[←][→] ath   AT5G27840 Gene
functional annotation
Function   Calcineurin-like metallo-phosphoesterase superfamily protein  
GO BP
GO:0048768 [list] [network] root hair cell tip growth  (23 genes)  IGI  
GO:0009860 [list] [network] pollen tube growth  (129 genes)  IGI  
GO:0006470 [list] [network] protein dephosphorylation  (133 genes)  ISS  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA ISM  
GO MF
GO:0004722 [list] [network] protein serine/threonine phosphatase activity  (113 genes)  IBA IDA IMP ISS  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG ath03015 [list] [network] mRNA surveillance pathway (115 genes)
Protein NP_001330890.1  NP_001330891.1  NP_568501.3  NP_851085.1 
BLAST NP_001330890.1  NP_001330891.1  NP_568501.3  NP_851085.1 
Orthologous [Ortholog page] LOC542269 (zma)  TOPP1 (ath)  TOPP4 (ath)  TOPP9 (ath)  TOPP5 (ath)  TOPP7 (ath)  TOPP6 (ath)  TOPP2 (ath)  TOPP3 (ath)  LOC4326473 (osa)  LOC4331166 (osa)  LOC4332369 (osa)  LOC4340228 (osa)  LOC7458113 (ppo)  LOC7478936 (ppo)  LOC7479289 (ppo)  LOC7487983 (ppo)  LOC11406064 (mtr)  LOC11413712 (mtr)  LOC11419847 (mtr)  LOC11424441 (mtr)  LOC11425683 (mtr)  LOC11431740 (mtr)  LOC11432243 (mtr)  LOC25502117 (mtr)  LOC100191199 (zma)  LOC100216757 (zma)  LOC100217163 (zma)  LOC100240794 (vvi)  LOC100240815 (vvi)  LOC100250219 (vvi)  LOC100256994 (vvi)  LOC100258649 (vvi)  LOC100259840 (vvi)  LOC100263930 (vvi)  LOC100272981 (zma)  LOC100282306 (zma)  LOC100283013 (zma)  LOC100284227 (zma)  LOC100780047 (gma)  LOC100783178 (gma)  LOC100790490 (gma)  LOC100791655 (gma)  LOC100799218 (gma)  LOC100804212 (gma)  LOC100805030 (gma)  LOC100807069 (gma)  LOC100808597 (gma)  LOC100811593 (gma)  LOC100816262 (gma)  LOC101243716 (sly)  LOC101249363 (sly)  LOC101249463 (sly)  LOC101251329 (sly)  LOC101254698 (sly)  LOC101258308 (sly)  LOC101260053 (sly)  LOC103634267 (zma)  LOC103635487 (zma)  LOC103827974 (bra)  LOC103833886 (bra)  LOC103838234 (bra)  LOC103845343 (bra)  LOC103849914 (bra)  LOC103851601 (bra)  LOC103854676 (bra)  LOC103856650 (bra)  LOC103857886 (bra)  LOC103858272 (bra)  LOC103858598 (bra)  LOC103859101 (bra)  LOC103868042 (bra)  LOC103870808 (bra)  LOC103873291 (bra)  LOC103874509 (bra) 
Subcellular
localization
wolf
cyto 6,  nucl 1,  vacu 1,  cysk 1,  golg 1,  nucl_plas 1  (predict for NP_001330890.1)
cyto 6,  nucl 1,  vacu 1,  cysk 1,  golg 1,  nucl_plas 1  (predict for NP_001330891.1)
cyto 6,  nucl 1,  vacu 1,  cysk 1,  golg 1,  nucl_plas 1  (predict for NP_568501.3)
cyto 6,  nucl 1,  extr 1,  vacu 1,  cysk 1,  golg 1,  nucl_plas 1  (predict for NP_851085.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001330890.1)
other 8  (predict for NP_001330891.1)
other 8  (predict for NP_568501.3)
other 8  (predict for NP_851085.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with TOPP8 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.7 PRA1.A1 prenylated RAB acceptor 1.A1 [detail] 831904
6.4 AT4G37880 LisH/CRA/RING-U-box domains-containing protein [detail] 829944
6.4 AT3G60680 DUF641 family protein (DUF641) [detail] 825239
6.0 PIRL3 plant intracellular ras group-related LRR 3 [detail] 837855
5.9 AT2G23780 RING/U-box superfamily protein [detail] 816910
5.8 AT5G40470 RNI-like superfamily protein [detail] 834045
5.8 AT1G77770 forkhead box protein, putative (DUF1644) [detail] 844114
5.4 BPS2 BPS1-like protein [detail] 819216
5.3 PP2CG1 Protein phosphatase 2C family protein [detail] 817935
4.8 AT5G48655 RING/U-box superfamily protein [detail] 834923
Coexpressed
gene list		 [Coexpressed gene list for TOPP8]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246742_at
246742_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246742_at
246742_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246742_at
246742_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 832846      
Refseq ID (protein) NP_001330890.1 
NP_001330891.1 
NP_568501.3 
NP_851085.1 


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