[←][→] ath   AT5G62560 Gene
functional annotation
Function   RING/U-box superfamily protein with ARM repeat domain-containing protein  
GO BP
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (434 genes)  IEA  
KEGG
Protein NP_201062.1 
BLAST NP_201062.1 
Orthologous [Ortholog page] PUB39 (ath)  AT5G40140 (ath)  PUB38 (ath)  LOC4340611 (osa)  LOC4346948 (osa)  LOC7453750 (ppo)  LOC7458016 (ppo)  LOC7495929 (ppo)  LOC11434906 (mtr)  LOC25489555 (mtr)  LOC100244998 (vvi)  LOC100255877 (vvi)  LOC100281075 (zma)  LOC100281122 (zma)  LOC100775869 (gma)  LOC100784564 (gma)  LOC100798675 (gma)  LOC100815075 (gma)  LOC101243948 (sly)  LOC101258053 (sly)  LOC103637803 (zma)  LOC103837417 (bra)  LOC103855018 (bra)  LOC103855284 (bra)  LOC103863953 (bra)  LOC103873200 (bra)  LOC107276525 (osa) 
Subcellular
localization
wolf
chlo 4,  chlo_mito 4,  mito 2,  nucl 2,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_201062.1)
Subcellular
localization
TargetP
mito 7  (predict for NP_201062.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G62560 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.3 AT3G01400 ARM repeat superfamily protein [detail] 821320
5.3 PUB39 PLANT U-BOX 39 [detail] 823936
5.0 AT4G11300 ROH1, putative (DUF793) [detail] 826732
Coexpressed
gene list		 [Coexpressed gene list for AT5G62560]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 836376      
Refseq ID (protein) NP_201062.1 


The preparation time of this page was 0.2 [sec].