] root hair elongation  (66 genes)  IMP  
GO:0016036 [list] [network] cellular response to phosphate starvation  (110 genes)  IMP  
GO:0055065 [list] [network] metal ion homeostasis  (217 genes)  IMP  
GO:0006325 [list] [network] chromatin organization  (338 genes)  IEA  
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0035064 [list] [network] methylated histone binding  (14 genes)  ISS  
GO:0042393 [list] [network] histone binding  (72 genes)  IEA  
GO:0044212 [list] [network] transcription regulatory region DNA binding  (871 genes)  IPI  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001189502.1  NP_001323925.1  NP_178351.1 
BLAST NP_001189502.1  NP_001323925.1  NP_178351.1 
Orthologous [Ortholog page] AL3 (ath)  AL5 (ath)  AL4 (ath)  AL7 (ath)  LOC4324896 (osa)  LOC4335954 (osa)  LOC4338816 (osa)  LOC4343868 (osa)  LOC4350183 (osa)  LOC7478178 (ppo)  LOC7497594 (ppo)  LOC9269003 (osa)  LOC11433421 (mtr)  LOC25481987 (mtr)  LOC25486461 (mtr)  LOC25494361 (mtr)  LOC25500530 (mtr)  LOC100170695 (gma)  LOC100170696 (gma)  PHD4 (gma)  LOC100170698 (gma)  PHD6 (gma)  LOC100170700 (gma)  LOC100192074 (zma)  LOC100247536 (vvi)  LOC100259036 (vvi)  LOC100263503 (vvi)  LOC100273857 (zma)  LOC100283100 (zma)  LOC100283532 (zma)  LOC100283630 (zma)  LOC100284916 (zma)  fin1 (sly)  LOC100500110 (gma)  LOC100777146 (gma)  LOC100794662 (gma)  LOC100807826 (gma)  LOC100852794 (vvi)  LOC101248114 (sly)  LOC101248299 (sly)  LOC101250743 (sly)  LOC101259267 (sly)  LOC101264911 (sly)  LOC103635648 (zma)  LOC103827517 (bra)  LOC103836071 (bra)  LOC103837114 (bra)  LOC103839442 (bra)  LOC103842964 (bra)  LOC103845671 (bra)  LOC103848022 (bra)  LOC103851351 (bra) 
Subcellular
localization
wolf
chlo 5,  cyto 2,  mito 1,  extr 1,  pero 1,  cysk 1  (predict for NP_001189502.1)
nucl 4,  cyto 2,  chlo 1,  plas 1,  extr 1,  pero 1,  cysk 1,  cysk_plas 1  (predict for NP_001323925.1)
chlo 6,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for NP_178351.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001189502.1)
other 8  (predict for NP_001323925.1)
other 8  (predict for NP_178351.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03013 RNA transport 2
ath03015 mRNA surveillance pathway 2
Genes directly connected with AL6 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.6 CBP20 CAP-binding protein 20 [detail] 834443
5.5 AT5G22080 Chaperone DnaJ-domain superfamily protein [detail] 832269
5.2 AL7 alfin-like 7 [detail] 838013
Coexpressed
gene list		 [Coexpressed gene list for AL6]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
266180_at
266180_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
266180_at
266180_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
266180_at
266180_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 814776      
Refseq ID (protein) NP_001189502.1 
NP_001323925.1 
NP_178351.1 


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