[←][→] ath   AT3G42790 Gene
functional annotation
Function   alfin-like 3  
GO BP
GO:0006325 [list] [network] chromatin organization  (338 genes)  IEA  
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0035064 [list] [network] methylated histone binding  (14 genes)  ISS  
GO:0042393 [list] [network] histone binding  (72 genes)  IEA  
GO:0044212 [list] [network] transcription regulatory region DNA binding  (871 genes)  IPI  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG
Protein NP_189865.1 
BLAST NP_189865.1 
Orthologous [Ortholog page] AL6 (ath)  AL5 (ath)  AL4 (ath)  AL7 (ath)  LOC4324896 (osa)  LOC4335954 (osa)  LOC4338816 (osa)  LOC4343868 (osa)  LOC4350183 (osa)  LOC7478178 (ppo)  LOC7497594 (ppo)  LOC9269003 (osa)  LOC11433421 (mtr)  LOC25481987 (mtr)  LOC25486461 (mtr)  LOC25494361 (mtr)  LOC25500530 (mtr)  LOC100170695 (gma)  LOC100170696 (gma)  PHD4 (gma)  LOC100170698 (gma)  PHD6 (gma)  LOC100170700 (gma)  LOC100192074 (zma)  LOC100247536 (vvi)  LOC100259036 (vvi)  LOC100263503 (vvi)  LOC100273857 (zma)  LOC100283100 (zma)  LOC100283532 (zma)  LOC100283630 (zma)  LOC100284916 (zma)  fin1 (sly)  LOC100500110 (gma)  LOC100777146 (gma)  LOC100794662 (gma)  LOC100807826 (gma)  LOC100852794 (vvi)  LOC101248114 (sly)  LOC101248299 (sly)  LOC101250743 (sly)  LOC101259267 (sly)  LOC101264911 (sly)  LOC103635648 (zma)  LOC103827517 (bra)  LOC103836071 (bra)  LOC103837114 (bra)  LOC103839442 (bra)  LOC103842964 (bra)  LOC103845671 (bra)  LOC103848022 (bra)  LOC103851351 (bra) 
Subcellular
localization
wolf
chlo 7,  mito 2  (predict for NP_189865.1)
Subcellular
localization
TargetP
other 8  (predict for NP_189865.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
Genes directly connected with AL3 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.2 AT4G21450 PapD-like superfamily protein [detail] 826300
7.0 AT5G14240 Thioredoxin superfamily protein [detail] 831274
6.7 EMB2769 Cwf15 / Cwc15 cell cycle control family protein [detail] 820510
6.4 EMB2804 tubulin folding cofactor B [detail] 820184
5.9 AL7 alfin-like 7 [detail] 838013
Coexpressed
gene list		 [Coexpressed gene list for AL3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252764_at
252764_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252764_at
252764_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252764_at
252764_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 823316      
Refseq ID (protein) NP_189865.1 


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