[][] ath   AT2G32070 Gene
functional annotation
Function   Polynucleotidyl transferase, ribonuclease H-like superfamily protein
GO BP
GO:0043928 [list] [network] exonucleolytic catabolism of deadenylated mRNA  (16 genes)  IBA  
GO:0017148 [list] [network] negative regulation of translation  (33 genes)  IBA  
GO CC
GO:0030015 [list] [network] CCR4-NOT core complex  (14 genes)  IBA  
GO:0000932 [list] [network] P-body  (56 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA ISM  
GO MF
GO:0004535 [list] [network] poly(A)-specific ribonuclease activity  (19 genes)  IBA  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03018 [list] [network] RNA degradation (113 genes)
Protein NP_565735.1 
BLAST NP_565735.1 
Orthologous [Ortholog page] AT5G10960 (ath)AT1G80780 (ath)LOC4331006 (osa)LOC4347066 (osa)LOC7455670 (ppo)LOC7468678 (ppo)LOC100193739 (zma)LOC100216888 (zma)LOC100248407 (vvi)LOC100250028 (vvi)LOC100255985 (vvi)LOC100282279 (zma)LOC100785970 (gma)LOC100789409 (gma)LOC100798365 (gma)LOC100799461 (gma)LOC101244756 (sly)LOC101256741 (sly)LOC101258664 (sly)LOC103832455 (bra)LOC103846764 (bra)LOC103853216 (bra)LOC103867670 (bra)LOC112420417 (mtr)LOC112421400 (mtr)
Subcellular
localization
wolf
cyto 8,  nucl 1,  extr 1,  cysk 1,  cysk_nucl 1  (predict for NP_565735.1)
Subcellular
localization
TargetP
other 8  (predict for NP_565735.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
ath03013 RNA transport 2
ath04712 Circadian rhythm - plant 2
Genes directly connected with AT2G32070 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
6.4 AT3G12130 KH domain-containing protein / zinc finger (CCCH type) family protein [detail] 820388
6.4 AT5G65860 ankyrin repeat family protein [detail] 836715
6.3 CKB1 casein kinase II beta chain 1 [detail] 834754
6.1 AT2G01710 Chaperone DnaJ-domain superfamily protein [detail] 814700
5.1 ABCI1 non-intrinsic ABC protein 10 [detail] 842633
5.0 UBC3 ubiquitin-conjugating enzyme 3 [detail] 836374
Coexpressed
gene list
[Coexpressed gene list for AT2G32070]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
265676_at
265676_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
265676_at
265676_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
265676_at
265676_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 817767    
Refseq ID (protein) NP_565735.1 


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