[←][→] ath   AT5G45400 Gene
functional annotation
Function   Replication factor-A protein 1-like protein  
GO BP
GO:0007004 [list] [network] telomere maintenance via telomerase  (11 genes)  IBA  
GO:0006268 [list] [network] DNA unwinding involved in DNA replication  (18 genes)  IBA  
GO:0000723 [list] [network] telomere maintenance  (36 genes)  IBA  
GO:0006289 [list] [network] nucleotide-excision repair  (46 genes)  IBA  
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (68 genes)  IBA  
GO:0006261 [list] [network] DNA-dependent DNA replication  (94 genes)  IBA  
GO:0051321 [list] [network] meiotic cell cycle  (166 genes)  IBA  
GO:0006281 [list] [network] DNA repair  (295 genes)  IBA  
GO CC
GO:0005662 [list] [network] DNA replication factor A complex  (8 genes)  IBA  
GO:0000784 [list] [network] nuclear chromosome, telomeric region  (23 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0043047 [list] [network] single-stranded telomeric DNA binding  (11 genes)  IBA  
GO:0003684 [list] [network] damaged DNA binding  (40 genes)  IBA  
GO:0003697 [list] [network] single-stranded DNA binding  (75 genes)  IBA  
GO:0043565 [list] [network] sequence-specific DNA binding  (796 genes)  IBA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG ath03030 [list] [network] DNA replication (50 genes)
ath03420 [list] [network] Nucleotide excision repair (69 genes)
ath03430 [list] [network] Mismatch repair (39 genes)
ath03440 [list] [network] Homologous recombination (67 genes)
Protein NP_199353.1 
BLAST NP_199353.1 
Orthologous [Ortholog page] RPA1A (ath)  AT4G19130 (ath)  LOC4330902 (osa)  LOC7491902 (ppo)  LOC11407150 (mtr)  LOC25486480 (mtr)  LOC100263039 (vvi)  LOC100268119 (vvi)  LOC100383373 (zma)  LOC100778597 (gma)  LOC100792409 (gma)  LOC101250913 (sly)  LOC101259439 (sly)  LOC103828494 (bra)  LOC103839661 (bra)  LOC103853634 (bra)  LOC103861037 (bra)  LOC112421905 (mtr) 
Subcellular
localization
wolf
nucl 7,  cyto 2  (predict for NP_199353.1)
Subcellular
localization
TargetP
other 7  (predict for NP_199353.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03440 Homologous recombination 7
ath03030 DNA replication 6
ath03430 Mismatch repair 4
ath03420 Nucleotide excision repair 3
Genes directly connected with RPA70C on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.5 CHR1 chromatin remodeling 1 [detail] 836808
6.1 UBP21 ubiquitin-specific protease 21 [detail] 834717
6.1 AT4G19130 Replication factor-A protein 1-like protein [detail] 827651
Coexpressed
gene list		 [Coexpressed gene list for RPA70C]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248940_at
248940_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248940_at
248940_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248940_at
248940_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834576      
Refseq ID (protein) NP_199353.1 


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