[←][→] ath   AT3G60500 Gene
functional annotation
Function   3'-5'-exoribonuclease family protein  
GO BP
GO:0034473 [list] [network] U1 snRNA 3'-end processing  (4 genes)  IBA  
GO:0034476 [list] [network] U5 snRNA 3'-end processing  (4 genes)  IBA  
GO:0071042 [list] [network] nuclear polyadenylation-dependent mRNA catabolic process  (4 genes)  IBA  
GO:0071038 [list] [network] nuclear polyadenylation-dependent tRNA catabolic process  (7 genes)  IBA  
GO:0000467 [list] [network] exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (8 genes)  IBA  
GO:0071035 [list] [network] nuclear polyadenylation-dependent rRNA catabolic process  (9 genes)  IBA  
GO:0034475 [list] [network] U4 snRNA 3'-end processing  (10 genes)  IBA  
GO:0034427 [list] [network] nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'  (12 genes)  IBA  
GO:0071028 [list] [network] nuclear mRNA surveillance  (14 genes)  IBA  
GO:0043928 [list] [network] exonucleolytic catabolism of deadenylated mRNA  (16 genes)  IBA  
GO:0016075 [list] [network] rRNA catabolic process  (17 genes)  IBA  
GO:0010025 [list] [network] wax biosynthetic process  (23 genes)  IMP  
GO CC
GO:0000177 [list] [network] cytoplasmic exosome (RNase complex)  (12 genes)  IBA  
GO:0000176 [list] [network] nuclear exosome (RNase complex)  (13 genes)  IBA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA ISM  
GO MF
GO:0000175 [list] [network] 3'-5'-exoribonuclease activity  (32 genes)  IGI ISS  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IEA  
KEGG ath03018 [list] [network] RNA degradation (113 genes)
Protein NP_001190143.1  NP_001327293.1  NP_191609.1  NP_974466.1 
BLAST NP_001190143.1  NP_001327293.1  NP_191609.1  NP_974466.1 
Orthologous [Ortholog page] RRP45a (ath)  LOC4329627 (osa)  LOC7467989 (ppo)  LOC11441855 (mtr)  LOC25483959 (mtr)  LOC100265860 (vvi)  LOC100384304 (zma)  LOC100780196 (gma)  LOC100802751 (gma)  LOC101263517 (sly)  LOC103830261 (bra)  LOC103841899 (bra) 
Subcellular
localization
wolf
cyto 5,  chlo 2,  nucl 2  (predict for NP_001190143.1)
cyto 6,  nucl 2,  chlo 1,  mito 1,  pero 1,  chlo_mito 1  (predict for NP_001327293.1)
cyto 5,  chlo 2,  nucl 2  (predict for NP_191609.1)
cyto 5,  chlo 2,  nucl 2  (predict for NP_974466.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001190143.1)
other 7  (predict for NP_001327293.1)
other 7  (predict for NP_191609.1)
other 7  (predict for NP_974466.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 5
Genes directly connected with CER7 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.1 AT5G50310 Galactose oxidase/kelch repeat superfamily protein [detail] 835096
7.9 AT2G40430 Nop53 protein [detail] 818636
7.7 AT4G28200 U3 small nucleolar RNA-associated-like protein [detail] 828935
6.4 AT5G43720 rRNA-processing EFG1-like protein (DUF2361) [detail] 834392
4.2 SQN peptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamase [detail] 816074
Coexpressed
gene list		 [Coexpressed gene list for CER7]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 825221      
Refseq ID (protein) NP_001190143.1 
NP_001327293.1 
NP_191609.1 
NP_974466.1 


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