[←][→] ath   AT5G10960 Gene
functional annotation
Function   Polynucleotidyl transferase, ribonuclease H-like superfamily protein  
GO BP
GO:0043928 [list] [network] exonucleolytic catabolism of deadenylated mRNA  (16 genes)  IBA  
GO:0017148 [list] [network] negative regulation of translation  (33 genes)  IBA  
GO CC
GO:0030015 [list] [network] CCR4-NOT core complex  (14 genes)  IBA  
GO:0000932 [list] [network] P-body  (56 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA ISM  
GO MF
GO:0004535 [list] [network] poly(A)-specific ribonuclease activity  (19 genes)  IBA  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03018 [list] [network] RNA degradation (113 genes)
Protein NP_196657.1 
BLAST NP_196657.1 
Orthologous [Ortholog page] AT2G32070 (ath)  AT1G80780 (ath)  LOC4331006 (osa)  LOC4347066 (osa)  LOC7455670 (ppo)  LOC7468678 (ppo)  LOC100193739 (zma)  LOC100216888 (zma)  LOC100248407 (vvi)  LOC100250028 (vvi)  LOC100255985 (vvi)  LOC100282279 (zma)  LOC100785970 (gma)  LOC100789409 (gma)  LOC100798365 (gma)  LOC100799461 (gma)  LOC101244756 (sly)  LOC101256741 (sly)  LOC101258664 (sly)  LOC103832455 (bra)  LOC103846764 (bra)  LOC103853216 (bra)  LOC103867670 (bra)  LOC112420417 (mtr)  LOC112421400 (mtr) 
Subcellular
localization
wolf
cyto 8,  nucl 1,  E.R. 1,  golg 1  (predict for NP_196657.1)
Subcellular
localization
TargetP
other 9  (predict for NP_196657.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G10960 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.0 AT1G76920 F-box family protein [detail] 844027
6.3 AT2G17030 F-box SKIP23-like protein (DUF295) [detail] 816206
5.9 AT1G22040 Galactose oxidase/kelch repeat superfamily protein [detail] 838809
5.3 AT4G38060 hypothetical protein [detail] 829962
5.2 CPR1 F-box and associated interaction domains-containing protein [detail] 826869
4.6 AT4G17940 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 827519
4.2 AT3G11690 hypothetical protein [detail] 820341
Coexpressed
gene list		 [Coexpressed gene list for AT5G10960]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250404_at
250404_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250404_at
250404_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250404_at
250404_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830963      
Refseq ID (protein) NP_196657.1 


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