[←][→] ath   AT3G47820 Gene
functional annotation
Function   PLANT U-BOX 39  
GO BP
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (434 genes)  IEA  
KEGG
Protein NP_190366.2 
BLAST NP_190366.2 
Orthologous [Ortholog page] AT5G40140 (ath)  AT5G62560 (ath)  PUB38 (ath)  LOC4340611 (osa)  LOC4346948 (osa)  LOC7453750 (ppo)  LOC7458016 (ppo)  LOC7495929 (ppo)  LOC11434906 (mtr)  LOC25489555 (mtr)  LOC100244998 (vvi)  LOC100255877 (vvi)  LOC100281075 (zma)  LOC100281122 (zma)  LOC100775869 (gma)  LOC100784564 (gma)  LOC100798675 (gma)  LOC100815075 (gma)  LOC101243948 (sly)  LOC101258053 (sly)  LOC103637803 (zma)  LOC103837417 (bra)  LOC103855018 (bra)  LOC103855284 (bra)  LOC103863953 (bra)  LOC103873200 (bra)  LOC107276525 (osa) 
Subcellular
localization
wolf
chlo 4,  nucl 3,  mito 1,  cysk 1,  nucl_plas 1  (predict for NP_190366.2)
Subcellular
localization
TargetP
mito 4  (predict for NP_190366.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with PUB39 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.9 EXO70E1 exocyst subunit exo70 family protein E1 [detail] 822601
5.5 AT5G10750 enhanced disease resistance-like protein (DUF1336) [detail] 830942
5.3 AT3G53810 Concanavalin A-like lectin protein kinase family protein [detail] 824548
5.3 AT5G62560 RING/U-box superfamily protein with ARM repeat domain-containing protein [detail] 836376
5.2 AT4G11300 ROH1, putative (DUF793) [detail] 826732
Coexpressed
gene list		 [Coexpressed gene list for PUB39]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 823936      
Refseq ID (protein) NP_190366.2 


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