[←][→] ath   AT2G42810 Gene
functional annotation
Function   protein phosphatase 5.2  
GO BP
GO:1902325 [list] [network] negative regulation of chlorophyll biosynthetic process  (1 genes)  IMP  
GO:0010019 [list] [network] chloroplast-nucleus signaling pathway  (9 genes)  IGI  
GO:0010017 [list] [network] red or far-red light signaling pathway  (76 genes)  IMP  
GO:0006913 [list] [network] nucleocytoplasmic transport  (95 genes)  ISS  
GO:0006470 [list] [network] protein dephosphorylation  (133 genes)  IEA  
GO:0046686 [list] [network] response to cadmium ion  (346 genes)  IEP  
GO CC
GO:0031965 [list] [network] nuclear membrane  (42 genes)  IEA  
GO:0030176 [list] [network] integral component of endoplasmic reticulum membrane  (67 genes)  IDA  
GO:0016607 [list] [network] nuclear speck  (86 genes)  IEA  
GO:0005635 [list] [network] nuclear envelope  (121 genes)  IDA  
GO:0009506 [list] [network] plasmodesma  (962 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA IBA IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA IDA ISM ISS  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA  
GO MF
GO:0004722 [list] [network] protein serine/threonine phosphatase activity  (113 genes)  IBA ISS  
GO:0004721 [list] [network] phosphoprotein phosphatase activity  (174 genes)  IDA  
GO:0046906 [list] [network] tetrapyrrole binding  (357 genes)  IDA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001031534.1  NP_001323831.1  NP_001323832.1  NP_001323833.1  NP_565985.1 
BLAST NP_001031534.1  NP_001323831.1  NP_001323832.1  NP_001323833.1  NP_565985.1 
Orthologous [Ortholog page] PP5 (sly)  LOC4338070 (osa)  LOC25490671 (mtr)  LOC100259074 (vvi)  LOC100283669 (zma)  LOC100820099 (gma)  LOC103865967 (bra)  LOC103866664 (bra) 
Subcellular
localization
wolf
plas 5,  E.R. 2,  nucl 1,  cyto 1,  vacu 1,  golg 1,  cyto_nucl 1  (predict for NP_001031534.1)
plas 5,  E.R. 2,  nucl 1,  cyto 1,  vacu 1,  golg 1,  cyto_nucl 1  (predict for NP_001323831.1)
nucl 4,  cysk 4,  cysk_nucl 4  (predict for NP_001323832.1)
nucl 4,  cysk 4,  cysk_nucl 4  (predict for NP_001323833.1)
nucl 4,  cysk 4,  cysk_nucl 4  (predict for NP_565985.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001031534.1)
other 9  (predict for NP_001323831.1)
other 9  (predict for NP_001323832.1)
other 9  (predict for NP_001323833.1)
other 9  (predict for NP_565985.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 RNA transport 4
Genes directly connected with PP5.2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.5 AT3G02200 Proteasome component (PCI) domain protein [detail] 821267
8.2 TIF3H1 translation initiation factor 3 subunit H1 [detail] 837627
6.6 ECT2 evolutionarily conserved C-terminal region 2 [detail] 820548
5.9 BON2 Calcium-dependent phospholipid-binding Copine family protein [detail] 830621
Coexpressed
gene list		 [Coexpressed gene list for PP5.2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
263990_at
263990_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
263990_at
263990_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
263990_at
263990_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 818881      
Refseq ID (protein) NP_001031534.1 
NP_001323831.1 
NP_001323832.1 
NP_001323833.1 
NP_565985.1 


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