ATTED-II : GeneID search result

[←][→] ath AT4G16920 Gene

functional annotation

Function

Disease resistance protein (TIR-NBS-LRR class) family

GO BP

GO:0007165 [list] [network] signal transduction

(1575 genes)

IEA

GO CC

GO:0009507 [list] [network] chloroplast	(5095 genes)	ISM
GO:0005737 [list] [network] cytoplasm	(14855 genes)	ISM

GO MF

GO:0043531 [list] [network] ADP binding

(127 genes)

IEA

KEGG

Protein

NP_001329036.1 NP_001329037.1 NP_001329038.1 NP_001329039.1 NP_001329040.1 NP_001329041.1 NP_001329042.1 NP_001329043.1 NP_193425.1

BLAST

NP_001329036.1 NP_001329037.1 NP_001329038.1 NP_001329039.1 NP_001329040.1 NP_001329041.1 NP_001329042.1 NP_001329043.1 NP_193425.1

Orthologous

[Ortholog page] AT2G14080 (ath) AT2G16870 (ath) AT3G04210 (ath) AT3G04220 (ath) AT3G44400 (ath) AT3G44670 (ath) AT4G08450 (ath) AT4G11170 (ath) AT4G14370 (ath) RPP4 (ath) SNC1 (ath) AT4G16900 (ath) AT4G16940 (ath) RPP5 (ath) AT4G16960 (ath) AT5G11250 (ath) AT5G17970 (ath) AT5G18350 (ath) AT5G18360 (ath) AT5G18370 (ath) AT5G22690 (ath) AT5G38340 (ath) AT5G38850 (ath) AT5G40060 (ath) AT5G40910 (ath) AT5G41540 (ath) AT5G41550 (ath) AT5G41740 (ath) AT5G41750 (ath) TAO1 (ath) AT5G46260 (ath) AT5G46270 (ath) AT5G46450 (ath) RPS6 (ath) AT5G46490 (ath) AT5G46510 (ath) AT5G46520 (ath) AT5G49140 (ath) AT5G51630 (ath) AT5G58120 (ath) AT1G31540 (ath) WRR4 (ath) AT1G56520 (ath) AT1G56540 (ath) AT1G63730 (ath) AT1G63740 (ath) AT1G63750 (ath) AT1G63870 (ath) AT1G63880 (ath) RLM1 (ath) AT1G65850 (ath) AT1G63860 (ath) LOC103827870 (bra) LOC103828261 (bra) RGA9 (bra) LOC103831137 (bra) LOC103834349 (bra) LOC103838097 (bra) LOC103838106 (bra) LOC103838107 (bra) LOC103838108 (bra) LOC103838111 (bra) LOC103838316 (bra) LOC103838330 (bra) LOC103838480 (bra) LOC103839222 (bra) LOC103839595 (bra) LOC103839607 (bra) LOC103839608 (bra) LOC103841070 (bra) LOC103845886 (bra) LOC103846927 (bra) LOC103848010 (bra) LOC103848931 (bra) LOC103850223 (bra) LOC103850388 (bra) LOC103851141 (bra) LOC103852503 (bra) LOC103853706 (bra) LOC103853710 (bra) LOC103853713 (bra) LOC103853747 (bra) LOC103854248 (bra) LOC103855905 (bra) LOC103855958 (bra) LOC103856441 (bra) LOC103857384 (bra) LOC103859130 (bra) LOC103860884 (bra) LOC103860885 (bra) LOC103864117 (bra) LOC103864602 (bra) LOC103865164 (bra) LOC108871093 (bra)

Subcellular
localization
wolf

nucl 6, cyto_nucl 4, cyto 1	(predict for NP_001329036.1)
nucl 6, cyto_nucl 4, cyto 1	(predict for NP_001329037.1)
nucl 6, cyto_nucl 4, cyto 1	(predict for NP_001329038.1)
nucl 6, cyto_nucl 4, cyto 1	(predict for NP_001329039.1)
nucl 6, cyto_nucl 4, cyto 1	(predict for NP_001329040.1)
nucl 7, cyto_nucl 5, cyto 1	(predict for NP_001329041.1)
nucl 6, cyto_nucl 4, cyto 1	(predict for NP_001329042.1)
nucl 6, cyto_nucl 4, cyto 1	(predict for NP_001329043.1)
nucl 6, cyto_nucl 4, cyto 1	(predict for NP_193425.1)

Subcellular
localization
TargetP

chlo 5, other 4	(predict for NP_001329036.1)
chlo 5, other 4	(predict for NP_001329037.1)
chlo 5, other 4	(predict for NP_001329038.1)
chlo 5, other 4	(predict for NP_001329039.1)
chlo 5, other 4	(predict for NP_001329040.1)
chlo 5, other 4	(predict for NP_001329041.1)
chlo 5, other 4	(predict for NP_001329042.1)
chlo 5, other 4	(predict for NP_001329043.1)
chlo 5, other 4	(predict for NP_193425.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT4G16920 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
11.0	AT4G16857	disease resistance protein (TIR-NBS-LRR class) family protein	[detail]	28720138
7.5	SNC1	TIR-NBS-LRR class disease resistance protein	[detail]	827397
5.6	RPP5	Disease resistance protein (TIR-NBS-LRR class) family	[detail]	827403

Coexpressed
gene list

[Coexpressed gene list for AT4G16920]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

245454_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

245454_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

245454_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	827400
Refseq ID (protein)	NP_001329036.1
	NP_001329037.1
	NP_001329038.1
	NP_001329039.1
	NP_001329040.1
	NP_001329041.1
	NP_001329042.1
	NP_001329043.1
	NP_193425.1

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