[←][→] ath   AT4G16890 Gene
functional annotation
Function   TIR-NBS-LRR class disease resistance protein  
GO BP
GO:0009862 [list] [network] systemic acquired resistance, salicylic acid mediated signaling pathway  (15 genes)  IMP  
GO:0009816 [list] [network] defense response to bacterium, incompatible interaction  (43 genes)  NAS  
GO:0042742 [list] [network] defense response to bacterium  (399 genes)  IGI IMP  
GO:0009733 [list] [network] response to auxin  (407 genes)  IGI  
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (877 genes)  IEA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA ISM  
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (19648 genes)  IDA  
GO MF
GO:0043531 [list] [network] ADP binding  (127 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
GO:0000166 [list] [network] nucleotide binding  (2618 genes)  ISS  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001319970.1  NP_001329719.1  NP_001329720.1  NP_001329721.1  NP_001329722.1 
BLAST NP_001319970.1  NP_001329719.1  NP_001329720.1  NP_001329721.1  NP_001329722.1 
Orthologous [Ortholog page] AT2G14080 (ath)  AT2G16870 (ath)  AT3G04210 (ath)  AT3G04220 (ath)  AT3G44400 (ath)  AT3G44670 (ath)  AT4G08450 (ath)  AT4G11170 (ath)  AT4G14370 (ath)  RPP4 (ath)  AT4G16900 (ath)  AT4G16920 (ath)  AT4G16940 (ath)  RPP5 (ath)  AT4G16960 (ath)  AT5G11250 (ath)  AT5G17970 (ath)  AT5G18350 (ath)  AT5G18360 (ath)  AT5G18370 (ath)  AT5G22690 (ath)  AT5G38340 (ath)  AT5G38850 (ath)  AT5G40060 (ath)  AT5G40910 (ath)  AT5G41540 (ath)  AT5G41550 (ath)  AT5G41740 (ath)  AT5G41750 (ath)  TAO1 (ath)  AT5G46260 (ath)  AT5G46270 (ath)  AT5G46450 (ath)  RPS6 (ath)  AT5G46490 (ath)  AT5G46510 (ath)  AT5G46520 (ath)  AT5G49140 (ath)  AT5G51630 (ath)  AT5G58120 (ath)  AT1G31540 (ath)  WRR4 (ath)  AT1G56520 (ath)  AT1G56540 (ath)  AT1G63730 (ath)  AT1G63740 (ath)  AT1G63750 (ath)  AT1G63870 (ath)  AT1G63880 (ath)  RLM1 (ath)  AT1G65850 (ath)  AT1G63860 (ath)  LOC103827870 (bra)  LOC103828261 (bra)  RGA9 (bra)  LOC103831137 (bra)  LOC103834349 (bra)  LOC103838097 (bra)  LOC103838106 (bra)  LOC103838107 (bra)  LOC103838108 (bra)  LOC103838111 (bra)  LOC103838316 (bra)  LOC103838330 (bra)  LOC103838480 (bra)  LOC103839222 (bra)  LOC103839595 (bra)  LOC103839607 (bra)  LOC103839608 (bra)  LOC103841070 (bra)  LOC103845886 (bra)  LOC103846927 (bra)  LOC103848010 (bra)  LOC103848931 (bra)  LOC103850223 (bra)  LOC103850388 (bra)  LOC103851141 (bra)  LOC103852503 (bra)  LOC103853706 (bra)  LOC103853710 (bra)  LOC103853713 (bra)  LOC103853747 (bra)  LOC103854248 (bra)  LOC103855905 (bra)  LOC103855958 (bra)  LOC103856441 (bra)  LOC103857384 (bra)  LOC103859130 (bra)  LOC103860884 (bra)  LOC103860885 (bra)  LOC103864117 (bra)  LOC103864602 (bra)  LOC103865164 (bra)  LOC108871093 (bra) 
Subcellular
localization
wolf
nucl 5,  cyto 4,  cysk 1,  golg 1  (predict for NP_001319970.1)
nucl 5,  cyto 4,  cysk 1,  golg 1  (predict for NP_001329719.1)
nucl 5,  cyto 4,  cysk 1,  golg 1  (predict for NP_001329720.1)
nucl 5,  cyto 4,  cysk 1,  golg 1  (predict for NP_001329721.1)
cyto 5,  chlo 2,  nucl 1,  plas 1,  cysk 1,  cysk_plas 1  (predict for NP_001329722.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001319970.1)
other 6,  mito 3  (predict for NP_001329719.1)
other 8  (predict for NP_001329720.1)
other 6,  mito 3  (predict for NP_001329721.1)
other 6,  scret 3  (predict for NP_001329722.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with SNC1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
17.0 RPP4 Disease resistance protein (TIR-NBS-LRR class) family [detail] 827395
16.6 RPP5 Disease resistance protein (TIR-NBS-LRR class) family [detail] 827403
10.3 AT4G16857 disease resistance protein (TIR-NBS-LRR class) family protein [detail] 28720138
9.3 AT4G16960 disease resistance protein (TIR-NBS-LRR class) [detail] 827404
7.5 AT4G16920 Disease resistance protein (TIR-NBS-LRR class) family [detail] 827400
7.5 AT4G16880 Leucine-rich repeat (LRR) family protein [detail] 827396
6.7 AT1G63880 Disease resistance protein (TIR-NBS-LRR class) family [detail] 842692
6.7 AT4G16957 SUPPRESSOR OF, CONSTITUTIVE protein [detail] 28720140
6.1 AT1G69550 disease resistance protein (TIR-NBS-LRR class) [detail] 843291
5.1 AT4G16900 Disease resistance protein (TIR-NBS-LRR class) family [detail] 827399
4.6 AT5G46520 Disease resistance protein (TIR-NBS-LRR class) family [detail] 834695
Coexpressed
gene list		 [Coexpressed gene list for SNC1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245451_at
245451_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245451_at
245451_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245451_at
245451_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827397      
Refseq ID (protein) NP_001319970.1 
NP_001329719.1 
NP_001329720.1 
NP_001329721.1 
NP_001329722.1 


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