ATTED-II : GeneID search result

[←][→] ath AT1G56540 Gene

functional annotation

Function

Disease resistance protein (TIR-NBS-LRR class) family

GO BP

GO:0007165 [list] [network] signal transduction

(1575 genes)

IEA

GO CC

GO:0016021 [list] [network] integral component of membrane	(4803 genes)	IEA
GO:0009507 [list] [network] chloroplast	(5095 genes)	ISM

GO MF

GO:0043531 [list] [network] ADP binding

(127 genes)

IEA

KEGG

Protein

NP_001321319.1 NP_176047.1

BLAST

NP_001321319.1 NP_176047.1

Orthologous

[Ortholog page] AT2G14080 (ath) AT2G16870 (ath) AT3G04210 (ath) AT3G04220 (ath) AT3G44400 (ath) AT3G44670 (ath) AT4G08450 (ath) AT4G11170 (ath) AT4G14370 (ath) RPP4 (ath) SNC1 (ath) AT4G16900 (ath) AT4G16920 (ath) AT4G16940 (ath) RPP5 (ath) AT4G16960 (ath) AT5G11250 (ath) AT5G17970 (ath) AT5G18350 (ath) AT5G18360 (ath) AT5G18370 (ath) AT5G22690 (ath) AT5G38340 (ath) AT5G38850 (ath) AT5G40060 (ath) AT5G40910 (ath) AT5G41540 (ath) AT5G41550 (ath) AT5G41740 (ath) AT5G41750 (ath) TAO1 (ath) AT5G46260 (ath) AT5G46270 (ath) AT5G46450 (ath) RPS6 (ath) AT5G46490 (ath) AT5G46510 (ath) AT5G46520 (ath) AT5G49140 (ath) AT5G51630 (ath) AT5G58120 (ath) AT1G31540 (ath) WRR4 (ath) AT1G56520 (ath) AT1G63730 (ath) AT1G63740 (ath) AT1G63750 (ath) AT1G63870 (ath) AT1G63880 (ath) RLM1 (ath) AT1G65850 (ath) AT1G63860 (ath) LOC103827870 (bra) LOC103828261 (bra) RGA9 (bra) LOC103831137 (bra) LOC103834349 (bra) LOC103838097 (bra) LOC103838106 (bra) LOC103838107 (bra) LOC103838108 (bra) LOC103838111 (bra) LOC103838316 (bra) LOC103838330 (bra) LOC103838480 (bra) LOC103839222 (bra) LOC103839595 (bra) LOC103839607 (bra) LOC103839608 (bra) LOC103841070 (bra) LOC103845886 (bra) LOC103846927 (bra) LOC103848010 (bra) LOC103848931 (bra) LOC103850223 (bra) LOC103850388 (bra) LOC103851141 (bra) LOC103852503 (bra) LOC103853706 (bra) LOC103853710 (bra) LOC103853713 (bra) LOC103853747 (bra) LOC103854248 (bra) LOC103855905 (bra) LOC103855958 (bra) LOC103856441 (bra) LOC103857384 (bra) LOC103859130 (bra) LOC103860884 (bra) LOC103860885 (bra) LOC103864117 (bra) LOC103864602 (bra) LOC103865164 (bra) LOC108871093 (bra)

Subcellular
localization
wolf

nucl 3, cyto 3, cyto_nucl 3, golg 2	(predict for NP_001321319.1)
nucl 4, chlo 2, cyto_nucl 2, plas 1, golg 1, chlo_mito 1, golg_plas 1	(predict for NP_176047.1)

Subcellular
localization
TargetP

other 9	(predict for NP_001321319.1)
mito 6, chlo 3	(predict for NP_176047.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04626	Plant-pathogen interaction	2

Genes directly connected with AT1G56540 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
6.0	AT1G31540	Disease resistance protein (TIR-NBS-LRR class) family	[detail]	840044
5.1	WAKL2	wall associated kinase-like 2	[detail]	838182
5.0	CRK41	cysteine-rich RLK (RECEPTOR-like protein kinase) 41	[detail]	827936

Coexpressed
gene list

[Coexpressed gene list for AT1G56540]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

245654_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

245654_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

245654_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	842107
Refseq ID (protein)	NP_001321319.1
Refseq ID (protein)	NP_176047.1

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